View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2498_low_7 (Length: 577)

Name: NF2498_low_7
Description: NF2498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2498_low_7
NF2498_low_7
[»] chr3 (56 HSPs)
chr3 (363-562)||(30189250-30189449)
chr3 (91-242)||(30189569-30189719)
chr3 (91-242)||(37042393-37042542)
chr3 (117-237)||(579140-579258)
chr3 (91-241)||(14752184-14752332)
chr3 (117-242)||(23311595-23311718)
chr3 (91-241)||(28875406-28875554)
chr3 (92-242)||(11054288-11054433)
chr3 (117-241)||(50651039-50651161)
chr3 (93-241)||(6438083-6438229)
chr3 (92-241)||(6075081-6075228)
chr3 (91-241)||(37074958-37075108)
chr3 (91-241)||(46711634-46711781)
chr3 (91-241)||(35963152-35963300)
chr3 (120-241)||(47864191-47864310)
chr3 (120-241)||(36546542-36546661)
chr3 (120-241)||(36561654-36561773)
chr3 (91-182)||(23910489-23910580)
chr3 (120-241)||(7866488-7866607)
chr3 (95-241)||(32619810-32619954)
chr3 (138-241)||(54464918-54465019)
chr3 (117-180)||(9264610-9264673)
chr3 (91-241)||(53270233-53270383)
chr3 (120-181)||(2927347-2927408)
chr3 (125-241)||(8703109-8703221)
chr3 (125-241)||(9054996-9055108)
chr3 (117-241)||(19464075-19464197)
chr3 (117-240)||(20847270-20847391)
chr3 (120-182)||(29235244-29235306)
chr3 (120-178)||(31836980-31837038)
chr3 (133-181)||(34722623-34722671)
chr3 (91-172)||(41476312-41476393)
chr3 (133-180)||(34194941-34194988)
chr3 (133-180)||(46918231-46918278)
chr3 (121-241)||(50730109-50730226)
chr3 (121-241)||(50782628-50782745)
chr3 (117-179)||(3972335-3972396)
chr3 (117-179)||(3997482-3997543)
chr3 (117-182)||(26724993-26725058)
chr3 (133-180)||(16033005-16033052)
chr3 (123-169)||(10014333-10014379)
chr3 (123-169)||(10114975-10115021)
chr3 (123-169)||(10252075-10252121)
chr3 (191-241)||(48802554-48802604)
chr3 (133-175)||(54725628-54725670)
chr3 (124-169)||(22456017-22456062)
chr3 (117-169)||(22479056-22479108)
chr3 (91-241)||(26208014-26208162)
chr3 (133-180)||(8097036-8097083)
chr3 (191-241)||(33974633-33974683)
chr3 (151-230)||(47866949-47867026)
chr3 (145-182)||(6752727-6752764)
chr3 (136-180)||(7886638-7886682)
chr3 (133-169)||(21214305-21214341)
chr3 (117-169)||(38401444-38401496)
chr3 (201-241)||(41476413-41476453)
[»] chr7 (31 HSPs)
chr7 (91-242)||(46760273-46760422)
chr7 (117-242)||(25737669-25737792)
chr7 (91-242)||(45485950-45486099)
chr7 (117-242)||(35923247-35923370)
chr7 (91-242)||(14805865-14806013)
chr7 (91-242)||(15252859-15253007)
chr7 (92-241)||(25944572-25944719)
chr7 (91-242)||(19912785-19912934)
chr7 (91-241)||(18102526-18102674)
chr7 (91-241)||(20123696-20123844)
chr7 (91-241)||(6191041-6191189)
chr7 (117-241)||(4910675-4910797)
chr7 (91-176)||(12632360-12632445)
chr7 (117-241)||(22632085-22632207)
chr7 (117-180)||(35068891-35068954)
chr7 (117-241)||(47779600-47779722)
chr7 (92-241)||(44682874-44683020)
chr7 (130-181)||(9158143-9158194)
chr7 (137-241)||(47557663-47557765)
chr7 (120-181)||(16917525-16917586)
chr7 (130-182)||(4069056-4069108)
chr7 (119-182)||(31549947-31550010)
chr7 (200-241)||(12633110-12633151)
chr7 (123-168)||(31769010-31769055)
chr7 (194-241)||(11780014-11780061)
chr7 (133-180)||(24151640-24151687)
chr7 (124-182)||(2610617-2610675)
chr7 (117-167)||(35888011-35888061)
chr7 (133-182)||(48413771-48413820)
chr7 (133-169)||(10248594-10248630)
chr7 (92-181)||(14574618-14574707)
[»] chr4 (46 HSPs)
chr4 (91-242)||(47867872-47868021)
chr4 (91-241)||(20281585-20281733)
chr4 (91-242)||(2229240-2229389)
chr4 (91-241)||(4058709-4058857)
chr4 (117-241)||(14332754-14332876)
chr4 (91-241)||(26916319-26916467)
chr4 (91-241)||(29203500-29203648)
chr4 (91-241)||(55580663-55580812)
chr4 (91-219)||(7654633-7654759)
chr4 (120-241)||(20716174-20716293)
chr4 (117-241)||(56318106-56318228)
chr4 (91-241)||(39078151-39078298)
chr4 (91-241)||(41414621-41414768)
chr4 (120-241)||(10069691-10069810)
chr4 (119-241)||(17794579-17794699)
chr4 (93-232)||(24940368-24940505)
chr4 (117-241)||(28669037-28669158)
chr4 (91-182)||(16604856-16604947)
chr4 (117-241)||(5483314-5483436)
chr4 (117-241)||(42915523-42915646)
chr4 (117-181)||(48793664-48793728)
chr4 (117-241)||(35310778-35310900)
chr4 (117-241)||(1585383-1585505)
chr4 (117-180)||(46070558-46070621)
chr4 (119-241)||(52535626-52535743)
chr4 (121-175)||(50145794-50145848)
chr4 (118-175)||(21722719-21722776)
chr4 (121-169)||(32203277-32203325)
chr4 (145-241)||(35529666-35529760)
chr4 (117-180)||(47516227-47516290)
chr4 (136-182)||(17186850-17186896)
chr4 (123-169)||(49080321-49080367)
chr4 (117-182)||(8683342-8683407)
chr4 (136-180)||(5841834-5841878)
chr4 (92-149)||(16473832-16473889)
chr4 (134-182)||(17799187-17799235)
chr4 (117-180)||(8178275-8178338)
chr4 (133-168)||(29511490-29511525)
chr4 (117-168)||(32410393-32410444)
chr4 (117-167)||(5064691-5064741)
chr4 (135-169)||(23978169-23978203)
chr4 (120-182)||(25297261-25297323)
chr4 (117-182)||(5815520-5815585)
chr4 (117-181)||(19351899-19351964)
chr4 (133-169)||(28142674-28142710)
chr4 (137-169)||(28318473-28318505)
[»] chr6 (13 HSPs)
chr6 (91-242)||(11082262-11082411)
chr6 (91-242)||(35129071-35129221)
chr6 (91-242)||(21542413-21542562)
chr6 (91-242)||(3095737-3095885)
chr6 (91-242)||(34177658-34177807)
chr6 (120-241)||(7274921-7275040)
chr6 (118-182)||(30794236-30794300)
chr6 (120-182)||(12461474-12461537)
chr6 (117-169)||(16524443-16524495)
chr6 (133-175)||(5300659-5300701)
chr6 (123-169)||(16013481-16013527)
chr6 (117-169)||(4032051-4032103)
chr6 (117-169)||(4988007-4988059)
[»] chr8 (38 HSPs)
chr8 (91-241)||(34890192-34890340)
chr8 (91-242)||(7022421-7022570)
chr8 (93-241)||(31734109-31734255)
chr8 (91-242)||(26483525-26483674)
chr8 (91-241)||(28348605-28348752)
chr8 (91-241)||(36190766-36190914)
chr8 (91-241)||(43216365-43216513)
chr8 (91-241)||(24892832-24892983)
chr8 (91-241)||(7858522-7858670)
chr8 (125-231)||(8711881-8711985)
chr8 (120-241)||(8107665-8107783)
chr8 (117-241)||(15957955-15958079)
chr8 (117-241)||(13143758-13143880)
chr8 (117-241)||(41086430-41086552)
chr8 (117-182)||(35525638-35525703)
chr8 (144-241)||(7499720-7499816)
chr8 (130-241)||(34158348-34158457)
chr8 (91-182)||(13143963-13144055)
chr8 (129-241)||(35456080-35456190)
chr8 (117-182)||(29920312-29920377)
chr8 (133-180)||(17713276-17713323)
chr8 (130-176)||(2052891-2052937)
chr8 (122-180)||(26954441-26954499)
chr8 (117-182)||(30575878-30575944)
chr8 (142-232)||(3642039-3642126)
chr8 (117-169)||(41362351-41362403)
chr8 (118-181)||(16358157-16358219)
chr8 (199-241)||(8709908-8709950)
chr8 (133-169)||(8745647-8745683)
chr8 (133-180)||(2628224-2628271)
chr8 (117-241)||(4046938-4047060)
chr8 (199-241)||(2052830-2052872)
chr8 (126-180)||(8712577-8712631)
chr8 (199-241)||(13144085-13144127)
chr8 (123-169)||(17336806-17336852)
chr8 (117-175)||(44663833-44663891)
chr8 (136-169)||(25195109-25195142)
chr8 (133-169)||(8673445-8673481)
[»] chr5 (38 HSPs)
chr5 (91-242)||(6686379-6686529)
chr5 (91-242)||(43589979-43590128)
chr5 (95-241)||(11261905-11262049)
chr5 (91-241)||(20644010-20644158)
chr5 (91-231)||(37522606-37522744)
chr5 (91-241)||(42273645-42273791)
chr5 (93-241)||(32110998-32111144)
chr5 (91-241)||(37562778-37562927)
chr5 (91-241)||(34425327-34425474)
chr5 (117-241)||(38130159-38130281)
chr5 (91-239)||(20039100-20039246)
chr5 (121-241)||(38280843-38280961)
chr5 (129-241)||(32017700-32017809)
chr5 (117-241)||(39505276-39505397)
chr5 (120-241)||(8225459-8225577)
chr5 (117-240)||(19413138-19413259)
chr5 (117-241)||(5984151-5984280)
chr5 (117-230)||(4463367-4463478)
chr5 (117-241)||(25840860-25840982)
chr5 (117-178)||(12912337-12912398)
chr5 (143-241)||(9957488-9957581)
chr5 (120-181)||(104260-104321)
chr5 (117-174)||(42104291-42104348)
chr5 (117-169)||(3463858-3463910)
chr5 (133-177)||(10153987-10154031)
chr5 (120-241)||(17351384-17351503)
chr5 (133-180)||(5369090-5369137)
chr5 (117-168)||(8959707-8959758)
chr5 (199-241)||(12730103-12730145)
chr5 (117-179)||(43454366-43454428)
chr5 (117-181)||(41625554-41625618)
chr5 (206-241)||(12792931-12792966)
chr5 (136-182)||(12729937-12729982)
chr5 (136-182)||(12792839-12792884)
chr5 (199-240)||(104345-104386)
chr5 (133-169)||(8506497-8506533)
chr5 (117-169)||(16153389-16153440)
chr5 (133-169)||(29307246-29307282)
[»] chr1 (62 HSPs)
chr1 (91-239)||(2126036-2126182)
chr1 (91-242)||(35691387-35691537)
chr1 (91-241)||(15959657-15959805)
chr1 (91-241)||(39555603-39555751)
chr1 (91-242)||(24190465-24190613)
chr1 (91-241)||(32624022-32624170)
chr1 (92-241)||(12448985-12449132)
chr1 (117-241)||(6785452-6785574)
chr1 (117-241)||(42965859-42965979)
chr1 (95-241)||(6786834-6786978)
chr1 (91-182)||(11241080-11241171)
chr1 (91-241)||(33369549-33369694)
chr1 (120-241)||(45226134-45226253)
chr1 (117-241)||(40718674-40718796)
chr1 (117-241)||(7468006-7468128)
chr1 (117-241)||(43667346-43667466)
chr1 (117-241)||(32983215-32983335)
chr1 (130-241)||(47600095-47600204)
chr1 (91-180)||(28016763-28016852)
chr1 (91-241)||(39932589-39932737)
chr1 (117-241)||(47014534-47014655)
chr1 (120-182)||(46818548-46818610)
chr1 (119-241)||(23392211-23392330)
chr1 (136-241)||(28120817-28120920)
chr1 (117-241)||(2246057-2246179)
chr1 (133-180)||(5858430-5858477)
chr1 (117-241)||(24728670-24728792)
chr1 (117-241)||(3875060-3875186)
chr1 (134-241)||(6787050-6787154)
chr1 (117-182)||(10558799-10558864)
chr1 (117-182)||(44148879-44148944)
chr1 (125-241)||(1820411-1820524)
chr1 (125-238)||(16854139-16854250)
chr1 (117-241)||(3076291-3076413)
chr1 (91-175)||(52984993-52985077)
chr1 (117-179)||(1034913-1034975)
chr1 (91-241)||(46542980-46543126)
chr1 (91-232)||(13136571-13136707)
chr1 (117-181)||(43765348-43765412)
chr1 (125-181)||(50370015-50370071)
chr1 (118-181)||(3861739-3861802)
chr1 (117-180)||(33431614-33431677)
chr1 (133-182)||(32318619-32318668)
chr1 (120-230)||(37735429-37735537)
chr1 (133-180)||(5950494-5950541)
chr1 (130-169)||(13351746-13351785)
chr1 (133-180)||(16688191-16688238)
chr1 (117-180)||(51840538-51840601)
chr1 (133-175)||(8889756-8889798)
chr1 (117-182)||(30221778-30221843)
chr1 (117-169)||(7397772-7397824)
chr1 (133-168)||(15912265-15912300)
chr1 (133-241)||(25391680-25391784)
chr1 (91-167)||(32742219-32742295)
chr1 (133-180)||(37538864-37538911)
chr1 (199-241)||(28016867-28016909)
chr1 (117-169)||(25185347-25185399)
chr1 (117-169)||(30701428-30701480)
chr1 (136-180)||(35366265-35366309)
chr1 (117-181)||(47302949-47303012)
chr1 (201-241)||(50012587-50012627)
chr1 (117-169)||(50176588-50176640)
[»] scaffold0300 (1 HSPs)
scaffold0300 (91-242)||(590-739)
[»] chr2 (38 HSPs)
chr2 (91-242)||(35517118-35517267)
chr2 (91-241)||(28599164-28599312)
chr2 (117-241)||(3201322-3201444)
chr2 (91-241)||(6110215-6110365)
chr2 (91-241)||(19264095-19264244)
chr2 (91-241)||(45085253-45085401)
chr2 (117-241)||(45660361-45660483)
chr2 (136-241)||(41528252-41528355)
chr2 (117-241)||(28858305-28858427)
chr2 (91-180)||(11617079-11617168)
chr2 (117-241)||(33198673-33198795)
chr2 (117-182)||(14874016-14874081)
chr2 (117-230)||(40584440-40584551)
chr2 (93-181)||(24204547-24204635)
chr2 (117-241)||(25572042-25572163)
chr2 (117-241)||(29524083-29524205)
chr2 (118-182)||(8701655-8701719)
chr2 (118-241)||(6765976-6766098)
chr2 (91-182)||(12938295-12938386)
chr2 (133-182)||(33677536-33677585)
chr2 (117-169)||(32273737-32273789)
chr2 (117-168)||(43415468-43415519)
chr2 (117-182)||(9864761-9864826)
chr2 (117-228)||(5963210-5963318)
chr2 (117-179)||(40808762-40808823)
chr2 (123-168)||(16494974-16495019)
chr2 (91-173)||(35022961-35023042)
chr2 (133-182)||(35115862-35115911)
chr2 (117-169)||(4891681-4891733)
chr2 (133-169)||(26998383-26998419)
chr2 (117-169)||(32010168-32010220)
chr2 (117-169)||(38071061-38071113)
chr2 (91-174)||(7645243-7645326)
chr2 (199-241)||(7645352-7645394)
chr2 (133-175)||(11030988-11031030)
chr2 (191-241)||(30421296-30421346)
chr2 (133-169)||(8032726-8032762)
chr2 (194-230)||(39696916-39696952)
[»] scaffold0774 (1 HSPs)
scaffold0774 (93-241)||(3447-3593)
[»] scaffold0062 (1 HSPs)
scaffold0062 (91-241)||(44788-44936)
[»] scaffold0442 (1 HSPs)
scaffold0442 (117-241)||(10041-10163)
[»] scaffold0045 (1 HSPs)
scaffold0045 (91-241)||(77953-78101)
[»] scaffold0018 (1 HSPs)
scaffold0018 (120-241)||(154857-154976)
[»] scaffold1786 (1 HSPs)
scaffold1786 (119-182)||(900-963)
[»] scaffold0009 (1 HSPs)
scaffold0009 (117-241)||(157790-157912)
[»] scaffold0111 (1 HSPs)
scaffold0111 (117-180)||(40234-40297)
[»] scaffold0132 (2 HSPs)
scaffold0132 (117-241)||(1008-1130)
scaffold0132 (117-241)||(8968-9090)
[»] scaffold0012 (1 HSPs)
scaffold0012 (117-230)||(160257-160368)
[»] scaffold0330 (1 HSPs)
scaffold0330 (117-169)||(3234-3286)


Alignment Details
Target: chr3 (Bit Score: 196; Significance: 1e-106; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 363 - 562
Target Start/End: Complemental strand, 30189449 - 30189250
Alignment:
Q  363 gggtacaatgttatcctcttagcattttacaataaatgaatttgttttttccatttaaaatacattactcacatttctcacttttctcgtttccattgat 462  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30189449 gggtacaatgttatcctcttagcattttacaataaatgaatttgttttttccatttaaaatacattactcacatttctcacttttctcgtttccattgat 30189350  T
Q  463 actatttaacatgtttccctcatgttatcaaccaccaacttaattttaaagagaatagtgttatcaacattctcttatttacactctatttaacacccat 562  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30189349 actatttaacatgtttccctcatgttatcaaccaccaacttaattttaaagagaatagtgttatgaacattctcttatttacactctatttaacacccat 30189250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 30189719 - 30189569
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||            
T  30189719 cataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg-aaaaaaa 30189621  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30189620 tgaaagaaagagaatattgaatgtaatttacatttaattttacgagaataac 30189569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 91 - 242
Target Start/End: Original strand, 37042393 - 37042542
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    ||||| |||||||||||||       |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||            
T  37042393 cataaaaatttggagtatagttttttgtgttttcgttggaaaaagttttataggaagatgtaaaaacaattttcattggctattgattatgg--aaaaaa 37042490  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  37042491 tgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac 37042542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 579140 - 579258
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||| |||||| |||||||||||    
T  579140 gtgttttctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg--aaaaaatgaaagagagagaaaattgaatgtaa 579237  T
Q  217 tttgcatttaattttacgaga 237  Q
    |||||||||||||||| ||||    
T  579238 tttgcatttaattttatgaga 579258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 91 - 241
Target Start/End: Original strand, 14752184 - 14752332
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       ||||||||||||||||||  ||||||||||||| |||||||||||||||||| |||||||||||||            
T  14752184 cataagaatttggagtataattttttgtgttttctttggaaaaaaatttataggaagatgtaaaaacaattttcattgactattggttatgg--aaaaaa 14752281  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  14752282 tgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 14752332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 117 - 242
Target Start/End: Original strand, 23311595 - 23311718
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||    
T  23311595 gtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg--aaaaaatgaaagaaagagaaaattgaatgtaa 23311692  T
Q  217 tttgcatttaattttacgagaataac 242  Q
    | | |||||||||||| |||||||||    
T  23311693 tatacatttaattttatgagaataac 23311718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 28875554 - 28875406
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||| ||||       |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||            
T  28875554 cataagaatttggactatagttatttgtgttttctttggaaaaagttttataagaagatgtaaaaacaattttcattggctattggttatgg--agaaaa 28875457  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||||| |||| ||||||||||||||| ||||||||||| ||||||||    
T  28875456 tgaaagaaaaagaaaattgaatgtaatttgtatttaattttatgagaataa 28875406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 92 - 242
Target Start/End: Original strand, 11054288 - 11054433
Alignment:
Q  92 ataagaatttggagtatannnnnnngtgttttctttggaaaa-agttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    ||||||||||||||||||       ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||            
T  11054288 ataagaatttggagtatagttttttgtgttttctttggaaaaaagttttataggaagatttaaaaacaattttcattggctattggttatggaaaa---- 11054383  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
      || ||||||||| ||||||||||||||||||||||||||| |||||||||    
T  11054384 --aatgaaagagaaaattgaatgtaatttgcatttaattttatgagaataac 11054433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 50651039 - 50651161
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||        | ||||| |||||| |||||||||||    
T  50651039 gtgttttctttgcaaaaagttttataggaagatgtaaaaacaattttcattgactattggttatgg--agaaaataaaagagagagaaaattgaatgtaa 50651136  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||||| ||||||||    
T  50651137 tttgcatttaattttatgagaataa 50651161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 6438229 - 6438083
Alignment:
Q  93 taagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntg 192  Q
    |||||||||||||||||       |||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||        ||    
T  6438229 taagaatttggagtatagttttttgtgttttctttgaaaaaagctttataggaagatgtaaaaacaattttcattggctattggttatgg--agaaaatg 6438132  T
Q  193 aaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||| ||| || ||| ||||||||||||||||||||||| ||||||||    
T  6438131 aaagagagataaaattaaatgtaatttgcatttaattttatgagaataa 6438083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 92 - 241
Target Start/End: Complemental strand, 6075228 - 6075081
Alignment:
Q  92 ataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnnt 191  Q
    ||||||||||||||||||       |||||||||||||||||||| ||| |||||||  |||||||||||||||||||| ||||||||||         |    
T  6075228 ataagaatttggagtataattttttgtgttttctttggaaaaagtgttacaggaagaagtaaaaacaattttcattggccattggttatg--caaaaaat 6075131  T
