View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2499_high_7 (Length: 468)

Name: NF2499_high_7
Description: NF2499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2499_high_7
NF2499_high_7
[»] chr4 (64 HSPs)
chr4 (10-454)||(3296255-3296699)
chr4 (299-454)||(3296879-3297033)
chr4 (299-455)||(7118098-7118253)
chr4 (299-454)||(51906421-51906575)
chr4 (299-455)||(30608567-30608722)
chr4 (299-451)||(41510069-41510220)
chr4 (299-454)||(51906754-51906908)
chr4 (299-453)||(48553897-48554050)
chr4 (299-454)||(29691526-29691680)
chr4 (298-451)||(34129238-34129390)
chr4 (302-454)||(56106396-56106547)
chr4 (309-454)||(26168004-26168147)
chr4 (299-455)||(35166801-35166955)
chr4 (314-454)||(30952936-30953075)
chr4 (295-410)||(26168370-26168487)
chr4 (300-452)||(35469000-35469151)
chr4 (302-454)||(5544788-5544939)
chr4 (299-392)||(38759705-38759798)
chr4 (297-454)||(1791483-1791640)
chr4 (300-454)||(29691847-29692000)
chr4 (298-446)||(1791148-1791295)
chr4 (309-392)||(26984155-26984238)
chr4 (319-454)||(30608266-30608400)
chr4 (299-454)||(48760050-48760204)
chr4 (299-455)||(34294453-34294601)
chr4 (319-445)||(34129015-34129140)
chr4 (299-392)||(54142326-54142419)
chr4 (299-392)||(54143497-54143590)
chr4 (299-393)||(48759813-48759905)
chr4 (299-388)||(17288373-17288462)
chr4 (309-409)||(52398691-52398791)
chr4 (29-166)||(3288261-3288402)
chr4 (310-454)||(25916971-25917116)
chr4 (299-387)||(54168824-54168912)
chr4 (333-444)||(30047961-30048071)
chr4 (333-444)||(30062302-30062412)
chr4 (300-387)||(55347563-55347649)
chr4 (300-374)||(3296719-3296793)
chr4 (299-345)||(19310788-19310834)
chr4 (299-392)||(12922643-12922735)
chr4 (299-378)||(10580041-10580120)
chr4 (300-398)||(12107708-12107805)
chr4 (300-374)||(48554071-48554145)
chr4 (299-392)||(2669434-2669526)
chr4 (299-392)||(40841463-40841555)
chr4 (299-392)||(43979985-43980077)
chr4 (299-388)||(49426352-49426441)
chr4 (299-387)||(28957312-28957399)
chr4 (299-387)||(28957743-28957830)
chr4 (299-387)||(31227880-31227967)
chr4 (299-378)||(29691749-29691828)
chr4 (299-345)||(1791322-1791368)
chr4 (299-337)||(32192442-32192480)
chr4 (298-388)||(49424454-49424544)
chr4 (299-392)||(789896-789988)
chr4 (340-393)||(12108284-12108337)
chr4 (299-376)||(17287488-17287565)
chr4 (299-376)||(46262636-46262712)
chr4 (299-387)||(28505210-28505297)
chr4 (334-374)||(35166708-35166748)
chr4 (299-387)||(38026108-38026195)
chr4 (339-387)||(40841894-40841942)
chr4 (299-387)||(54167495-54167583)
chr4 (339-387)||(55347970-55348018)
[»] chr2 (43 HSPs)
chr2 (299-454)||(21217256-21217410)
chr2 (299-454)||(21264992-21265146)
chr2 (299-454)||(2517414-2517568)
chr2 (299-454)||(21216924-21217078)
chr2 (299-454)||(21265324-21265478)
chr2 (299-454)||(2191218-2191372)
chr2 (299-454)||(21182308-21182462)
chr2 (299-454)||(3691324-3691478)
chr2 (299-455)||(21267302-21267457)
chr2 (299-453)||(24093157-24093310)
chr2 (299-454)||(32114167-32114320)
chr2 (301-455)||(7083525-7083678)
chr2 (313-455)||(10706585-10706724)
chr2 (299-450)||(32114410-32114560)
chr2 (300-454)||(24093491-24093644)
chr2 (308-451)||(3691093-3691235)
chr2 (349-455)||(2606590-2606695)
chr2 (309-451)||(39729544-39729685)
chr2 (299-454)||(32860815-32860968)
chr2 (299-387)||(23222864-23222952)
chr2 (299-392)||(2035609-2035702)
chr2 (299-378)||(18107435-18107514)
chr2 (300-374)||(2191392-2191466)
chr2 (334-411)||(3624891-3624967)
chr2 (299-392)||(3854494-3854586)
chr2 (299-387)||(1804233-1804320)
chr2 (299-387)||(1804664-1804751)
chr2 (299-387)||(6476088-6476175)
chr2 (299-387)||(6476519-6476606)
chr2 (299-387)||(10709476-10709564)
chr2 (299-387)||(11451188-11451275)
chr2 (299-387)||(27377650-27377737)
chr2 (299-387)||(39947087-39947175)
chr2 (299-393)||(2036598-2036692)
chr2 (295-365)||(30311194-30311264)
chr2 (299-376)||(10708024-10708101)
chr2 (299-392)||(12090122-12090214)
chr2 (335-376)||(18105753-18105794)
chr2 (299-368)||(39600773-39600842)
chr2 (299-387)||(11450757-11450844)
chr2 (299-387)||(27378081-27378168)
chr2 (299-387)||(39096958-39097045)
chr2 (299-379)||(39945843-39945923)
[»] chr8 (40 HSPs)
chr8 (299-454)||(6297463-6297617)
chr8 (299-454)||(9800040-9800194)
chr8 (299-454)||(13315203-13315357)
chr8 (310-454)||(16662180-16662323)
chr8 (299-454)||(17915442-17915595)
chr8 (299-454)||(26997804-26997958)
chr8 (299-451)||(6297973-6298124)
chr8 (299-454)||(21006057-21006211)
chr8 (299-411)||(17914198-17914310)
chr8 (301-454)||(26243330-26243482)
chr8 (299-445)||(10047480-10047624)
chr8 (301-454)||(16662407-16662558)
chr8 (298-445)||(9800287-9800433)
chr8 (300-406)||(26720323-26720429)
chr8 (303-455)||(44024230-44024381)
chr8 (299-406)||(7344838-7344945)
chr8 (298-454)||(44148577-44148732)
chr8 (335-454)||(12489265-12489383)
chr8 (309-451)||(6297800-6297941)
chr8 (299-411)||(40304685-40304797)
chr8 (299-455)||(12489468-12489615)
chr8 (351-453)||(39234889-39234990)
chr8 (299-410)||(44803541-44803652)
chr8 (300-453)||(10047814-10047966)
chr8 (315-387)||(36155288-36155360)
chr8 (299-389)||(44802183-44802272)
chr8 (299-454)||(11089229-11089383)
chr8 (299-387)||(20682709-20682797)
chr8 (299-378)||(4694442-4694521)
chr8 (299-378)||(21005959-21006038)
chr8 (299-378)||(44024399-44024478)
chr8 (416-454)||(17914962-17915000)
chr8 (299-387)||(4624534-4624622)
chr8 (310-376)||(45369134-45369200)
chr8 (299-392)||(12734174-12734266)
chr8 (298-387)||(20682925-20683014)
chr8 (299-392)||(29917106-29917198)
chr8 (299-392)||(29917534-29917626)
chr8 (295-387)||(16682528-16682620)
chr8 (340-388)||(22601540-22601588)
[»] chr7 (42 HSPs)
chr7 (299-454)||(17075220-17075374)
chr7 (299-454)||(17075552-17075706)
chr7 (299-454)||(18152757-18152911)
chr7 (299-454)||(32092229-32092383)
chr7 (293-454)||(5029689-5029848)
chr7 (309-454)||(22948813-22948957)
chr7 (300-453)||(11974666-11974818)
chr7 (306-412)||(42750094-42750200)
chr7 (298-447)||(44803574-44803722)
chr7 (299-454)||(28838356-28838507)
chr7 (299-454)||(20543912-20544066)
chr7 (299-406)||(28854678-28854785)
chr7 (299-451)||(10466717-10466868)
chr7 (299-451)||(23548945-23549096)
chr7 (299-436)||(28852694-28852830)
chr7 (300-454)||(20544246-20544398)
chr7 (300-376)||(30938597-30938673)
chr7 (361-452)||(23548670-23548760)
chr7 (299-409)||(32092508-32092618)
chr7 (300-409)||(11975042-11975150)
chr7 (303-391)||(6621113-6621200)
chr7 (299-411)||(12933038-12933150)
chr7 (303-454)||(49053815-49053966)
chr7 (309-392)||(12908392-12908475)
chr7 (299-387)||(27310048-27310136)
chr7 (316-376)||(27311060-27311120)
chr7 (299-387)||(30939565-30939653)
chr7 (298-380)||(11992714-11992796)
chr7 (299-392)||(16755629-16755721)
chr7 (299-363)||(23548055-23548119)
chr7 (354-454)||(44803382-44803481)
chr7 (299-378)||(18443619-18443697)
chr7 (299-387)||(4152721-4152809)
chr7 (330-444)||(49053514-49053625)
chr7 (299-377)||(28838526-28838604)
chr7 (299-392)||(1244439-1244531)
chr7 (299-392)||(28898030-28898122)
chr7 (299-392)||(41298672-41298764)
chr7 (299-387)||(22954047-22954134)
chr7 (415-454)||(6621022-6621061)
chr7 (299-376)||(29783936-29784012)
chr7 (299-387)||(18443177-18443264)
[»] chr1 (36 HSPs)
chr1 (299-454)||(3591272-3591426)
chr1 (299-455)||(9880724-9880879)
chr1 (309-453)||(47541529-47541672)
chr1 (298-455)||(48155213-48155369)
chr1 (299-451)||(19895401-19895552)
chr1 (299-451)||(50359377-50359528)
chr1 (299-454)||(5683162-5683316)
chr1 (288-454)||(4288375-4288535)
chr1 (299-451)||(18180216-18180367)
chr1 (300-454)||(6751049-6751202)
chr1 (299-455)||(9880485-9880640)
chr1 (299-451)||(31436321-31436472)
chr1 (299-450)||(50359126-50359275)
chr1 (299-455)||(6751287-6751443)
chr1 (299-454)||(18179880-18180034)
chr1 (300-406)||(19976166-19976272)
chr1 (299-444)||(5172746-5172890)
chr1 (299-454)||(5683496-5683650)
chr1 (285-454)||(48154961-48155128)
chr1 (299-387)||(1500982-1501070)
chr1 (299-387)||(45664688-45664776)
chr1 (335-454)||(19895735-19895853)
chr1 (299-451)||(42723193-42723348)
chr1 (361-446)||(47541767-47541851)
chr1 (299-387)||(36793575-36793663)
chr1 (299-387)||(40124508-40124595)
chr1 (299-378)||(12869664-12869743)
chr1 (299-389)||(37717795-37717884)
chr1 (299-392)||(17968038-17968130)
chr1 (299-392)||(47410850-47410942)
chr1 (299-387)||(32266484-32266571)
chr1 (299-387)||(32266915-32267002)
chr1 (299-378)||(3591174-3591253)
chr1 (299-378)||(45230571-45230649)
chr1 (299-392)||(30428101-30428193)
chr1 (342-387)||(46802754-46802799)
[»] chr3 (48 HSPs)
chr3 (299-454)||(43933441-43933595)
chr3 (299-455)||(13637714-13637869)
chr3 (287-454)||(9217810-9217975)
chr3 (299-444)||(22814297-22814441)
chr3 (311-454)||(44504105-44504247)
chr3 (299-444)||(9218459-9218602)
chr3 (299-452)||(26741241-26741389)
chr3 (299-434)||(37172431-37172565)
chr3 (299-406)||(44504368-44504475)
chr3 (300-454)||(38485699-38485851)
chr3 (303-444)||(25770326-25770466)
chr3 (301-453)||(37172084-37172235)
chr3 (302-441)||(50732229-50732367)
chr3 (302-441)||(50780488-50780626)
chr3 (299-409)||(51471336-51471446)
chr3 (299-454)||(34743408-34743559)
chr3 (299-454)||(27013414-27013564)
chr3 (299-385)||(132062-132148)
chr3 (299-408)||(43933708-43933816)
chr3 (295-454)||(25770656-25770809)
chr3 (300-411)||(33225490-33225601)
chr3 (334-392)||(51755910-51755968)
chr3 (299-388)||(48868587-48868676)
chr3 (299-370)||(45728335-45728406)
chr3 (300-454)||(13637478-13637630)
chr3 (299-388)||(48867651-48867740)
chr3 (299-411)||(33226899-33227011)
chr3 (300-388)||(51507919-51508007)
chr3 (299-388)||(3799723-3799812)
chr3 (296-373)||(27013580-27013657)
chr3 (299-378)||(4199896-4199974)
chr3 (299-374)||(51505956-51506031)
chr3 (299-392)||(22407270-22407362)
chr3 (299-372)||(22814597-22814670)
chr3 (299-392)||(34949757-34949849)
chr3 (299-392)||(36899255-36899347)
chr3 (299-392)||(45539636-45539728)
chr3 (299-387)||(46690114-46690201)
chr3 (340-387)||(2389064-2389111)
chr3 (299-378)||(25770495-25770574)
chr3 (299-378)||(27475391-27475469)
chr3 (299-392)||(42606281-42606373)
chr3 (299-388)||(47343725-47343814)
chr3 (334-411)||(54588493-54588570)
chr3 (299-387)||(7248490-7248578)
chr3 (299-375)||(37172255-37172331)
chr3 (339-387)||(45539249-45539297)
chr3 (300-376)||(51588477-51588552)
[»] scaffold0009 (2 HSPs)
scaffold0009 (300-454)||(108057-108210)
scaffold0009 (299-454)||(107723-107877)
[»] chr5 (52 HSPs)
chr5 (299-446)||(31588289-31588436)
chr5 (315-454)||(18339090-18339228)
chr5 (298-455)||(87195-87351)
chr5 (303-454)||(3935629-3935779)
chr5 (299-455)||(8647999-8648154)
chr5 (299-454)||(18999575-18999729)
chr5 (293-427)||(8750322-8750455)
chr5 (298-445)||(16284274-16284420)
chr5 (299-444)||(31176508-31176652)
chr5 (300-454)||(13987284-13987438)
chr5 (299-451)||(3406798-3406948)
chr5 (299-454)||(30415419-30415572)
chr5 (299-409)||(18999367-18999477)
chr5 (299-455)||(35373455-35373604)
chr5 (299-455)||(8750011-8750168)
chr5 (298-451)||(1650005-1650159)
chr5 (299-397)||(18340641-18340739)
chr5 (299-454)||(15978390-15978543)
chr5 (299-384)||(22231164-22231249)
chr5 (355-454)||(3935447-3935543)
chr5 (299-453)||(3406460-3406613)
chr5 (350-452)||(35383292-35383393)
chr5 (299-387)||(4187837-4187925)
chr5 (299-386)||(87020-87107)
chr5 (298-376)||(37813375-37813453)
chr5 (299-374)||(18339314-18339389)
chr5 (347-454)||(38834714-38834819)
chr5 (299-389)||(20892544-20892633)
chr5 (299-387)||(119959-120047)
chr5 (299-387)||(39402213-39402300)
chr5 (299-378)||(119185-119264)
chr5 (299-378)||(3879214-3879292)
chr5 (364-451)||(29751724-29751809)
chr5 (364-451)||(29752390-29752475)
chr5 (299-365)||(31932817-31932883)
chr5 (299-392)||(31093423-31093515)
chr5 (299-387)||(119011-119099)
chr5 (299-387)||(3191799-3191886)
chr5 (299-387)||(5747193-5747280)
chr5 (299-387)||(6543416-6543503)
chr5 (299-387)||(14626090-14626178)
chr5 (299-387)||(19353070-19353158)
chr5 (299-387)||(21949401-21949488)
chr5 (299-387)||(28641162-28641249)
chr5 (304-378)||(119794-119868)
chr5 (300-346)||(31588209-31588255)
chr5 (295-356)||(35294846-35294907)
chr5 (299-387)||(5746762-5746849)
chr5 (299-387)||(6543847-6543933)
chr5 (339-387)||(21949832-21949880)
chr5 (299-387)||(28641593-28641680)
chr5 (299-387)||(31162853-31162940)
[»] chr6 (26 HSPs)
chr6 (298-454)||(17157546-17157701)
chr6 (311-455)||(21113042-21113185)
chr6 (299-444)||(5974012-5974156)
chr6 (298-453)||(7645918-7646072)
chr6 (299-454)||(8710276-8710429)
chr6 (299-387)||(211442-211530)
chr6 (297-454)||(14712938-14713097)
chr6 (299-407)||(4510189-4510298)
chr6 (299-402)||(211706-211810)
chr6 (299-444)||(25932084-25932224)
chr6 (299-406)||(1869452-1869559)
chr6 (300-454)||(25932320-25932476)
chr6 (299-365)||(17157856-17157922)
chr6 (310-454)||(14712670-14712812)
chr6 (298-377)||(5975832-5975910)
chr6 (299-378)||(14712831-14712910)
chr6 (299-393)||(19579197-19579291)
chr6 (299-397)||(19595640-19595738)
chr6 (299-392)||(34984541-34984632)
chr6 (335-411)||(20522133-20522209)
chr6 (298-392)||(6162684-6162777)
chr6 (299-392)||(14257148-14257240)
chr6 (299-392)||(33107357-33107449)
chr6 (299-387)||(20824596-20824683)
chr6 (299-358)||(211581-211640)
chr6 (300-374)||(17157787-17157861)
[»] scaffold0063 (2 HSPs)
scaffold0063 (295-392)||(35188-35285)
scaffold0063 (300-454)||(34794-34947)
[»] scaffold0933 (1 HSPs)
scaffold0933 (299-443)||(492-635)
[»] scaffold0085 (1 HSPs)
scaffold0085 (299-387)||(39853-39940)
[»] scaffold0177 (1 HSPs)
scaffold0177 (299-388)||(25842-25931)


Alignment Details
Target: chr4 (Bit Score: 352; Significance: 0; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 10 - 454
Target Start/End: Original strand, 3296255 - 3296699
Alignment:
Q  10 aagaatatgaaaagcaaaaaagattggataatccagaaatatttaaaattccttttgaagtcagcaattcaaatttctattatttgttttttcttaaaga 109  Q
    ||||| || ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3296255 aagaaaataaaaaggaaaaaagattggataatccagaaatatttaaaactccttttgaagtcagcaattcaaatttctattatatgttttttcttaaaga 3296354  T
Q  110 ttcttaatgagtgtaataccacttagtcatgggtcatggcttagttgtcaagttactttggagaaacacacaccgtgtctaaacagtggccatactacta 209  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3296355 ttcttaatgactgtaatacaacttagtcatgggtcatggcttagttgtcaagttactttggagaaacacacaccgtgtctaaacagtggccatactacta 3296454  T
Q  210 tcataaattttttgagacggccaaatataaaagnnnnnnntacgttaataaatttcttagaataatttgtatttatgtaaaatataaaagttaaatatat 309  Q
     ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |    
T  3296455 gcataaattttttgagacggccaaatataaaagaaaaaaatacgttaataaatttcttagaataatttgtatttacgtaaaatataagagttaaatatgt 3296554  T
Q  310 ttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtc 409  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  3296555 ttttagtccttacattttgcgcccctttgaagaatattccctacatttcattaaatgtttttaaaatcctcacattttatctccgttatcaaaattagtc 3296654  T
Q  410 ccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||||||||||||||||||||||||  ||| |||||||||||||    
T  3296655 ccctgatgttaattctttaacggaatattgacgtggcagttagtg 3296699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 299 - 454
Target Start/End: Complemental strand, 3297033 - 3296879
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| ||||||||||||||||||||| ||||||||||||  |||     
T  3297033 gttaaatatatttttagtccttacattttgcgaccctttgaagaatagtccctacgtttcattaaatgtttttaaaatccttacattttatctccgttat 3296934  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| ||||||| ||||| || |||| |||||||||||||||||||||||    
T  3296933 caaaattagt-ccctgatattaatcctctaacagaatgctgatgtggcagttagtg 3296879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 299 - 455
Target Start/End: Complemental strand, 7118253 - 7118098
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||| |||| |||||||||| ||||     
T  7118253 gttaaatatgtttttagtccttacattttgcgcccctttgaagaatagtccatacatttcattaaatgtttttaaaattctcaaattttatctccattat 7118154  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtga 455  Q
    |||||||||| || || |||||||||| || | ||||||| ||||||||||||||||    
T  7118153 caaaattagt-ccatgctgttaattctctatcagaatgctaatgtggcagttagtga 7118098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 51906421 - 51906575
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||||| ||||||| ||| ||||||||||||||| ||||||||||||||||||  |||     
T  51906421 gttaaatatgtttttagtctttacattttgcgcctctttgaagaatagtccctacgtttcattaaatgtttttaatatcctcacattttatctccgttat 51906520  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| |||||||||||| |||||||||||||  ||||||| |||||||||    
T  51906521 caaaattagt-ccctgatgttaactctttaacggaatattgatgtgacagttagtg 51906575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 299 - 455
Target Start/End: Complemental strand, 30608722 - 30608567
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||| |||||||||||| ||| |||||||||||| || ||| |||| ||||||||||||||||||||||||||||||||||  |||     
T  30608722 gttaaatatgtttttagaccttacattttgtgcctctttgaagaatagtctctatatttcattaaatgtttttaaaatcctcacattttatctccgttat 30608623  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtga 455  Q
    |||||||||| | ||| |||||||| ||||||||||||||| |||||||||||||||    
T  30608622 caaaattagt-cactgttgttaattatttaacggaatgctgctgtggcagttagtga 30608567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 299 - 451
Target Start/End: Original strand, 41510069 - 41510220
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||| ||||||||||  |||     
T  41510069 gttaaatatatttttaatccttacattttgcgcccctttgaagaatagtccctacattttattaaatatttctaaaatcctcatattttatctcccttat 41510168  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagtta 451  Q
    |||||||||| | ||| |||||||||| ||||| ||||||||| || ||||||    
T  41510169 caaaattagt-cactgttgttaattctctaacgaaatgctgatatgacagtta 41510220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 299 - 454
Target Start/End: Complemental strand, 51906908 - 51906754
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||  |||     
T  51906908 gttaaatatgtttttagtccttacattttgcgctcctttgaagaatagtccctacatctcattaaatgtttttaaaatcctcacattttatctccgttat 51906809  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||||||||   ||| |||||||||| |||||||||| |||||||  ||||||||    
T  51906808 caaaattagt-ttctgctgttaattctctaacggaatgttgatgtgagagttagtg 51906754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 299 - 453
