View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2498_low_56 (Length: 248)
Name: NF2498_low_56
Description: NF2498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2498_low_56 |
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Alignment Details
Target: chr6 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 29006038 - 29006267
Alignment:
| Q |
1 |
aaatacccatactatacatctcatatcaaactaagaatgagaagttgtcacataaagcaaacaaatgtaactctgattcctagtggccccgacataaaaa |
100 |
Q |
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| T |
29006038 |
aaatacccatactatacatctcatatcaaactaagaatgagaagttgtcacataaagcaaacaaatgtaactctgattcctagtggccccgacataaaaa |
29006137 |
T |
|
| Q |
101 |
ataaataatgaatccaaagacaagggtcagggggtcaagaagcaagttggagctttaattgacaccagttgtctacatacctgttgtttatggtgataat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29006138 |
ataaataatgaatccaaagacaagggtcagggggtcaagaagcaagttggagctttaattgacaccagttgtctacatacctgttgtttatggtgataat |
29006237 |
T |
|
| Q |
201 |
aatgtctaaatattcattaagaagaatgtg |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
29006238 |
aatgtctaaatattcattaagaagaatgtg |
29006267 |
T |
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