Q  192 gaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    |||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  6075130 gaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 6075081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 37075108 - 37074958
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||| ||||||       ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |            
T  37075108 cataagaatttgaagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaacacaattttcattggctattggttatagaaaaaatg 37075009  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
      |||||  || || ||||||||||||||||||||||||||| ||||||||    
T  37075008 aaaaagagcgataaaattgaatgtaatttgcatttaattttatgagaataa 37074958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 91 - 241
Target Start/End: Original strand, 46711634 - 46711781
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       |||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||             
T  46711634 cataagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatattcattggctattggttatg---aaaaaa 46711730  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| ||||||  |||||||||||||| ||||||||||| || |||||    
T  46711731 tgaaagagagagaaatttgaatgtaatttgtatttaattttatgaaaataa 46711781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 35963300 - 35963152
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       ||||||| |||||||||||||||||||||||||  |||||||||||| ||||| ||||||||||||            
T  35963300 cataagaatttggagtatagttttttgtgttttgtttggaaaaagttttataggaagatggaaaaacaatttttattggttattggttatgg--agaaaa 35963203  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| |||||| ||| |||| |||||||||||||||||| ||||||||    
T  35963202 tgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 35963152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 120 - 241
Target Start/End: Complemental strand, 47864310 - 47864191
Alignment:
Q  120 ttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaattt 219  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||| |||||| |||||         ||||||| ||| || ||||||||||||||    
T  47864310 ttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattgactattgattatg--aaaaaaatgaaagagagaaaaaattgaatgtaattt 47864213  T
Q  220 gcatttaattttacgagaataa 241  Q
    ||||||||||||| ||||||||    
T  47864212 gcatttaattttatgagaataa 47864191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 120 - 241
Target Start/End: Complemental strand, 36546661 - 36546542
Alignment:
Q  120 ttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaattt 219  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| |        ||||||| |||||  ||| ||||||||||    
T  36546661 ttttctttggaaaaagtttcataggaagatgtaaaaccaattttcattggctattggttatag--aaaaaatgaaagagagagagaatttaatgtaattt 36546564  T
Q  220 gcatttaattttacgagaataa 241  Q
    ||||||||||||| ||||||||    
T  36546563 gcatttaattttatgagaataa 36546542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 120 - 241
Target Start/End: Original strand, 36561654 - 36561773
Alignment:
Q  120 ttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaattt 219  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| |        ||||||| |||||  ||| ||||||||||    
T  36561654 ttttctttggaaaaagtttcataggaagatgtaaaaccaattttcattggctattggttatag--aaaaaatgaaagagagagagaatttaatgtaattt 36561751  T
Q  220 gcatttaattttacgagaataa 241  Q
    ||||||||||||| ||||||||    
T  36561752 gcatttaattttatgagaataa 36561773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 91 - 182
Target Start/End: Original strand, 23910489 - 23910580
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    ||||||||||| |||||||       |||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  23910489 cataagaatttagagtatagctttttgtgttttctttgtaaaaagttttataggaagatgtaaaaataattttcattggctattggttatgg 23910580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 120 - 241
Target Start/End: Original strand, 7866488 - 7866607
Alignment:
Q  120 ttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaattt 219  Q
    ||||||||| ||||||||||||| |||||| |||||||||||||||||| |||||||||||||        | ||||| | |||| ||||||||||||||    
T  7866488 ttttctttgaaaaaagttttataagaagatgtaaaaacaattttcattgactattggttatgg--aaaaaataaaagagatagaaaattgaatgtaattt 7866585  T
Q  220 gcatttaattttacgagaataa 241  Q
     |||||||||||| ||||||||    
T  7866586 tcatttaattttatgagaataa 7866607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 95 - 241
Target Start/End: Original strand, 32619810 - 32619954
Alignment:
Q  95 agaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaa 194  Q
    |||||||||||||||       ||||||||||||||| | |||||||| |||||| |||||| |||||||||||||||||||||||||         ||     
T  32619810 agaatttggagtataatattttgtgttttctttggaataggttttataagaagatgtaaaaataattttcattggctattggttatggagaaattgggat 32619909  T
Q  195 agaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||  |||||| |||||||||||||||||||||||||||  |||||||    
T  32619910 ag--agagaaaattgaatgtaatttgcatttaattttattagaataa 32619954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 138 - 241
Target Start/End: Original strand, 54464918 - 54465019
Alignment:
Q  138 ttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttgcatttaattttacgaga 237  Q
    |||||||||||| |||||||||||||| |||||||||||||||||        ||||||| |||||| |||||||||||||||| |||||||||| ||||    
T  54464918 ttataggaagatgtaaaaacaattttcgttggctattggttatgg--aaaaagtgaaagagagagaaaattgaatgtaatttgcgtttaattttatgaga 54465015  T
Q  238 ataa 241  Q
    ||||    
T  54465016 ataa 54465019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 9264673 - 9264610
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    |||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||| |||||    
T  9264673 gtgttttctttgaaaaaagttttatatgaagatgtaaaaacaattttcattggctattcgttat 9264610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 53270383 - 53270233
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       |||||||||||| ||||||||| |||| |||||  ||||| ||||||||||| |||||||||||||            
T  53270383 cataagaatttggagtatagttttttgtgttttctttgaaaaaagtttcatagaaagatgaaaaaataattttcattgcctattggttatgg--aaaaaa 53270286  T
Q  191 tgaaagaaag--agaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| ||  |||| ||||||||||||||| ||||||||||| ||||||||    
T  53270285 tgaaagagagaaagaaaattgaatgtaatttgtatttaattttatgagaataa 53270233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 2927408 - 2927347
Alignment:
Q  120 ttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatg 181  Q
    |||||||||||| ||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  2927408 ttttctttggaataagttttatgggaagatgtaaaaataattttcattggctattggttatg 2927347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 125 - 241
Target Start/End: Complemental strand, 8703221 - 8703109
Alignment:
Q  125 tttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttgcatt 224  Q
    ||||||||||  ||||||||||||| ||||||||| ||||||||||||||| ||||||        ||||||| | |||| ||| |||||||||||||||    
T  8703221 tttggaaaaaaatttataggaagatgtaaaaacaa-tttcattggctattgattatgg---aaaaatgaaagagaaagaaaatttaatgtaatttgcatt 8703126  T
Q  225 taattttacgagaataa 241  Q
    |||||||| ||||||||    
T  8703125 taattttatgagaataa 8703109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 125 - 241
Target Start/End: Complemental strand, 9055108 - 9054996
Alignment:
Q  125 tttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttgcatt 224  Q
    ||||||||||  ||||||||||||| ||||||||| ||||||||||||||| ||||||        ||||||| | |||| ||| |||||||||||||||    
T  9055108 tttggaaaaaaatttataggaagatgtaaaaacaa-tttcattggctattgattatgg---aaaaatgaaagagaaagaaaatttaatgtaatttgcatt 9055013  T
Q  225 taattttacgagaataa 241  Q
    |||||||| ||||||||    
T  9055012 taattttatgagaataa 9054996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 19464197 - 19464075
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||||||||   ||||||||||||        ||||||| ||| ||  ||||||||||    
T  19464197 gtgttttctttgaaaaaagttttataggaagattgaaaaacaattttcatttattattggttatgg--gaaaaatgaaagagagaaaaagttgaatgtaa 19464100  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    ||||||||| | |||| ||||||||    
T  19464099 tttgcatttcagtttatgagaataa 19464075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 20847270 - 20847391
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||||||| |||||| |||||||||| |  ||||||||||||||||  |||| ||||||        ||||||| ||  || |||||||||||    
T  20847270 gtgttttctttggaataagtttcataggaagatgtgcaaacaattttcattggtaattgattatgg--agaaaatgaaagagaggaaaaattgaatgtaa 20847367  T
Q  217 tttgcatttaattttacgagaata 240  Q
    |||||||||||||||| |||||||    
T  20847368 tttgcatttaattttatgagaata 20847391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 29235306 - 29235244
Alignment:
Q  120 ttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    |||||||| ||||| |||| |||||||||| |||||| |||||||||||||||||||||||||    
T  29235306 ttttctttagaaaacgtttaataggaagatgtaaaaataattttcattggctattggttatgg 29235244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 31837038 - 31836980
Alignment:
Q  120 ttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggtt 178  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||    
T  31837038 ttttctttggaaaaagttttataggaatatgcaaaaacaattttcattgactattggtt 31836980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 34722623 - 34722671
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattggttatg 181  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  34722623 aagttttataagaagatgtaaaaacaattttcattggctattggttatg 34722671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 91 - 172
Target Start/End: Original strand, 41476312 - 41476393
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggcta 172  Q
    ||||| |||||||||||||       |||||||||||| |||||||||||||| ||||| |||||| |||||||||||||||    
T  41476312 cataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaataattttcattggcta 41476393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 34194988 - 34194941
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  34194988 aagttttataggaagatgtaaaaacaattttcattggttattggttat 34194941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 46918231 - 46918278
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  46918231 aagttttataggaagatctaaaaacaattttcattggttattggttat 46918278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 241
Target Start/End: Complemental strand, 50730226 - 50730109
Alignment:
Q  121 tttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttg 220  Q
    ||||||||||||||||||||||||||||| |||||| ||   |||||| |||||||||||||        | ||| | |||||| ||||||||||||||     
T  50730226 tttctttggaaaaagttttataggaagatgtaaaaa-aaaaatcattgactattggttatgg--aaaaaataaaaaagagagaaaattgaatgtaattta 50730130  T
Q  221 catttaattttacgagaataa 241  Q
    |||||||||||| ||||||||    
T  50730129 catttaattttaagagaataa 50730109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 241
Target Start/End: Original strand, 50782628 - 50782745
Alignment:
Q  121 tttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttg 220  Q
    ||||||||||||||||||||||||||||| |||||| ||   |||||| |||||||||||||        | ||| | |||||| ||||||||||||||     
T  50782628 tttctttggaaaaagttttataggaagatgtaaaaa-aaaaatcattgactattggttatgg--aaaaaataaaaaagagagaaaattgaatgtaattta 50782724  T
Q  221 catttaattttacgagaataa 241  Q
    |||||||||||| ||||||||    
T  50782725 catttaattttaagagaataa 50782745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 117 - 179
Target Start/End: Complemental strand, 3972396 - 3972335
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggtta 179  Q
    |||||||||||| || ||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  3972396 gtgttttctttg-aataagttttatgggaagatgtaaaaacaattttcattagctattggtta 3972335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 3997482 - 3997543
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggtta 179  Q
    |||||||||||| || ||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  3997482 gtgttttctttg-aataagttttatgggaagatgtaaaaacaattttcattagctattggtta 3997543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 26724993 - 26725058
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    ||||||||||||||| ||||||| |  |||||| ||||||||||||||||||| ||||| ||||||    
T  26724993 gtgttttctttggaataagttttctgagaagatgtaaaaacaattttcattggttattgattatgg 26725058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 16033005 - 16033052
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    ||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  16033005 aagttttataggaagatgtaaaaacaattttcattggttattagttat 16033052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 169
Target Start/End: Complemental strand, 10014379 - 10014333
Alignment:
Q  123 tctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    |||||| || ||||||||||||||||| |||||||||||||||||||    
T  10014379 tctttgaaataagttttataggaagatgtaaaaacaattttcattgg 10014333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 169
Target Start/End: Complemental strand, 10115021 - 10114975
Alignment:
Q  123 tctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    |||||| || ||||||||||||||||| |||||||||||||||||||    
T  10115021 tctttgaaataagttttataggaagatgtaaaaacaattttcattgg 10114975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 169
Target Start/End: Complemental strand, 10252121 - 10252075
Alignment:
Q  123 tctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    |||||| || ||||||||||||||||| |||||||||||||||||||    
T  10252121 tctttgaaataagttttataggaagatgtaaaaacaattttcattgg 10252075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 48802554 - 48802604
Alignment:
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| |||||| ||||||||||||||||||||| ||||| ||||||||    
T  48802554 tgaaagagagagaaaattgaatgtaatttgcatttacttttatgagaataa 48802604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 54725628 - 54725670
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattg 175  Q
    ||||||||||||||||| ||||||||||||||||||| |||||    
T  54725628 aagttttataggaagatgtaaaaacaattttcattggttattg 54725670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 22456017 - 22456062
Alignment:
Q  124 ctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||| || ||||||||||||||||||||||||||||||| |||||    
T  22456017 ctttgaaataagttttataggaagatataaaaacaattttgattgg 22456062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 22479056 - 22479108
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||| |||||| || ||||||||||||||||| |||||||| ||||||||||    
T  22479056 gtgttatctttgaaataagttttataggaagatgtaaaaacacttttcattgg 22479108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 26208162 - 26208014
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    ||||||||||| |||||||       ||||||| | ||||| |||||| || | ||||| ||||||||||||||||||||||||  || |||            
T  26208162 cataagaatttagagtatagttttttgtgttttgtctggaataagtttcatggtaagatgtaaaaacaattttcattggctatttattgtgg--agaaaa 26208065  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    || ||||||||||| ||||||||||||| |||||| | |||| ||||||||    
T  26208064 tggaagaaagagaaaattgaatgtaattggcatttgaatttatgagaataa 26208014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 8097036 - 8097083
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    ||||||||||||||||| |||||| |||||||||||| ||||| ||||    
T  8097036 aagttttataggaagatgtaaaaataattttcattggttattgcttat 8097083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 33974633 - 33974683
Alignment:
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| | |||| ||| ||||||||||||||||||||||| ||||||||    
T  33974633 tgaaagagaaagaaaatttaatgtaatttgcatttaattttatgagaataa 33974683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 47866949 - 47867026
Alignment:
Q  151 taaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttgcatttaattt 230  Q
    ||||||| ||||||||||||||||| ||||||        || |||| |||||| |||||||||||||||||||||||||    
T  47866949 taaaaaccattttcattggctattgattatggagaaag--tggaagagagagaaaattgaatgtaatttgcatttaattt 47867026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 6752764 - 6752727
Alignment:
Q  145 aagatataaaaacaattttcattggctattggttatgg 182  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  6752764 aagatgtaaaaacaattttaattggctattggttatgg 6752727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 7886638 - 7886682
Alignment:
Q  136 ttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    |||||||| ||||| ||||||||||||||||||| |||| |||||    
T  7886638 ttttatagaaagatgtaaaaacaattttcattggttattagttat 7886682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 21214341 - 21214305
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  21214341 aagttttatagaaagatgtaaaaacaattttcattgg 21214305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 38401496 - 38401444
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||| |||||| || |||||||||||| |||| |||||| ||||||||||||    
T  38401496 gtgttatctttgaaataagttttatagggagatgtaaaaataattttcattgg 38401444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 41476413 - 41476453
Alignment:
Q  201 agaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    |||| ||||||| ||||||||||||||||||| ||||||||    
T  41476413 agaaaattgaatctaatttgcatttaattttatgagaataa 41476453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 3e-43; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 91 - 242
Target Start/End: Original strand, 46760273 - 46760422
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||            
T  46760273 cataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg--aaaaaa 46760370  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  46760371 tgaaagaaagagaatattgaatgtaatttgcatttaattttatgagaataac 46760422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 117 - 242
Target Start/End: Original strand, 25737669 - 25737792
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||    
T  25737669 gtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg--aaaaaatgaaagaaagagaaaattgaatgtaa 25737766  T
Q  217 tttgcatttaattttacgagaataac 242  Q
    |||||||||||||||| |||||||||    
T  25737767 tttgcatttaattttatgagaataac 25737792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 45486099 - 45485950
