View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2498_low_24 (Length: 353)

Name: NF2498_low_24
Description: NF2498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2498_low_24
NF2498_low_24
[»] chr1 (3 HSPs)
chr1 (1-337)||(38644922-38645260)
chr1 (272-327)||(8245427-8245482)
chr1 (287-325)||(42107036-42107074)
[»] chr4 (8 HSPs)
chr4 (273-330)||(34816749-34816806)
chr4 (272-330)||(29061614-29061672)
chr4 (272-325)||(38516118-38516171)
chr4 (272-321)||(53142176-53142225)
chr4 (279-325)||(40608216-40608262)
chr4 (280-325)||(38064753-38064798)
chr4 (281-325)||(34121098-34121142)
chr4 (279-327)||(40835464-40835512)
[»] chr8 (4 HSPs)
chr8 (274-330)||(35561215-35561271)
chr8 (272-330)||(30610849-30610907)
chr8 (282-321)||(10975786-10975825)
chr8 (279-325)||(3771630-3771676)
[»] scaffold0635 (1 HSPs)
scaffold0635 (272-327)||(4323-4378)
[»] chr2 (3 HSPs)
chr2 (272-327)||(10042692-10042747)
chr2 (272-327)||(6407940-6407995)
chr2 (272-325)||(30856621-30856674)
[»] chr6 (6 HSPs)
chr6 (279-325)||(33940958-33941004)
chr6 (282-330)||(9466653-9466701)
chr6 (279-330)||(23126832-23126883)
chr6 (272-330)||(2091378-2091436)
chr6 (272-321)||(278194-278243)
chr6 (273-330)||(19101359-19101416)
[»] chr3 (6 HSPs)
chr3 (272-342)||(50174026-50174096)
chr3 (280-324)||(50293690-50293734)
chr3 (274-330)||(54026694-54026750)
chr3 (279-321)||(19582343-19582385)
chr3 (272-321)||(25750879-25750928)
chr3 (272-325)||(44685373-44685426)
[»] chr7 (2 HSPs)
chr7 (274-325)||(31446663-31446714)
chr7 (282-322)||(38735908-38735948)
[»] chr5 (3 HSPs)
chr5 (272-330)||(28979068-28979126)
chr5 (272-325)||(38734677-38734730)
chr5 (272-324)||(33388724-33388776)


Alignment Details
Target: chr1 (Bit Score: 288; Significance: 1e-161; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 337
Target Start/End: Original strand, 38644922 - 38645260
Alignment:
Q  1 gatagatcaatattacttttgtgtatgtaatcacctctgattctctaaatacacaccataacttcaaaaattgggtattgttcccttttgaaaacataaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38644922 gatagatcaatattacttttgtgtatgtaatcacctctgattctctaaatacacaccataacttcaaaaattgggtattgttcccctttgaaaacataaa 38645021  T
Q  101 tcaatctcaaagaggttgatgaagaaggatatcttgtggtggtggtggtttgccaagtgggaaggtacatgaaaaaggtactttgatagcaaagttagtt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38645022 tcaatctcaaagaggttgatgaagaaggatatcttgtggtggtggtggtttgctaagtgggaaggtacatgaaaaaggtactttgatagcaaagttagtt 38645121  T
Q  201 taagtataatatagtaaaaaggattagtctaaataaaaatattttaacacacactataaacta--nnnnnnnnaaaagataataaaattaaatgatgtca 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||| ||||||||||||||||||||    
T  38645122 taagtataatatagtaaaaaggattagtctaaataaaaatattttaacacacactataaactattttttttttaaaagagaataaaattaaatgatgtca 38645221  T
Q  299 attgatgtgattaaattatttttgtttaatttggttcat 337  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  38645222 attgatgtgattaaattatttttgtttaatttgattcat 38645260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 8245427 - 8245482
Alignment:
Q  272 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaa 327  Q
    |||||| ||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  8245427 aaaagagaataaaattaaatgatgttgattgatgtgatttaattatttttgtttaa 8245482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 325
Target Start/End: Complemental strand, 42107074 - 42107036
Alignment:
Q  287 taaatgatgtcaattgatgtgattaaattatttttgttt 325  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  42107074 taaatgatgttaattgatgtgatttaattatttttgttt 42107036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 273 - 330
Target Start/End: Complemental strand, 34816806 - 34816749
Alignment:
Q  273 aaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaattt 330  Q
    ||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  34816806 aaagagaataaaattaaatgatgtcaattgacgtgactaaattatttttgtttaattt 34816749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 272 - 330
Target Start/End: Original strand, 29061614 - 29061672
Alignment:
Q  272 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaattt 330  Q
    |||||| ||||||| |||||||||||||||||| |||||||||| |||||| |||||||    
T  29061614 aaaagagaataaaagtaaatgatgtcaattgatatgattaaattgtttttgcttaattt 29061672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 38516118 - 38516171
Alignment:
Q  272 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgttt 325  Q
    |||||| ||||||||||||||||||  |||||||||||| ||||| ||||||||    
T  38516118 aaaagagaataaaattaaatgatgttgattgatgtgatttaattaattttgttt 38516171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 53142176 - 53142225
Alignment:
Q  272 aaaagataataaaattaaatgatgtcaattgatgtgattaaattattttt 321  Q
    |||||| ||||||||||||||||||  |||||||||||| ||||||||||    