Target Start/End: Original strand, 48553897 - 48554050
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||| ||| ||||||| ||||||  ||||||||||||||||||||||||||  |||     
T  48553897 gttaaatacgtttttagtccttacattttgcgtccctttgaagaatagtccatacatttcattaaacctttttaaaatcctcacattttatctccgttat 48553996  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagt 453  Q
    |||||||||| |  || ||||||||||||||||||||||||||||| ||||||||    
T  48553997 caaaattagt-cattgttgttaattctttaacggaatgctgatgtgacagttagt 48554050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 29691526 - 29691680
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||||||| |||||||  || ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||  |||     
T  29691526 gttaaatatgtttttagtccttatattttgcatccatttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatctccgttat 29691625  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| | ||  |||||||||| ||| |||||| ||||||| |||||||||    
T  29691626 caaaattagt-ctctactgttaattctctaatggaatgttgatgtgacagttagtg 29691680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 298 - 451
Target Start/End: Complemental strand, 34129390 - 34129238
Alignment:
Q  298 agttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctatta 397  Q
    |||||||||| |||| || ||||||||||||| ||  ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||| |||    
T  34129390 agttaaatatgttttcagcccttacattttgcaccaatttgaagaatagtccctacatttcattaaatatttttaaaatcctcacattttatctctgtta 34129291  T
Q  398 acaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagtta 451  Q
     |||||||||| ||  | ||||||||||  ||||||||||||||||| ||||||    
T  34129290 tcaaaattagt-ccaagctgttaattctccaacggaatgctgatgtgacagtta 34129238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 302 - 454
Target Start/End: Complemental strand, 56106547 - 56106396
Alignment:
Q  302 aaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaa 401  Q
    |||||| ||||||||| |||||||||| |||||||||||||||| | |||| ||||||||||||||||||||||||||| |||||||||||  |||  ||    
T  56106547 aaatatgtttttagtctttacattttgtgcccctttgaagaatagttcctatattttattaaatgtttttaaaatcctctcattttatctccgttattaa 56106448  T
Q  402 aattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||||| |||||||||||||||| ||||  |||| ||||||| || ||||||    
T  56106447 aattagt-ccctgatgttaattctctaacataatgttgatgtgacaattagtg 56106396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 309 - 454
Target Start/End: Original strand, 26168004 - 26168147
Alignment:
Q  309 tttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagt 408  Q
    ||||||||| ||||||||||||||| ||| ||||||| |  |||||||| ||||||| ||||||||||||||||||||||||||  ||| ||||||||||    
T  26168004 tttttagtcattacattttgcgcccttttaaagaatagtttctacattt-attaaatatttttaaaatcctcacattttatctccgttatcaaaattagt 26168102  T
Q  409 cccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
     | ||| |||||||||| |||||||||||||||||| |||||||||    
T  26168103 -ctctgctgttaattctctaacggaatgctgatgtgacagttagtg 26168147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 299 - 455
Target Start/End: Complemental strand, 35166955 - 35166801
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| | |||||| ||||||||||||| ||||| ||| |||| ||||  ||||| ||||||||||||||||||||||||||||||||||  |||     
T  35166955 gttaaatatgtctttagtgcttacattttgcgtcccttcgaaaaataatcccagcatttcattaaatgtttttaaaatcctcacattttatctccgttat 35166856  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtga 455  Q
    |||||||||| | ||| |||||||||| |||||||| ||||||||| ||||||||||    
T  35166855 caaaattagt-ctctgctgttaattctctaacggaa-gctgatgtgacagttagtga 35166801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 314 - 454
Target Start/End: Complemental strand, 30953075 - 30952936
Alignment:
Q  314 agtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtcccct 413  Q
    ||||||||||||||||||| ||| |||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||  |||  ||||||||| || |    
T  30953075 agtccttacattttgcgcctcttagaagaatggtccctacatttcattaaatgtttttaaaatcctaacattttatctcggttattaaaattagt-cctt 30952977  T
Q  414 gatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    | |||||||||| |||| ||||| ||||||||| |||||||    
T  30952976 gttgttaattctctaacagaatgttgatgtggcggttagtg 30952936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 295 - 410
Target Start/End: Complemental strand, 26168487 - 26168370
Alignment:
Q  295 aaaagttaaatatatttttagtccttacattttgcgcccctttgaagaatattc--cctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| |||||| ||  ||||||||||||||||||||| |||||||  ||||||||||||     
T  26168487 aaaagttaaatatgtttttaatccttacattttgcgcccctttgtagaatagtcctcctacattttattaaatgtttctaaaatctccacattttatctt 26168388  T
Q  393 tattaacaaaattagtcc 410  Q
    | ||| ||||||||||||    
T  26168387 tgttatcaaaattagtcc 26168370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 300 - 452
Target Start/End: Complemental strand, 35469151 - 35469000
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcaca-ttttatctctattaa 398  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||||| ||| ||||||| |||||| |||||||||||||||| | |||||||||  |||     
T  35469151 ttaaatatatttttaatccttacatttcgcgccccattgaagaataatccttacatttcattaaa-gtttttaaaatcctcaaatttttatctccgttat 35469053  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttag 452  Q
    |||||||| | || || |||||||||||||||||||| ||| |||| |||||||    
T  35469052 caaaattaat-ccatgttgttaattctttaacggaatactgctgtgacagttag 35469000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 454
Target Start/End: Original strand, 5544788 - 5544939
Alignment:
Q  302 aaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaa 401  Q
    |||||| ||||||||||| ||||||||||| | ||||||||||| | |||| |||| ||||||| |||||||||| |||||||||||||||  |||   |    
T  5544788 aaatatctttttagtcctcacattttgcgcgcatttgaagaatagttcctatatttcattaaatatttttaaaattctcacattttatctcctttattca 5544887  T
Q  402 aattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||||| || |  |||||||| |||||||||||| |||||||||||||||||    
T  5544888 aattagt-ccatactgttaattttttaacggaatgttgatgtggcagttagtg 5544939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 299 - 392
Target Start/End: Original strand, 38759705 - 38759798
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||||||||||| |||||||||| |||||||||||| ||  ||||||| ||||||||||||||||||||||| ||||||||||    
T  38759705 gttaaatatttttttagtccttaaattttgcgcctctttgaagaatagtctatacatttcattaaatgtttttaaaatcctcaaattttatctc 38759798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 297 - 454
Target Start/End: Complemental strand, 1791640 - 1791483
Alignment:
Q  297 aagttaaatatattttt-agtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctat 395  Q
    ||||||||||| ||||| | |||||  ||||||| |||||||||| |||| | |  |||||||||||||||||||||||||| | ||||||||||||  |    
T  1791640 aagttaaatatgttttttaatccttgtattttgctcccctttgaaaaatagttctcacattttattaaatgtttttaaaatctttacattttatctccgt 1791541  T
Q  396 taacaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||  ||||||||| | ||| |||||||||| |||| ||||| |||||||||||||||||    
T  1791540 tattaaaattagt-ctctgctgttaattctctaactgaatgttgatgtggcagttagtg 1791483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 300 - 454
Target Start/End: Complemental strand, 29692000 - 29691847
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaac 399  Q
    |||||||| ||||||||| || |||||| ||| |||||||| |||| |   || |||| ||||||| ||||||||||||||||||||||||||| ||| |    
T  29692000 ttaaatatgtttttagtctttgcattttacgctcctttgaataatagtttttatatttcattaaatatttttaaaatcctcacattttatctctgttatc 29691901  T
Q  400 aaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||||||| || ||  ||||||||| |||||||| | |||||||| ||||||||    
T  29691900 aaaattagt-ccatgcggttaattctctaacggaacgttgatgtggtagttagtg 29691847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 298 - 446
Target Start/End: Original strand, 1791148 - 1791295
Alignment:
Q  298 agttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctatta 397  Q
    |||||||||| ||||||||| ||| ||||| | || |||||||||||| ||| ||||||| |||||||||||| |||||||||| | |||||  || |||    
T  1791148 agttaaatatgtttttagtcgttaaattttacacctctttgaagaatagtccatacatttcattaaatgttttaaaaatcctcaaactttatacctgtta 1791247  T
Q  398 acaaaattagtcccctgatgttaattctttaacggaatgctgatgtggc 446  Q
     |||||||||| |  || |||||||||| |||||||||||| |||||||    
T  1791248 tcaaaattagt-cgatgttgttaattctctaacggaatgctaatgtggc 1791295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 309 - 392
Target Start/End: Original strand, 26984155 - 26984238
Alignment:
Q  309 tttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||  ||| |||||||||| |||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||    
T  26984155 tttttagtttttatattttgcgcctctttgaagaatagtccctagactttattaaatgtttttaaaatcctcacattttatctc 26984238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 319 - 454
Target Start/End: Original strand, 30608266 - 30608400
Alignment:
Q  319 ttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtcccctgatgt 418  Q
    |||||||||||| |  ||||||||||| ||||||||||| |||| || ||||||||||||||||||||||||||  ||| |||||||||| | ||| | |    
T  30608266 ttacattttgcgtcattttgaagaatagtccctacatttcattatatatttttaaaatcctcacattttatctccgttatcaaaattagt-ctctgctat 30608364  T
Q  419 taattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||||| |||| | ||  |||||||||||||||||    
T  30608365 taattctctaacaggatattgatgtggcagttagtg 30608400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 299 - 454
Target Start/End: Complemental strand, 48760204 - 48760050
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||||| |||| ||| |||| |  ||||||||||| | | |||| || ||||||||||||||||||| ||||||||||||||| |||     
T  48760204 gttaaatatgtttttagttcttatattgtgcgtctttttgaagaatagttcgtacaattcattaaatgtttttaaaatcttcacattttatctctgttat 48760105  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||| | || || |||||||||| | | |||||| | |||||||||||||||    
T  48760104 caaaattaat-ccatgttgttaattctctgaaggaatgttaatgtggcagttagtg 48760050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 299 - 455
Target Start/End: Original strand, 34294453 - 34294601
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||||||||||||| |||||||||| | || ||||||||||| ||| ||||||| ||||||||||||||||||| ||||     ||||| ||||     
T  34294453 gttaaatatatttttagtc-ttacattttgtgtccatttgaagaatagtcc-tacatttcattaaatgtttttaaaatcttcac-----atctccattat 34294545  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtga 455  Q
     ||||||| |   |||||||||||||||||||| ||| |||||||| ||||||||||    
T  34294546 taaaattaat-atctgatgttaattctttaacgaaatactgatgtgtcagttagtga 34294601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 319 - 445
Target Start/End: Original strand, 34129015 - 34129140
Alignment:
Q  319 ttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtcccctgatgt 418  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||| ||||||||||| |||| |||||||||   ||| |||| ||||| |  || |||    
T  34129015 ttacattttgcgtccctttgaagaatagtccctatattttattaaacgtttttaaaattctcatattttatcttcgttatcaaagttagt-ctatgttgt 34129113  T
Q  419 taattctttaacggaatgctgatgtgg 445  Q
    ||||||| |||||| ||||| ||||||    
T  34129114 taattctctaacgggatgctaatgtgg 34129140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 299 - 392
Target Start/End: Original strand, 54142326 - 54142419
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| || ||||||| ||||||||||||  |||||||||||| ||| ||||||| | ||||||||||||||||||| ||||||| ||||    
T  54142326 gttaaatatgttattagtccctacattttgcgcgactttgaagaatagtccatacatttcaataaatgtttttaaaatccttacattttctctc 54142419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 54143590 - 54143497
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| || ||||||| || ||||||| |  |||||||||||| ||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  54143590 gttaaatatgttattagtccctatattttgcacgactttgaagaatagtccctacattttaataaatgtttttaaaatccttacattttctctc 54143497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 393
Target Start/End: Original strand, 48759813 - 48759905
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctct 393  Q
    ||||||||| ||||||||| ||||||||| ||| | |||||| |||| ||| ||| |||||||||||||||||||||| ||||||||||||||||    
T  48759813 gttaaatatgtttttagtcgttacattttacgctcatttgaa-aatagtccttac-ttttattaaatgtttttaaaattctcacattttatctct 48759905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 299 - 388
Target Start/End: Complemental strand, 17288462 - 17288373
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttta 388  Q
    ||||||||| || ||||||| ||||||||||||  ||||||| |||| ||||||||||| | ||||||||||||||||||  ||||||||    
T  17288462 gttaaatatgttattagtccctacattttgcgctactttgaataatagtccctacatttcaataaatgtttttaaaatccctacatttta 17288373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 409
Target Start/End: Original strand, 52398691 - 52398791
Alignment:
Q  309 tttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagt 408  Q
    |||||| ||||||||||||||||| |||||||||||| || || ||||||||||||| |||||||||| || | ||||||| |   ||| ||||||||||    
T  52398691 tttttattccttacattttgcgccactttgaagaatagtctctgcattttattaaatatttttaaaattcttatattttattttcgttatcaaaattagt 52398790  T
Q  409 c 409  Q
    |    
T  52398791 c 52398791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 3288261 - 3288402
Alignment:
Q  29 aagattggataatccagaaatatttaaaattccttttgaagtcagcaattcaaatttctattatttgtttt--ttcttaaagattcttaatgagtgtaat 126  Q
    ||||||| ||||||||  || ||| |||||||||||||| ||||||| ||||||||  ||| || ||||||  || | |||||||| || ||| ||||||    
T  3288261 aagattgaataatccaacaacattaaaaattccttttgatgtcagcagttcaaattggtatgatatgtttttcttttaaaagattcctagtgactgtaat 3288360  T
Q  127 accacttagt--catgggtcatggcttagttgtcaagttact 166  Q
    ||||| | ||  ||||||||||||||| ||||||||||||||    
T  3288361 accacgttgtcacatgggtcatggcttggttgtcaagttact 3288402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 310 - 454
Target Start/End: Complemental strand, 25917116 - 25916971
Alignment:
Q  310 ttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatct--ctattaacaaaattag 407  Q
    |||||||||| |||||||||| |  ||||||||||| ||| ||||||| ||||||||||||||||||  ||| |||||||||   | |||  ||||||||    
T  25917116 ttttagtcctcacattttgcgtctatttgaagaataatccatacatttcattaaatgtttttaaaattttcatattttatcttcgtgttatgaaaattag 25917017  T
Q  408 tcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |   ||| | |||||||| ||||| |||||||||||| |||||||||    
T  25917016 t-gtctgcttttaattctctaacgaaatgctgatgtgacagttagtg 25916971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 54168912 - 54168824
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| |||||| ||| || ||||||||   |||||||||||| ||||||||||||| ||||| ||||||||||||  |||||||    
T  54168912 gttaaatatgtttttaatccctatattttgcgtgactttgaagaataatccctacattttaataaatatttttaaaatccctacatttt 54168824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 444
Target Start/End: Complemental strand, 30048071 - 30047961
Alignment:
Q  333 cctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtcccctgatgttaattctttaacgg 432  Q
    ||||||||||| | | | ||||||| ||||||| ||||||||||||||| ||||||||||  |||  ||||||||| | ||| |||||||| | ||||||    
T  30048071 cctttgaagaacagttcttacatttcattaaatatttttaaaatcctcatattttatctccgttattaaaattagt-ctctgttgttaattatctaacgg 30047973  T
Q  433 aatgctgatgtg 444  Q
    |||| |||||||    
T  30047972 aatgttgatgtg 30047961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 444
Target Start/End: Complemental strand, 30062412 - 30062302
Alignment:
Q  333 cctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtcccctgatgttaattctttaacgg 432  Q
    ||||||||||| | | | ||||||| ||||||| ||||||||||||||| ||||||||||  |||  ||||||||| | ||| |||||||| | ||||||    
T  30062412 cctttgaagaacagttcttacatttcattaaatatttttaaaatcctcatattttatctccgttattaaaattagt-ctctgttgttaattatctaacgg 30062314  T
Q  433 aatgctgatgtg 444  Q
    |||| |||||||    
T  30062313 aatgttgatgtg 30062302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 387
Target Start/End: Original strand, 55347563 - 55347649
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    |||||||||||||| |||| |||||||| |||   ||||| ||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  55347563 ttaaatatatttttggtccctacattttacgcaattttga-gaatagtccctacattttaataaatgtttttaaaatccctacatttt 55347649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 300 - 374
Target Start/End: Original strand, 3296719 - 3296793
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaa 374  Q
    ||||||||||||||  ||| |||||||||||   |||||||||||| ||| ||||||||| ||||||||||||||    
T  3296719 ttaaatatatttttgatccctacattttgcgtgactttgaagaatagtccttacattttaataaatgtttttaaa 3296793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 19310788 - 19310834
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaata 345  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||    
T  19310788 gttaaatatgtttttagtccttacattttgcgcctctttgaagaata 19310834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 392
Target Start/End: Original strand, 12922643 - 12922735
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| ||||||||||||   ||||| ||||| ||||||||||| | ||||||||||||||||||  ||||||| ||||    
T  12922643 gttaaatatgtttttggtccctacattttgcgcaattttga-gaatagtccctacatttcaataaatgtttttaaaatccctacattttttctc 12922735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 378
Target Start/End: Original strand, 10580041 - 10580120
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcc 378  Q
    ||||||||| ||||| |||| |||||||||||   ||||||| |||| ||| ||||||| | ||||||||||||||||||    
T  10580041 gttaaatatgtttttggtccatacattttgcgtgactttgaaaaatagtccttacatttcaataaatgtttttaaaatcc 10580120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 398
Target Start/End: Original strand, 12107708 - 12107805
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    |||||||| ||||| |||| |||||||| |||   ||||| ||||| | ||||||||||| ||||||||| ||||||||  |||||||||||| |||||    
T  12107708 ttaaatatgtttttggtccctacattttacgcgattttga-gaataatacctacattttaataaatgtttctaaaatccctacattttatctccattaa 12107805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 374
Target Start/End: Original strand, 48554071 - 48554145
