View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2498_low_9 (Length: 550)

Name: NF2498_low_9
Description: NF2498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2498_low_9
NF2498_low_9
[»] chr5 (18 HSPs)
chr5 (17-550)||(38986873-38987407)
chr5 (166-540)||(39725745-39726119)
chr5 (152-540)||(39879125-39879521)
chr5 (358-550)||(40417805-40417997)
chr5 (152-458)||(40411830-40412144)
chr5 (152-296)||(1164332-1164476)
chr5 (449-550)||(1164090-1164191)
chr5 (449-550)||(1849575-1849676)
chr5 (185-357)||(1849323-1849495)
chr5 (444-550)||(3299099-3299205)
chr5 (444-550)||(3391992-3392098)
chr5 (186-290)||(3298832-3298936)
chr5 (186-287)||(3391725-3391826)
chr5 (455-540)||(39399520-39399605)
chr5 (442-516)||(40596238-40596312)
chr5 (449-540)||(39168516-39168607)
chr5 (209-272)||(39168281-39168340)
chr5 (63-116)||(39874044-39874097)
[»] chr4 (1 HSPs)
chr4 (167-550)||(25912671-25913058)
[»] chr3 (1 HSPs)
chr3 (162-206)||(55345733-55345777)


Alignment Details
Target: chr5 (Bit Score: 499; Significance: 0; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 499; E-Value: 0
Query Start/End: Original strand, 17 - 550
Target Start/End: Original strand, 38986873 - 38987407
Alignment:
Q  17 cataggagtggaaaagtaaatctcaaaaaataaataaagagtatgatgggccaaacccgcaattagaaccgaaaattttggccctaaaccataaataaat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| || |||||||||||||||||||||||||||    
T  38986873 cataggagtggaaaagtaaatctcaaaaaataaataaagagtaagatgggccaaacccgcgattagaactgagaattttggccctaaaccataaataaat 38986972  T
Q  117 aaatagatagaataaaaagtgagtt-cggcaattgctgcaattgcaaagaaattaggtcaaaaagtggagaagatggagcaagggtggcgttctgttgtg 215  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38986973 aaatagatagaataaaaagtgagtttcggcaattgctgcaattgcaaagaaattaggtcaaaaagtggagaagatggagcaagggtggcgttctgttgtg 38987072  T
Q  216 aaagttcgtcaacaacatgtttctcaacttcgtactgtctttcatttggagcagatcagcgttatgaccaatcttggtatccttgatgatgttgagaaaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38987073 aaagttcgtcaacaacatgtttctcaacttcgtactgtctttcatttggagcagatcagcgttatgaccaatcttggtatccttgatgatgttgagaaaa 38987172  T
Q  316 tcatatacgacgttgatcaaggtttttctttctgtttcaatataacatcttgtgcttggtattttgcgacacttataggggacatagttcctgtcaagtc 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38987173 tcatatacgacgttgatcaaggtttttctttctgtttcaatataatatcttgtgcttggtattttgcgacacttataggggacatagttcctgtcaagtc 38987272  T
Q  416 taattgggctatgattattcctagaactgaaagataccttttttctgttgaaatcgtccctatttgctgcggggatttgatctttctgcctcctaacgtt 515  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  38987273 taattgggctatgattattcctagaactgaaagataccttttttctgttgaaatcgtccccatttgctgcggggatttgatctttctgcctcctaatgtt 38987372  T
Q  516 gttgcttctttgggtccaaatattggtcctattgt 550  Q
    |||||||||||||||||||||||||||||||||||    
T  38987373 gttgcttctttgggtccaaatattggtcctattgt 38987407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 166 - 540
Target Start/End: Original strand, 39725745 - 39726119
Alignment:
Q  166 aattaggtcaaaaagtggagaagatggagcaagggtggcgttctgttgtgaaagttcgtcaacaacatgtttctcaacttcgtactgtctttcatttgga 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39725745 aattaggtcaaaaagtggagaagatggagcaagggtggcgttctgttgtgaaagttcgtcaacaacatgtttctcaacttcgtactgtctttcatttgga 39725844  T