T  53142176 aaaagaaaataaaattaaatgatgttgattgatgtgatttaattattttt 53142225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 40608262 - 40608216
Alignment:
Q  279 aataaaattaaatgatgtcaattgatgtgattaaattatttttgttt 325  Q
    |||||||||||||||| | ||||||||||||| | ||||||||||||    
T  40608262 aataaaattaaatgatattaattgatgtgattgatttatttttgttt 40608216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 38064753 - 38064798
Alignment:
Q  280 ataaaattaaatgatgtcaattgatgtgattaaattatttttgttt 325  Q
    ||||||||||||||||| |||||||| || ||||||| ||||||||    
T  38064753 ataaaattaaatgatgttaattgatgagactaaattaattttgttt 38064798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 325
Target Start/End: Complemental strand, 34121142 - 34121098
Alignment:
Q  281 taaaattaaatgatgtcaattgatgtgattaaattatttttgttt 325  Q
    ||||| ||||||||||  ||||||||||||| |||||||||||||    
T  34121142 taaaactaaatgatgttgattgatgtgattatattatttttgttt 34121098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 40835512 - 40835464
Alignment:
Q  279 aataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaa 327  Q
    |||||||||||||||| | | ||||||||| ||| ||||||||||||||    
T  40835512 aataaaattaaatgatattagttgatgtgactaatttatttttgtttaa 40835464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 35561271 - 35561215
Alignment:
Q  274 aagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaattt 330  Q
    |||| ||||| |||||||||||||||||||||| |||| ||||||||||||||||||    
T  35561271 aagagaataacattaaatgatgtcaattgatgtaattatattatttttgtttaattt 35561215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 330
Target Start/End: Complemental strand, 30610907 - 30610849
Alignment:
Q  272 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaattt 330  Q
    |||||| ||||||| |||||||| |  |||||||||||||||| |||||||||||||||    
T  30610907 aaaagaaaataaaactaaatgatattgattgatgtgattaaataatttttgtttaattt 30610849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 10975786 - 10975825
Alignment:
Q  282 aaaattaaatgatgtcaattgatgtgattaaattattttt 321  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  10975786 aaaattaaataatgtcaattgatgtgactaaattattttt 10975825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 325
Target Start/End: Original strand, 3771630 - 3771676
Alignment:
Q  279 aataaaattaaatgatgtcaattgatgtgattaaattatttttgttt 325  Q
    ||||||| ||||||||||  ||||||||||||| |||||||||||||    
T  3771630 aataaaactaaatgatgttgattgatgtgattatattatttttgttt 3771676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 327
Target Start/End: Complemental strand, 4378 - 4323
Alignment:
Q  272 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaa 327  Q
    |||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||    
T  4378 aaaagagaataaaattaaatgatttcaatttatgtgattaaattaattttgtttaa 4323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 10042692 - 10042747
Alignment:
Q  272 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaa 327  Q
    |||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||    
T  10042692 aaaagagaataaaattaaatgatttcaatttatgtgattaaattaattttgtttaa 10042747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 327
Target Start/End: Complemental strand, 6407995 - 6407940
Alignment:
Q  272 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaa 327  Q
    |||||| ||||||| ||||||||||  |||||||||||| ||||||||||||||||    
T  6407995 aaaagagaataaaactaaatgatgttgattgatgtgatttaattatttttgtttaa 6407940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 325
Target Start/End: Complemental strand, 30856674 - 30856621
Alignment:
Q  272 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgttt 325  Q
    |||||| || ||||||||||||| | ||||||||||| ||||||||||||||||    
T  30856674 aaaagagaaaaaaattaaatgatattaattgatgtgactaaattatttttgttt 30856621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 325
Target Start/End: Original strand, 33940958 - 33941004
Alignment:
Q  279 aataaaattaaatgatgtcaattgatgtgattaaattatttttgttt 325  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||    
T  33940958 aataaaattaaatgatgttgattgatgtgattaaattatttttgttt 33941004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 330
Target Start/End: Complemental strand, 9466701 - 9466653
Alignment:
Q  282 aaaattaaatgatgtcaattgatgtgattaaattatttttgtttaattt 330  Q
    |||||||||| || ||||||||| | |||||||||||||||||||||||    
T  9466701 aaaattaaataatatcaattgatataattaaattatttttgtttaattt 9466653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 330
Target Start/End: Complemental strand, 23126883 - 23126832
Alignment:
Q  279 aataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaattt 330  Q
    |||||||||||| |||||  |||||||||||| ||||||||||| |||||||    