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    ||||| |||||||||||||       ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||            
T  45486099 cataaaaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaataattttcattggctattggttatgg--aaaaaa 45486002  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  45486001 tgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac 45485950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 117 - 242
Target Start/End: Complemental strand, 35923370 - 35923247
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||    
T  35923370 gtgttttctttggaaaaagttttatagaaagatgtaaaaacaattttcattggctattggttatgg--aaaaaatgaaagaaagagaaaattgaatgtaa 35923273  T
Q  217 tttgcatttaattttacgagaataac 242  Q
    |||||||||||||||| |||||||||    
T  35923272 tttgcatttaattttatgagaataac 35923247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 14806013 - 14805865
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||            
T  14806013 cataagaatttggagtatagttttttgtattttctttg-aaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg--aaaaaa 14805917  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  14805916 tgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac 14805865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 15253007 - 15252859
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||            
T  15253007 cataagaatttggagtatagttttttgtattttctttg-aaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg--aaaaaa 15252911  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  15252910 tgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac 15252859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 92 - 241
Target Start/End: Complemental strand, 25944719 - 25944572
Alignment:
Q  92 ataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnnt 191  Q
    ||||||||||||||||||       ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||        |    
T  25944719 ataagaatttggagtataagtttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggccattggttatgg--aaaaaat 25944622  T
Q  192 gaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
     ||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  25944621 aaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 25944572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 91 - 242
Target Start/End: Original strand, 19912785 - 19912934
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||| || || ||||||||||||||||||| ||||||||||||            
T  19912785 cataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagtaaaatgtaaaaacaattttcattggttattggttatgg--aaaaaa 19912882  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||||||    
T  19912883 tgaaagaaagagaaaattgaatgtaatttgcatttaatttcatgagaataac 19912934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 18102674 - 18102526
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       |||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||            
T  18102674 cataagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggccattggttatgg--aaaaaa 18102577  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| || ||| ||||||||||||||||||||||||||| ||||||||    
T  18102576 tgaaagagagtgaaaattgaatgtaatttgcatttaattttatgagaataa 18102526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 91 - 241
Target Start/End: Original strand, 20123696 - 20123844
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       |||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||            
T  20123696 cataagaatttggagtatagttttttgtgtattctttggaaaaagttttatagcaagatgtaaaaacaattttcattggctattgcttatgg--aaaaaa 20123793  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| | |||| ||||||||||||||||||||||||||| ||||||||    
T  20123794 tgaaagagaaagaaaattgaatgtaatttgcatttaattttatgagaataa 20123844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 6191189 - 6191041
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||            
T  6191189 cataagaatttggagtatagttttttgtgttttcttttaaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg--agaaaa 6191092  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| ||| || ||| |||||||||| |||||||||||| ||||||||    
T  6191091 tgaaagagagataaaattaaatgtaattttcatttaattttatgagaataa 6191041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 4910675 - 4910797
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||| ||||||        ||||||| ||| || |||||||||||    
T  4910675 gtgttttctttagaaaaagttttataggaagatgtaaaaataattttcattggctattgattatgg--aaaaaatgaaagagagataaaattgaatgtaa 4910772  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||||| ||| ||||    
T  4910773 tttgcatttaattttatgagcataa 4910797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 12632360 - 12632445
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattgg 176  Q
    |||||||||||||||||||        ||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||    
T  12632360 cataagaatttggagtatagttttttatgttttctttgaaaaaagtttcataggaagatgtaaaaacaattttcattggctattgg 12632445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 22632207 - 22632085
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    |||||||||||| || |||||| || ||||||| ||||||||||||||||||| ||||||||||||        || |||| |||||| ||| |||||||    
T  22632207 gtgttttctttgaaataagtttcatgggaagatgtaaaaacaattttcattggatattggttatgg--aaaaaatggaagagagagaaaattaaatgtaa 22632110  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||| | ||||||||    
T  22632109 tttgcatttaatttcatgagaataa 22632085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 35068891 - 35068954
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  35068891 gtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttaattagctattggttat 35068954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 47779722 - 47779600
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||| ||| |||||| || ||||||| |||||||||||||||||||| | |||||||||        | |||||||||||| ||| |||||||    
T  47779722 gtgttttctttagaataagtttcatgggaagatgtaaaaacaattttcattggcaactggttatgg--aaaaaataaaagaaagagaaaattaaatgtaa 47779625  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||| | ||||||||    
T  47779624 tttgcatttaatttcatgagaataa 47779600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 92 - 241
Target Start/End: Complemental strand, 44683020 - 44682874
Alignment:
Q  92 ataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnnt 191  Q
    ||||||||||||||||||       ||||||| ||||||| |||||| ||  |||||| |||||||||||||||||| |||||||||||||        |    
T  44683020 ataagaatttggagtataatattttgtgttttttttggaataagtttgatgcgaagatgtaaaaacaattttcattgactattggttatgg---agaaat 44682924  T
Q  192 gaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    |||||| | |||| |||| |||||||||||| ||||||| | ||||||||    
T  44682923 gaaagatatagaaaattggatgtaatttgcaattaatttcatgagaataa 44682874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 9158194 - 9158143
Alignment:
Q  130 aaaaagttttataggaagatataaaaacaattttcattggctattggttatg 181  Q
    |||||||||||||||||||| |||||||||||||| ||||| ||||||||||    
T  9158194 aaaaagttttataggaagatgtaaaaacaattttctttggccattggttatg 9158143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 47557663 - 47557765
Alignment:
Q  137 tttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttgcatttaattttacgag 236  Q
    ||||||||||||| ||||||||||||||||||||||||  ||||||        ||||||| | |||| ||| |||||||||||||||||||| || |||    
T  47557663 tttataggaagatgtaaaaacaattttcattggctattaattatgg--aaaaaatgaaagagaaagaaaattaaatgtaatttgcatttaattctatgag 47557760  T
Q  237 aataa 241  Q
    |||||    
T  47557761 aataa 47557765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 16917586 - 16917525
Alignment:
Q  120 ttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatg 181  Q
    |||||||||||| |||||| || ||||||| |||||||||||||||||  ||||||||||||    
T  16917586 ttttctttggaataagtttcatgggaagatgtaaaaacaattttcattaactattggttatg 16917525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 4069108 - 4069056
Alignment:
Q  130 aaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    |||||||||||||| ||||| |||||| |||||||||||| ||||||||||||    
T  4069108 aaaaagttttatagaaagatgtaaaaagaattttcattggttattggttatgg 4069056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 31549947 - 31550010
Alignment:
Q  119 gttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    ||||||||| ||| || |||||||||||||| ||||||||| |||||||| | |||||||||||    
T  31549947 gttttctttagaataaattttataggaagatgtaaaaacaactttcattgacaattggttatgg 31550010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 12633110 - 12633151
Alignment:
Q  200 gagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||| ||||||||||||||||||||||||||| ||||||||    
T  12633110 gagaaaattgaatgtaatttgcatttaattttatgagaataa 12633151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 31769010 - 31769055
Alignment:
Q  123 tctttggaaaaagttttataggaagatataaaaacaattttcattg 168  Q
    |||||| || ||||||||||||||||| ||||||||||||||||||    
T  31769010 tctttgaaataagttttataggaagatgtaaaaacaattttcattg 31769055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 11780061 - 11780014
Alignment:
Q  194 aagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||||||| |||  |||||||||||||||||||||| ||||||||    
T  11780061 aagaaagagaaaatttgatgtaatttgcatttaattttatgagaataa 11780014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 24151640 - 24151687
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    ||||||||||||||||| ||||||||||||||| ||  ||||||||||    
T  24151640 aagttttataggaagatgtaaaaacaattttcactgattattggttat 24151687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 2610617 - 2610675
Alignment:
Q  124 ctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    |||||||| ||  ||||||| ||||| |||||||| ||||| |||||||||||||||||    
T  2610617 ctttggaataaaatttatagaaagatgtaaaaacatttttctttggctattggttatgg 2610675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 35888011 - 35888061
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcatt 167  Q
    ||||| |||||| || || |||||||||||||| |||||||||||||||||    
T  35888011 gtgttatctttgaaataacttttataggaagatgtaaaaacaattttcatt 35888061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 48413820 - 48413771
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    |||||||||  ||||||  ||||||||||||||||| |||||||||||||    
T  48413820 aagttttatgagaagatgcaaaaacaattttcattgactattggttatgg 48413771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 10248630 - 10248594
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  10248630 aagttttatagaaagatgtaaaaacaattttcattgg 10248594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 14574707 - 14574618
Alignment:
Q  92 ataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatg 181  Q
    ||||||||||||||||||       ||||||||||   || |||||| || ||||||| |||||| ||||| ||||| ||||||||||||    
T  14574707 ataagaatttggagtatagttttttgtgttttcttgataataagtttcatgggaagatgtaaaaataatttccattgtctattggttatg 14574618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 3e-43; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 47868021 - 47867872
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||            
T  47868021 cataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg--aaaaaa 47867924  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  47867923 tgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac 47867872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 20281733 - 20281585
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||            
T  20281733 cataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg--aaaaaa 20281636  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||||| |||| ||||||||||||||||||||||||||| ||||||||    
T  20281635 tgaaagaaaaagaaaattgaatgtaatttgcatttaattttatgagaataa 20281585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 2229389 - 2229240
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||            
T  2229389 cataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttttattggctattggttatgg--aaaaaa 2229292  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
    ||||||||| |||| ||||||||||||||||||||||| ||| |||||||||    
T  2229291 tgaaagaaaaagaaaattgaatgtaatttgcatttaatattatgagaataac 2229240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 4058857 - 4058709
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       |||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||            
T  4058857 cataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggttattggttatgg--aaaaaa 4058760  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| |||||| |||||||| |||||||||||||||||| ||||||||    
T  4058759 tgaaagagagagaaaattgaatgaaatttgcatttaattttatgagaataa 4058709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 14332876 - 14332754
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||         |||||||||||||| |||||||||||    
T  14332876 gtgttttctttggaaaaagttttataggaagatgtaaaaacaatttttattggccattggttatg--aaaaaaatgaaagaaagagaaaattgaatgtaa 14332779  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||||| ||||||||    
T  14332778 tttgcatttaattttatgagaataa 14332754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 26916467 - 26916319
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    ||||||||||||||||||        |||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||            
T  26916467 cataagaatttggagtatggttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatttttattggctattggttatgg--aaaaaa 26916370  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||||    
T  26916369 tgaaagaaaaataaaattgaatgtaatttgcatttaattttatgagaataa 26916319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 29203648 - 29203500
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       |||||||||||| |||   |||||||||||||| ||||||||||||||||||||||||||||||||            
T  29203648 cataagaatttggagtataattttttgtgttttctttgcaaatttttttataggaagatgtaaaaacaattttcattggctattggttatgg--aaaaaa 29203551  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  29203550 tgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 29203500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 55580812 - 55580663
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||        |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||            
T  55580812 cataagaatttggagtatagttttttttgttttctttggaaaaagttgtataggaagatgtaaaaacaattttcattggctattagttatgg-aaaaaaa 55580714  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||||||||||  || ||||||||||||||||||||||| ||||||||    
T  55580713 tgaaagaaagagaaattttaatgtaatttgcatttaattttatgagaataa 55580663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 91 - 219
Target Start/End: Complemental strand, 7654759 - 7654633
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    ||||| |||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||            
T  7654759 cataaaaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattgattatgg--aaaaaa 7654662  T
Q  191 tgaaagaaagagaatattgaatgtaattt 219  Q
    |||||||||||||| ||||||||||||||    
T  7654661 tgaaagaaagagaaaattgaatgtaattt 7654633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 120 - 241
Target Start/End: Complemental strand, 20716293 - 20716174
Alignment:
Q  120 ttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaattt 219  Q
    |||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||        |||||||  ||||| ||||||||||||||    
T  20716293 ttttgtttggaaaaagttttatagaaagatgtaaaaacaattttcattggctattggttatgg--aaaaaatgaaagagtgagaaaattgaatgtaattt 20716196  T
Q  220 gcatttaattttacgagaataa 241  Q
    ||||||||||||| ||||||||    
T  20716195 gcatttaattttatgagaataa 20716174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 56318106 - 56318228
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||        ||||||| |||||| |||||||||||    
T  56318106 gtgttttctttggaaaaaggtttataggaagatgtaaaaacaattttcattagctattggttatgg--aaaaaatgaaagagagagaaaattgaatgtaa 56318203  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    ||| |||||||||||| || |||||    
T  56318204 tttacatttaattttatgataataa 56318228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 39078298 - 39078151
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||| |            
T  39078298 cataagaatttggagtatagttttttgtgttttctttggaaaaagttttatag-aagatgtaaaaacaattttcattggctattagttattg--aaaaaa 39078202  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| | |||| |||||||||||| |||||||||||||| ||||||||    
T  39078201 tgaaagagaaagaaaattgaatgtaatgtgcatttaattttatgagaataa 39078151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 91 - 241
Target Start/End: Original strand, 41414621 - 41414768
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    ||||||||| |||||||||       |||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||             
T  41414621 cataagaatatggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatttttattggctattgattatg---aaaaaa 41414717  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| ||| || |||||||||||||||||||||||||||  |||||||    
T  41414718 tgaaagagagaaaaaattgaatgtaatttgcatttaattttataagaataa 41414768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 120 - 241
Target Start/End: Complemental strand, 10069810 - 10069691
Alignment:
Q  120 ttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaattt 219  Q
    ||||||| | |||||||||||||| ||||| ||||||||||||||||||||||||||||||||        |||||||||  ||| ||||||||| ||||    
T  10069810 ttttcttcgaaaaaagttttatagaaagatgtaaaaacaattttcattggctattggttatgg--aaaaagtgaaagaaaaggaaaattgaatgttattt 10069713  T
Q  220 gcatttaattttacgagaataa 241  Q
    ||||||||||||| ||||||||    
T  10069712 gcatttaattttatgagaataa 10069691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 119 - 241
Target Start/End: Original strand, 17794579 - 17794699
Alignment:
Q  119 gttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatt 218  Q
    |||||||||| || || |||||||||||||| ||||||||||||||||||||||||| ||||||        || |||| |||||| |||||||||||||    
T  17794579 gttttctttgaaataaattttataggaagatgtaaaaacaattttcattggctattgattatgg--aaaaattggaagagagagaaaattgaatgtaatt 17794676  T
Q  219 tgcatttaattttacgagaataa 241  Q
    | |||||||||||| ||||||||    
T  17794677 tacatttaattttatgagaataa 17794699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 93 - 232