Q  266 gcagatcagcgttatgaccaatcttggtatccttgatgatgttgagaaaatcatatacgacgttgatcaaggtttttctttctgtttcaatataacatct 365  Q
    |||||||||||||||||||||||||| |||| |||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39725845 gcagatcagcgttatgaccaatcttgctatcgttgatcgtgttgagagaatcatatacgacgttgatcaaggtttttctttctgtttcaatataacatct 39725944  T
Q  366 tgtgcttggtattttgcgacacttataggggacatagttcctgtcaagtctaattgggctatgattattcctagaactgaaagataccttttttctgttg 465  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  39725945 tgtgcttggcattttgcgagacttataggggaaatagttcctgtcaagtctgcttgggctatgattattcctagaactgaaagataccttttttctgttg 39726044  T
Q  466 aaatcgtccctatttgctgcggggatttgatctttctgcctcctaacgttgttgcttctttgggtccaaatattg 540  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39726045 aaatcgtccccatttgctgcggggatttgatctttctgcctcctaacgttgttgcttctttgggtccaaatattg 39726119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 152 - 540
Target Start/End: Original strand, 39879125 - 39879521
Alignment:
Q  152 tgcaattgcaaagaaattaggtcaaaaagtggagaagatggagcaagggtgg---cgttctgttgt---gaaagttcgtcaacaacatgtttctcaactt 245  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||   |||||||||||   ||| ||||||||||||||||||| ||| ||     
T  39879125 tgcaattgcaaagaaattaggtcaaagagtggagaagatggaggaagggtggtggcgttctgttgttgtgaatgttcgtcaacaacatgtttgtcagctg 39879224  T
Q  246 cgtactgtctttcatttggagcagatcagcgttatgaccaatcttggtatccttgatgatgttgagaaaatcatatacgacgttgatcaaggtttttctt 345  Q
    |||||| |||||||||||||||||||||||||| ||| |||| |||||| | ||  | | | | ||| ||||| ||||||| ||||| ||||||||||||    
T  39879225 cgtactttctttcatttggagcagatcagcgttttgaacaattttggtaccgttcgtaaagctaagagaatcaaatacgacattgatgaaggtttttctt 39879324  T
Q  346 tctgtttcaatataacatcttgtgcttggtattttgcgacacttataggggacatagttcc--tgtcaagtctaattgggctatgattattcctagaact 443  Q
    ||||||||  | ||||||||| ||||||| |||||| |  |||||| | | | ||| ||||  |||||||| | |||||| ||||||| |||||  || |    
T  39879325 tctgtttccgtttaacatcttatgcttgggattttgtggaacttattgagaaaatacttcctgtgtcaagtttgattgggatatgattcttcctgaaagt 39879424  T
Q  444 gaaagataccttttttctgttgaaatcgtccctatttgctgcggggatttgatctttctgcctcctaacgttgttgcttctttgggtccaaatattg 540  Q
    |||| ||||||||||  |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39879425 gaaatatacctttttcgtgttaaaatcgtccccatttgctgcggggatttgatctttctgcctcctaacgttgttgcttctttgggtccaaatattg 39879521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 358 - 550
Target Start/End: Original strand, 40417805 - 40417997
Alignment:
Q  358 taacatcttgtgcttggtattttgcgacacttataggggacatagttcctgtcaagtctaattgggctatgattattcctagaactgaaagatacctttt 457  Q
    ||||||||| ||||||| |||||| || |||||||||||| ||| ||||||||| || | |||||| |||||||  ||||  || |||||||||||||||    
T  40417805 taacatcttttgcttggcattttgtgaaacttataggggaaatacttcctgtcaggtttgattgggatatgattcctcctgaaagtgaaagatacctttt 40417904  T
Q  458 ttctgttgaaatcgtccctatttgctgcggggatttgatctttctgcctcctaacgttgttgcttctttgggtccaaatattggtcctattgt 550  Q
    |  ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||  ||||||||||||||||||    
T  40417905 tcgtgttgaaatcgtccccatttgctgcggggatttgatctttctgcctcctaatgttgttgcttctttcggtgaaaatattggtcctattgt 40417997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 152 - 458
Target Start/End: Original strand, 40411830 - 40412144