T  23126883 aataaaattaaacgatgttgattgatgtgatttaattatttttgattaattt 23126832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 330
Target Start/End: Complemental strand, 2091436 - 2091378
Alignment:
Q  272 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaattt 330  Q
    |||||| ||||||||| ||| || | |||||||||||||||||||||||| ||| ||||    
T  2091436 aaaagagaataaaattcaataatattaattgatgtgattaaattatttttattttattt 2091378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 278194 - 278243
Alignment:
Q  272 aaaagataataaaattaaatgatgtcaattgatgtgattaaattattttt 321  Q
    |||||| |||||||| |||||| ||  |||||||||||||||||||||||    
T  278194 aaaagagaataaaatcaaatgacgttgattgatgtgattaaattattttt 278243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 330
Target Start/End: Complemental strand, 19101416 - 19101359
Alignment:
Q  273 aaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaattt 330  Q
    ||||| ||||||||||||| |||||||||||| | |||||||  ||||| ||||||||    
T  19101416 aaagagaataaaattaaataatgtcaattgatataattaaatactttttctttaattt 19101359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 272 - 342
Target Start/End: Original strand, 50174026 - 50174096
Alignment:
Q  272 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaatttggttcatctcac 342  Q
    |||||| ||||||||| ||| |||||||||||||||| |||||||||||| || ||||| |||||| ||||    
T  50174026 aaaagagaataaaattgaataatgtcaattgatgtgactaaattatttttcttaaattttgttcatttcac 50174096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 324
Target Start/End: Complemental strand, 50293734 - 50293690
Alignment:
Q  280 ataaaattaaatgatgtcaattgatgtgattaaattatttttgtt 324  Q
    |||||||||||||||||  |||||||||||| |||||||||||||    
T  50293734 ataaaattaaatgatgttgattgatgtgatttaattatttttgtt 50293690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 330
Target Start/End: Original strand, 54026694 - 54026750
Alignment:
Q  274 aagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaattt 330  Q
    |||| |||||||||| ||||| ||| |||||||||||||||  ||||||||||||||    
T  54026694 aagaaaataaaattagatgatatcatttgatgtgattaaatattttttgtttaattt 54026750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 321
Target Start/End: Complemental strand, 19582385 - 19582343
Alignment:
Q  279 aataaaattaaatgatgtcaattgatgtgattaaattattttt 321  Q
    ||||||||||||||||||  |||||||||||| ||||||||||    
T  19582385 aataaaattaaatgatgttgattgatgtgatttaattattttt 19582343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 25750928 - 25750879
Alignment:
Q  272 aaaagataataaaattaaatgatgtcaattgatgtgattaaattattttt 321  Q
    |||||| ||||||||||||||||||  |||||||| ||| ||||||||||    
T  25750928 aaaagaaaataaaattaaatgatgttgattgatgtaatttaattattttt 25750879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 325
Target Start/End: Complemental strand, 44685426 - 44685373
Alignment:
Q  272 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgttt 325  Q
    |||||| ||| ||||| |||||| | ||||||||||||||||||| ||||||||    
T  44685426 aaaagagaatgaaattcaatgatattaattgatgtgattaaattagttttgttt 44685373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 325
Target Start/End: Original strand, 31446663 - 31446714
Alignment:
Q  274 aagataataaaattaaatgatgtcaattgatgtgattaaattatttttgttt 325  Q
    |||| ||||||||||||||||||  |||||| ||| ||||||||||||||||    
T  31446663 aagagaataaaattaaatgatgttgattgatatgaataaattatttttgttt 31446714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 38735908 - 38735948
Alignment:
Q  282 aaaattaaatgatgtcaattgatgtgattaaattatttttg 322  Q
    |||||||||||||||  |||||||||||| |||||||||||    
T  38735908 aaaattaaatgatgttgattgatgtgatttaattatttttg 38735948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 330
Target Start/End: Complemental strand, 28979126 - 28979068
Alignment:
Q  272 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtttaattt 330  Q
    |||||||||||||||| ||| | |||||||||| |||||||||  ||||| ||||||||    
T  28979126 aaaagataataaaattgaataaagtcaattgatatgattaaatattttttctttaattt 28979068  T

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Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 38734677 - 38734730
Alignment:
Q  272 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgttt 325  Q
    |||||| ||||||| ||||||||||  |||||||||||  ||||||||||||||    
T  38734677 aaaagagaataaaactaaatgatgttgattgatgtgatctaattatttttgttt 38734730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 33388776 - 33388724
Alignment:
Q  272 aaaagataataaaattaaatgatgtcaattgatgtgattaaattatttttgtt 324  Q
    |||||||||| ||||| |||||| | ||||||||||| ||||||| |||||||    
T  33388776 aaaagataattaaattcaatgatattaattgatgtgactaaattagttttgtt 33388724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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