View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2498_low_19 (Length: 390)
Name: NF2498_low_19
Description: NF2498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2498_low_19 |
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Alignment Details
Target: chr6 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 71 - 373
Target Start/End: Original strand, 34891373 - 34891675
Alignment:
| Q |
71 |
cctaaattcataatagaagtatcagaagcaaaatcattaacccaatcaacaaacctaaccctaacccaactcctccccaccattgtcaaatcatcccaac |
170 |
Q |
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| T |
34891373 |
cctaaattcataatagaagtatcagaagcaaaatcattaacccaatcaacaaacctaaccctaacccaactcctccccaccattgtcaaatcatcccaac |
34891472 |
T |
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| Q |
171 |
cattagcccgtgtccctatctccaaattccacgttgcggccgtcgcagttggaatctccggtcgaatcttcatcggtgtcaatgtcgaattccctaacct |
270 |
Q |
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| T |
34891473 |
cattagcccgtgtccctatctccaaattccatgttgcggccgtcgcagttggaatctccggtcgaatcttcatcggtgtcaatgtcgaattccctaacct |
34891572 |
T |
|
| Q |
271 |
tccttttcaccataccatccatgcagaacaatttctcttaacaaacctctcccataacaaagaaactcaaattcaataccttgcagtctccgctgcacct |
370 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34891573 |
tccttttcaccataccatccatgcagaacaatttctcttaacaaacctctcccataacaaagaaactcaaattcaataccttgcagtctccgctgcacct |
34891672 |
T |
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| Q |
371 |
tgt |
373 |
Q |
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||| |
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| T |
34891673 |
tgt |
34891675 |
T |
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