Target Start/End: Complemental strand, 24940505 - 24940368
Alignment:
Q  93 taagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntg 192  Q
    |||||||||||||||||       || ||||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||||||||        ||    
T  24940505 taagaatttggagtatagttttttgtattttctttggaaaaagttttataagaagatgtaaaaacaattttcgttggttattggttatgg--agaaaatg 24940408  T
Q  193 aaagaaagagaatattgaatgtaatttgcatttaatttta 232  Q
    ||||| |||||| ||| |||||||||| ||||||||||||    
T  24940407 aaagagagagaaaattaaatgtaatttccatttaatttta 24940368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 28669037 - 28669158
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||| ||||| |||||||||||| || ||||||||||||||||||| |||| ||||||         ||||||| |||||| |||||||||||    
T  28669037 gtgttttctttagaaaaggttttataggaaaatgtaaaaacaattttcattggttattagttatg---aaaaaatgaaagagagagaaaattgaatgtaa 28669133  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||| ||||||||||| ||||||||    
T  28669134 tttgtatttaattttatgagaataa 28669158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 91 - 182
Target Start/End: Original strand, 16604856 - 16604947
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    ||||||||||| |||||||       |||||||||||| |||||||||||||||||||| | |||||||||||||||||||||| |||||||    
T  16604856 cataagaatttagagtatagttttttgtgttttctttgaaaaaagttttataggaagatgttaaaacaattttcattggctattagttatgg 16604947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 5483314 - 5483436
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    |||||||||||  || |||||| |||||||||| |||||||||||||||||||||| |||||||||        || |||| |||||| |||||||||||    
T  5483314 gtgttttctttaaaataagtttaataggaagatgtaaaaacaattttcattggctactggttatgg--agaaaatggaagagagagaaaattgaatgtaa 5483411  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    | |||||||||||| | ||||||||    
T  5483412 tatgcatttaatttcatgagaataa 5483436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 42915646 - 42915523
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||||||| |||||| || | ||||| |||||||||||||||||||| |||||||||||        | ||||| |||||| ||| |||||||    
T  42915646 gtgttttctttggaataagtttcatggaaagatgtaaaaacaattttcattggcaattggttatgg-aaaaaaataaaagagagagaaaattaaatgtaa 42915548  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||| | ||||||||    
T  42915547 tttgcatttaatttcatgagaataa 42915523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 48793664 - 48793728
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatg 181  Q
    ||||||||||||||| |||||| || ||||||| |||||||||||||||||||| ||||||||||    
T  48793664 gtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcattggcaattggttatg 48793728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 35310778 - 35310900
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||| ||| |||||| || | ||||| ||||||||||||||||||||||||||||||||        || |||| |||||| ||| |||||||    
T  35310778 gtgttttctttagaataagtttcatggaaagatgtaaaaacaattttcattggctattggttatgg--aaaaaatggaagagagagaaaattaaatgtaa 35310875  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||| ||||||||| | ||||||||    
T  35310876 tttgtatttaatttcatgagaataa 35310900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 1585383 - 1585505
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    |||||||||||| || |||||| || | ||||| | ||||||||||| ||||||||||| ||||||        || |||| |||||| |||||||||||    
T  1585383 gtgttttctttgaaataagtttcatggaaagatgttaaaacaatttttattggctattgattatggagaaaa--tggaagagagagaaaattgaatgtaa 1585480  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    ||| |||||||||||| ||||||||    
T  1585481 ttttcatttaattttatgagaataa 1585505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 46070558 - 46070621
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    ||||| |||||| || ||||||||||||||||| ||||||||||||||||||| | ||||||||    
T  46070558 gtgttgtctttgaaataagttttataggaagatgtaaaaacaattttcattggttgttggttat 46070621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 241
Target Start/End: Original strand, 52535626 - 52535743
Alignment:
Q  119 gttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatt 218  Q
    ||||||||| |||||| |||||||  |||   |||||| ||||||||||||||||||||||| |        ||||||| |||||| ||||||| |||||    
T  52535626 gttttctttagaaaaatttttatataaag---taaaaataattttcattggctattggttatagaaaaag--tgaaagagagagaaaattgaatataatt 52535720  T
Q  219 tgcatttaattttacgagaataa 241  Q
    |||||||||||||| ||||||||    
T  52535721 tgcatttaattttatgagaataa 52535743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 50145848 - 50145794
Alignment:
Q  121 tttctttggaaaaagttttataggaagatataaaaacaattttcattggctattg 175  Q
    ||||||||||| ||||||||| ||||||| |||| ||||||||||||||||||||    
T  50145848 tttctttggaataagttttatgggaagatgtaaacacaattttcattggctattg 50145794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 21722719 - 21722776
Alignment:
Q  118 tgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattg 175  Q
    ||||||||||| || ||||||||||||||||| |||||| ||||||||||| ||||||    
T  21722719 tgttttctttgtaataagttttataggaagatgtaaaaataattttcattgactattg 21722776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 32203325 - 32203277
Alignment:
Q  121 tttctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||||    
T  32203325 tttctttgaaataagttttatgggaagatataaaaacaattttcattgg 32203277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 145 - 241
Target Start/End: Complemental strand, 35529760 - 35529666
Alignment:
Q  145 aagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||| ||||||||||||||||||| ||||||||||||        ||||||| ||| || |||||| |||||||||||||||||||| ||| ||||    
T  35529760 aagatgtaaaaacaattttcattgggtattggttatgg--aaaaaatgaaagagagataaaattgaaagtaatttgcatttaattttatgagcataa 35529666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 47516227 - 47516290
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    ||||| |||||| || ||||||||||||||||  ||||||||||||||||||| | ||||||||    
T  47516227 gtgttatctttgaaataagttttataggaagaagtaaaaacaattttcattggttgttggttat 47516290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 17186850 - 17186896
Alignment:
Q  136 ttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    |||||||||||||| |||||| || ||||||||||||||||||||||    
T  17186850 ttttataggaagatgtaaaaataagtttcattggctattggttatgg 17186896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 169
Target Start/End: Complemental strand, 49080367 - 49080321
Alignment:
Q  123 tctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    |||||| || ||||||||||||||||| |||||||||||||||||||    
T  49080367 tctttgaaataagttttataggaagatgtaaaaacaattttcattgg 49080321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 8683342 - 8683407
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    ||||||||||||||| |||||| || | || || |||||| ||||||||||||| |||||||||||    
T  8683342 gtgttttctttggaataagtttcatggaaatatgtaaaaataattttcattggcaattggttatgg 8683407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 5841834 - 5841878
Alignment:
Q  136 ttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||    
T  5841834 ttttataggaagatgtaaaaataattttcattggttattggttat 5841878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 16473889 - 16473832
Alignment:
Q  92 ataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagat 149  Q
    ||||||||||||||||||       |||||||||||| ||||||||||||||||||||    
T  16473889 ataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagat 16473832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 17799187 - 17799235
Alignment:
Q  134 agttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    |||||||| ||||||| ||||||||||||||||||| |||| |||||||    
T  17799187 agttttatgggaagatgtaaaaacaattttcattggttatttgttatgg 17799235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 8178275 - 8178338
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    ||||| |||||| || |||||||||| |||||| ||||||||||||  ||||| ||||||||||    
T  8178275 gtgttatctttgaaataagttttataagaagatgtaaaaacaatttgtattggttattggttat 8178338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 168
Target Start/End: Complemental strand, 29511525 - 29511490
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattg 168  Q
    ||||||||||||||||| ||||||||||||||||||    
T  29511525 aagttttataggaagatgtaaaaacaattttcattg 29511490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 32410444 - 32410393
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattg 168  Q
    ||||| |||||| || ||||||||||||||||| |||||| |||||||||||    
T  32410444 gtgttatctttgaaataagttttataggaagatgtaaaaataattttcattg 32410393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 5064691 - 5064741
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcatt 167  Q
    ||||| |||||| || |||||||| |||||||| |||||||||||||||||    
T  5064691 gtgttatctttgaaataagttttaaaggaagatgtaaaaacaattttcatt 5064741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 169
Target Start/End: Original strand, 23978169 - 23978203
Alignment:
Q  135 gttttataggaagatataaaaacaattttcattgg 169  Q
    ||||||||||||||| |||||||||||||||||||    
T  23978169 gttttataggaagatgtaaaaacaattttcattgg 23978203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 25297261 - 25297323
Alignment:
Q  120 ttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    |||| |||| || |||||| || | ||||| ||||||||||||||||||||||||| ||||||    
T  25297261 ttttttttgtaataagtttcatggaaagatgtaaaaacaattttcattggctattgattatgg 25297323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 5815585 - 5815520
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    |||||||||||| || |||||||||  |||||| |||||| |||||| |||| |||||| ||||||    
T  5815585 gtgttttctttgaaataagttttatgagaagatgtaaaaataatttttattgactattgattatgg 5815520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 19351964 - 19351899
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatat-aaaaacaattttcattggctattggttatg 181  Q
    |||||||| ||| || |||||| || ||||||| | ||||||||||||||||||||||| ||||||    
T  19351964 gtgttttcattgaaataagtttcatgggaagatgttaaaaacaattttcattggctattagttatg 19351899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 28142674 - 28142710
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  28142674 aagttttataggaggatgtaaaaacaattttcattgg 28142710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 28318473 - 28318505
Alignment:
Q  137 tttataggaagatataaaaacaattttcattgg 169  Q
    ||||||||||||| |||||||||||||||||||    
T  28318473 tttataggaagatgtaaaaacaattttcattgg 28318505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 8e-41; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 91 - 242
Target Start/End: Original strand, 11082262 - 11082411
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||            
T  11082262 cataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagggagatgtaaaaacaattttcattggctattggttatgg--aaaaaa 11082359  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  11082360 tgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac 11082411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 91 - 242
Target Start/End: Original strand, 35129071 - 35129221
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataa-aaacaattttcattggctattggttatggnnnnnnn 189  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||           
T  35129071 cataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaataaacaattttcattggttattggttatgg--aaaaa 35129168  T
Q  190 ntgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35129169 atgaaagaaagagaaaattgaatgtaatttgcatttaattttacgagaataac 35129221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 21542562 - 21542413
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||            
T  21542562 cataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttttattggctattggttatgg--aaaaaa 21542465  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
    ||||||||| |||| ||||||||||||||||||||||| ||| |||||||||    
T  21542464 tgaaagaaaaagaaaattgaatgtaatttgcatttaatattatgagaataac 21542413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 91 - 242
Target Start/End: Original strand, 3095737 - 3095885
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    ||||| |||||||||||||       ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||            
T  3095737 cataaaaatttggagtatagttttttgtgttttctttggaaaa-gttttataggaagatgtaaaaacaattttcattggctattgattatgg--aaaaaa 3095833  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
    ||||| |||||||| ||||||||||||||||||||||||||| |||||||||    
T  3095834 tgaaataaagagaaaattgaatgtaatttgcatttaattttatgagaataac 3095885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 91 - 242
Target Start/End: Original strand, 34177658 - 34177807
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||| ||||       ||||||||||||||||||  |||||||| |||| ||||||||||||||||||||||||||||||||            
T  34177658 cataagaatttggaatatagttttttgtgttttctttggaaaaaaatttatagggagatgtaaaaacaattttcattggctattggttatgg--aaaaaa 34177755  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
    |||||||||||||  ||||||||||||||||||||||||||| |||||||||    
T  34177756 tgaaagaaagagataattgaatgtaatttgcatttaattttatgagaataac 34177807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 120 - 241
Target Start/End: Original strand, 7274921 - 7275040
Alignment:
Q  120 ttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaattt 219  Q
    |||||||||||| |||||| || ||||||| ||||||||||||||||||||||||||||||||        ||||||| |||||| ||| ||||||||||    
T  7274921 ttttctttggaataagtttcatgggaagatgtaaaaacaattttcattggctattggttatgg--aaaaaatgaaagagagagaaaattaaatgtaattt 7275018  T
Q  220 gcatttaattttacgagaataa 241  Q
    | ||||||||| | ||||||||    
T  7275019 gtatttaatttcatgagaataa 7275040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 30794236 - 30794300
Alignment:
Q  118 tgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    |||||| ||||||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||    
T  30794236 tgttttatttggaataagttttataggaagatgtaaaaacatttttcattggctattggtgatgg 30794300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 12461474 - 12461537
Alignment:
Q  120 ttttctttggaaaaagtttt-ataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    ||||||||| || ||||||| |||| ||||| ||||||||||||||||||||||||||||||||    
T  12461474 ttttctttgaaataagtttttatagaaagatgtaaaaacaattttcattggctattggttatgg 12461537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 16524495 - 16524443
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||| |||||| || ||||||||||||||||| |||||||||||||||||||    
T  16524495 gtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattgg 16524443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 5300659 - 5300701
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattg 175  Q
    ||||||||||||||||| ||||||||||||||||||| |||||    
T  5300659 aagttttataggaagatgtaaaaacaattttcattggttattg 5300701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 16013481 - 16013527
Alignment:
Q  123 tctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    |||||| || ||||||||||||||||| |||||||||||||||||||    
T  16013481 tctttgaaataagttttataggaagatgtaaaaacaattttcattgg 16013527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 4032103 - 4032051
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||| |||||| || ||||||||| ||||||| |||||||||||||||||||    
T  4032103 gtgttatctttgaaataagttttatcggaagatgtaaaaacaattttcattgg 4032051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 4988059 - 4988007
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||| |||||| || ||||||||||||||||| |||||| ||||||||||||    
T  4988059 gtgttatctttgaaataagttttataggaagatgtaaaaataattttcattgg 4988007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 3e-40; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 91 - 241
Target Start/End: Original strand, 34890192 - 34890340
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||            
T  34890192 cataagaatttggagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg--aaaaaa 34890289  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  34890290 tgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 34890340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 91 - 242
Target Start/End: Original strand, 7022421 - 7022570
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    ||||| |||||||||||||       |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||            
T  7022421 cataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatataaaaataattttcattggctattggttatgg--aaaaaa 7022518  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  7022519 tgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac 7022570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 31734255 - 31734109
Alignment:
Q  93 taagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntg 192  Q
    |||||||||||||||||       |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||        ||    
T  31734255 taagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggatatgg--aaaaaatg 31734158  T
Q  193 aaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||| |||||| ||||||||||||||||||||||||| | ||||||||    
T  31734157 aaagagagagaaaattgaatgtaatttgcatttaatttgatgagaataa 31734109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 26483674 - 26483525
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||| ||||||       |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||| ||||||            
T  26483674 cataagaatttgaagtatagttttttgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattttcattggctattgattatgg--aaaaaa 26483577  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  26483576 tgaaagaaagagaaaattgaatgtaatttacatttaattttacgagaataac 26483525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 28348752 - 28348605
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       || ||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||            
T  28348752 cataagaatttggagtatagtattttgtattttctttggaaaaagttttataggaatatgtaaaaacaatttccattggctattggttatgg---aaaaa 28348656  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  28348655 tgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 28348605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 36190914 - 36190766