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaa 374  Q
    |||||||| ||||| |||| |||||||||||   |||||||||||| ||| ||||||||| |||||| |||||||    
T  48554071 ttaaatatgtttttggtccctacattttgcgtgactttgaagaatagtccttacattttaataaatgcttttaaa 48554145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 2669526 - 2669434
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  ||||||| ||||    
T  2669526 gttaaatatgtttttggtccctacattttacgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatccctacattttttctc 2669434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 392
Target Start/End: Original strand, 40841463 - 40841555
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| |||||||| |||   ||| ||||||| ||||||||||| | ||||||||||||||||||  ||||||| ||||    
T  40841463 gttaaatatgtttttggtccctacattttacgcgatttt-aagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctc 40841555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 43980077 - 43979985
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| ||||||||||||   ||||| ||||| ||||||||||| | | ||||||||||||||||  ||||||| ||||    
T  43980077 gttaaatatgtttttggtccctacattttgcgcgattttga-gaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctc 43979985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 388
Target Start/End: Complemental strand, 49426441 - 49426352
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttta 388  Q
    ||||||||| ||||| |||| |||||||||| |  |||| || |||| ||| ||||||| | ||||| ||||||||||||| ||||||||    
T  49426441 gttaaatatgttttttgtccctacattttgctctactttaaataatagtccttacatttcaataaatatttttaaaatccttacatttta 49426352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 28957312 - 28957399
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  28957312 gttaaatatgtttttggtccctacattttacgcgattttga-gaataatccctacatttcaataaatgtttttaaaatccctacatttt 28957399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 28957830 - 28957743
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  28957830 gttaaatatgtttttggtccctacattttacgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatccctacatttt 28957743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 31227880 - 31227967
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  31227880 gttaaatatgtttttggtccctacattttacgcgattttga-gaataatccctacatttcaataaatgtttttaaaatccctacatttt 31227967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 29691828 - 29691749
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcc 378  Q
    ||||||||| ||||| ||||||||||||||||   |||| || |||| ||  ||||||| | ||||||||||||||||||    
T  29691828 gttaaatatgtttttggtccttacattttgcgtgactttaaaaaatagtctttacatttcaataaatgtttttaaaatcc 29691749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 1791322 - 1791368
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaata 345  Q
    ||||||||| ||||||||||||||||||||||   ||||||||||||    
T  1791322 gttaaatatgtttttagtccttacattttgcgtgactttgaagaata 1791368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 32192442 - 32192480
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgccccttt 337  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  32192442 gttaaatatgtttttagtcctcacattttgcgccccttt 32192480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 388
Target Start/End: Original strand, 49424454 - 49424544
Alignment:
Q  298 agttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttta 388  Q
    ||||||||||||||||  ||| || |||||||||  ||||||| |||| ||  ||||| | | ||||||||||||||||||  ||||||||    
T  49424454 agttaaatatattttttatccctatattttgcgctactttgaataatagtctttacatatcaataaatgtttttaaaatccctacatttta 49424544  T

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Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 392
Target Start/End: Original strand, 789896 - 789988
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| ||||||||||||   |||||| |||| ||| ||||||| | | ||||||||||||||||  ||||||| ||||    
T  789896 gttaaatatgtttttggtccctacattttgcgcaattttgaa-aatagtccatacatttcaatgaatgtttttaaaatccctacattttttctc 789988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 393
Target Start/End: Complemental strand, 12108337 - 12108284
Alignment:
Q  340 agaatattccctacattttattaaatgtttttaaaatcctcacattttatctct 393  Q
    |||||| ||||||||||| | ||||||||||||||||||  ||||||| |||||    
T  12108337 agaatagtccctacatttcaataaatgtttttaaaatccctacattttttctct 12108284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 376
Target Start/End: Original strand, 17287488 - 17287565
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaat 376  Q
    ||||||||| || ||||||| ||||||||||||  |||| || |||| ||| ||||||| | ||||| ||||||||||    
T  17287488 gttaaatatgttattagtccctacattttgcgctactttaaataatagtccttacatttcaataaatatttttaaaat 17287565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 376
Target Start/End: Original strand, 46262636 - 46262712
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaat 376  Q
    ||||||||| ||||| |||| ||||||||||||   |||||| |||| ||||||||||| | | ||||||||||||||    
T  46262636 gttaaatatgtttttggtccctacattttgcgcaattttgaa-aatagtccctacatttcaatgaatgtttttaaaat 46262712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 28505210 - 28505297
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||||| |   ||||| ||||| ||| ||||||| | ||||||||||||||||||  |||||||    
T  28505210 gttaaatatgtttttggtccctacattttgcacgattttga-gaatagtccttacatttcaataaatgtttttaaaatccctacatttt 28505297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 374
Target Start/End: Complemental strand, 35166748 - 35166708
Alignment:
Q  334 ctttgaagaatattccctacattttattaaatgtttttaaa 374  Q
    |||||||||||| ||| ||||||||| ||||||||||||||    
T  35166748 ctttgaagaatagtccttacattttaataaatgtttttaaa 35166708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 38026195 - 38026108
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| || | |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  38026195 gttaaatatgtttttggttcctacattttacgcaattttga-gaatagtccctacatttcaataaatgtttttaaaatccctacatttt 38026108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 387
Target Start/End: Complemental strand, 40841942 - 40841894
Alignment:
Q  339 aagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  40841942 aagaatagtccctacatttcaataaatgtttttaaaatccctacatttt 40841894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 54167495 - 54167583
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| |||| ||||| |||||||||||    ||| ||||||| ||| || |||| | ||||||||||||||||||  |||||||    
T  54167495 gttaaatatgttttaagtccctacattttgcgtgattttcaagaatagtccttatatttcaataaatgtttttaaaatccctacatttt 54167583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 387
Target Start/End: Complemental strand, 55348018 - 55347970
Alignment:
Q  339 aagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  55348018 aagaatagtccctacatttcaataaatgtttttaaaatccctacatttt 55347970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 2e-56; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 299 - 454
Target Start/End: Complemental strand, 21217410 - 21217256
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |  ||||    
T  21217410 gttaaatatgtttttagtccttacattttgcgccgctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatccccgttaa 21217311  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  21217310 caaaattagt-ccctgccgttaattctttaacggaatgctgatgtggcagttagtg 21217256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 21264992 - 21265146
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |  ||||    
T  21264992 gttaaatatgtttttagtccttacattttgcgccgctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatccccgttaa 21265091  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  21265092 caaaattagt-ccctgccgttaattctttaacggaatgctgatgtggcagttagtg 21265146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 2517414 - 2517568
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    |||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||  |||     
T  2517414 gttaaatatatttttagtccttacattttgcgtctctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatctccgttat 2517513  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| |  || |||||| ||||||||||||||||||||||||||||||||    
T  2517514 caaaattagt-ctttgttgttaactctttaacggaatgctgatgtggcagttagtg 2517568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 21216924 - 21217078
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| | ||     
T  21216924 gttaaatatctttttagtccttacattttgcgcctctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatctccactat 21217023  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| || || |||||||||| ||||||||||||||| ||||||||||||    
T  21217024 caaaattagt-ccttgctgttaattctctaacggaatgctgatatggcagttagtg 21217078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 299 - 454
Target Start/End: Complemental strand, 21265478 - 21265324
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| | ||     
T  21265478 gttaaatatctttttagtccttacattttgcgcctctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatctccactat 21265379  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| || || |||||||||| ||||||||||||||| ||||||||||||    
T  21265378 caaaattagt-ccttgctgttaattctctaacggaatgctgatatggcagttagtg 21265324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 2191218 - 2191372
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||  |||     
T  2191218 gttaaatatgtttttagtccttacattttgcgcccctttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacattttatctccgttat 2191317  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| || || |||||||||||||||| | | ||||||||||||||||||    
T  2191318 caaaattagt-ccatgttgttaattctttaacgaactactgatgtggcagttagtg 2191372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 21182308 - 21182462
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||  ||||||||||||||| |||     
T  21182308 gttaaatatgtttttagtccttacattttgcgcccctttgaagaatagtccttacatttcattaaatgtttttaaaattttcacattttatctctgttat 21182407  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| | ||| |||||||||| ||||| ||||||||||||||||||||||    
T  21182408 caaaattagt-ctctgttgttaattctctaacgaaatgctgatgtggcagttagtg 21182462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 299 - 454
Target Start/End: Complemental strand, 3691478 - 3691324
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||  |||     
T  3691478 gttaaatatgtttttagtccttgtattttgcgcccctttgaagaatagtccctacatttcattaaatgtttttaaaatcttcacattttatctccgttat 3691379  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| || || |||||||| | |||||||||| |||||||||||||||||    
T  3691378 caaaattagt-ccatgctgttaattttctaacggaatgttgatgtggcagttagtg 3691324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 299 - 455
Target Start/End: Complemental strand, 21267457 - 21267302
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||||||||||||| ||  ||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||| |  ||||     
T  21267457 gttaaatatgtttttagtccttacatttttcgatcctttgaagaatagtccctacatttcattaaatgttttaaaaatcctcacattttatattcattat 21267358  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtga 455  Q
    |||||||||| | |||||||||||||| ||| |||||||||||||| ||||||||||    
T  21267357 caaaattagt-cactgatgttaattctctaatggaatgctgatgtgccagttagtga 21267302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 299 - 453
Target Start/End: Original strand, 24093157 - 24093310
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || |||   |||     
T  24093157 gttaaatatgtttttagtccttacactttgcgcccctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacatcttctcttcgttat 24093256  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagt 453  Q
    |||||| ||| || || |||||||||| |||||||||||||||||| ||||||||    
T  24093257 caaaatcagt-ccatgttgttaattctctaacggaatgctgatgtgacagttagt 24093310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 32114167 - 32114320
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||  ||     
T  32114167 gttaaatatgtttttagtccttacattttacgccc-tttgaagaatagtccctacaatctattaaatgtttttaaaatcctcacattttatctctgatat 32114265  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| | ||  |||||||||| |||||||||| ||||||||| |||||||    
T  32114266 caaaattagt-cgctactgttaattctctaacggaatgttgatgtggcggttagtg 32114320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 301 - 455
Target Start/End: Original strand, 7083525 - 7083678
Alignment:
Q  301 taaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaaca 400  Q
    ||||||| |||||| |||||||||||| || || ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||  |||  |    
T  7083525 taaatatgtttttaatccttacattttacgtccatttgaagaatagtccctacatttcattaaatttttttaaaatcctcacattttatctcccttataa 7083624  T
Q  401 aaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtga 455  Q
    ||| ||||   ||| |||||||||| |||||||||||||||||||||||||||||    
T  7083625 aaaatagt-atctgttgttaattctctaacggaatgctgatgtggcagttagtga 7083678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 313 - 455
Target Start/End: Complemental strand, 10706724 - 10706585
Alignment:
Q  313 tagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtcccc 412  Q
    ||||||||||||||||||||||||||||||||| ||  || |||| ||||||| ||||||||||||||||||||||||||  ||| ||||| |||| |||    
T  10706724 tagtccttacattttgcgcccctttgaagaatagtc--tatatttcattaaatatttttaaaatcctcacattttatctccgttatcaaaactagt-ccc 10706628  T
Q  413 tgatgttaattctttaacggaatgctgatgtggcagttagtga 455  Q
    || |||||||||| |||| ||||| ||||||||||||||||||    
T  10706627 tgctgttaattctctaacagaatgttgatgtggcagttagtga 10706585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 299 - 450
Target Start/End: Complemental strand, 32114560 - 32114410
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    |||||||||||||||||||||||||||||||||| |||  ||||||| ||| ||||||| ||||||| |||||||||| |||||| ||||||||| |||     
T  32114560 gttaaatatatttttagtccttacattttgcgcctcttcaaagaatagtccttacatttcattaaatatttttaaaattctcacactttatctctgttat 32114461  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagtt 450  Q
    |||||||||||| | |  ||||||||||||| |||||| |||||||| ||||    
T  32114460 caaaattagtccac-gtagttaattctttaaaggaatgatgatgtggtagtt 32114410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 300 - 454
Target Start/End: Complemental strand, 24093644 - 24093491
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaac 399  Q
    |||||||| ||||||  ||||||||||||| ||| ||||||||||| | |||| |||||||||||||||||||||||||| ||||||||||||  ||| |    
T  24093644 ttaaatatctttttaacccttacattttgcacccatttgaagaatagtgcctatattttattaaatgtttttaaaatccttacattttatctccgttatc 24093545  T
Q  400 aaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||||||| || || | |||||||||||||||||| ||||| ||| ||||||||    
T  24093544 aaaattagt-ccatgctcttaattctttaacggaatactgatatggtagttagtg 24093491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 308 - 451
Target Start/End: Original strand, 3691093 - 3691235
Alignment:
Q  308 atttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattag 407  Q
    |||||||||||||| ||||||||||| ||||||||||| | ||||||||| |||||||||||||||||||||||||||||||| |  ||| |||||||||    
T  3691093 atttttagtccttatattttgcgcccttttgaagaatagttcctacatttcattaaatgtttttaaaatcctcacattttatcaccgttatcaaaattag 3691192  T
Q  408 tcccctgatgttaattctttaacggaatgctgatgtggcagtta 451  Q
    | |||||  ||||||||| |||||| ||| | ||||||| ||||    
T  3691193 t-ccctgcagttaattctctaacgggatgttaatgtggcggtta 3691235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 349 - 455
Target Start/End: Complemental strand, 2606695 - 2606590
Alignment:
Q  349 cctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcag 448  Q
    ||||||||| |||||||||||||||||| |||| ||||||||||   || ||||||||||||  || |||||||||||||||| ||||||||||||||||    
T  2606695 cctacatttcattaaatgtttttaaaattctcatattttatctccgctatcaaaattagtcca-tgctgttaattctttaacgaaatgctgatgtggcag 2606597  T
Q  449 ttagtga 455  Q
    |||||||    
T  2606596 ttagtga 2606590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 309 - 451
Target Start/End: Complemental strand, 39729685 - 39729544
Alignment:
Q  309 tttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagt 408  Q
    ||||||||||||| |||||||| |  ||||||||||| ||  || |||| ||||||| ||||||||||||||||||||||||||  ||| | ||||||||    
T  39729685 tttttagtccttatattttgcgtcagtttgaagaatagtctttatatttcattaaatatttttaaaatcctcacattttatctccgttatcgaaattagt 39729586  T
Q  409 cccctgatgttaattctttaacggaatgctgatgtggcagtta 451  Q
     |  || |||||||||| |||||||||| | ||||| ||||||    
T  39729585 -ctatgttgttaattctctaacggaatgttaatgtgacagtta 39729544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 32860815 - 32860968
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||| | ||| |||||||| ||||||||| |||| ||  || |||| ||||||||||||||||||||| ||||||||||||  | |     
T  32860815 gttaaatatgtttttagcctttatattttgcgtccctttgaaaaatagtcgttatatttcattaaatgtttttaaaatcctaacattttatctccgtgat 32860914  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||||||| |   || | |||||||| |||||||||| || ||||||||||||||    
T  32860915 caaaattag-ctattgttattaattctctaacggaatgttg-tgtggcagttagtg 32860968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 23222952 - 23222864
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| |||||||||| ||||||||||||  |||| || |||| ||| ||||||| | || ||||||||||||||||||||||||    
T  23222952 gttaaatatgtttttagtccctacattttgcgcaactttaaataatagtccttacatttcaatatatgtttttaaaatcctcacatttt 23222864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 392
Target Start/End: Original strand, 2035609 - 2035702
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| || ||||| | | | ||| ||||||| ||||||||||||| ||||||||||||||||||  ||||||||||||    
T  2035609 gttaaatatgtttttggtccctatattttaccctcttttaaagaataatccctacattttaataaatgtttttaaaatccctacattttatctc 2035702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 18107514 - 18107435
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcc 378  Q
    ||||||||| |||||||||| | |||||||||   |||| ||||||| ||| ||||||||| ||||||||||||||||||    
T  18107514 gttaaatatgtttttagtccctgcattttgcgtgactttaaagaataatccttacattttaataaatgtttttaaaatcc 18107435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 300 - 374