Alignment:
Q  152 tgcaattgcaaagaaattaggtcaaaaagtggagaagatggagcaagggtgg---cgttctgttgt---gaaagttcgtcaacaacatgtttctcaactt 245  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||   |||||||||||   ||| ||||||||||||||||||| ||| ||     
T  40411830 tgcaattgcaaagaaattaggtcaaagagtggagaagatggaggaagggtggtggcgttctgttgttgtgaatgttcgtcaacaacatgtttgtcagctg 40411929  T
Q  246 cgtactgtctttcatttggagcagatcagcgttatgaccaatcttggtatccttgatgatgttgagaaaatcatatacgacgttgatcaaggtttttctt 345  Q
    |||||| |||||||||||||||||||||||||| ||| |||| |||||| | ||  | | | | ||| ||||| ||||||| ||||| ||||||||||||    
T  40411930 cgtactttctttcatttggagcagatcagcgttttgaacaattttggtaccgttcgtaaagctaagataatcaaatacgacattgatgaaggtttttctt 40412029  T
Q  346 tctgtttcaatataacatcttgtgcttggtattttgcgacacttataggggacatagttcc--tgtcaagtctaattgggctatgattattcctagaact 443  Q
    ||||||||  | ||||||||| ||||||| |||||| |  |||||| | | | ||| ||||  |||||||| | |||||| ||||||| |||||  || |    
T  40412030 tctgtttccgtttaacatcttatgcttgggattttgtggaacttattgagaaaatacttcctgtgtcaagtttgattgggatatgattcttcctgaaagt 40412129  T
Q  444 gaaagataccttttt 458  Q
    |||| ||||||||||    
T  40412130 gaaatataccttttt 40412144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 152 - 296
Target Start/End: Complemental strand, 1164476 - 1164332
Alignment:
Q  152 tgcaattgcaaagaaattaggtcaaaaagtggagaagatggagcaagggtggcgttctgttgtgaaagttcgtcaacaacatgtttctcaacttcgtact 251  Q
    |||||||| ||| ||||||||||| ||||||  |||||||||| |||| |||||| |||||||||| ||||||||||||||||||||| |||| ||||||    
T  1164476 tgcaattggaaaaaaattaggtcagaaagtgtcgaagatggaggaaggatggcgtgctgttgtgaatgttcgtcaacaacatgtttctgaactgcgtact 1164377  T
Q  252 gtctttcatttggagcagatcagcgttatgaccaatcttggtatc 296  Q
     | ||||||||||||||| ||||||||  || | |||||||||||    
T  1164376 ttgtttcatttggagcaggtcagcgtttggaaccatcttggtatc 1164332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 449 - 550
Target Start/End: Complemental strand, 1164191 - 1164090
Alignment:
Q  449 ataccttttttctgttgaaatcgtccctatttgctgcggggatttgatctttctgcctcctaacgttgttgcttctttgggtccaaatattggtcctatt 548  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||  |||  ||| ||||||||| |||||||||||||||||||||    
T  1164191 ataccttttttctgttgaaatcgtcccaatttgctgcggggatttgattattctgcctagtaatattgctgcttctttaggtccaaatattggtcctatt 1164092  T
Q  549 gt 550  Q
    ||    
T  1164091 gt 1164090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 449 - 550
Target Start/End: Original strand, 1849575 - 1849676
Alignment:
Q  449 ataccttttttctgttgaaatcgtccctatttgctgcggggatttgatctttctgcctcctaacgttgttgcttctttgggtccaaatattggtcctatt 548  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||  |||  ||| ||||||||| |||||||||||||||||||||    
T  1849575 ataccttttttctgttgaaatcgtcccaatttgctgcggggatttgattattctgcctagtaatattgctgcttctttaggtccaaatattggtcctatt 1849674  T
Q  549 gt 550  Q
    ||    
T  1849675 gt 1849676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 185 - 357
Target Start/End: Original strand, 1849323 - 1849495
Alignment:
Q  185 gaagatggagcaagggtggcgttctgttgtgaaagttcgtcaacaacatgtttctcaacttcgtactgtctttcatttggagcagatcagcgttatgacc 284  Q
    |||||||||| ||||||   || |||||||||| ||||||||||||||||||||| |||| |||||| | ||||||||||||||| ||||||||  || |    