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    ||||||||||| |||||||       |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||            
T  36190914 cataagaatttagagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg--aaaaaa 36190817  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    | ||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  36190816 taaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 36190766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 91 - 241
Target Start/End: Original strand, 43216365 - 43216513
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       |||||||||||| |||||||||||||||||||| |||||||||||||||||  |||||||||||||            
T  43216365 cataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattcactattggttatgg--agaaaa 43216462  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| ||| || ||| ||||||||||||||||||||||| ||||||||    
T  43216463 tgaaagagagataaaattaaatgtaatttgcatttaattttatgagaataa 43216513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 24892983 - 24892832
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataa---aaacaattttcattggctattggttatggnnnnn 187  Q
    ||||||||||| |||||||       ||||||||||||||||| ||||||||||| |||||||   |||||||||||||||||||||||||||||         
T  24892983 cataagaatttagagtatagttttttgtgttttctttggaaaacgttttataggaggatataataaaaacaattttcattggctattggttatgg--aaa 24892886  T
Q  188 nnntgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
       ||||||| | |||| ||||||||||||||||||||||||||| ||||||||    
T  24892885 aaatgaaagagatagaaaattgaatgtaatttgcatttaattttatgagaataa 24892832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 7858670 - 7858522
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       ||||||| |||| |||||||||||||||||||| |||||||||||||||||| | |||| ||||||            
T  7858670 cataagaatttggagtatagttttttgtgttttatttgaaaaaagttttataggaagatgtaaaaacaattttcattgaccattgattatgg--aaaaaa 7858573  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| |||||| |||||| |||||||||||||||||||| ||||||||    
T  7858572 tgaaagagagagaaaattgaaagtaatttgcatttaattttatgagaataa 7858522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 125 - 231
Target Start/End: Complemental strand, 8711985 - 8711881
Alignment:
Q  125 tttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttgcatt 224  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||        | ||||| |||||| |||||||||||||||||||    
T  8711985 tttggaaaaagttttataggaagatgtaaaaataattttcattggctattggttatgg--aaaaaattaaagagagagaaaattgaatgtaatttgcatt 8711888  T
Q  225 taatttt 231  Q
    |||||||    
T  8711887 taatttt 8711881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 120 - 241
Target Start/End: Original strand, 8107665 - 8107783
Alignment:
Q  120 ttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaattt 219  Q
    ||||||||| ||||||||||| |  | ||| ||||||||||||||||||||||||||||||||        ||||||| |||||| ||||||||||||||    
T  8107665 ttttctttgaaaaaagttttacaatatgatgtaaaaacaattttcattggctattggttatgg---ataaatgaaagagagagaaaattgaatgtaattt 8107761  T
Q  220 gcatttaattttacgagaataa 241  Q
    ||||||||||||| ||||||||    
T  8107762 gcatttaattttatgagaataa 8107783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 15957955 - 15958079
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    |||||||||||| ||||||||||||||||| |  ||||||||||||||||| ||||||||||||||          | ||| |||||| |||||||||||    
T  15957955 gtgttttctttgaaaaaagttttataggaataagtaaaaacaattttcatttgctattggttatggaaaaaatgaaagagagagagaaaattgaatgtaa 15958054  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||||| ||||||||    
T  15958055 tttgcatttaattttatgagaataa 15958079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 13143880 - 13143758
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    |||||||| ||| ||||||||| |||||||||| ||||||||||||||||||||| |||||| |||        ||||||| ||| || |||||||||||    
T  13143880 gtgttttcgttgaaaaaagtttcataggaagatgtaaaaacaattttcattggctgttggttgtgg--gaaaaatgaaagagagaaaaaattgaatgtaa 13143783  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||||| ||||||||    
T  13143782 tttgcatttaattttatgagaataa 13143758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 41086430 - 41086552
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    |||||||||||| |||||||||||||  ||||| ||||||||||||||||||||||||||| ||||        | ||| | |||||| ||| |||||||    
T  41086430 gtgttttctttgaaaaaagttttatataaagatgtaaaaacaattttcattggctattggtaatgg--aaaaaataaaacagagagaaaattcaatgtaa 41086527  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||||| ||||||||    
T  41086528 tttgcatttaattttatgagaataa 41086552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 35525703 - 35525638
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    |||||||||||| ||||||||||| |||||||| |||||||||||||||||| |||||||||||||    
T  35525703 gtgttttctttgaaaaaagttttacaggaagatgtaaaaacaattttcattgactattggttatgg 35525638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 144 - 241
Target Start/End: Complemental strand, 7499816 - 7499720
Alignment:
Q  144 gaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    |||||| ||||||||||||||||||||||||||||||||        ||||||| |||||| |||||||||||||| |||||||||||| ||||||||    
T  7499816 gaagatgtaaaaacaattttcattggctattggttatggaaaaaaa-tgaaagagagagaaaattgaatgtaatttacatttaattttatgagaataa 7499720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 130 - 241
Target Start/End: Original strand, 34158348 - 34158457
Alignment:
Q  130 aaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttgcatttaatt 229  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||           ||||| |||||| ||||||||||||||||||||||||    
T  34158348 aaaaagttttataggaagatgtaaaaacaattttcattgactattggttatgaaaaaaaca--aaagagagagaaaattgaatgtaatttgcatttaatt 34158445  T
Q  230 ttacgagaataa 241  Q
    ||| || |||||    
T  34158446 ttatgataataa 34158457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 91 - 182
Target Start/End: Original strand, 13143963 - 13144055
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaa-agttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    |||||||||||||||||||       |||||||||||| |||| |||||||||||||||| ||||||||||||||||| | ||||||||||||    
T  13143963 cataagaatttggagtatagttttttgtgttttctttgaaaaaaagttttataggaagatgtaaaaacaattttcattagttattggttatgg 13144055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 129 - 241
Target Start/End: Original strand, 35456080 - 35456190
Alignment:
Q  129 gaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttgcatttaat 228  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||        | ||||| |||||| | |||||||||||| ||||||||    
T  35456080 gaaaaagttttatagaaagatgtaaaaacaattttcattggctattaattatgg--aaaaaataaaagagagagaaaaatgaatgtaatttacatttaat 35456177  T
Q  229 tttacgagaataa 241  Q
    |||| ||||||||    
T  35456178 tttatgagaataa 35456190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 29920312 - 29920377
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    ||||| ||||||||| |||||| || ||||||| ||||||||||||||||||||||||| ||||||    
T  29920312 gtgttatctttggaataagtttcatgggaagatgtaaaaacaattttcattggctattgattatgg 29920377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 17713323 - 17713276
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  17713323 aagttttataggaagatttaaaaacaattttcattggttattggttat 17713276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 2052937 - 2052891
Alignment:
Q  130 aaaaagttttataggaagatataaaaacaattttcattggctattgg 176  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||    
T  2052937 aaaaagttttatgggaagatgtaaaaacaattttcattggctattgg 2052891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 26954441 - 26954499
Alignment:
Q  122 ttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    ||||||| || ||||||||||||||||| ||||||||||||||||||| | ||||||||    
T  26954441 ttctttgaaataagttttataggaagatgtaaaaacaattttcattggttgttggttat 26954499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 30575878 - 30575944
Alignment:
Q  117 gtgttttctttggaaaaagtttt-ataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    |||||||||||  |||||||||| | ||||| || ||||||||||||||||||||||||||||||||    
T  30575878 gtgttttctttaaaaaaagtttttacaggaaaatgtaaaaacaattttcattggctattggttatgg 30575944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 3642039 - 3642126
Alignment:
Q  142 aggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttgcatttaatttta 232  Q
    |||||||| ||||||||||||| ||||||||||||||||||        ||||||| |||||| |||||||||||||||||||| ||||||    
T  3642039 aggaagatgtaaaaacaatttt-attggctattggttatggaaaaaa--tgaaagagagagaaaattgaatgtaatttgcattttatttta 3642126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 41362351 - 41362403
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||| |||||| || ||||||||||||||||| |||||||||||||||||||    
T  41362351 gtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattgg 41362403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 16358157 - 16358219
Alignment:
Q  118 tgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatg 181  Q
    ||||||||||| ||||||||| |||||||||| ||||| |||||||||||| |||||| |||||    
T  16358157 tgttttctttg-aaaaagtttcataggaagatgtaaaatcaattttcattgactattgattatg 16358219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 241
Target Start/End: Original strand, 8709908 - 8709950
Alignment:
Q  199 agagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    |||||| ||||||||||||||||||||||||||| ||||||||    
T  8709908 agagaaaattgaatgtaatttgcatttaattttatgagaataa 8709950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 8745683 - 8745647
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||||||||||||||| |||||||||||||||||||    
T  8745683 aagttttataggaagatgtaaaaacaattttcattgg 8745647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 2628224 - 2628271
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    ||||||||||||||||| |||||| |||||||||||| ||||| ||||    
T  2628224 aagttttataggaagatgtaaaaataattttcattggttattgcttat 2628271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 4046938 - 4047060
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    |||||||||||  || |||||| || | || || |||||| ||||||||||||| |||||||||||        | ||||| |||||| ||| |||||||    
T  4046938 gtgttttctttataataagtttcatggaaatatgtaaaaataattttcattggcaattggttatggaaaaaa--taaaagagagagaaaattaaatgtaa 4047035  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||| | ||||||||    
T  4047036 tttgcatttaatttcatgagaataa 4047060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 199 - 241
Target Start/End: Complemental strand, 2052872 - 2052830
Alignment:
Q  199 agagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    |||||| ||||||||||||||||||||||||| | ||||||||    
T  2052872 agagaaaattgaatgtaatttgcatttaatttcatgagaataa 2052830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 8712631 - 8712577
Alignment:
Q  126 ttggaaaaagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    |||||| ||||||||||| ||||| ||||||||||||| ||||| |||| |||||    
T  8712631 ttggaataagttttatagaaagatgtaaaaacaatttttattggttattagttat 8712577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 199 - 241
Target Start/End: Original strand, 13144085 - 13144127
Alignment:
Q  199 agagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    |||||| ||||||||||||||||||||||||||| || |||||    
T  13144085 agagaaaattgaatgtaatttgcatttaattttatgaaaataa 13144127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 169
Target Start/End: Complemental strand, 17336852 - 17336806
Alignment:
Q  123 tctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    |||||| || || |||||||||||||| |||||||||||||||||||    
T  17336852 tctttgaaataaattttataggaagatgtaaaaacaattttcattgg 17336806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 44663833 - 44663891
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattg 175  Q
    ||||||||||||||| || |||||| | ||||| |||||| |||||| |||||||||||    
T  44663833 gtgttttctttggaataaattttatggaaagatgtaaaaataatttttattggctattg 44663891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 25195109 - 25195142
Alignment:
Q  136 ttttataggaagatataaaaacaattttcattgg 169  Q
    |||||||||||||| |||||||||||||||||||    
T  25195109 ttttataggaagatgtaaaaacaattttcattgg 25195142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 8673481 - 8673445
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattgg 169  Q
    |||||||||| |||||| |||||||||||||||||||    
T  8673481 aagttttataagaagatgtaaaaacaattttcattgg 8673445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 5e-39; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 6686529 - 6686379
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaa-gttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnn 189  Q
    |||||||||||||||||||       |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||           
T  6686529 cataagaatttggagtatagttttttgtgttttctttggaaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg--aaaaa 6686432  T
Q  190 ntgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
     |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  6686431 atgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac 6686379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 91 - 242
Target Start/End: Original strand, 43589979 - 43590128
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       ||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||            
T  43589979 cataagaatttggagtatagttttttgtgttttcttttgaaaaagttttatagggagatgtaaaaacaattttcattggctattggttatgg--aaaaaa 43590076  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  43590077 tgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac 43590128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 95 - 241
Target Start/End: Original strand, 11261905 - 11262049
Alignment:
Q  95 agaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaa 194  Q
    |||||||||||||||       |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||        ||||    
T  11261905 agaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg--aaaaaatgaa 11262002  T
Q  195 agaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||    
T  11262003 agaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 11262049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 20644158 - 20644010
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||            
T  20644158 cataagaatttggagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg--aaaaaa 20644061  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| || ||| ||||||||||||||||||||||||| | ||||||||    
T  20644060 tgaaagagagggaaaattgaatgtaatttgcatttaatttcatgagaataa 20644010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 91 - 231
Target Start/End: Original strand, 37522606 - 37522744
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||            
T  37522606 cataagaatttggagtatagttttttgtgttttttttggaaaaagttttataggaagatgtaaaaacaattttcattggctattgtttatgg--aaaaaa 37522703  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaatttt 231  Q
    ||||||| |||||| ||||||||||||||||||||||||||    
T  37522704 tgaaagacagagaaaattgaatgtaatttgcatttaatttt 37522744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 42273791 - 42273645
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||            
T  42273791 cataagaatttggagtatagttttttgtgttttctttggaaaaagttttataagaagatgtaaaaacaattttcattggctattggttatgg--agaaaa 42273694  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||  |||||| |||||||| |||||||||||||||||| ||||||||    
T  42273693 tgaaag--agagaaaattgaatgcaatttgcatttaattttatgagaataa 42273645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 32111144 - 32110998
Alignment:
Q  93 taagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntg 192  Q
    |||||||||||||||||       |||||||||||| ||||||||| |||||||||| |||||||||||||||||| |||||||||||||        ||    
T  32111144 taagaatttggagtataatgttttgtgttttctttgaaaaaagtttcataggaagatgtaaaaacaattttcattgactattggttatgg--aaaatatg 32111047  T
Q  193 aaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||| |||||| ||| ||||||||||||||||||||||| ||||||||    
T  32111046 aaagagagagaaaattaaatgtaatttgcatttaattttatgagaataa 32110998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 91 - 241
Target Start/End: Original strand, 37562778 - 37562927
Alignment:
Q  91 cataagaatttggagtatannnnnnngtg-ttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnn 189  Q
    |||||||||||||||||||       ||| |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||           
T  37562778 cataagaatttggagtatagttttttgtgtttttttttggaaaaagttttataggaagatgtaaaaacaattttcattagctattgtttatgg--aaaaa 37562875  T
Q  190 ntgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
     ||||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  37562876 atgaaagacagagaaaattgaatgtaatttgcatttaattttatgagaataa 37562927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 34425474 - 34425327
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||| ||||||       |||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| ||||||            
T  34425474 cataagaatttgaagtatagttttttgtgttttctttgaaaaaagttttataggaatatgtaaaaacaattttcattggctattgattatgg---aaaaa 34425378  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    | ||||| |||||| ||||||| ||||||||||||||||||| ||||||||    
T  34425377 taaaagagagagaaaattgaatataatttgcatttaattttatgagaataa 34425327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 38130159 - 38130281
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||| |||||||||||||||||| || |||||| |||||||||||||||||||||||||        ||||||| |||||| |||||||||||    
T  38130159 gtgttttctttagaaaaagttttataggaatatgtaaaaataattttcattggctattggttatgg--aaaaaatgaaagagagagaaaattgaatgtaa 38130256  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    | | |||||||||||| ||||||||    
T  38130257 tctacatttaattttatgagaataa 38130281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 91 - 239
Target Start/End: Complemental strand, 20039246 - 20039100
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       |||||||||||| |||| ||||||||||||||| ||||| ||||||| |||||||||||||||||             
T  20039246 cataagaatttggagtataattttttgtgttttctttgaaaaaggttttataggaagatgtaaaaccaatttttattggctattggttatg--aaaaaaa 20039149  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaat 239  Q