Target Start/End: Original strand, 2191392 - 2191466
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaa 374  Q
    |||||||| ||||| |||||||||||||||    |||||||||||| ||| ||||||||| ||||||||||||||    
T  2191392 ttaaatatgtttttggtccttacattttgcttgactttgaagaataatccttacattttaataaatgtttttaaa 2191466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 334 - 411
Target Start/End: Complemental strand, 3624967 - 3624891
Alignment:
Q  334 ctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtccc 411  Q
    |||||||||||| ||||||||||| | |||||||||||||||| || |||||||| ||   || ||||||||||||||    
T  3624967 ctttgaagaatagtccctacatttcaataaatgtttttaaaattct-acattttaccttcttttacaaaattagtccc 3624891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 3854586 - 3854494
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| ||||||||||||   ||||| ||||| ||||||||||| | | ||||||||||||||||  ||||||| ||||    
T  3854586 gttaaatatgtttttggtccctacattttgcgcgattttga-gaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctc 3854494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 1804233 - 1804320
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  1804233 gttaaatatgtttttggtccctacattttacgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatccctacatttt 1804320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 1804751 - 1804664
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  1804751 gttaaatatgtttttggtccctacattttacgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatccctacatttt 1804664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 6476088 - 6476175
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  6476088 gttaaatatgtttttggtccctacattttacgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatccctacatttt 6476175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 6476606 - 6476519
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  6476606 gttaaatatgtttttggtccctacattttacgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatccctacatttt 6476519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 10709476 - 10709564
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| ||| ||| ||||||||    ||||||||||| ||| ||||||| | ||||||||||||||||||  |||||||    
T  10709476 gttaaatatgtttttggtctttagattttgcgtgattttgaagaatagtccttacatttcaataaatgtttttaaaatccctacatttt 10709564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 11451275 - 11451188
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  11451275 gttaaatatgtttttggtccctacattttacgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatccctacatttt 11451188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 27377650 - 27377737
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  27377650 gttaaatatgtttttggtccctacattttacgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatccctacatttt 27377737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 39947175 - 39947087
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| ||||||||| |   ||||||| |||| ||| ||||||| | ||||||||||||||||||  |||||||    
T  39947175 gttaaatatgtttttggtccctacattttgagtgactttgaacaatagtccttacatttcaataaatgtttttaaaatccgtacatttt 39947087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 393
Target Start/End: Complemental strand, 2036692 - 2036598
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctct 393  Q
    ||||||||| || ||| ||| |||||||| | ||  ||| ||||||| ||||||||||| | | ||||||||||||||||  | |||||||||||    
T  2036692 gttaaatatgttattaatccctacattttacacctttttaaagaatagtccctacatttcaattaatgtttttaaaatccctatattttatctct 2036598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 365
Target Start/End: Original strand, 30311194 - 30311264
Alignment:
Q  295 aaaagttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaat 365  Q
    |||| |||||||| ||||  ||||||||||||||| | | |||||| |||| ||| |||||||||||||||    
T  30311194 aaaaattaaatatgttttcggtccttacattttgcactcatttgaaaaatagtccttacattttattaaat 30311264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 376
Target Start/End: Original strand, 10708024 - 10708101
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaat 376  Q
    ||||||||| ||||| |||| |||||||||| | | |||||  |||| ||| ||||||| | ||||||||||||||||    
T  10708024 gttaaatatgtttttggtccctacattttgccctcttttgacaaatagtccttacatttcaataaatgtttttaaaat 10708101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 12090214 - 12090122
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| | ||||||||||   ||||| ||||| ||||||||||| | | ||||||||||||||||  ||||||| ||||    
T  12090214 gttaaatatgtttttggtccctgcattttgcgcgattttga-gaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctc 12090122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 376
Target Start/End: Original strand, 18105753 - 18105794
Alignment:
Q  335 tttgaagaatattccctacattttattaaatgtttttaaaat 376  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  18105753 tttgaagaatattccctacatttcaataaaggtttttaaaat 18105794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 368
Target Start/End: Original strand, 39600773 - 39600842
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtt 368  Q
    ||||||||| |||||| ||||||||||||||| | |||  ||||||| ||  ||||||| ||||||||||    
T  39600773 gttaaatatgtttttaatccttacattttgcgtctcttgaaagaatagtctttacatttcattaaatgtt 39600842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 11450757 - 11450844
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | |||||||||| |||||||  |||||||    
T  11450757 gttaaatatgtttttggtccctacattttacgcgattttga-gaataatccctacatttcaataaatgttttaaaaatccctacatttt 11450844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 27378168 - 27378081
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | |||||||||| |||||||  |||||||    
T  27378168 gttaaatatgtttttggtccctacattttacgcgattttga-gaataatccctacatttcaataaatgttttaaaaatccctacatttt 27378081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 39097045 - 39096958
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||||| |   ||||| ||||| ||| ||||||| | ||||||||||||||||||  |||||||    
T  39097045 gttaaatatgtttttggtccctacattttgcacgattttga-gaataatccttacatttcaataaatgtttttaaaatccctacatttt 39096958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 379
Target Start/End: Original strand, 39945843 - 39945923
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcct 379  Q
    ||||||||| ||||| ||||  |||||||| |   ||||||| |||| ||| ||||||| | |||||||||||||||||||    
T  39945843 gttaaatatgtttttggtcccaacattttgagtgactttgaacaatagtccttacatttcaataaatgtttttaaaatcct 39945923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 3e-49; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 6297463 - 6297617
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| ||||| |||     
T  6297463 gttaaatatgtctttagtccttacattttgcgcccctttgaagaatagttcctacatttcattaaatgtttttaaaatcctcacattttctctctgttat 6297562  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| || || ||||||||||  |||||||||||||||||||||||||||    
T  6297563 caaaattagt-ccttgctgttaattctccaacggaatgctgatgtggcagttagtg 6297617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 9800040 - 9800194
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||  |||     
T  9800040 gttaaatatgtttttagtccttagattttgcgcctctttgaagaataatccttacattttattaaatgtttttaaaatcctcacatttcatctccgttat 9800139  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| |  || |||||||||| ||||||||||||||||||||||||||||    
T  9800140 caaaattagt-ctttgctgttaattctctaacggaatgctgatgtggcagttagtg 9800194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 13315203 - 13315357
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||||||||||||||||||| ||| ||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||| |||     
T  13315203 gttaaatatgtttttagtccttacattttgcgcccatttaaagaatagtccctacatttcattaaatgtttttaaaatcatcacattttatctctgttat 13315302  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||||||| ||  |  |||||||||| |||||||||| |||||||||||||||||    
T  13315303 caaaattag-ccattcctgttaattctctaacggaatgttgatgtggcagttagtg 13315357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 310 - 454
Target Start/End: Original strand, 16662180 - 16662323
Alignment:
Q  310 ttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtc 409  Q
    ||||||| |||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||| |||  |||||||||     
T  16662180 ttttagttcttacattttgcgctcctttgaagaatagtccctacatttcattaaatgtttttaaaattctcacattttatctctgttattaaaattagt- 16662278  T
Q  410 ccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||  |||||||||| ||||| ||||||||||||||||||||||    
T  16662279 ccctactgttaattctctaacgaaatgctgatgtggcagttagtg 16662323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 299 - 454
Target Start/End: Complemental strand, 17915595 - 17915442
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||||||||||||||||| || |||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||| |||     
T  17915595 gttaaatatgtttttagtccttacattttgtgctcctttgaagaatat-ccttacattttattaaatgttttttaaatcctcacattttatctctgttat 17915497  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| |  || ||||||||||||||| ||||  |||||||||||||||||    
T  17915496 caaaattagt-ctttgctgttaattctttaacagaatattgatgtggcagttagtg 17915442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 299 - 454
Target Start/End: Complemental strand, 26997958 - 26997804
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||||| ||||||||||||| || ||||||||||| ||| ||||||| ||||| | ||||||||||||||||||||||||||  |||     
T  26997958 gttaaatatgtttttagttcttacattttgcgtccatttgaagaatagtccatacatttcattaattatttttaaaatcctcacattttatctccgttat 26997859  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| ||||| |||||||||| ||||||||||||||||||| ||||||||    
T  26997858 caaaattagt-ccctgctgttaattctctaacggaatgctgatgtggtagttagtg 26997804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 299 - 451
Target Start/End: Complemental strand, 6298124 - 6297973
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||| | |||||||| ||||||||||||  |||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||| ||  |||     
T  6298124 gttaaatgtgtttttagtgcttacattttgcttccctttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacattttatttccgttat 6298025  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagtta 451  Q
    |||||||||| ||||  |||||||||| |||||||||||||||||||||||||    
T  6298024 caaaattagt-ccctattgttaattctctaacggaatgctgatgtggcagtta 6297973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 299 - 454
Target Start/End: Complemental strand, 21006211 - 21006057
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||| || ||||||||||||  ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||  |||     
T  21006211 gttaaatatgtttatactccttacatttttggcccctttgaaaaatagtccctacattttattaaatgtttttaaaatcctcacattttatctccgttat 21006112  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||||| |  ||||| |||||||||| ||| | ||||||||||||||||||||||    
T  21006111 caaaatt-gatccctgctgttaattctctaatgaaatgctgatgtggcagttagtg 21006057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 299 - 411
Target Start/End: Original strand, 17914198 - 17914310
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||| |||| |||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  17914198 gttaaatatgttttaagtctttacattttgcgtctctttgaagaatagtccctacattttattaaatgtttttaaaatcctcacattttatctctgttat 17914297  T
Q  399 caaaattagtccc 411  Q
    |||||||||||||    
T  17914298 caaaattagtccc 17914310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 301 - 454
Target Start/End: Complemental strand, 26243482 - 26243330
Alignment:
Q  301 taaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaaca 400  Q
    ||||||| ||||||||||||| ||||||||| ||||||||||||| || ||| |||| |||||||||||||||||||||||||||||||||| |||| ||    
T  26243482 taaatatgtttttagtccttatattttgcgctcctttgaagaatagtctctatatttcattaaatgtttttaaaatcctcacattttatctccattatca 26243383  T
Q  401 aaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||| |||| | | |||||||||| |||  ||||| ||||||| |||||||||    
T  26243382 aaatttgtccac-ggtgttaattctctaattgaatgttgatgtgacagttagtg 26243330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 10047480 - 10047624
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||| |||||||||||||||||| ||||||||||| |||||||| || |||||||||||||||||| |||||||||||||||  |||     
T  10047480 gttaaatatgtttttaatccttacattttgcgcccttttgaagaatagtccctaca-ttcattaaatgtttttaaaattctcacattttatctccgttat 10047578  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtgg 445  Q
    |||||||||| || || |||||||||| ||||||||  |||||||||    
T  10047579 caaaattagt-ccatgctgttaattctctaacggaacactgatgtgg 10047624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 301 - 454
Target Start/End: Complemental strand, 16662558 - 16662407
Alignment:
Q  301 taaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaaca 400  Q
    ||||||| ||||||||||||||||||||||| | ||||||||||| | ||||||||| |||||||||||||||||| |||| | ||||||||  ||  ||    
T  16662558 taaatatgtttttagtccttacattttgcgctcttttgaagaatagttcctacatttcattaaatgtttttaaaattctcata-tttatctccgttctca 16662460  T
Q  401 aaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||| | ||||| |||||||||| |||||||||| ||||||||| |||||||    
T  16662459 aaattaat-ccctgttgttaattctctaacggaatgttgatgtggcggttagtg 16662407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 298 - 445
Target Start/End: Complemental strand, 9800433 - 9800287
Alignment:
Q  298 agttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctatta 397  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||| ||| || |||| ||||||||||||||||||||| |||||||||||   |||    
T  9800433 agttaaatatatttttggtccttgcattttgcgcccctttgaagaatagtccatatatttcattaaatgtttttaaaatccttacattttatcttcgtta 9800334  T
Q  398 acaaaattagtcccctgatgttaattctttaacggaatgctgatgtgg 445  Q
     ||||||||||    || |||||||||| |||| ||||| ||||||||    
T  9800333 tcaaaattagt-ttatgctgttaattctctaacagaatgttgatgtgg 9800287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 300 - 406
Target Start/End: Original strand, 26720323 - 26720429
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaac 399  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||| ||||||| ||||||||||||  ||||||| ||||| |||||    
T  26720323 ttaaatatatttttagtccctacattttgcgctcctttgaagaatagtccctacatttcattaaatatttttaaaatccctacattttttctctgttaac 26720422  T
Q  400 aaaatta 406  Q
    | |||||    
T  26720423 acaatta 26720429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 303 - 455
Target Start/End: Original strand, 44024230 - 44024381
Alignment:
Q  303 aatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaa 402  Q
    ||||||||||||||||||| ||||||| | | ||||||||||| ||| ||||||| |  |||||||||||||||| |||||||||||| |  ||| ||||    
T  44024230 aatatatttttagtccttaaattttgcactcatttgaagaatagtccatacatttcaccaaatgtttttaaaatcatcacattttatccccgttatcaaa 44024329  T
Q  403 attagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtga 455  Q
    |||||| |  || |||||||||| |||||||||| ||||||| ||||||||||    
T  44024330 attagt-caatgttgttaattctctaacggaatgttgatgtgacagttagtga 44024381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 299 - 406
Target Start/End: Complemental strand, 7344945 - 7344838
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    |||| |||| |||||||||||||||||||| |||||||||||||||| ||| |||||||||||| |||||||||||||||||| ||||||| ||  |||     
T  7344945 gttatatatgtttttagtccttacattttgtgcccctttgaagaataatccatacattttattatatgtttttaaaatcctcatattttatgtccgttat 7344846  T
Q  399 caaaatta 406  Q
    ||||||||    
T  7344845 caaaatta 7344838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 298 - 454
Target Start/End: Original strand, 44148577 - 44148732
Alignment:
Q  298 agttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctatta 397  Q
    |||||||||| |||||||||| |||||||| ||| | ||||||||||| ||||||||||||| |||| ||||||||||||||||||||||  |||  |||    
T  44148577 agttaaatatgtttttagtccctacattttacgctcttttgaagaatagtccctacattttaataaacgtttttaaaatcctcacatttttactccgtta 44148676  T
Q  398 acaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
     ||||| |||| ||||   || |||| | ||||| |||| |||||||||||||||||    
T  44148677 tcaaaaatagt-ccctaccgtcaattatctaacgaaatgatgatgtggcagttagtg 44148732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 335 - 454
Target Start/End: Original strand, 12489265 - 12489383
Alignment:
Q  335 tttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtcccctgatgttaattctttaacggaa 434  Q
    ||||||||||| ||||||||||| ||||||| |||||||||||||| |||||||||| | ||| |||||||||| | ||| |||||||||| ||||||||    
T  12489265 tttgaagaatagtccctacatttcattaaatatttttaaaatcctcgcattttatctttgttatcaaaattagt-ctctgctgttaattctctaacggaa 12489363  T
Q  435 tgctgatgtggcagttagtg 454  Q
    || ||| |||| ||||||||    
T  12489364 tggtgacgtggtagttagtg 12489383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 309 - 451
Target Start/End: Complemental strand, 6297941 - 6297800
Alignment:
Q  309 tttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagt 408  Q
    ||||| |||| |||||||||||   |||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||  ||| ||||||||||    
T  6297941 tttttcgtccctacattttgcgtgactttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacattttatctccgttatcaaaattagt 6297842  T
Q  409 cccctgatgttaattctttaacggaatgctgatgtggcagtta 451  Q
     || || |||| ||||| |||  ||||| |||||||| |||||    
T  6297841 -ccttgttgttgattctctaatagaatgttgatgtggtagtta 6297800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 299 - 411
Target Start/End: Original strand, 40304685 - 40304797
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    |||||||||||||||||||| |||||||||| | |||||||  |||| ||| ||||||| | ||||| ||||||||||||||||||||||| ||| |||     
T  40304685 gttaaatatatttttagtccctacattttgcactcctttgataaatagtccatacatttaagtaaatatttttaaaatcctcacattttatatctgttac 40304784  T
Q  399 caaaattagtccc 411  Q
    |||| ||||||||    
T  40304785 caaatttagtccc 40304797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 455
Target Start/End: Complemental strand, 12489615 - 12489468
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||||||||||||||||||| |  | ||||||||| ||| ||||||| ||| ||||||||||||||||| ||||||||||||| |||     