T  1849323 gaagatggaggaagggttttgtgctgttgtgaatgttcgtcaacaacatgtttctgaactgcgtactttgtttcatttggagcaggtcagcgtttcgaac 1849422  T
Q  285 aatcttggtatccttgatgatgttgagaaaatcatatacgacgttgatcaaggtttttctttctgtttcaata 357  Q
     |||| |||||||||||  |  ||  || ||||| |||| || | ||| ||||||| ||||||||||||||||    
T  1849423 catctcggtatccttgaaaagattcggagaatcaaatacaacatcgatgaaggtttgtctttctgtttcaata 1849495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 444 - 550
Target Start/End: Original strand, 3299099 - 3299205
Alignment:
Q  444 gaaagataccttttttctgttgaaatcgtccctatttgctgcggggatttgatctttctgcctcctaacgttgttgcttctttgggtccaaatattggtc 543  Q
    ||||||| | |||||||||||||||||||||| ||||| ||||||||||||||  ||||||||  | |  ||| ||||||||| ||||||||||||||||    
T  3299099 gaaagatgcattttttctgttgaaatcgtcccaatttgttgcggggatttgattattctgcctagtcatattgctgcttctttcggtccaaatattggtc 3299198  T
Q  544 ctattgt 550  Q
    |||||||    
T  3299199 ctattgt 3299205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 444 - 550
Target Start/End: Original strand, 3391992 - 3392098
Alignment:
Q  444 gaaagataccttttttctgttgaaatcgtccctatttgctgcggggatttgatctttctgcctcctaacgttgttgcttctttgggtccaaatattggtc 543  Q
    ||||||| | |||||||||||||||||||||| ||||| ||||||||||||||  ||||||||  | |  ||| ||||||||| ||||||||||||||||    
T  3391992 gaaagatgcattttttctgttgaaatcgtcccaatttgttgcggggatttgattattctgcctagtcatattgctgcttctttcggtccaaatattggtc 3392091  T
Q  544 ctattgt 550  Q
    |||||||    
T  3392092 ctattgt 3392098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 186 - 290
Target Start/End: Original strand, 3298832 - 3298936
Alignment:
Q  186 aagatggagcaagggtggcgttctgttgtgaaagttcgtcaacaacatgtttctcaacttcgtactgtctttcatttggagcagatcagcgttatgacca 285  Q
    ||||||||| ||||||||  |  |||| |||| ||||||||||||||||||| |||||| |||||| | ||||||||||||||||||||||||  |||||    
T  3298832 aagatggaggaagggtgggttggtgttttgaatgttcgtcaacaacatgtttgtcaactacgtactttgtttcatttggagcagatcagcgtttggacca 3298931  T
Q  286 atctt 290  Q
    |||||    
T  3298932 atctt 3298936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 287
Target Start/End: Original strand, 3391725 - 3391826
Alignment:
Q  186 aagatggagcaagggtggcgttctgttgtgaaagttcgtcaacaacatgtttctcaacttcgtactgtctttcatttggagcagatcagcgttatgacca 285  Q
    ||||||||| ||||||||  |  |||| |||| ||||||||||||||||||| |||||| |||||| | ||||||||||||||||||||||||  |||||    
T  3391725 aagatggaggaagggtgggttggtgttttgaatgttcgtcaacaacatgtttgtcaactacgtactttgtttcatttggagcagatcagcgtttggacca 3391824  T
Q  286 at 287  Q
    ||    
T  3391825 at 3391826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 455 - 540
Target Start/End: Original strand, 39399520 - 39399605
Alignment:
Q  455 tttttctgttgaaatcgtccctatttgctgcggggatttgatctttctgcctcctaacgttgttgcttctttgggtccaaatattg 540  Q
    ||||| ||||||||||||||| |||||||||||||||||||| |||||||||||| | |||| |||||| || ||| |||||||||    
T  39399520 tttttttgttgaaatcgtccccatttgctgcggggatttgatttttctgcctcctgatgttgctgcttcgttcggtgcaaatattg 39399605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 442 - 516
Target Start/End: Original strand, 40596238 - 40596312
Alignment:
Q  442 ctgaaagataccttttttctgttgaaatcgtccctatttgctgcggggatttgatctttctgcctcctaacgttg 516  Q
    |||| ||||||  ||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||| ||||    