    ||||||| | |||| ||| ||||||||||||||||||||||| ||||||    
T  20039148 tgaaagagatagaaaattaaatgtaatttgcatttaattttatgagaat 20039100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 121 - 241
Target Start/End: Complemental strand, 38280961 - 38280843
Alignment:
Q  121 tttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttg 220  Q
    |||||||| ||||||||||||||||| || ||||||||||||||||||| ||||| ||||||        ||||||| |||||| ||||||| |||||||    
T  38280961 tttctttgaaaaaagttttataggaaaatgtaaaaacaattttcattggttattgattatgg--aaaaaatgaaagagagagaaaattgaatataatttg 38280864  T
Q  221 catttaattttacgagaataa 241  Q
    |||||||||||| ||||||||    
T  38280863 catttaattttatgagaataa 38280843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 129 - 241
Target Start/End: Complemental strand, 32017809 - 32017700
Alignment:
Q  129 gaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttgcatttaat 228  Q
    ||||| ||||||||||||||| |||||||||||||||||| |||||||||||||         |||||| ||||||  ||||||||||||||||||||||    
T  32017809 gaaaacgttttataggaagatgtaaaaacaattttcattgtctattggttatggaaaaac---gaaagagagagaaagttgaatgtaatttgcatttaat 32017713  T
Q  229 tttacgagaataa 241  Q
    |||| ||||||||    
T  32017712 tttatgagaataa 32017700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 39505276 - 39505397
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||||||| ||||||||| | ||||| |||||||||||||||||||| ||| |||||||        | ||||| |||||| ||| |||||||    
T  39505276 gtgttttctttggaataagttttatggtaagatgtaaaaacaattttcattggcaattcgttatgg---aaaaataaaagagagagaaaattaaatgtaa 39505372  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||| | ||||||||    
T  39505373 tttgcatttaatttcatgagaataa 39505397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 241
Target Start/End: Complemental strand, 8225577 - 8225459
Alignment:
Q  120 ttttctttggaaaaagttttataggaagatat-aaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatt 218  Q
    ||||||||||||||||||||||||||| || | ||||| || ||||||||||||||||||||||        ||||||  |||||| |||||| ||||||    
T  8225577 ttttctttggaaaaagttttataggaaaatgtaaaaaaaaaatttcattggctattggttatgg--aaaaaatgaaag--agagaaaattgaacgtaatt 8225482  T
Q  219 tgcatttaattttacgagaataa 241  Q
    |||||||||||||| ||||||||    
T  8225481 tgcatttaattttatgagaataa 8225459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 117 - 240
Target Start/End: Complemental strand, 19413259 - 19413138
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    |||||||||||| || ||||||||| ||||||| |||||||||||||||||||| |||||||||||        | ||||| || ||| ||| |||||||    
T  19413259 gtgttttctttgaaataagttttatgggaagatgtaaaaacaattttcattggcaattggttatgg--aaaaaataaaagagagggaaaattaaatgtaa 19413162  T
Q  217 tttgcatttaattttacgagaata 240  Q
    |||||||||||||| | |||||||    
T  19413161 tttgcatttaatttcatgagaata 19413138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 5984151 - 5984280
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg-----nnnnnnnntgaaagaaagagaatattgaa 211  Q
    ||||||||||||||| ||||||||||| || || |||||||||||||||||| ||||||||||| |             ||||||| |||||||||| ||    
T  5984151 gtgttttctttggaataagttttatagaaatatgtaaaaacaattttcattgactattggttattggttatagagaaaatgaaagagagagaatatttaa 5984250  T
Q  212 tgtaatttgcatttaattttacgagaataa 241  Q
    |||||||| |||||||||||| ||||||||    
T  5984251 tgtaatttacatttaattttatgagaataa 5984280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 117 - 230
Target Start/End: Complemental strand, 4463478 - 4463367
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||||||| ||| || || ||||||| ||||||||||||||| ||||||||||||||||        ||||||| |||||| ||| |||||||    
T  4463478 gtgttttctttggaataagcttcatgggaagatgtaaaaacaattttcactggctattggttatgg--aaaaaatgaaagagagagaaaattaaatgtaa 4463381  T
Q  217 tttgcatttaattt 230  Q
    |||||| |||||||    
T  4463380 tttgcaattaattt 4463367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 25840982 - 25840860
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||||||| |||||| || ||||||| |||||||||||||||||| | |||| ||||||        | ||||| |||||| ||| |||||||    
T  25840982 gtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcattgacaattgtttatgg--aaaaaataaaagagagagaaaattaaatgtaa 25840885  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||| | ||||||||    
T  25840884 tttgcatttaatttcatgagaataa 25840860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 12912337 - 12912398
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggtt 178  Q
    ||||| |||||| || ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  12912337 gtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattggttattggtt 12912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 9957488 - 9957581
Alignment:
Q  143 ggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| |||||||||||||||||||||||||||||||         ||||||  ||||||  |||||||||||||||||||||||||| ||||||||    
T  9957488 ggaagatgtaaaaacaattttcattggctattggttatg---aaaaaatgaaag--agagaaagttgaatgtaatttgcatttaattttatgagaataa 9957581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 104260 - 104321
Alignment:
Q  120 ttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatg 181  Q
    |||| |||| |||||||||||||| ||||| ||||||||||||||||| |||||| ||||||    
T  104260 ttttttttgaaaaaagttttatagaaagatgtaaaaacaattttcattagctattagttatg 104321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 42104291 - 42104348
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctatt 174  Q
    ||||| ||||||||| |||||| || ||||||| ||||||||||||||||||||||||    
T  42104291 gtgttctctttggaacaagtttcatgggaagatgtaaaaacaattttcattggctatt 42104348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 3463858 - 3463910
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||| |||||| || ||||||||||||||||||||||||||||||| |||||    
T  3463858 gtgttatctttgaaataagttttataggaagatataaaaacaatttttattgg 3463910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 10153987 - 10154031
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattggt 177  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||    
T  10153987 aagttttataggaagatgtaaaaacaattttcattggttattggt 10154031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 241
Target Start/End: Complemental strand, 17351503 - 17351384
Alignment:
Q  120 ttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaattt 219  Q
    ||||| |||||| ||||||||| | ||||| ||||||||||||| ||||||||||| ||||||        ||| | | |||||| ||||||||||||||    
T  17351503 ttttcgttggaataagttttatggaaagatgtaaaaacaattttaattggctattgattatgg--agaaaatgacatagagagaaaattgaatgtaattt 17351406  T
Q  220 gcatttaattttacgagaataa 241  Q
     |||||||||| | ||||||||    
T  17351405 tcatttaatttcatgagaataa 17351384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 5369090 - 5369137
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    ||||||||||||||||| ||||||||||||||||||| | ||||||||    
T  5369090 aagttttataggaagatgtaaaaacaattttcattggttgttggttat 5369137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 8959758 - 8959707
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattg 168  Q
    ||||| |||||| || ||||||||||||||||| ||||||||||||||||||    
T  8959758 gtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattg 8959707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 241
Target Start/End: Original strand, 12730103 - 12730145
Alignment:
Q  199 agagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    |||||| ||||||||||||||||||||||||||| ||||||||    
T  12730103 agagaaaattgaatgtaatttgcatttaattttatgagaataa 12730145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 43454366 - 43454428
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggtta 179  Q
    ||||||||||||  | |||||||||||||| || |||||||||||||||||  ||||||||||    
T  43454366 gtgttttctttgtcataagttttataggaatatgtaaaaacaattttcatttactattggtta 43454428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 41625554 - 41625618
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatg 181  Q
    |||||||||||| || |||||| |||||||||| ||||||  ||||||||| ||||||| |||||    
T  41625554 gtgttttctttgaaataagtttcataggaagatgtaaaaattattttcattcgctattgattatg 41625618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 241
Target Start/End: Original strand, 12792931 - 12792966
Alignment:
Q  206 attgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||||||||||||||||||||||| ||||||||    
T  12792931 attgaatgtaatttgcatttaattttatgagaataa 12792966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 12729937 - 12729982
Alignment:
Q  136 ttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    |||||||||||||  |||| |||||||||||||||||||||||||||    
T  12729937 ttttataggaagag-taaagacaattttcattggctattggttatgg 12729982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 12792839 - 12792884
Alignment:
Q  136 ttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    |||||||||||||  |||| |||||||||||||||||||||||||||    
T  12792839 ttttataggaagag-taaagacaattttcattggctattggttatgg 12792884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 104345 - 104386
Alignment:
Q  199 agagaatattgaatgtaatttgcatttaattttacgagaata 240  Q
    |||||| |||||||||||| |||||||||||||| |||||||    
T  104345 agagaaaattgaatgtaatatgcatttaattttatgagaata 104386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 8506533 - 8506497
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  8506533 aagttttatagaaagatgtaaaaacaattttcattgg 8506497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 16153389 - 16153440
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||| |||||| || ||||||||||||||||| ||||||| |||||||||||    
T  16153389 gtgttatctttgaaataagttttataggaagatgtaaaaac-attttcattgg 16153440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 29307246 - 29307282
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  29307246 aagttttataggaagatgtaaaaataattttcattgg 29307282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 1e-36; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 91 - 239
Target Start/End: Complemental strand, 2126182 - 2126036
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||| ||||       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||            
T  2126182 cataagaatttggaatatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg--aaaaaa 2126085  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaat 239  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||||||    
T  2126084 tgaaagaaagagaaaattgaatgtaatttgcatttaatttaatgagaat 2126036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 35691537 - 35691387
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       |||||||||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||||||            
T  35691537 cataagaatttggagtataattttttgtgttttctttgaaaaaagttttatagggagatgtaaaaacaatttttattggctattggttatgg-aaaaaaa 35691439  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  35691438 tgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac 35691387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 91 - 241
Target Start/End: Original strand, 15959657 - 15959805
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||            
T  15959657 cataagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg--aaaaaa 15959754  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    | ||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  15959755 ttaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 15959805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 91 - 241
Target Start/End: Original strand, 39555603 - 39555751
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       |||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||            
T  39555603 cataagaatttggagtataggtttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaacaattttcattggctattggttatgg--aaaaaa 39555700  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  39555701 tgaaagagagagaacattgaatgtaatttgcatttaattttatgagaataa 39555751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 24190613 - 24190465
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       |||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||            
T  24190613 cataagaatttggagtatagttttttgtgttttctttggaaaaagttttatacggagatgtaaaaacaattttcattggctattggttatgg--aaaaaa 24190516  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
    |||||||||||||| ||| ||||||||||||||||||||||| |||||||||    
T  24190515 tgaaagaaagagaaaatt-aatgtaatttgcatttaattttatgagaataac 24190465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 91 - 241
Target Start/End: Original strand, 32624022 - 32624170
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||| ||       |||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||            
T  32624022 cataagaatttggagtgtagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggccattggttatgg--aaaaaa 32624119  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  32624120 tgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 32624170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 92 - 241
Target Start/End: Original strand, 12448985 - 12449132
Alignment:
Q  92 ataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnnt 191  Q
    ||||||||||||||||||       |||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||        |    
T  12448985 ataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggccattggttatgg--aaaaaat 12449082  T
Q  192 gaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
     ||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  12449083 caaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 12449132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 6785574 - 6785452
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||        ||||||| |||||| ||||||||||     
T  6785574 gtgttttcttttgaaaaagttttatatgaagatgtaaaaacaattttcattggctattggttatgg--aaaaaatgaaagagagagaaaattgaatgtag 6785477  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||||| ||||||||    
T  6785476 tttgcatttaattttatgagaataa 6785452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 42965859 - 42965979
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||        ||||||| |||||| |||||||||||    
T  42965859 gtgttttctttggaaaaa-ttttataggaagatgtaaaaacaattttcattggctattggttatgg---aaaaatgaaagagagagaaaattgaatgtaa 42965954  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    ||||||||||||||||  |||||||    
T  42965955 tttgcatttaattttataagaataa 42965979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 95 - 241
Target Start/End: Complemental strand, 6786978 - 6786834
Alignment:
Q  95 agaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaa 194  Q
    |||||||||||||||       |||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||        ||||    
T  6786978 agaatttggagtatagttttttgtgttttctttggaaaaagttttatatgaagatgtaaacacaattttcattggctattggttatgg--aaaaaatgaa 6786881  T
Q  195 agaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||| || ||| |||||||||| |||||||||||||||| ||||||||    
T  6786880 agagagtgaaaattgaatgtagtttgcatttaattttatgagaataa 6786834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 11241171 - 11241080
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  11241171 cataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaccaattttcattggctattggttatgg 11241080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 33369694 - 33369549
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    ||||| |||||||||||||       |||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||            
T  33369694 cataaaaatttggagtatagttttttgtgttttctttggaaaaagttttatatga-gatgtaaaaacaattttcattggctattggttatgg--aaaaaa 33369598  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||  |||||| ||||||||||||||||||||||||||| ||||||||    
T  33369597 tgaaag--agagaaaattgaatgtaatttgcatttaattttatgagaataa 33369549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 120 - 241
Target Start/End: Complemental strand, 45226253 - 45226134
Alignment:
Q  120 ttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaattt 219  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||||| |||||||||||||        ||||||| | |||| ||||||||||||||    
T  45226253 ttttctttgaaaaaagttttataggaagacgtaaaaacaattttcattgactattggttatgg--aaaaaatgaaagagatagaaaattgaatgtaattt 45226156  T
Q  220 gcatttaattttacgagaataa 241  Q
    ||||||||||||| ||||||||    
T  45226155 gcatttaattttatgagaataa 45226134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 40718796 - 40718674
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    |||||||||||| ||||||||||||| |||| | || |||||||||||||||||||||||| || |        |||||||||||||| |||||||||||    
T  40718796 gtgttttctttgaaaaaagttttatatgaagttgtagaaacaattttcattggctattggtaatagaaaaaa--tgaaagaaagagaaaattgaatgtaa 40718699  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||||| ||||||||    
T  40718698 tttgcatttaattttatgagaataa 40718674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 7468006 - 7468128
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    |||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||| ||| |         ||||||| | |||| |||||||||||    
T  7468006 gtgttttctttggaaaaagttttaaaggaagatgtaaatacaattttcattggctattgattaag--agaaaaatgaaagagatagaaaattgaatgtaa 7468103  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||||| ||||||||    
T  7468104 tttgcatttaattttatgagaataa 7468128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 43667346 - 43667466
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    |||||||||||| |||||||||||||||||||  |||||||||||||||||||| |||||||||||        ||||||  |||||| |||||||||||    
T  43667346 gtgttttctttgaaaaaagttttataggaagacgtaaaaacaattttcattggccattggttatgg--aaaaaatgaaag--agagaaaattgaatgtaa 43667441  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    ||| |||||||||||| ||||||||    
T  43667442 tttacatttaattttatgagaataa 43667466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 32983215 - 32983335
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||||||||||| |||||||||||        ||||||| |||||| ||||||| |||    
T  32983215 gtgttttctttggaaaa-gttttataagaagatgtaaaaacaattttcattggc-attggttatgg--aaaaaatgaaagagagagaaaattgaatataa 32983310  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||||| ||||||||    