T  12489615 gttaaatatgtttttagtccttacattttgcgtcgttatgaagaatagtccttacatttcatt-aatgtttttaaaatccttacattttatctctgttat 12489517  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtga 455  Q
     |  ||        || |||||||||| |||||||||||||||||| ||||||||||    
T  12489516 aatcat--------tgttgttaattctctaacggaatgctgatgtgacagttagtga 12489468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 351 - 453
Target Start/End: Original strand, 39234889 - 39234990
Alignment:
Q  351 tacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagtt 450  Q
    ||||||||||||||| |||| ||||| |||||||||||||||  ||| |||||||||| |  || |||||||||| |||||||||||||||||| |||||    
T  39234889 tacattttattaaatattttaaaaattctcacattttatctcagttatcaaaattagt-caatgctgttaattctctaacggaatgctgatgtgacagtt 39234987  T
Q  451 agt 453  Q
    |||    
T  39234988 agt 39234990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 410
Target Start/End: Complemental strand, 44803652 - 44803541
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| | |||||||| |||||||||||| |||||||  |||| ||||||||||| | |||| ||||||||||| |||||||||||| |  ||||     
T  44803652 gttaaatatgtgtttagtccctacattttgcgctcctttgataaatagtccctacatttaagtaaaagtttttaaaattctcacattttatattcattat 44803553  T
Q  399 caaaattagtcc 410  Q
    |||| |||||||    
T  44803552 caaatttagtcc 44803541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 453
Target Start/End: Complemental strand, 10047966 - 10047814
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaac 399  Q
    ||||||||||||||| |||||||||||| | | ||||||||||||| ||  || || | ||||||| ||||||||||  ||| ||||||||||  ||| |    
T  10047966 ttaaatatatttttaatccttacattttccactcctttgaagaatagtctttatatatcattaaatatttttaaaattttcatattttatctccgttatc 10047867  T
Q  400 aaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagt 453  Q
    ||||||||| |  |||||| ||||||  ||||||||| || ||| |||||||||    
T  10047866 aaaattagt-ctttgatgtcaattctacaacggaatgttgttgtagcagttagt 10047814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 387
Target Start/End: Original strand, 36155288 - 36155360
Alignment:
Q  315 gtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    |||| ||||||||| ||  ||||||| |||| ||||||||||||| ||||||||||||||||||| |||||||    
T  36155288 gtccctacattttgtgcgactttgaataatagtccctacattttaataaatgtttttaaaatccttacatttt 36155360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 299 - 389
Target Start/End: Original strand, 44802183 - 44802272
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttat 389  Q
    ||||||||| ||||||||||  ||||||||||| | |||||  |||| ||| ||||||| | ||| |||||||||||||||||||||||||    
T  44802183 gttaaatatgtttttagtcccaacattttgcgctcatttgataaatagtccatacatttaagtaa-tgtttttaaaatcctcacattttat 44802272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 454
Target Start/End: Complemental strand, 11089383 - 11089229
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcaca-ttttatctctatta 397  Q
    ||||| ||| |||||||| |||| ||||| ||| ||||| ||||||| ||  |||||||  |||||| ||||||||||||||| | ||||| |||| |||    
T  11089383 gttaagtatgtttttagttcttagatttttcgctcctttaaagaataatcattacatttcgttaaatatttttaaaatcctcatatttttagctctgtta 11089284  T
Q  398 acaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
      |||||||||   ||| |||||||| | ||||| |||| ||||||| |||||||||    
T  11089283 ttaaaattagt--tctgctgttaattatctaacgaaatgttgatgtgacagttagtg 11089229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 20682709 - 20682797
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| || || |||| || |||| ||||  |||||||||||| ||| ||||||||| ||||||||||||||||| ||| |||||    
T  20682709 gttaaatatcttattggtccctatatttagcgcgactttgaagaatagtccttacattttaataaatgtttttaaaatcttcatatttt 20682797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 4694521 - 4694442
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcc 378  Q
    ||||||||| |||||||||| || ||||| ||| | |||||  |||| ||||||||||| | ||||||||||||||||||    
T  4694521 gttaaatatgtttttagtccctatattttacgctcttttgataaatagtccctacatttaagtaaatgtttttaaaatcc 4694442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 21006038 - 21005959
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcc 378  Q
    ||||||||| ||||| |||| |||||||||||   ||||||| |||| ||| ||||||| | ||||||||||||||||||    
T  21006038 gttaaatatgtttttggtccctacattttgcgtggctttgaaaaatagtccttacatttcaataaatgtttttaaaatcc 21005959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 378
Target Start/End: Original strand, 44024399 - 44024478
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcc 378  Q
    ||||||||| ||||| ||||||||||||||||   ||||||| |||| ||| ||||||| | ||||| ||||||||||||    
T  44024399 gttaaatatgtttttggtccttacattttgcgtgactttgaaaaatagtccttacatttcaataaatatttttaaaatcc 44024478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 454
Target Start/End: Original strand, 17914962 - 17915000
Alignment:
Q  416 tgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  17914962 tgttaattctttaacggaatgctgatgtggtagttagtg 17915000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 4624534 - 4624622
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| ||||||| |||||||    |||||||||||| ||  ||||||| | ||||||||||||||||||  |||||||    
T  4624534 gttaaatatgtttttggtccttatattttgcatgactttgaagaatagtctttacatttcaataaatgtttttaaaatccctacatttt 4624622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 376
Target Start/End: Complemental strand, 45369200 - 45369134
Alignment:
Q  310 ttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaat 376  Q
    |||||||||||| |||||| || ||||| || |||| ||| ||||||| | ||||||||||||||||    
T  45369200 ttttagtccttatattttgtgctcctttaaaaaataatccttacatttcaataaatgtttttaaaat 45369134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 392
Target Start/End: Original strand, 12734174 - 12734266
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| ||||||||||||   |||| |||||| ||||||||||| | | ||| ||||||||||||  ||||||| ||||    
T  12734174 gttaaatatgtttttggtccctacattttgcgcgattttg-agaatagtccctacatttcaatgaatatttttaaaatccctacattttttctc 12734266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 20683014 - 20682925
Alignment:
Q  298 agttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    |||||||||| || || |||| ||||||| ||||   ||| ||||||  ||| ||||||||| |||||||||||||||||  ||||||||    
T  20683014 agttaaatatgttattggtccctacatttagcgcgattttaaagaatggtccttacattttaataaatgtttttaaaatctccacatttt 20682925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 392
Target Start/End: Original strand, 29917106 - 29917198
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| |||||  ||| ||| ||||||||   ||||| ||||| ||||||||||| | ||||||||||||||||||  ||||||| ||||    
T  29917106 gttaaatatgtttttgatccctacgttttgcgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatccctacattttttctc 29917198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 29917626 - 29917534
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| |||||||||| |   ||||| ||||| ||| ||||||| | ||||||||||||||||||  ||||||| ||||    
T  29917626 gttaaatatgtttttggtccctacattttgcacgattttga-gaatagtccttacatttcaataaatgtttttaaaatccctacattttttctc 29917534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 387
Target Start/End: Original strand, 16682528 - 16682620
Alignment:
Q  295 aaaagttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    |||| |||||||| ||||| ||| ||| |||||||||  |||| ||||||| ||  ||||||| |  ||||||||||||||| || |||||||    
T  16682528 aaaaattaaatatgtttttggtcattatattttgcgcgactttaaagaatagtcattacatttcaaaaaatgtttttaaaattcttacatttt 16682620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 22601540 - 22601588
Alignment:
Q  340 agaatattccctacattttattaaatgtttttaaaatcctcacatttta 388  Q
    |||||| ||||||||||| | |||||||||||||||| || ||||||||    
T  22601540 agaatagtccctacatttaaataaatgtttttaaaattcttacatttta 22601588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 3e-49; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 17075220 - 17075374
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||||||| |||||||||| |||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||| |  ||||    
T  17075220 gttaaatatgtttttagtccttatattttgcgccgctttgaagaatagtccctacatttcattaaaagtttttaaaatcctcacattttatccccgttaa 17075319  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| || ||  ||||||||||||||||||||||||||||||||||||||    
T  17075320 caaaattagt-ccttgccgttaattctttaacggaatgctgatgtggcagttagtg 17075374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 299 - 454
Target Start/End: Complemental strand, 17075706 - 17075552
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| | ||     
T  17075706 gttaaatatctttttagtccttacattttgcgcctctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatctccactat 17075607  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| || || | |||||||| ||||||||||||||| ||||||||||||    
T  17075606 caaaattagt-ccttgctattaattctctaacggaatgctgatatggcagttagtg 17075552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 18152757 - 18152911
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||| ||| |||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||  |||     
T  18152757 gttaaatatgttttcagttcttacattttgcgcccctttgaagaatagtccctacattttgttaaatgttcttaaaatcctcacattttatctccgttat 18152856  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||||||| |  ||| |||||||||| |||||||||||||||||| |||||||||    
T  18152857 caaaattag-cttctgttgttaattctctaacggaatgctgatgtgacagttagtg 18152911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 32092229 - 32092383
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| | | | |||     
T  32092229 gttaaatatgtttttagtccttacattttgcgcctctttgaagaatagtccctgcatttcattaaatgtttttaaaatcctcacattttgtgtttgttat 32092328  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| |  || |||||||||| ||||||||| ||||||||||||||||||    
T  32092329 caaaattagt-ctttgttgttaattctataacggaatactgatgtggcagttagtg 32092383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 293 - 454
Target Start/End: Complemental strand, 5029848 - 5029689
Alignment:
Q  293 ataaaagttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    |||| |||||||||||||||||||| |||||||||||| | |||||||||||| |||||| |||| ||||||||||||| ||||||||||||||||||||    
T  5029848 ataagagttaaatatatttttagtcgttacattttgcgtctctttgaagaatagtccctatatttcattaaatgttttt-aaatcctcacattttatctc 5029750  T
Q  393 tattaacaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
       || |||||||||| || || |||||||| | |||| |||||||||||||||||||||||    
T  5029749 cgctatcaaaattagt-ccatgttgttaattatctaacagaatgctgatgtggcagttagtg 5029689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 309 - 454
Target Start/End: Complemental strand, 22948957 - 22948813
Alignment:
Q  309 tttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagt 408  Q
    |||||||||||||||||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||  ||| ||||||||||    
T  22948957 tttttagtccttacattttgcgaccctttgaagaatagtctctacatttcattaaatgtttttaaaatcctcacattttatctccgttatcaaaattagt 22948858  T
Q  409 cccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
     | ||  ||||||| || |||||||||  |||||||||||||||||    
T  22948857 -ctctattgttaatgctctaacggaatattgatgtggcagttagtg 22948813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 300 - 453
Target Start/End: Original strand, 11974666 - 11974818
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaac 399  Q
    ||||||||  |||||||||||||||||||||| |||||||| |||| ||  ||||||| |||||||||||||||||||||||||||||||||   ||| |    
T  11974666 ttaaatatgattttagtccttacattttgcgctcctttgaaaaatagtctgtacatttcattaaatgtttttaaaatcctcacattttatcttcgttatc 11974765  T
Q  400 aaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagt 453  Q
    ||||||||| |  || |||||||||| |||||||||||| ||||||||||||||    
T  11974766 aaaattagt-ctttgttgttaattctctaacggaatgcttatgtggcagttagt 11974818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 306 - 412
Target Start/End: Complemental strand, 42750200 - 42750094
Alignment:
Q  306 atatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaatt 405  Q
    |||||||||||| ||||||||| ||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||  |||  ||||||    
T  42750200 atatttttagtctttacattttacgcccctttgaagaatagtccctacatttcattaaacgtttttaaaatcctcacattttatctccgttattaaaatt 42750101  T
Q  406 agtcccc 412  Q
    |||||||    
T  42750100 agtcccc 42750094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 298 - 447
Target Start/End: Complemental strand, 44803722 - 44803574
Alignment:
Q  298 agttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctatta 397  Q
    |||||||||| |||||||||||||||||||||||  |||| ||||||| || |||||||| |||||||||||||||||| |||||||||||||||  |||    
T  44803722 agttaaatatgtttttagtccttacattttgcgcttctttaaagaatagtctctacatttcattaaatgtttttaaaattctcacattttatctccgtta 44803623  T
Q  398 acaaaattagtcccctgatgttaattctttaacggaatgctgatgtggca 447  Q
     |||||||||| || || || | ||| | |||||||||| ||||||||||    
T  44803622 tcaaaattagt-ccatgctgatcattttctaacggaatgttgatgtggca 44803574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 28838356 - 28838507
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||| |||||||||| | || |||||||||   |||| |||||| ||||||||||||||||||||||||||||||||||  |||     
T  28838356 gttaaatatgtttttagtctttacattttgtgtcc-tttgaagaag--tcccgacatttcattaaatgtttttaaaatcctcacattttatctccgttat 28838452  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| |  || |||||||||| ||||| ||||||||||||||||||||||    
T  28838453 caaaattagt-cattggtgttaattctctaacgaaatgctgatgtggcagttagtg 28838507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 20543912 - 20544066
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||| | ||||||||||| |||||||||||||||| ||||||||||| ||||||| ||||||||||||||| ||||||||||  |||     
T  20543912 gttaaatatgtttttaattcttacattttgtgcccctttgaagaatagtccctacatttcattaaatttttttaaaatcctcatattttatctccgttat 20544011  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||||||||   ||| |||||||||| |||||  ||| |||||||  ||||||||    
T  20544012 caaaattagt-ttctgctgttaattctctaacgagatggtgatgtgatagttagtg 20544066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 299 - 406
Target Start/End: Original strand, 28854678 - 28854785
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||| |||||| ||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  |||     
T  28854678 gttaaatatgtttttaatccttatattttgcgcccatttaaagaatactccctacattttattaaatgtttttaaaatcctcacattttatttcagttat 28854777  T
Q  399 caaaatta 406  Q
    ||||||||    
T  28854778 caaaatta 28854785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 299 - 451
Target Start/End: Complemental strand, 10466868 - 10466717
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||| || |||||||||||| |  ||||||||||| || ||| |||||||||||||||||||||||| |||||||||||||| ||||     
T  10466868 gttaaatatgtttttaatctttacattttgcgtctatttgaagaatagtctctatattttattaaatgtttttaaaatcgtcacattttatctccattat 10466769  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagtta 451  Q
    ||||||||||    || | |||||||| |||||||||| ||||||| ||||||    
T  10466768 caaaattagt-ttatgctattaattctctaacggaatgttgatgtgacagtta 10466717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 299 - 451
Target Start/End: Complemental strand, 23549096 - 23548945
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    |||||||||||||||| | |||||||||||||||| ||||||||||| || ||| |||| ||||||| ||||| ||||||||| ||||||| ||  |||     
T  23549096 gttaaatatatttttatttcttacattttgcgcccttttgaagaatactctctatatttcattaaatctttttgaaatcctcaaattttatttccgttat 23548997  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagtta 451  Q
    |||||||||| | |||  ||||||  |||| ||||||||||||||||||||||    
T  23548996 caaaattagt-cactggcgttaatattttagcggaatgctgatgtggcagtta 23548945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 299 - 436
Target Start/End: Original strand, 28852694 - 28852830
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||| ||||||||||||| | || ||| || |||| ||||||||||| |||||||||||||||||||||||||||||||| |  |||     
T  28852694 gttaaatatgtttttaatccttacattttgtgtccatttaaataatactccctacatttcattaaatgtttttaaaatcctcacattttatccccgttat 28852793  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatg 436  Q
    ||||||||| || ||| |||||||||| ||| ||||||    
T  28852794 caaaattag-cctctgttgttaattctctaagggaatg 28852830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 300 - 454
Target Start/End: Complemental strand, 20544398 - 20544246
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaac 399  Q
    |||||||| ||||||||||||| ||||||| ||  ||||||||||| ||| ||||||| |||||||||||||||||| ||||||||||||||   ||| |    
T  20544398 ttaaatatgtttttagtccttatattttgcacctttttgaagaatagtccttacatttcattaaatgtttttaaaat-ctcacattttatcttcgttatc 20544300  T
Q  400 aaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||| ||| |  || | |||||||| ||||| |||| |||||||||||||||||    
T  20544299 aaaatcagt-cgttgctattaattctctaacgtaatgttgatgtggcagttagtg 20544246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 30938597 - 30938673
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaat 376  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||| ||| ||||||||||||||||||||||||||    
T  30938597 ttaaatatgtttttagtccttacattttgcgcctctttaaagaataatccatacattttattaaatgtttttaaaat 30938673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 361 - 452
Target Start/End: Original strand, 23548670 - 23548760
Alignment:
Q  361 taaatgtttttaaaatcctcacattttatctctattaacaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttag 452  Q
    |||||||||||||||| |||||||||||||||| ||| |||||||||| |  || |||||||||| ||||||||||||||||||||||||||    
T  23548670 taaatgtttttaaaatactcacattttatctctgttatcaaaattagt-ctttgttgttaattctctaacggaatgctgatgtggcagttag 23548760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 409
Target Start/End: Complemental strand, 32092618 - 32092508
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||||| ||||||||||| ||  ||| ||||  |  ||||||||||| ||||||||||||||||||||||||||||||||||  |||     
T  32092618 gttaaatatgtttttagttcttacattttgtgcttcttcgaagtttcgtccctacatttcattaaatgtttttaaaatcctcacattttatctccgttat 32092519  T
Q  399 caaaattagtc 409  Q
