View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2499_high_35 (Length: 221)
Name: NF2499_high_35
Description: NF2499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2499_high_35 |
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Alignment Details
Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 31612718 - 31612530
Alignment:
| Q |
13 |
gagatgaaggggaggacaaagaggaggaatacaagggagggaattgaggaggctatgtatagttcgcgccatcttgggaagatgtttgctatgcctgaga |
112 |
Q |
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| T |
31612718 |
gagatgaaggggaggacaaagaggaggaatacaagggagggaattgaggaggctatgtatagttcgcgccatcttgggaagatgtttgctatgcctgaga |
31612619 |
T |
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| Q |
113 |
ggactgcgatgcctgttgagaagaagtagaaggtagacatgcctgcggcaccacgcattgtggggcctacgggctctgtggcaagtacg |
201 |
Q |
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| T |
31612618 |
ggactgcgatgcctgttgagaagaagtagaaggtagacatgcctgcggcaccacgcattgtggggcctacgggctctgtggcaagtacg |
31612530 |
T |
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