T  32983311 tttgcatttaattttatgagaataa 32983335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 130 - 241
Target Start/End: Original strand, 47600095 - 47600204
Alignment:
Q  130 aaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttgcatttaatt 229  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||         ||||||| | |||| ||||||||||||||||||||||||    
T  47600095 aaaaagttttataggaagatgtaaaaacaattttcattggctattgtttatg--aaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatt 47600192  T
Q  230 ttacgagaataa 241  Q
    ||| ||||||||    
T  47600193 ttatgagaataa 47600204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 28016763 - 28016852
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    ||||||||||| |||||||       |||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  28016763 cataagaatttagagtatagtttttggtgttttctttgaaaaatgttttataggaagatgtaaaaacaattttcattggctattggttat 28016852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 91 - 241
Target Start/End: Original strand, 39932589 - 39932737
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       ||||||| |||  || |||||||||| |||||||||||||||||||| ||||||||||||| ||||            
T  39932589 cataagaatttggagtatagttttttgtgttttttttttaataagttttataagaagatataaaaacaatttttattggctattggtcatgg--agaaaa 39932686  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    | ||||| |||||| ||||||||||||||| ||||||||||| ||||||||    
T  39932687 taaaagagagagaaaattgaatgtaatttgtatttaattttatgagaataa 39932737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 47014534 - 47014655
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    |||||||| ||| ||||||||||||||||| || |||||||||||||||||| |||||||||||||        ||||||| |||||| ||||||||| |    
T  47014534 gtgttttcgttgaaaaaagttttataggaaaatgtaaaaacaattttcattgactattggttatgg--aaaaaatgaaagagagagaaaattgaatgt-a 47014630  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    ||| |||||||||||| ||||||||    
T  47014631 tttacatttaattttatgagaataa 47014655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 46818548 - 46818610
Alignment:
Q  120 ttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  46818548 ttttctttgaaaaaagttttataggaagatataaaaacaattttcattggctaatagttatgg 46818610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 241
Target Start/End: Original strand, 23392211 - 23392330
Alignment:
Q  119 gttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatt 218  Q
    ||||||||||||| ||||||||||| || ||||||||| ||||||||||| |||||||||||||        || ||||||||||| ||| |||||||||    
T  23392211 gttttctttggaataagttttatagaaaaatataaaaataattttcattgactattggttatgg--agaaaatggaagaaagagaaaatt-aatgtaatt 23392307  T
Q  219 tgcatttaattttacgagaataa 241  Q
    |||||||||||| | ||||||||    
T  23392308 tgcatttaatttcatgagaataa 23392330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 136 - 241
Target Start/End: Original strand, 28120817 - 28120920
Alignment:
Q  136 ttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttgcatttaattttacga 235  Q
    |||||| ||||||| ||||||||||||||||||||||||| ||||||        ||||||| |||||| ||||||||||||||||||||||||||| |     
T  28120817 ttttatgggaagatgtaaaaacaattttcattggctattgattatgg--aaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgt 28120914  T
Q  236 gaataa 241  Q
    ||||||    
T  28120915 gaataa 28120920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 2246057 - 2246179
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    |||||||||||| || |||||||||||||| || |||||| ||||||||||||||||| ||| |||        || |||| |||||| ||| |||||||    
T  2246057 gtgttttctttgaaataagttttataggaatatgtaaaaagaattttcattggctattcgttgtgg--ggaaagtggaagagagagaaaattaaatgtaa 2246154  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||||| ||||||||    
T  2246155 tttgcatttaattttatgagaataa 2246179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 5858430 - 5858477
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5858430 aagttttataggaagatataaaaacaattttcattggctattggttat 5858477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 24728670 - 24728792
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||| ||| |||||| || ||||||| |||||||||||||||||||| |||| ||||||        | ||||| |||||| ||| |||||||    
T  24728670 gtgttttctttcgaataagtttcatgggaagatgtaaaaacaattttcattggcaattgattatgg--aaaaaataaaagagagagaaaattaaatgtaa 24728767  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||| ||||||||||    
T  24728768 tttgcatttaatttcacgagaataa 24728792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 3875060 - 3875186
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggc----tattggttatggnnnnnnnntgaaagaaagagaatattgaat 212  Q
    ||||||| ||| |||||||||||||||||| || ||||||||||||| ||||||    ||||||||||||        ||||||| |||||| |||||||    
T  3875060 gtgtttttttttgaaaaagttttataggaatatgtaaaaacaatttttattggctatatattggttatgg--aaaaaatgaaagagagagaaaattgaat 3875157  T
Q  213 gtaatttgcatttaattttacgagaataa 241  Q
    | |||||||||||||||||| ||||||||    
T  3875158 gaaatttgcatttaattttatgagaataa 3875186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 134 - 241
Target Start/End: Original strand, 6787050 - 6787154
Alignment:
Q  134 agttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttgcatttaattttac 233  Q
    |||||||||||||||| |||||| |||||| ||||||||||||||||||        ||||||| |||||| |||||||||| |||||||||| ||||||    
T  6787050 agttttataggaagatgtaaaaataatttttattggctattggttatgg--aaaaaatgaaagagagagaa-attgaatgtagtttgcatttatttttac 6787146  T
Q  234 gagaataa 241  Q
    ||||||||    
T  6787147 gagaataa 6787154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 10558799 - 10558864
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    ||||||||||||||| || |||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  10558799 gtgttttctttggaataatttttatgggaagatgtaaaaacaattttcattggctattgattatgg 10558864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 44148879 - 44148944
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    ||||||||||||||| |||||| || ||||||| |||||||||||||||||||| |||||||||||    
T  44148879 gtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcattggcaattggttatgg 44148944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 125 - 241
Target Start/End: Complemental strand, 1820524 - 1820411
Alignment:
Q  125 tttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttgcatt 224  Q
    ||||||||||||||||||||||||| |||||| ||| |||||| ||| |||||||||         ||||||| ||| || |||||||||||||||||||    
T  1820524 tttggaaaaagttttataggaagatgtaaaaa-aatattcattagcttttggttatg--aaaaaaatgaaagagagaaaaaattgaatgtaatttgcatt 1820428  T
Q  225 taattttacgagaataa 241  Q
    |||||||| ||||||||    
T  1820427 taattttatgagaataa 1820411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 16854250 - 16854139
Alignment:
Q  125 tttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttgcatt 224  Q
    |||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||||||        ||||||| ||| || ||| |||||||||||||||    
T  16854250 tttgaaaaaagttttattggaaggtgtaaaaacaatttttattggctattggttatgg--agaaaatgaaagagagataaaattaaatgtaatttgcatt 16854153  T
Q  225 taattttacgagaa 238  Q
    |||||||| |||||    
T  16854152 taattttatgagaa 16854139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 3076413 - 3076291
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||| ||||||| ||||||||| ||||||| |||||| ||||||||||||| |||||||||||        | ||||  |||||| ||| |||||||    
T  3076413 gtgttttatttggaataagttttatgggaagatgtaaaaataattttcattggcaattggttatgg--aaaaaataaaagtgagagaaaattaaatgtaa 3076316  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||| | ||||||||    
T  3076315 tttgcatttaatttcatgagaataa 3076291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 91 - 175
Target Start/End: Complemental strand, 52985077 - 52984993
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattg 175  Q
    |||||||||||||||||||       ||||||||||||||| |||||| |  ||||||| |||||||||||||||||||||||||    
T  52985077 cataagaatttggagtatagttttttgtgttttctttggaataagtttcacgggaagatgtaaaaacaattttcattggctattg 52984993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 117 - 179
Target Start/End: Complemental strand, 1034975 - 1034913
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggtta 179  Q
    ||||||||||||||| |||||||||  ||||||||||||||||||||||| | ||||||||||    
T  1034975 gtgttttctttggaataagttttatgagaagatataaaaacaattttcatcgactattggtta 1034913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 46543126 - 46542980
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    ||||| |||||||||||||       |||||||||||| |||||  |||||||||||||  ||||||||||| ||||||||||||||| |||            
T  46543126 cataaaaatttggagtatagttttttgtgttttctttgaaaaaaaatttataggaagatgaaaaaacaatttccattggctattggttgtgg--agaaaa 46543029  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||  |||||| ||| |||| |||||||||||||||||| ||||||||    
T  46543028 tgaaag--agagaaaattaaatgcaatttgcatttaattttatgagaataa 46542980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 91 - 232
Target Start/End: Original strand, 13136571 - 13136707
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       |||||||||||  |||||   |||||||||||| |||||||||||| |||||||||||||||||||            
T  13136571 cataagaatttggagtatagttttttgtgttttcttt-aaaaaaaaattataggaagatgtaaaaacaatttccattggctattggttatgg--aaaaaa 13136667  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaatttta 232  Q
    ||||||  |||||| ||||||| |||||||||||||||||||    
T  13136668 tgaaag--agagaaaattgaatataatttgcatttaatttta 13136707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 43765412 - 43765348
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatg 181  Q
    ||||||||||| ||| ||||||||||||||||| |||||||| |||||||||| |||| ||||||    
T  43765412 gtgttttctttagaataagttttataggaagatgtaaaaacatttttcattggttatttgttatg 43765348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 50370071 - 50370015
Alignment:
Q  125 tttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatg 181  Q
    |||| |||||||||||||||||||| ||||||||||||  |||||||||||||||||    
T  50370071 tttgaaaaaagttttataggaagatgtaaaaacaatttctattggctattggttatg 50370015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 3861739 - 3861802
Alignment:
Q  118 tgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatg 181  Q
    |||||||||| ||| ||||||||| | ||||| ||||||||||||||||||||||||| |||||    
T  3861739 tgttttctttagaataagttttattgaaagatgtaaaaacaattttcattggctattgattatg 3861802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 33431677 - 33431614
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    ||||||| |||  |||||||||||||||| |||  |||||||||||||||||||||||||||||    
T  33431677 gtgtttttttttaaaaaagttttataggaggatggaaaaacaattttcattggctattggttat 33431614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 32318619 - 32318668
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||||||||||    
T  32318619 aagttttattggaagatgtaaaaacaattttcattggttattggttatgg 32318668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 37735429 - 37735537
Alignment:
Q  120 ttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaattt 219  Q
    |||||||||||| |||||| || ||||||  ||||||||||||| ||||||||||| ||||||        || || | |||||| ||||||||||||||    
T  37735429 ttttctttggaataagtttcatgggaagaagtaaaaacaatttttattggctattgattatgg--agaaaatggaaaagagagaaaattgaatgtaattt 37735526  T
Q  220 gcatttaattt 230  Q
    |||||||||||    
T  37735527 gcatttaattt 37735537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 5950541 - 5950494
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    ||||||||||||||||| |||||||||||||||||||  |||||||||    
T  5950541 aagttttataggaagatgtaaaaacaattttcattggtcattggttat 5950494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Complemental strand, 13351785 - 13351746
Alignment:
Q  130 aaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  13351785 aaaaagttttataggaagatgtaaaaacaattttcattgg 13351746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 16688238 - 16688191
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    ||||||||||||||||| ||||||||||||||||||| | ||||||||    
T  16688238 aagttttataggaagatgtaaaaacaattttcattggttgttggttat 16688191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 51840538 - 51840601
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    ||||| ||||||||| |||||| |||| ||||||||||| ||||||||||||| |||| |||||    
T  51840538 gtgttatctttggaataagtttcatagaaagatataaaatcaattttcattggttattagttat 51840601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 8889756 - 8889798
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattg 175  Q
    ||||||||||||||||| ||||||||||||||||||| |||||    
T  8889756 aagttttataggaagatgtaaaaacaattttcattggttattg 8889798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 30221843 - 30221778
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    |||||||||||  || ||||||||| ||||||| |||||||| |||| ||||| ||||||||||||    
T  30221843 gtgttttctttaaaataagttttatgggaagatgtaaaaacattttttattggatattggttatgg 30221778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 7397824 - 7397772
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||| |||||| || || |||||||||||||| |||||||||||||||||||    
T  7397824 gtgttatctttgaaataaattttataggaagatgtaaaaacaattttcattgg 7397772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 168
Target Start/End: Complemental strand, 15912300 - 15912265
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattg 168  Q
    ||||||||||||||||| ||||||||||||||||||    
T  15912300 aagttttataggaagatgtaaaaacaattttcattg 15912265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 241
Target Start/End: Complemental strand, 25391784 - 25391680
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttgcatttaatttta 232  Q
    |||||||||| ||| || |||||||||||||||||||||| | |||||||        || |||| | | || |||||||||||||||||||||||||||    
T  25391784 aagttttatatgaaaatgtaaaaacaattttcattggctaatagttatgg---agaagtggaagagata-aaaattgaatgtaatttgcatttaatttta 25391689  T
Q  233 cgagaataa 241  Q
     ||||||||    
T  25391688 tgagaataa 25391680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 32742219 - 32742295
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcatt 167  Q
    ||||||||||| |||||||       |||||||||||  |||||||||||||  || ||||||||||||||||||||    
T  32742219 cataagaattttgagtatagttttttgtgttttctttaaaaaaagttttataaaaaaatataaaaacaattttcatt 32742295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 37538911 - 37538864
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    ||||||||||||||||| |||| |||||||||||||| | ||||||||    
T  37538911 aagttttataggaagatgtaaagacaattttcattggttgttggttat 37538864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 199 - 241
Target Start/End: Original strand, 28016867 - 28016909
Alignment:
Q  199 agagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    |||||| ||||||||||| ||||||||||||||| ||||||||    
T  28016867 agagaaaattgaatgtaacttgcatttaattttatgagaataa 28016909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 25185347 - 25185399
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||| |||||| || ||||||||||||||||| | ||||||| |||||||||    
T  25185347 gtgttatctttgaaataagttttataggaagatgtgaaaacaactttcattgg 25185399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 30701428 - 30701480
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||| |||||| || ||||||||||||||||| | |||| ||||||||||||    
T  30701428 gtgttatctttgaaataagttttataggaagatgtgaaaataattttcattgg 30701480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 35366265 - 35366309
Alignment:
Q  136 ttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    |||||||| ||||| ||||||||||||| ||||| ||||||||||    
T  35366265 ttttatagaaagatgtaaaaacaattttaattggttattggttat 35366309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 47302949 - 47303012
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatg 181  Q
    ||||||| || |||| |||||| |||||||||| |||||  |||||||||||||||||| |||||    
T  47302949 gtgtttttttaggaataagtttcataggaagatgtaaaat-aattttcattggctattgattatg 47303012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 201 - 241
Target Start/End: Complemental strand, 50012627 - 50012587
Alignment:
Q  201 agaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    |||| |||||||||||||||||||||||||||  |||||||    
T  50012627 agaaaattgaatgtaatttgcatttaattttataagaataa 50012587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 50176640 - 50176588
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||| |||||| || || |||||||||||||| ||||||||||||| |||||    
T  50176640 gtgttatctttgaaataaattttataggaagatgtaaaaacaatttttattgg 50176588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 91 - 242
Target Start/End: Original strand, 590 - 739
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||            
T  590 cataagaatttggagtatagttttatgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattttcattggctattggttatgg--aaaaaa 687  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||    
T  688 tgaaagaaagataaaattgaatgtaatttgcatttaattttatgagaataac 739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 5e-36; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 35517267 - 35517118
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||            
T  35517267 cataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagtgagatgtaaaaataattttcattggctattggttatgg--aaaaaa 35517170  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataac 242  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  35517169 tgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac 35517118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 91 - 241
Target Start/End: Original strand, 28599164 - 28599312
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       ||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||            
T  28599164 cataagaatttggagtatagttttttgtgttttctttggaaaaagatttataggaagatgtaaaaataattttcattggctattggttatgg--aaaaaa 28599261  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    |||||||||||||| |||||||||||| |||||||||||||| ||||||||    
T  28599262 tgaaagaaagagaaaattgaatgtaatatgcatttaattttatgagaataa 28599312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 3201444 - 3201322
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||        ||||||||||| || |||||||||||    
