View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2498_low_72 (Length: 227)
Name: NF2498_low_72
Description: NF2498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2498_low_72 |
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Alignment Details
Target: chr8 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 13 - 207
Target Start/End: Complemental strand, 13272085 - 13271884
Alignment:
| Q |
13 |
gagatgaaggtatatttaaaataaaagaagtaaataattgaccaagaaaaaacattagacggctaaccaatgaaacttaattccgacacaacttgtcaat |
112 |
Q |
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| T |
13272085 |
gagatgaagatatatttaaaacaagaggagtagataattgaccaaggaaagacattagacggatagccaatgaaacttaattccgacacaacttgttaat |
13271986 |
T |
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| Q |
113 |
tcatagtttccccaacttgaatta------taccaataaaaactaccaaccatatgttcataaccataaacaaacaatcaaaataac-ttgagtggtgat |
205 |
Q |
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| T |
13271985 |
tcatagtttcaccaacttgtatgataccattaccaataaaaactaccaaccatatgttcataaccataaacaaacaatcaaaataactttgagtggtgat |
13271886 |
T |
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| Q |
206 |
cg |
207 |
Q |
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|| |
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| T |
13271885 |
cg |
13271884 |
T |
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