T  40596238 ctgatagatacactttttctgttgaaatcgtccccatttgctacggggatttgatttttctgcctcctaaggttg 40596312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 449 - 540
Target Start/End: Original strand, 39168516 - 39168607
Alignment:
Q  449 ataccttttttctgttgaaatcgtccctatttgctgcggggatttgatctttctgcctcctaacgttgttgcttctttgggtccaaatattg 540  Q
    ||||| ||||| ||||||||||||||| |||| |||||| |||||||| |||||||| |||||  ||| |||| || | ||| |||||||||    
T  39168516 ataccatttttttgttgaaatcgtcccaattttctgcggagatttgatttttctgccccctaatattgctgctactctcggtgcaaatattg 39168607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 272
Target Start/End: Original strand, 39168281 - 39168340
Alignment:
Q  209 tgttgtgaaagttcgtcaacaacatgtttctcaacttcgtactgtctttcatttggagcagatc 272  Q
    ||||||||| ||||||||||||||||||||||| |    |||| ||||||||||||||||||||    
T  39168281 tgttgtgaaggttcgtcaacaacatgtttctcatc----tactttctttcatttggagcagatc 39168340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 39874044 - 39874097
Alignment:
Q  63 tgggccaaacccgcaattagaaccgaaaattttggccctaaaccataaataaat 116  Q
    |||||||||||||| |||||||| ||||||| ||||||||||| | ||||||||    
T  39874044 tgggccaaacccgcgattagaactgaaaattctggccctaaacaacaaataaat 39874097  T

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Target: chr4 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 167 - 550
Target Start/End: Complemental strand, 25913058 - 25912671
Alignment:
Q  167 attaggtcaaaaagtggagaagatggagcaagggtggcgttctgttgtgaaagttc--gtcaacaacatgtttctcaacttcgtactgtctttcatttgg 264  Q
    ||||||||||||| || ||||||||||| |||||||||| ||||||||||| ||||  ||||||||||||||| |||||| |||||| ||||||||||||    
T  25913058 attaggtcaaaaaatgaagaagatggaggaagggtggcgctctgttgtgaatgttctcgtcaacaacatgtttgtcaactgcgtactttctttcatttgg 25912959  T
Q  265 agcagatcagcgttatgaccaatcttggt--atccttgatgatgttgagaaaa---tcatatacgacgttgatcaaggtttttctttctgtttcaatata 359  Q
    ||||||||||||||| ||   || ||  |  | | ||  | ||| | ||| ||   ||| ||||||| ||||| |||||||||| |||||||||  || |    
T  25912958 agcagatcagcgttacgagacattttaatacaccgttcgtaatgctaagagaatattcaaatacgacattgatgaaggtttttccttctgtttccgtaga 25912859  T
Q  360 acatcttgtgcttggtattttgcgacacttataggggacatagttcctgtcaagtctaattgggctatgattattcctagaactgaaagatacct---tt 456  Q
    ||||||| ||| ||| |||||| || |||||||||||||||||||||||||| || | |||||| |||||||  ||      |||||| ||| ||   ||    
T  25912858 acatcttttgcatggcattttgtgaaacttataggggacatagttcctgtcaggtttcattgggatatgattcctc------ctgaaatatatctttctt 25912765  T
Q  457 tttctgttgaaatcgtccctatttgctgcggggatttgatctttctgcctcctaacgttgttgcttctttgggtccaaatattggtcctattgt 550  Q
    ||| ||||||||||||||| |||| |||| |||||||||| |||||||||||||| |||| |||||||||  ||  ||||||||||||||||||    
T  25912764 tttttgttgaaatcgtccccattttctgctgggatttgatttttctgcctcctaatgttgctgcttctttcagtgtaaatattggtcctattgt 25912671  T

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Target: chr3 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 55345777 - 55345733
Alignment:
Q  162 aagaaattaggtcaaaaagtggagaagatggagcaagggtggcgt 206  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||    
T  55345777 aagaaattaggtcaaagagtggagaatatggaggaagggtggcgt 55345733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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