T  3201444 gtgttttctttggaaaaagttttatagaaagatgtaaaaacaattttcattggctattggttatgg--aaaaaatgaaagaaagataaaattgaatgtaa 3201347  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||||| ||||||||    
T  3201346 tttgcatttaattttatgagaataa 3201322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 91 - 241
Target Start/End: Original strand, 6110215 - 6110365
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||            
T  6110215 cataagaatttggagtatagctttttgtgttttcttcggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatg 6110314  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
      | ||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  6110315 aaagagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 6110365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 19264244 - 19264095
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    ||||||||||| |||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||            
T  19264244 cataagaatttagagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg--aaaaaa 19264147  T
Q  191 tgaaagaaagagaatattgaatgtaa-tttgcatttaattttacgagaataa 241  Q
    | ||||| |||||| ||||||||||| |||||||||||||||| ||||||||    
T  19264146 ttaaagagagagaaaattgaatgtaattttgcatttaattttatgagaataa 19264095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 45085401 - 45085253
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    |||||||||||||||||||       || ||||||||| |||||||||||||||||||| ||||||||||||||||| || |||||||||||            
T  45085401 cataagaatttggagtatagttttttgtattttctttgaaaaaagttttataggaagatgtaaaaacaattttcattagccattggttatgg--aaaaaa 45085304  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  45085303 tgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 45085253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 45660483 - 45660361
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||        ||||||| ||| || ||| |||||||    
T  45660483 gtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatgg--agaaaatgaaagagagataaaattaaatgtaa 45660386  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||||| ||||||||    
T  45660385 tttgcatttaattttatgagaataa 45660361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 136 - 241
Target Start/End: Complemental strand, 41528355 - 41528252
Alignment:
Q  136 ttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaatttgcatttaattttacga 235  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||        |||||||||||||| ||||||||||||||||||||||||||| ||    
T  41528355 ttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaa--tgaaagaaagagaaaattgaatgtaatttgcatttaattttatga 41528258  T
Q  236 gaataa 241  Q
    ||||||    
T  41528257 gaataa 41528252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 28858427 - 28858305
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    |||||||||||| |||||||||||||| ||||| |||||| ||||||||||||||||||||||| |        ||||||| |||||| |||||||||||    
T  28858427 gtgttttctttgaaaaaagttttatagaaagatgtaaaaataattttcattggctattggttattg--taaaaatgaaagagagagaaaattgaatgtaa 28858330  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||||| ||||||||    
T  28858329 tttgcatttaattttatgagaataa 28858305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 11617168 - 11617079
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    |||||||||||||||||||       || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11617168 cataagaatttggagtatagtttttggtattttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 11617079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 33198673 - 33198795
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    |||||||||||  || ||||||||||||||||| ||||||||||||| ||||| ||||||||||||        ||||||| |||||| |||||||||||    
T  33198673 gtgttttctttaaaagaagttttataggaagatgtaaaaacaattttgattggttattggttatgg--agaaaatgaaagagagagaaaattgaatgtaa 33198770  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    ||||||||||||| || ||||||||    
T  33198771 tttgcatttaattctatgagaataa 33198795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 14874081 - 14874016
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    |||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  14874081 gtgttttctttgaaaaaagttttataggaagatgtaaaaataattttcattggctattggttatgg 14874016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 117 - 230
Target Start/End: Original strand, 40584440 - 40584551
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||| ||| ||||||||| ||||||| ||||||||||||||||||| | ||||||||||        ||||||| |||||| |||||||||||    
T  40584440 gtgttttctttagaataagttttatgggaagatgtaaaaacaattttcattggttgttggttatgg--gaaaaatgaaagagagagaaaattgaatgtaa 40584537  T
Q  217 tttgcatttaattt 230  Q
    ||||||||||||||    
T  40584538 tttgcatttaattt 40584551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 24204547 - 24204635
Alignment:
Q  93 taagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatg 181  Q
    |||||||||||||||||       ||||||||||||||| |||||||||||||| || ||||| |||||||||||||||||||||||||    
T  24204547 taagaatttggagtataatttattgtgttttctttggaataagttttataggaatatgtaaaatcaattttcattggctattggttatg 24204635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 25572163 - 25572042
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||||||| |||||| || ||||||| ||||||||||||||||||| ||||||||||||        || |||| |||||| ||| |||||||    
T  25572163 gtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcattggatattggttatgg---aaaaatggaagagagagaaaattaaatgtaa 25572067  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||| | ||||||||    
T  25572066 tttgcatttaatttcatgagaataa 25572042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 29524083 - 29524205
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||||||| |||||| || ||||||| |||||||||||||||||||| |||||||||||        | ||||| |||||| ||| |||||||    
T  29524083 gtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcattggcaattggttatgg--aaaaaataaaagagagagaaaattaaatgtaa 29524180  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||| | ||||||||    
T  29524181 tttgcatttaatttcatgagaataa 29524205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 8701719 - 8701655
Alignment:
Q  118 tgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    |||||||||||||| |||||| || ||||||| ||||||||||||||||||||||||||||||||    
T  8701719 tgttttctttggaataagtttcatgggaagatgtaaaaacaattttcattggctattggttatgg 8701655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 241
Target Start/End: Original strand, 6765976 - 6766098
Alignment:
Q  118 tgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaat 217  Q
    ||||||| |||||| || |||||||||||||| ||||||||||||| |||| |||||||||||||        || |||| |||||| ||||||||||||    
T  6765976 tgttttcattggaataaattttataggaagatgtaaaaacaatttttattgactattggttatgg-aaaaaaatggaagagagagaaaattgaatgtaat 6766074  T
Q  218 ttgcatttaattttacgagaataa 241  Q
    || |||||||||| | ||||||||    
T  6766075 ttacatttaatttaatgagaataa 6766098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 12938386 - 12938295
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    |||||||||||||||||||       ||| |||||||| || ||||||||||||||  | ||||||||||||||||||||||||| ||||||    
T  12938386 cataagaatttggagtatagttttttgtgctttctttgaaataagttttataggaaagtgtaaaaacaattttcattggctattgattatgg 12938295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 33677585 - 33677536
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  33677585 aagttttataggaagatgtaaaaacaattttcattgactattggttatgg 33677536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 32273789 - 32273737
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||| |||||| || |||||||||||||||||||||||||||||||||||||    
T  32273789 gtgttatctttgaaataagttttataggaagatataaaaacaattttcattgg 32273737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 43415519 - 43415468
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattg 168  Q
    |||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  43415519 gtgttttctttaaaaaaagttttataggaagatgtaaaaacaattttcattg 43415468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 9864761 - 9864826
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    ||||||||||||||| |||||| || ||||||  |||||||||||||||||||| |||| ||||||    
T  9864761 gtgttttctttggaataagtttcatgggaagaggtaaaaacaattttcattggcaattgattatgg 9864826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 117 - 228
Target Start/End: Complemental strand, 5963318 - 5963210
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||| ||| ||||||||| ||| ||| |||||| |||||| |||||||||||||||||         || |||| |||||| |||||||||||    
T  5963318 gtgttttctttagaataagttttatggga-gatgtaaaaataatttttattggctattggttatg--aagaaaatggaagagagagaaaattgaatgtaa 5963222  T
Q  217 tttgcatttaat 228  Q
    ||||||||||||    
T  5963221 tttgcatttaat 5963210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 40808762 - 40808823
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggtta 179  Q
    ||||||||||||||| |||||| || ||||||| ||||||||||||||||| || ||||||||    
T  40808762 gtgttttctttggaataagtttcat-ggaagatgtaaaaacaattttcattagcaattggtta 40808823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 16494974 - 16495019
Alignment:
Q  123 tctttggaaaaagttttataggaagatataaaaacaattttcattg 168  Q
    |||||| || ||||||||||||||||| ||||||||||||||||||    
T  16494974 tctttgaaataagttttataggaagatgtaaaaacaattttcattg 16495019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 91 - 173
Target Start/End: Complemental strand, 35023042 - 35022961
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctat 173  Q
    |||||||||||||||||||       ||||||| ||||||  |||||| |||||||||| ||||||||||||||||| |||||    
T  35023042 cataagaatttggagtataattttttgtgtttt-tttggagtaagtttcataggaagatgtaaaaacaattttcatttgctat 35022961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 35115862 - 35115911
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    ||||||||||| ||||| ||||||||||||||||| | ||||||||||||    
T  35115862 aagttttatagaaagatgtaaaaacaattttcatttgttattggttatgg 35115911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 4891681 - 4891733
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||| |||||| || ||||||||||||||||| ||||||||||||| |||||    
T  4891681 gtgttatctttgaaataagttttataggaagatgtaaaaacaatttttattgg 4891733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 26998419 - 26998383
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||||||||||||||| |||||||||||||||||||    
T  26998419 aagttttataggaagatgtaaaaacaattttcattgg 26998383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 32010220 - 32010168
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||| |||||| || ||||||||||||||||| |||||| ||||||||||||    
T  32010220 gtgttatctttgaaataagttttataggaagatgtaaaaataattttcattgg 32010168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 38071113 - 38071061
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||| |||||| || |||||||| |||||||| |||||||||||||||||||    
T  38071113 gtgttatctttgaaataagttttacaggaagatgtaaaaacaattttcattgg 38071061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 7645243 - 7645326
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctatt 174  Q
    |||||||||||||||||||       |||||||| || ||| || ||| || |||| || ||||||||||||||||||||||||    
T  7645243 cataagaatttggagtataatattttgtgttttccttagaataaatttcatgggaacatgtaaaaacaattttcattggctatt 7645326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 199 - 241
Target Start/End: Original strand, 7645352 - 7645394
Alignment:
Q  199 agagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    |||||| ||||||||||||||||||||||||| | ||||||||    
T  7645352 agagaaaattgaatgtaatttgcatttaatttcatgagaataa 7645394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 11030988 - 11031030
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattggctattg 175  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||    
T  11030988 aagttttatagaaagatataaaaacaatttttattggttattg 11031030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 30421296 - 30421346
Alignment:
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    |||||||||||||| ||| |||||||||| ||||||||||||  |||||||    
T  30421296 tgaaagaaagagaaaattaaatgtaatttacatttaattttataagaataa 30421346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 8032726 - 8032762
Alignment:
Q  133 aagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  8032726 aagttttataggaagatgtaaaaacaatttttattgg 8032762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 230
Target Start/End: Original strand, 39696916 - 39696952
Alignment:
Q  194 aagaaagagaatattgaatgtaatttgcatttaattt 230  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  39696916 aagaaagagaaaattaaatgtaatttgcatttaattt 39696952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 3447 - 3593
Alignment:
Q  93 taagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntg 192  Q
    |||||||||||||||||       ||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||        ||    
T  3447 taagaatttggagtatagttttttgtgttttcttttgaaaaagttttataggaagatgtaaaaataattttcattggctattggttatgg--aaaaaatg 3544  T
Q  193 aaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||| |||||| |||||||||||||||||||||||| || ||||||||    
T  3545 aaagagagagaaaattgaatgtaatttgcatttaattgtatgagaataa 3593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 91 - 241
Target Start/End: Original strand, 44788 - 44936
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    ||||| |||||||||||||       |||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||            
T  44788 cataataatttggagtatatttttttgtgttttctttggaaaaagttttataggaatattaaaaaacaattttcattggctattggttatgg--aaaaaa 44885  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    ||||||| || ||| ||| ||||||||||||||||||||||||||||||||    
T  44886 tgaaagagagggaaaattaaatgtaatttgcatttaattttacgagaataa 44936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 10163 - 10041
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||        ||||||| |||||| |||||||||||    
T  10163 gtgttttctttagaaaaagttttataggaagatgtaaaaacaattttcattgactattggttatgg--aaaaaatgaaagagagagaaaattgaatgtaa 10066  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    ||||||||||||| || ||||||||    
T  10065 tttgcatttaattgtatgagaataa 10041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 78101 - 77953
Alignment:
Q  91 cataagaatttggagtatannnnnnngtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnn 190  Q
    ||||||||||| |||||||       |||||||||||| |||||||| ||||||||||| |||||||||||||||||||| |||||||||||            
T  78101 cataagaatttagagtatagttttttgtgttttctttgaaaaaagttgtataggaagatgtaaaaacaattttcattggccattggttatgg--aaaaaa 78004  T
Q  191 tgaaagaaagagaatattgaatgtaatttgcatttaattttacgagaataa 241  Q
    |||||||||| ||| |||||||||||||| |||||||||||| ||||||||    
T  78003 tgaaagaaagtgaaaattgaatgtaatttacatttaattttatgagaataa 77953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 120 - 241
Target Start/End: Complemental strand, 154976 - 154857
Alignment:
Q  120 ttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaattt 219  Q
    ||||||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||        ||||||| |||||| ||| ||||||||||    
T  154976 ttttctttgaaaaaagttttatagaaagatgtaaaaacaatttacattggctattggttatgg--aaaaaatgaaagatagagaaaatttaatgtaattt 154879  T
Q  220 gcatttaattttacgagaataa 241  Q
    ||||||||||||| ||||||||    
T  154878 gcatttaattttatgagaataa 154857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 963 - 900
Alignment:
Q  119 gttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatgg 182  Q
    ||||||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  963 gttttctttggaataagttttatagaaagatataaaaataattttcattgactattggttatgg 900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 157912 - 157790
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||||||| |||||| || || |||| |||||||||||||||||||| |||||||||||        | ||||| |||||| ||| |||||||    
T  157912 gtgttttctttggaataagtttcatggggagatgtaaaaacaattttcattggcaattggttatgg--aaaaaataaaagagagagaaaattaaatgtaa 157815  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    |||||||||||||| | ||||||||    
T  157814 tttgcatttaatttcatgagaataa 157790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 40297 - 40234
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttat 180  Q
    ||||||||||||||| || |||||||| ||| | ||||||||||||||||||||||||||||||    
T  40297 gtgttttctttggaataaattttatagaaagttgtaaaaacaattttcattggctattggttat 40234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 1130 - 1008
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||| |||  |||||||||||||| ||||| |||||||| |||||||||  ||||||||||||        |||||||  ||||| ||| |||||||    
T  1130 gtgtttttttttaaaaaagttttatagaaagatgtaaaaacagttttcattgagtattggttatgg--aaaaaatgaaagagggagaaaattcaatgtaa 1033  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    ||||| |||||||||| ||||||||    
T  1032 tttgcgtttaattttatgagaataa 1008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 9090 - 8968
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||| |||  |||||||||||||| ||||| |||||||| |||||||||  ||||||||||||        |||||||  ||||| ||| |||||||    
T  9090 gtgtttttttttaaaaaagttttatagaaagatgtaaaaacagttttcattgagtattggttatgg--aaaaaatgaaagagggagaaaattcaatgtaa 8993  T
Q  217 tttgcatttaattttacgagaataa 241  Q
    ||||| |||||||||| ||||||||    
T  8992 tttgcgtttaattttatgagaataa 8968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 230
Target Start/End: Complemental strand, 160368 - 160257
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattggctattggttatggnnnnnnnntgaaagaaagagaatattgaatgtaa 216  Q
    ||||||||||||||| ||  || || ||||||| ||||| || |||||||||||||||||||||||        || ||||||||||| |||||||||||    
T  160368 gtgttttctttggaataaaattcatgggaagatgtaaaaccagttttcattggctattggttatgg--gaaaaatggaagaaagagaaaattgaatgtaa 160271  T
Q  217 tttgcatttaattt 230  Q
    |||  |||||||||    
T  160270 tttatatttaattt 160257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 3286 - 3234
Alignment:
Q  117 gtgttttctttggaaaaagttttataggaagatataaaaacaattttcattgg 169  Q
    ||||| |||||| || ||||||||||||||||| |||||||||||| ||||||    
T  3286 gtgttatctttgaaataagttttataggaagatctaaaaacaatttccattgg 3234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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