    |||||||||||    
T  32092518 caaaattagtc 32092508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 300 - 409
Target Start/End: Complemental strand, 11975150 - 11975042
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaac 399  Q
    ||||||||||||||| ||||||||||| | || |||||||| |||| ||  ||| ||||||||||||||||||||||||||||||||||| ||  ||| |    
T  11975150 ttaaatatatttttaatccttacattt-gtgctcctttgaaaaatagtctttacgttttattaaatgtttttaaaatcctcacattttatttccgttatc 11975052  T
Q  400 aaaattagtc 409  Q
    ||||||||||    
T  11975051 aaaattagtc 11975042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 303 - 391
Target Start/End: Complemental strand, 6621200 - 6621113
Alignment:
Q  303 aatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatct 391  Q
    ||||| |||||| | ||||||||||| | |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||    
T  6621200 aatatgtttttaattcttacattttgtgaccctttgaagaatagtccctacatttcattaaatg-ttttaaaatcctcacattttatct 6621113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 299 - 411
Target Start/End: Complemental strand, 12933150 - 12933038
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||||||| ||||||||| |  |||||||  |||| |||||| |||| | ||||||||| ||||||||||||||||||| ||| |||     
T  12933150 gttaaatatgtttttagtccctacattttgtgttcctttgataaatagtccctatatttaagtaaatgtttctaaaatcctcacattttatatctgttac 12933051  T
Q  399 caaaattagtccc 411  Q
    |||| ||||||||    
T  12933050 caaatttagtccc 12933038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 303 - 454
Target Start/End: Complemental strand, 49053966 - 49053815
Alignment:
Q  303 aatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctct-attaacaa 401  Q
    ||||| ||||| |||||||||||||  | | ||||||| |||| ||||||||||| |||||| ||||||||||||||||| |||||| | | |||| |||    
T  49053966 aatatgtttttcgtccttacattttaagtctctttgaaaaataatccctacatttcattaaaagtttttaaaatcctcacgttttatttttcattatcaa 49053867  T
Q  402 aattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||||| |  || | ||||| || |||||||||| |||||||||| ||||||    
T  49053866 aattagt-ctatgctattaatgctctaacggaatgttgatgtggcaattagtg 49053815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 392
Target Start/End: Original strand, 12908392 - 12908475
Alignment:
Q  309 tttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    |||||||||| |||||||| ||| | |||||  |||| ||||||||||| | ||||||||||||||||||||||||||||||||    
T  12908392 tttttagtccctacattttacgctcatttgataaataatccctacatttaactaaatgtttttaaaatcctcacattttatctc 12908475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 27310048 - 27310136
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| |||||| ||| |||||||| ||||| || |||||||  ||||||||||| ||||||||||||||||||||  |||||||    
T  27310048 gttaaatatgtttttattccctacattttacgccctttcgaagaatggtccctacatttcattaaatgtttttaaaatccctacatttt 27310136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 316 - 376
Target Start/End: Complemental strand, 27311120 - 27311060
Alignment:
Q  316 tccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaat 376  Q
    ||||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||||||||    
T  27311120 tccttacattttgcgcctctttaaagaatagtccctacatttcattaaatgtttttaaaat 27311060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 30939653 - 30939565
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| |||||||||| |||||||| ||||  || |||||||| ||||||||||| ||||||| ||||||||||||  |||||||    
T  30939653 gttaaatatgtttttagtccctacattttacgccatttcgaagaatagtccctacatttcattaaatatttttaaaatccctacatttt 30939565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 380
Target Start/End: Original strand, 11992714 - 11992796
Alignment:
Q  298 agttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctc 380  Q
    |||||||||| |||||| || ||| |||||||||  |||| ||||||  ||||||||||||||| ||||||||||||||||||    
T  11992714 agttaaatatgtttttaatctttatattttgcgcatctttaaagaattgtccctacattttatttaatgtttttaaaatcctc 11992796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 16755721 - 16755629
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| |||||| |||| | |||||||||| |||||||||||| || ||| |||| ||||||| ||||||||||||||| ||||| ||||    
T  16755721 gttaaatatgtttttaatcct-atattttgcgccactttgaagaatagtctctatatttcattaaatatttttaaaatcctcatattttttctc 16755629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 299 - 363
Target Start/End: Original strand, 23548055 - 23548119
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaa 363  Q
    ||||||||| ||||||||||||| |||||||||  |||||||||||| ||||||||||| |||||    
T  23548055 gttaaatatgtttttagtccttatattttgcgcttctttgaagaataatccctacatttcattaa 23548119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 354 - 454
Target Start/End: Original strand, 44803382 - 44803481
Alignment:
Q  354 attttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagt 453  Q
    |||||||||||| ||||||||||||| | |||||||||||  || |||||||||| | ||| |||||||||| ||||| |||| ||||||| ||| ||||    
T  44803382 attttattaaatatttttaaaatccttatattttatctctgctatcaaaattagt-ctctgttgttaattctctaacgaaatgttgatgtgacagctagt 44803480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 18443697 - 18443619
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcc 378  Q
    ||||||||| ||||| |||||||||||||||||   ||||| ||||| ||||||||||| | ||||||||||||||||||    
T  18443697 gttaaatatgtttttggtccttacattttgcgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatcc 18443619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 4152721 - 4152809
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| |||||||| | |||| ||| |||   ||| ||||||| ||||||||||||||| ||||||||||||||||  |||||||    
T  4152721 gttaaatatgtttttagttcctacagtttacgcaattttaaagaataatccctacattttattgaatgtttttaaaatccctacatttt 4152809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 444
Target Start/End: Original strand, 49053514 - 49053625
Alignment:
Q  330 gcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtcccctgatgttaattctttaa 429  Q
    |||| ||||||||||| | | ||||||||||||  | |||||||||| |||| |||||||||   ||| |||||||||||   || |||||||||| |||    
T  49053514 gcccatttgaagaatagtacatacattttattattt-tttttaaaattctcatattttatcttcgttatcaaaattagtca--tgttgttaattctctaa 49053610  T
Q  430 cggaatgctgatgtg 444  Q
    |||||||||||||||    
T  49053611 cggaatgctgatgtg 49053625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 377
Target Start/End: Original strand, 28838526 - 28838604
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatc 377  Q
    ||||||||| ||||| |||| ||||||||||  |  |||||| |||| ||| ||||||||| |||||||||||||||||    
T  28838526 gttaaatatgtttttggtccctacattttgcatcattttgaaaaataatccttacattttaataaatgtttttaaaatc 28838604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 1244531 - 1244439
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| ||||||||||||   ||||| ||||| ||||||||||| | | ||||||||||||||||  ||||||| ||||    
T  1244531 gttaaatatgtttttggtccctacattttgcgcgattttga-gaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctc 1244439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 392
Target Start/End: Original strand, 28898030 - 28898122
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| ||||||||||||   ||||| ||||| ||||||||||| | | ||||||||||||||||  ||||||| ||||    
T  28898030 gttaaatatgtttttggtccctacattttgcgcgattttga-gaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctc 28898122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 41298764 - 41298672
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| ||||||||||||   ||||| ||||| ||||||||||| | | ||||||||||||||||  ||||||| ||||    
T  41298764 gttaaatatgtttttggtccctacattttgcgcgattttga-gaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctc 41298672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 22954047 - 22954134
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| |||||||||| || |||||  ||   ||||| ||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  22954047 gttaaatatgtttttagtccctatattttatgcaattttga-gaatagtccctacattttaataaatgtttttaaaatccctacatttt 22954134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 454
Target Start/End: Complemental strand, 6621061 - 6621022
Alignment:
Q  415 atgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  6621061 atgttaattctctaactgaatgctgatgtggcagttagtg 6621022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 376
Target Start/End: Original strand, 29783936 - 29784012
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaat 376  Q
    ||||||||| |||||||||| ||||||||| ||   ||||| ||||| |||||| |||| | ||||||||||||||||    
T  29783936 gttaaatatgtttttagtccctacattttgtgcgattttga-gaatagtccctatatttcaataaatgtttttaaaat 29784012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 18443177 - 18443264
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||||| |   ||||| ||||| ||| ||||||| | ||||||||||||||||||  |||||||    
T  18443177 gttaaatatgtttttggtccctacattttgcacgattttga-gaatagtccttacatttcaataaatgtttttaaaatccctacatttt 18443264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 3e-49; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 299 - 454
Target Start/End: Complemental strand, 3591426 - 3591272
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||     
T  3591426 gttaaatatatttttagtccttacattttgcgctcatttgaagaatagtccatacattttattaaatgtttttaaaatcctcacattttatctccattat 3591327  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
     ||||||||| ||||| ||| |||| | ||||||||| ||||||||||||||||||    
T  3591326 aaaaattagt-ccctgctgtaaattatctaacggaatcctgatgtggcagttagtg 3591272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 299 - 455
Target Start/End: Complemental strand, 9880879 - 9880724
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||| | |||||||||||||| | ||||||||||| |  ||| ||||||||||||||||||||||| |||||||||||||||| |||     
T  9880879 gttaaatatgtttttaattcttacattttgcgctcatttgaagaatagtttctatattttattaaatgtttttaaaattctcacattttatctctgttat 9880780  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtga 455  Q
    |||||||||| ||||| |||||||||| |||||||||||||||||  ||||||||||    
T  9880779 caaaattagt-ccctgctgttaattctctaacggaatgctgatgtaacagttagtga 9880724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 309 - 453
Target Start/End: Original strand, 47541529 - 47541672
Alignment:
Q  309 tttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagt 408  Q
    |||||||||||||||||||  | |||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||| |  |||| |||||||| |    
T  47541529 tttttagtccttacattttatgtccctttgaagaatagtccctatatttcattaaatgtttttaaaatcctcacattttatattcattatcaaaattaat 47541628  T
Q  409 cccctgatgttaattctttaacggaatgctgatgtggcagttagt 453  Q
     ||||| |||||||||| |||||||||||||||||||||||||||    
T  47541629 -ccctgttgttaattctctaacggaatgctgatgtggcagttagt 47541672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 298 - 455
Target Start/End: Complemental strand, 48155369 - 48155213
Alignment:
Q  298 agttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctatta 397  Q
    |||||||||| |||||| |||||| ||||||||| ||||||||||||  | |||| |||| ||||||||||||||||||| ||||||||||||| | |||    
T  48155369 agttaaatatgtttttaatccttatattttgcgctcctttgaagaattgttcctatatttcattaaatgtttttaaaatcttcacattttatctatgtta 48155270  T
Q  398 acaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtga 455  Q
     |||||||||| || || |||||||||||||||||||||||||| || ||||||||||    
T  48155269 tcaaaattagt-ccttgttgttaattctttaacggaatgctgatttgacagttagtga 48155213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 299 - 451
Target Start/End: Original strand, 19895401 - 19895552
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||||||||||||||||  || | ||||||||||| ||| ||||||| ||||||||||||||||| ||||||||||||||||  |||     
T  19895401 gttaaatatgtttttagtccttacattttatgctcgtttgaagaatagtccatacatttaattaaatgtttttaaaaccctcacattttatctccgttat 19895500  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagtta 451  Q
    |||||||||| |  |  ||||||||||||||||||||||||||||||||||||    
T  19895501 caaaattagt-ctatactgttaattctttaacggaatgctgatgtggcagtta 19895552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 299 - 451
Target Start/End: Complemental strand, 50359528 - 50359377
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||| || |||||||||||||||||| ||||||||||| ||| |  |||| ||||||||||||||||||||||||||||||||||| |||     
T  50359528 gttaaatatgtttatattccttacattttgcgcccatttgaagaatagtccttttatttcattaaatgtttttaaaatcctcacattttatctctgttat 50359429  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagtta 451  Q
    |||||||||| | ||| | |||  |||||||||||||||||||||||||||||    
T  50359428 caaaattagt-ctctgcttttatgtctttaacggaatgctgatgtggcagtta 50359377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 5683162 - 5683316
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||| ||||||||||||||| | ||||||| |||| ||||||||||| ||||||||| |||||||||||||||||||||||  ||||     
T  5683162 gttaaatatgtttttaatccttacattttgcgtctctttgaaaaatagtccctacatttcattaaatgtatttaaaatcctcacattttatcttcattat 5683261  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| ||||| ||||| |||| |||| |||||||||| || |||||||||    
T  5683262 caaaattagt-ccctgctgttatttctctaacagaatgctgatatgacagttagtg 5683316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 288 - 454
Target Start/End: Complemental strand, 4288535 - 4288375
Alignment:
Q  288 aaaatataaaagttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    |||||||||  ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||     |||||||||||||||||||||||||||||    
T  4288535 aaaatataatggttaaatatgtttttagtccttatattttgcgcccctttgaagaatagtccctac-----attaaatgtttttaaaatcctcacatttt 4288441  T
Q  388 atctctattaacaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    || |   ||| |||||||| | || || ||||||||||||||||||||| ||||||| |||||||||    
T  4288440 atattcgttatcaaaattaat-ccatgctgttaattctttaacggaatgttgatgtgtcagttagtg 4288375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 299 - 451
Target Start/End: Complemental strand, 18180367 - 18180216
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||| || ||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||  |||     
T  18180367 gttaaatatgtttttaatctttatattttgcgccactttgaagaatagtccatacattttattaaatgtttttaaaatcctcatattttatctccgttat 18180268  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagtta 451  Q
    |||||||||| |  || |||||||||| ||||||||||||||| || ||||||    
T  18180267 caaaattagt-cagtggtgttaattctctaacggaatgctgatatgtcagtta 18180216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 300 - 454
Target Start/End: Original strand, 6751049 - 6751202
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaac 399  Q
    |||||||| | ||||||| |||||||||| ||| |||||||||||| ||| || |||| |||||||||||| |||||| || |||||||||||  ||| |    
T  6751049 ttaaatatgtgtttagtctttacattttgtgcctctttgaagaataatccttatatttcattaaatgttttaaaaatcatcgcattttatctccgttatc 6751148  T
Q  400 aaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||||||||||| |||||||||||| |||| |||||||||| ||||||||||||    
T  6751149 aaaattagtcccc-gatgttaattctctaacagaatgctgatatggcagttagtg 6751202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 299 - 455
Target Start/End: Original strand, 9880485 - 9880640
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||||||||||||||||||  |||||||||||| | || |||||||| |||||||||||||||||||||||||||||||||   |||     
T  9880485 gttaaatatgtttttagtccttacattttgcatccctttgaagaaaagtctctacatttcattaaatgtttttaaaatcctcacattttatcttcgttat 9880584  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtga 455  Q
    |||||||||| | ||| |||||||||| |    ||||||||||||||| ||||||||    
T  9880585 caaaattagt-cactgttgttaattctatgtatgaatgctgatgtggcggttagtga 9880640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 299 - 451
Target Start/End: Complemental strand, 31436472 - 31436321
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    |||||||||  ||||||||||||||||||| | || ||||||||||| || ||| |||||||||||||||||||||||  ||||||||||||||  |||     
T  31436472 gttaaatatgattttagtccttacattttgtgtccttttgaagaatagtcactatattttattaaatgtttttaaaattatcacattttatctccgttat 31436373  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagtta 451  Q
    |||||||||| | ||| |||||||||| |||||||||| ||||||| ||||||    
T  31436372 caaaattagt-ctctgctgttaattctctaacggaatgatgatgtgacagtta 31436321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 299 - 450
Target Start/End: Original strand, 50359126 - 50359275
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||||||| ||||||||||  || |||||||| ||||||||||| ||||||||||||| ||||| ||||||||||| ||  |||     
T  50359126 gttaaatatttttttagtccttatattttgcgccaattcgaagaatagtccctacatttcattaaatgttttttaaatcttcacattttatttccgttat 50359225  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagtt 450  Q
    |||||||||  | ||| |||||||||| |||||||||| |||||||||||||    
T  50359226 caaaattag--ctctgctgttaattctctaacggaatgttgatgtggcagtt 50359275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 299 - 455
Target Start/End: Complemental strand, 6751443 - 6751287
Alignment:
Q  299 gttaaatatatttttagtccttacattttg-cgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctatta 397  Q
    ||||||||| ||||||||| |||||||||| || |||||| ||||| | ||| ||||||| ||||||| ||||||||||||||||||||||||| | |||    
T  6751443 gttaaatatgtttttagtcattacattttggcgtccctttaaagaaaagtccttacatttcattaaatttttttaaaatcctcacattttatctttgtta 6751344  T
Q  398 acaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtga 455  Q
     |||||||||| | ||| |||||||||| ||| |||||| ||||||| ||||||||||    
T  6751343 tcaaaattagt-ctctgctgttaattctctaatggaatgttgatgtgacagttagtga 6751287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 18179880 - 18180034
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    |||||| || ||||||||||||||||||||| |||||||||| |||| ||| || |||| ||||| ||||||||||||||||||||||||||||  |||     
T  18179880 gttaaacatgtttttagtccttacattttgcacccctttgaaaaatagtccttatatttcattaattgtttttaaaatcctcacattttatctccgttat 18179979  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| | ||  || ||||| | |||||||||||||||||| || ||||||    
T  18179980 caaaattagt-ctctactgctaattttctaacggaatgctgatgtgacaattagtg 18180034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 300 - 406
Target Start/End: Original strand, 19976166 - 19976272
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaac 399  Q
    |||||||| ||||||||| |||||||||||||  |||||||||||| | | ||  |||||||||||||||||||||||| |||||||||||||||||| |    
T  19976166 ttaaatatgtttttagtcgttacattttgcgcttctttgaagaatagttcttattttttattaaatgtttttaaaatccccacattttatctctattatc 19976265  T
Q  400 aaaatta 406  Q
    |||||||    
T  19976266 aaaatta 19976272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 299 - 444
Target Start/End: Original strand, 5172746 - 5172890
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||||| |||||||||||||| | ||||||||||| || |||||||| ||||||||||||||||||||| |||||||||||   |||     
T  5172746 gttaaatatgtttttagttcttacattttgcgctcatttgaagaatagtctctacatttcattaaatgtttttaaaatccttacattttatctacgttat 5172845  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtg 444  Q
    |||| ||||| || || |||||||||| |||  ||||| |||||||    
T  5172846 caaatttagt-ccttgttgttaattctctaatagaatgttgatgtg 5172890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 454
Target Start/End: Complemental strand, 5683650 - 5683496
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||||||| ||||| || |  ||||||||||| ||||||||||| ||||||| ||||||||||||||  ||||||||||   ||     
T  5683650 gttaaatatgtttttagtccttatattttacgtctttttgaagaatagtccctacatttcattaaatatttttaaaatcctcgtattttatctccggtat 5683551  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| | ||| |||||||| | |||||||||| | ||||| |||||||||    
T  5683550 caaaattagt-cactgctgttaattttctaacggaatgttaatgtgacagttagtg 5683496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 454
Target Start/End: Original strand, 48154961 - 48155128
Alignment:
Q  285 tgtaaaatataaaagttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacat 384  Q
    |||| |||||||  ||||||||| |||||| |||||| ||||| |||| |||| ||||||| ||| ||||||||||||||||||||||||||||||| ||    
T  48154961 tgtataatataatggttaaatatgtttttaatccttatattttacgccgcttt-aagaatagtccttacattttattaaatgtttttaaaatcctcatat 48155059  T
Q  385 tttatctctattaacaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||||||   || |||||||| | | ||| | |||| ||| ||||||| || ||||||| |||||||||    
T  48155060 tttatctccgatatcaaaattaat-ctctgctcttaagtctgtaacggattgttgatgtgacagttagtg 48155128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 1501070 - 1500982
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| |||||||||| || ||||||||| | ||||||||||| ||||||||||| ||||||||||||||||||||  |||||||    
T  1501070 gttaaatatgtttttagtccctatattttgcgctcttttgaagaatagtccctacatttcattaaatgtttttaaaatccctacatttt 1500982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 45664688 - 45664776
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| |||||||||| |||||||| ||| | ||||||||||| || |||||||||| |||||||||||||||||| ||||||||    
T  45664688 gttaaatatgtttttagtccctacattttacgctcatttgaagaatagtctctacattttaataaatgtttttaaaatccccacatttt 45664776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 454
Target Start/End: Complemental strand, 19895853 - 19895735
Alignment:
Q  335 tttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtcccctgatgttaattctttaacggaa 434  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||| |||||||||   ||| |||||||||| |  || |||||||||| |||| |||    
T  19895853 tttgaagaatagtctctacattttattaaatgtttttaaaattctcatattttatcttcgttatcaaaattagt-ctttgttgttaattctctaacagaa 19895755  T
Q  435 tgctgatgtggcagttagtg 454  Q
    || ||||||| |||||||||    
T  19895754 tgttgatgtgacagttagtg 19895735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 451
Target Start/End: Complemental strand, 42723348 - 42723193
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattt----tattaaatgtttttaaaatcctcacattttatctcta 394  Q
    ||||||||| |||||| |||||| ||||||||| ||||| ||||||| | | || ||||    |||||||||||||||||||||||||||||||| ||      
T  42723348 gttaaatatgtttttaatccttatattttgcgctcctttaaagaataattcatatatttaatttattaaatgtttttaaaatcctcacattttatatccg 42723249  T
Q  395 ttaacaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagtta 451  Q
    ||| ||||||||||    || |||||||| | ||| |||||||||||||||||||||    
T  42723248 ttagcaaaattagt-ttatgttgttaattatctaatggaatgctgatgtggcagtta 42723193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 361 - 446
Target Start/End: Complemental strand, 47541851 - 47541767
Alignment:
Q  361 taaatgtttttaaaatcctcacattttatctctattaacaaaattagtcccctgatgttaattctttaacggaatgctgatgtggc 446  Q
    ||||||||||||||||||||||||||||||||  ||| |||||||||| || || |||||||| || ||||||||| |||||||||    
T  47541851 taaatgtttttaaaatcctcacattttatctccgttatcaaaattagt-ccttgttgttaattattaaacggaatgttgatgtggc 47541767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 36793663 - 36793575
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| |||||||||| || ||||||||   |||||||||||| || |||||||||| ||||||||||||||||||  |||||||    
T  36793663 gttaaatatgtttttagtccctatattttgcgtgactttgaagaatagtctctacattttaataaatgtttttaaaatccctacatttt 36793575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 40124595 - 40124508
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||||||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  40124595 gttaaatatatttttggtccctacattttacgcgattttga-gaataatccctacatttcaataaatgtttttaaaatccctacatttt 40124508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 12869743 - 12869664
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcc 378  Q
    ||||||||| ||||| |||| || ||||| | | ||||| ||||||| ||||||||||| | ||||||||||||||||||    
T  12869743 gttaaatatgtttttggtccctatattttaccctcctttaaagaatagtccctacatttcaataaatgtttttaaaatcc 12869664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 389
Target Start/End: Complemental strand, 37717884 - 37717795
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttat 389  Q
    ||||||||| |||||||||| |||||||| |||  ||||||| |||| ||| ||||||| | |||| |||||||||||||| || ||||||    
T  37717884 gttaaatatgtttttagtccctacattttacgcaactttgaa-aatagtccttacatttcaataaaggtttttaaaatccttactttttat 37717795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 392
Target Start/End: Original strand, 17968038 - 17968130
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| ||||||||||||   ||||| ||||| ||||||||||| | | ||||||||||||||||  ||||||| ||||    
T  17968038 gttaaatatgtttttggtccctacattttgcgcgattttga-gaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctc 17968130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 47410942 - 47410850
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  ||||||| ||||    
T  47410942 gttaaatatgtttttggtccctacattttacgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatccctacattttttctc 47410850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 32266484 - 32266571
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  32266484 gttaaatatgtttttggtccctacattttacgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatccctacatttt 32266571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 32267002 - 32266915
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  32267002 gttaaatatgtttttggtccctacattttacgcgattttga-gaataatccctacatttcaataaatgtttttaaaatccctacatttt 32266915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 3591253 - 3591174
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcc 378  Q
    ||||||||| ||||| |||| |||||| ||||   ||||||| |||| ||| ||||||| | ||||||||||||||||||    
T  3591253 gttaaatatgtttttggtccctacattgtgcgtgactttgaaaaatagtccttacatttcaataaatgtttttaaaatcc 3591174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 45230649 - 45230571
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcc 378  Q
    ||||||||| ||||| |||| ||||||||||||   ||||| ||||| ||||||||||| | | ||||||||||||||||    
T  45230649 gttaaatatgtttttggtccctacattttgcgcgattttga-gaatagtccctacatttcaatgaatgtttttaaaatcc 45230571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 30428193 - 30428101
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| ||||||||||||   ||||| ||||| | ||||||||| | | ||||||||||||||||  ||||||| ||||    
T  30428193 gttaaatatgtttttggtccctacattttgcgcgattttga-gaatagttcctacatttcaatgaatgtttttaaaatccctacattttttctc 30428101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 387
Target Start/End: Complemental strand, 46802799 - 46802754
Alignment:
Q  342 aatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    |||| ||||||||||||| ||||||||||||||||||  |||||||    
T  46802799 aatagtccctacattttaataaatgtttttaaaatccctacatttt 46802754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 7e-47; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 43933441 - 43933595
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||   |||     
T  43933441 gttaaatatatttttagtccttacattttgtgcccgtttgaagaatagtccctacatttcattaaatatttttaaaatcctcacattttatcttcgttat 43933540  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| ||||| |||||||||| ||| |||||||||||||| |||||||||    
T  43933541 caaaattagt-ccctgttgttaattctataatggaatgctgatgtgacagttagtg 43933595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 299 - 455
Target Start/End: Complemental strand, 13637869 - 13637714
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||||||||||||||  |||     
T  13637869 gttaaatatgtttctagtccttacattttgcgcccctttgaagaatagtctctacatttcattaaatatttttaaaatcctcacattttatctccgttat 13637770  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtga 455  Q
    ||||| |||| || || ||||||||||||||| |||||||||||| |||||||||||    
T  13637769 caaaactagt-ccttgttgttaattctttaacagaatgctgatgtagcagttagtga 13637714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 287 - 454
Target Start/End: Original strand, 9217810 - 9217975
Alignment:
Q  287 taaaatataaaagttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattt 386  Q
    ||||||||||| |||||||||  ||||||||| || |||||||||  |||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  9217810 taaaatataaa-gttaaatatcgttttagtccatatattttgcgctgctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattt 9217908  T
Q  387 tatctctattaacaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||||  |||  ||||||||| | ||| ||||||||||||||||||| | |||||||||||||||||    
T  9217909 tatctccgttattaaaattagt-cactgttgttaattctttaacggaacgttgatgtggcagttagtg 9217975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 299 - 444
Target Start/End: Original strand, 22814297 - 22814441
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||| | |||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||   |||     
T  22814297 gttaaatatgtttttaattcttacattttgcgcccctttgaagaatagtccatacatttcattaaatgtttttaaaatcctcacattttatcttcgttat 22814396  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtg 444  Q
    |||||||||| ||||| | |||||| | |||||||||| |||||||    
T  22814397 caaaattagt-ccctgctattaattttctaacggaatgttgatgtg 22814441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 311 - 454
Target Start/End: Original strand, 44504105 - 44504247
Alignment:
Q  311 tttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtcc 410  Q
    |||||| ||||||||||| | || ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||  ||| |||||||||| |    
T  44504105 tttagttcttacattttgtgtccatttgaagaatagtccctacatttcattaaatatttttaaaatcctcacattttatctccgttatcaaaattagt-c 44504203  T
Q  411 cctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    | || |||||||||| |||||||||| ||||||| |||||||||    
T  44504204 catgttgttaattctctaacggaatgatgatgtgacagttagtg 44504247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 299 - 444
Target Start/End: Complemental strand, 9218602 - 9218459
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||||| |||||| |||| ||||||||||||||||||| |||||||||||||   |||     
T  9218602 gttaaatatgtttttagtcattacattttgcgctcctttgaagaatagtccctatatttcattaaatgtttttaaaatcatcacattttatcttcgttat 9218503  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtg 444  Q
    | |||||||| | ||| |||||||||| ||||||||||||||||||    
T  9218502 c-aaattagt-ctctgttgttaattctctaacggaatgctgatgtg 9218459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 299 - 452
Target Start/End: Complemental strand, 26741389 - 26741241
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||| ||  ||||||| |||    |||||||||||||||||||||||||||| |||     
T  26741389 gttaaatatgttttaagtccttacgttttgcgcccctttgaagaatagtctttacatttcatt----gtttttaaaatcctcacattttatctctgttat 26741294  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttag 452  Q
    |||||||||| |  || |||||||||| |||||||||||||||||| |||||||    
T  26741293 caaaattagt-cattgctgttaattctctaacggaatgctgatgtgccagttag 26741241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 299 - 434
Target Start/End: Complemental strand, 37172565 - 37172431
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    |||||||||||||||| ||||| | |||| || |||||||||||||| | |||||| ||||||||||||||||||||||  ||||||||||||||||||     
T  37172565 gttaaatatatttttaatccttgcgttttacgtccctttgaagaataattcctacactttattaaatgtttttaaaatctccacattttatctctattat 37172466  T
Q  399 caaaattagtcccctgatgttaattctttaacggaa 434  Q
    |||||||||| || || |||||||||| ||||||||    
T  37172465 caaaattagt-ccatgctgttaattctctaacggaa 37172431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 299 - 406
Target Start/End: Complemental strand, 44504475 - 44504368
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||| | ||||||||||||||||||||| ||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||  |||     
T  44504475 gttaaatgtgtttttagtccttacattttgcacccctttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacattttatctccgttat 44504376  T
Q  399 caaaatta 406  Q
    ||||||||    
T  44504375 caaaatta 44504368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 300 - 454
Target Start/End: Original strand, 38485699 - 38485851
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaac 399  Q
    ||||||||  ||||||||||||||||||| ||| |||||||||||| ||| |||||||||||| ||||||||||||||||  |||||| ||||  ||| |    
T  38485699 ttaaatatgattttagtccttacattttgtgcctctttgaagaatagtccatacattttattatatgtttttaaaatccttgcatttt-tctccgttatc 38485797  T
Q  400 aaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||||||| |  || ||||||||||||||||||||| |||||| ||||||||||    
T  38485798 aaaattagt-ctttgctgttaattctttaacggaatgttgatgtagcagttagtg 38485851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 444
Target Start/End: Original strand, 25770326 - 25770466
Alignment:
Q  303 aatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaa 402  Q
    ||||| ||||||||||||||||||||   |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    ||| ||||    
T  25770326 aatatgtttttagtccttacattttgtatccctttgaagaatagtccctacatttcattaaatgtttttagaatcctcacattttatcatcgttatcaaa 25770425  T
Q  403 attagtcccctgatgttaattctttaacggaatgctgatgtg 444  Q
    |||| | || || |||||||||| ||||||||||||||||||    
T  25770426 attaat-ccatgttgttaattctctaacggaatgctgatgtg 25770466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 301 - 453
Target Start/End: Original strand, 37172084 - 37172235
Alignment:
Q  301 taaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaaca 400  Q
    ||||||| |||||||||||||||||||||||   ||| ||||||| || |||||||| ||||||||||||||||||||||||| ||||||||  ||| ||    
T  37172084 taaatatttttttagtccttacattttgcgcttatttaaagaatagtctctacatttcattaaatgtttttaaaatcctcacagtttatctccgttatca 37172183  T
Q  401 aaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagt 453  Q
    |||||||||||  | ||  ||||||  ||||||||| ||||||||||||||||    
T  37172184 aaattagtcccg-gctgaaaattctccaacggaatgttgatgtggcagttagt 37172235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 302 - 441
Target Start/End: Original strand, 50732229 - 50732367
Alignment:
Q  302 aaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaa 401  Q
    |||||| |||||  |||||||||||||||| |||||||| |||| ||| ||||||| ||||||| |||||||||||||| |||||||||||  ||| |||    
T  50732229 aaatatgttttttatccttacattttgcgctcctttgaaaaatagtccatacatttcattaaatatttttaaaatcctcgcattttatctccgttatcaa 50732328  T
Q  402 aattagtcccctgatgttaattctttaacggaatgctgat 441  Q
    ||||||| ||||| |||||||||| ||| |||||||||||    
T  50732329 aattagt-ccctgctgttaattctctaatggaatgctgat 50732367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 302 - 441
Target Start/End: Complemental strand, 50780626 - 50780488
Alignment:
Q  302 aaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaa 401  Q
    |||||| |||||  |||||||||||||||| |||||||| |||| ||| ||||||| ||||||| |||||||||||||| |||||||||||  ||| |||    
T  50780626 aaatatgttttttatccttacattttgcgctcctttgaaaaatagtccatacatttcattaaatatttttaaaatcctcgcattttatctccgttatcaa 50780527  T
Q  402 aattagtcccctgatgttaattctttaacggaatgctgat 441  Q
    ||||||| ||||| |||||||||| ||| |||||||||||    
T  50780526 aattagt-ccctgctgttaattctctaatggaatgctgat 50780488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 299 - 409
Target Start/End: Original strand, 51471336 - 51471446
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| || ||||| ||||||||||||| |||||||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||  |||     
T  51471336 gttaaatatgttcttagttcttacattttgcgtccctttgaagaatagtttctacatttcattaaatgtttttaaaatcctcacattttatctccgttat 51471435  T
Q  399 caaaattagtc 409  Q
    |||||||||||    
T  51471436 caaaattagtc 51471446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 299 - 454
Target Start/End: Complemental strand, 34743559 - 34743408
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| | | ||||||||||| |||||| |||||||||||||  ||| ||||||| |||||||||||| |||||||||||||||||| | | |||     
T  34743559 gttaaatatgtatctagtccttacactttgcgtccctttgaagaattatccttacatttcattaaatgttttaaaaatcctcacattttatatatgttat 34743460  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||| | |||  |||||||||||||||||   ||||||||||||||||||    
T  34743459 caaaattagt-ctctgcggttaattctttaacgga---ctgatgtggcagttagtg 34743408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 27013414 - 27013564
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||| |||||||||| | |    ||||||||| | ||| ||||||||||||||||||||||||||| ||||||||||||  |||     
T  27013414 gttaaatatgtttttagtctttacattttgagtc----tgaagaatagttcctgcattttattaaatgtttttaaaatccttacattttatctccgttat 27013509  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    || ||||||| |  || |||||||||| ||||||||| ||||||||||||||||||    
T  27013510 cacaattagt-ctatgttgttaattctctaacggaatactgatgtggcagttagtg 27013564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 299 - 385
Target Start/End: Complemental strand, 132148 - 132062
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatt 385  Q
    ||||||||| | ||||||||||||||||||| | ||||||||||||| ||| ||||||| |||||||||||||||||||||||||||    
T  132148 gttaaatatgtatttagtccttacattttgcactcctttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacatt 132062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 299 - 408
Target Start/End: Complemental strand, 43933816 - 43933708
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||||| |||||||||| || |||||| |||| || |||| ||| ||||||||||||||||||||||| ||||||||||| |||     
T  43933816 gttaaatatgtttttagtcctcacattttgcgtccatttgaaaaatagtctctac-tttcattaaatgtttttaaaatcctcatattttatctctgttat 43933718  T
Q  399 caaaattagt 408  Q
    ||||||||||    
T  43933717 caaaattagt 43933708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 454
Target Start/End: Complemental strand, 25770809 - 25770656
Alignment:
Q  295 aaaagttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctcta 394  Q
    |||| |||||||| |||||| |||||||||||||| | | ||||||||||| | ||||||||||||||||||||||||||||  | | ||||||||||      
T  25770809 aaaatttaaatatgtttttaatccttacattttgcactcatttgaagaatagttcctacattttattaaatgtttttaaaatatttatattttatctccg 25770710  T
Q  395 ttaacaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||  ||||||||||      |||||||||| |||| |||||| ||||||||| ||||||    
T  25770709 ttataaaaattagtc-----ttgttaattctctaacagaatgc-gatgtggcaattagtg 25770656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 300 - 411
Target Start/End: Original strand, 33225490 - 33225601
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaac 399  Q
    |||||||| |||||||||  |||||||| ||| |||||||  |||| ||||||||||| | |||||||||||||||||| |||||||||| ||| ||| |    
T  33225490 ttaaatatgtttttagtctctacattttacgctcctttgataaatagtccctacatttaagtaaatgtttttaaaatccccacattttatatctgttacc 33225589  T
Q  400 aaaattagtccc 411  Q
    ||| ||||||||    
T  33225590 aaatttagtccc 33225601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 334 - 392
Target Start/End: Complemental strand, 51755968 - 51755910
Alignment:
Q  334 ctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  51755968 ctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatctc 51755910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 299 - 388
Target Start/End: Complemental strand, 48868676 - 48868587
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttta 388  Q
    ||||||||| || ||||||| ||||||||||||  ||||||| |||| ||||||||||| | ||||||||||||||||||  ||||||||    
T  48868676 gttaaatatgttattagtccctacattttgcgctactttgaataatagtccctacatttcaataaatgtttttaaaatccctacatttta 48868587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 299 - 370
Target Start/End: Complemental strand, 45728406 - 45728335
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttt 370  Q
    ||||||||| |||||||||||||||||||| | |||||||||||||| ||| ||||||| ||||||| ||||    
T  45728406 gttaaatatgtttttagtccttacattttgtgtccctttgaagaatagtccatacatttcattaaatatttt 45728335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 300 - 454
Target Start/End: Original strand, 13637478 - 13637630
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaac 399  Q
    |||||||| |||||| || |||||||||||||  ||||||| |||| ||  | ||||| ||||||| ||||||||||| ||| |||||||||   ||| |    
T  13637478 ttaaatatgtttttaatctttacattttgcgcttctttgaataatagtct-tgcatttcattaaatatttttaaaatcttcatattttatcttcgttatc 13637576  T
Q  400 aaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||||||| |  |   ||||||||| |||||||||| |||||||||||||||||    
T  13637577 aaaattagt-ctttaccgttaattctctaacggaatgttgatgtggcagttagtg 13637630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 388
Target Start/End: Original strand, 48867651 - 48867740
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttta 388  Q
    ||||||||| || ||||||| ||||||||||||  |||| || |||| ||||||||||| | ||||| ||||||||||||| ||||||||    
T  48867651 gttaaatatgttattagtccctacattttgcgctactttaaataatagtccctacatttcaataaatatttttaaaatccttacatttta 48867740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 299 - 411
Target Start/End: Complemental strand, 33227011 - 33226899
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| || ||||||| |||||||||||| |||||||  |||| |||||| |||| | |||||||||||||||||  || ||||||| |||  ||     
T  33227011 gttaaatatgttcttagtccctacattttgcgctcctttgataaatagtccctatatttaagtaaatgtttttaaaatctccaaattttatatctgctat 33226912  T
Q  399 caaaattagtccc 411  Q
    |||| ||||||||    
T  33226911 caaatttagtccc 33226899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 51508007 - 51507919
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttta 388  Q
    |||||||| ||||||||||||||||||| ||| | |||||  |||| | ||||||||| | |||||||||||||| |||| ||||||||    
T  51508007 ttaaatatgtttttagtccttacattttacgctcttttgataaatagttcctacatttaagtaaatgtttttaaagtccttacatttta 51507919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 388
Target Start/End: Original strand, 3799723 - 3799812
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttta 388  Q
    ||||||||| |||||||||| |||||||| ||| | |||||  |||| || |||||||| | ||||||||||||||||||  ||||||||    
T  3799723 gttaaatatctttttagtccctacattttacgctcttttgataaatagtctctacatttaagtaaatgtttttaaaatccctacatttta 3799812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 373
Target Start/End: Original strand, 27013580 - 27013657
Alignment:
Q  296 aaagttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaa 373  Q
    |||||||||||| ||||| ||||||||||||||||    ||||||||||| ||| ||||||||| || ||||||||||    
T  27013580 aaagttaaatatgtttttggtccttacattttgcgtgattttgaagaatagtccttacattttaatatatgtttttaa 27013657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 4199974 - 4199896
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcc 378  Q
    ||||||||| ||||| |||| ||||||||||||   ||||| ||||| ||||||||||| | ||||||||||||||||||    
T  4199974 gttaaatatgtttttggtccctacattttgcgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatcc 4199896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 374
Target Start/End: Original strand, 51505956 - 51506031
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaa 374  Q
    |||||||||||||||| ||| |||||||| ||| | |||||  |||| ||||||||||| | ||||||||||||||    
T  51505956 gttaaatatatttttaatccctacattttacgctcttttgataaatagtccctacatttaagtaaatgtttttaaa 51506031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 22407362 - 22407270
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| ||||||||||||   |||||| |||| ||||||||||| | | ||||||||||||||||  ||||||| ||||    
T  22407362 gttaaatatgtttttggtccctacattttgcgcaattttgaa-aatagtccctacatttcaatgaatgtttttaaaatccctacattttttctc 22407270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 372
Target Start/End: Complemental strand, 22814670 - 22814597
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgttttta 372  Q
    ||||||||| |||||||| |||| |||||| ||| ||||||| |||| | | ||||||| ||||||||||||||    
T  22814670 gttaaatatgtttttagtacttatattttgtgcctctttgaaaaatagttcatacatttcattaaatgttttta 22814597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 392
Target Start/End: Original strand, 34949757 - 34949849
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| ||||||||||||   ||||| ||||| ||||||||||| | | ||||||||||||||||  ||||||| ||||    
T  34949757 gttaaatatgtttttggtccctacattttgcgcgattttga-gaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctc 34949849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 392
Target Start/End: Original strand, 36899255 - 36899347
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  ||||||| ||||    
T  36899255 gttaaatatgtttttggtccctacattttacgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatccctacattttttctc 36899347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 45539728 - 45539636
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| |||||||| |||   ||| ||||||| ||||||||||| | ||||||||||||||||||  ||||||| ||||    
T  45539728 gttaaatatgtttttggtccctacattttacgcgatttt-aagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctc 45539636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 46690201 - 46690114
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  46690201 gttaaatatgtttttggtccctacattttacgcgattttga-gaataatccctacatttcaataaatgtttttaaaatccctacatttt 46690114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 387
Target Start/End: Complemental strand, 2389111 - 2389064
Alignment:
Q  340 agaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  2389111 agaatagtccctacattttaataaatgtttttaaaatccctacatttt 2389064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 378
Target Start/End: Original strand, 25770495 - 25770574
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcc 378  Q
    ||||||||| |||||| |||||||||||||||    |||||| |||| ||  ||||||| | ||||||||||||||||||    
T  25770495 gttaaatatgtttttaatccttacattttgcgtgattttgaaaaatagtctttacatttcaataaatgtttttaaaatcc 25770574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 378
Target Start/End: Original strand, 27475391 - 27475469
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcc 378  Q
    ||||||||| ||||| |||| ||||||||||||   ||||| ||||| ||||||||||| | | ||||||||||||||||    
T  27475391 gttaaatatgtttttggtccctacattttgcgcgattttga-gaatagtccctacatttcaatgaatgtttttaaaatcc 27475469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 392
Target Start/End: Original strand, 42606281 - 42606373
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||| | ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  ||||||| ||||    
T  42606281 gttaaatttgtttttggtccctacattttacgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatccctacattttttctc 42606373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 388
Target Start/End: Complemental strand, 47343814 - 47343725
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttta 388  Q
    ||||||||| |||| ||||| |||||||| ||  | |||||  |||| || |||||||| | ||||||||||||||||||  ||||||||    
T  47343814 gttaaatatcttttcagtccctacattttacgttcttttgataaatagtctctacatttaagtaaatgtttttaaaatccctacatttta 47343725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 411
Target Start/End: Original strand, 54588493 - 54588570
Alignment:
Q  334 ctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtccc 411  Q
    |||||||||||| ||| ||||||| | |||||||||||||||| |  |||||||| |||  || ||||||||| ||||    
T  54588493 ctttgaagaatagtccatacatttcaataaatgtttttaaaattcctacattttacctccgtttacaaaattaatccc 54588570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 7248578 - 7248490
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| |||||| ||| |||||||| |  |||||| || |||| |||  |||||||| ||||| ||||||||||||  |||||||    
T  7248578 gttaaatatgtttttaatccctacattttacctccctttaaaaaatagtcctcacattttaataaatatttttaaaatccctacatttt 7248490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 375
Target Start/End: Original strand, 37172255 - 37172331
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaa 375  Q
    ||||||||| ||||| ||||||||||||||||   ||||||| |||| ||| || |||| |  ||||||||||||||    
T  37172255 gttaaatatgtttttggtccttacattttgcgtgactttgaaaaataatccttagatttcaacaaatgtttttaaaa 37172331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 387
Target Start/End: Original strand, 45539249 - 45539297
Alignment:
Q  339 aagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  45539249 aagaatagtccctacatttcaataaatgtttttaaaatccctacatttt 45539297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 51588552 - 51588477
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaat 376  Q
    |||||||| || ||||||| | |||||||||    ||||||||||| ||| ||||||||| ||||||||||||||||    
T  51588552 ttaaatatgttattagtccctgcattttgcgtgattttgaagaataatcc-tacattttaataaatgtttttaaaat 51588477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 95; Significance: 3e-46; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 300 - 454
Target Start/End: Complemental strand, 108210 - 108057
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaac 399  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||  | ||||||||| ||||||||||||||||||||||||||||||||||  ||| |    
T  108210 ttaaatatgtttttagtccttacattttgcgcccttttgaagaattattcctacatttcattaaatgtttttaaaatcctcacattttatctccgttatc 108111  T
Q  400 aaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||||||| | ||| |||||||||| ||| ||||||||||||||||||||||||    
T  108110 aaaattagt-ctctgctgttaattctctaatggaatgctgatgtggcagttagtg 108057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 107723 - 107877
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||| | ||||| ||||||||||||||||||||||||||  |||     
T  107723 gttaaatatgtttttagaccttacactttgcgctcctttgaagaatagtccctacatttcaataaatatttttaaaatcctcacattttatctccgttat 107822  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||| |||| || || |||||||||| |||||||||||||||||| |||||||||    
T  107823 caaaaatagt-ccatgttgttaattctctaacggaatgctgatgtgacagttagtg 107877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 4e-45; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 299 - 446
Target Start/End: Complemental strand, 31588436 - 31588289
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcg-cccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctatta 397  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||||  |||    
T  31588436 gttaaatatgtttttagtccttacattttgcgtcccctttgaagaatagtccctacatttcattaaatatttttaaaatcctaacattttatctccgtta 31588337  T
Q  398 acaaaattagtcccctgatgttaattctttaacggaatgctgatgtggc 446  Q
     |||||||||| ||||| |||||||||| ||||||||||||||||||||    
T  31588336 tcaaaattagt-ccctgctgttaattctctaacggaatgctgatgtggc 31588289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 315 - 454
Target Start/End: Original strand, 18339090 - 18339228
Alignment:
Q  315 gtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtcccctg 414  Q
    ||||||||||||||||||||||||||||||| || ||| |||| |||||||||||||||||||||||||||||||||| || | |||||||||| || ||    
T  18339090 gtccttacattttgcgcccctttgaagaatagtctctatatttcattaaatgtttttaaaatcctcacattttatctccatcatcaaaattagt-ccatg 18339188  T
Q  415 atgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
     |||||||||| |||||||||| ||||||| |||||||||    
T  18339189 ctgttaattctctaacggaatgttgatgtgacagttagtg 18339228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 298 - 455
Target Start/End: Complemental strand, 87351 - 87195
Alignment:
Q  298 agttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctatta 397  Q
    |||||||||| ||||||||||||| |||||| | |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||  |||    
T  87351 agttaaatatgtttttagtccttatattttgtgtccctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatctccgtta 87252  T
Q  398 acaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtga 455  Q
     |||||||||| |  || |||||||||| ||||  |||| |||||||| |||||||||    
T  87251 tcaaaattagt-ctttgttgttaattctctaacataatgttgatgtggtagttagtga 87195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 303 - 454
Target Start/End: Complemental strand, 3935779 - 3935629
Alignment:
Q  303 aatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaa 402  Q
    |||||||||||||||||| |||||| ||| ||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||| | |||  |||    
T  3935779 aatatatttttagtcctttcattttacgctcctttgaagaataatccctacatttcattaattgtttttaaaatcctcacattttatctttgttattaaa 3935680  T
Q  403 attagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||| | ||| |||||||||| ||||| |||| ||||||||| |||||||    
T  3935679 attagt-ctctgctgttaattctctaacgaaatgttgatgtggcggttagtg 3935629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 299 - 455
Target Start/End: Complemental strand, 8648154 - 8647999
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    |||||||||  ||||||||||||||||||||| || || |||||||| ||  ||||||| ||||||| ||||||||||||||||||||| ||||  |||     
T  8648154 gttaaatatgattttagtccttacattttgcgtcctttggaagaatagtctttacatttcattaaatatttttaaaatcctcacattttttctccgttat 8648055  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtga 455  Q
    |||||||||| |  || ||||||||||||||||||||| ||||||||||||||||||    
T  8648054 caaaattagt-ctatgttgttaattctttaacggaatgttgatgtggcagttagtga 8647999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 299 - 454
Target Start/End: Complemental strand, 18999729 - 18999575
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||||||||||||||||||  |  ||||||||||| ||| ||||||| ||||||| ||||||||||||||||||||||||| | |||     
T  18999729 gttaaatatgtttttagtccttacattttgcttcattttgaagaatagtccatacatttcattaaatatttttaaaatcctcacattttatctttgttat 18999630  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||| | |  || |||||||||| |||||||||| |||||||||||||||||    
T  18999629 caaaattaat-cattgttgttaattctctaacggaatgatgatgtggcagttagtg 18999575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 293 - 427
Target Start/End: Complemental strand, 8750455 - 8750322
Alignment:
Q  293 ataaaagttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    |||| |||||||||| ||||||||||||||||||||||   |||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  8750455 ataagagttaaatatgtttttagtccttacattttgcgtttctttgaagaatagtccctacattttattaaatgtgtttaaaatcctcatattttatctc 8750356  T
Q  393 tattaacaaaattagtcccctgatgttaattcttt 427  Q
      ||| |||||||||| || || ||||||||||||    
T  8750355 cgttatcaaaattagt-ccatgttgttaattcttt 8750322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 298 - 445
Target Start/End: Original strand, 16284274 - 16284420
Alignment:
Q  298 agttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctatta 397  Q
    |||||||||| ||||||||||||||||||||||    ||||||||||| ||  || |||||||||||||||||||||||||||| ||||||||||  |||    
T  16284274 agttaaatatgtttttagtccttacattttgcgtttttttgaagaatagtctttatattttattaaatgtttttaaaatcctcatattttatctccgtta 16284373  T
Q  398 acaaaattagtcccctgatgttaattctttaacggaatgctgatgtgg 445  Q
     |||||||||| |  || |||||||||| |||||||||||||||||||    
T  16284374 tcaaaattagt-cattgttgttaattctctaacggaatgctgatgtgg 16284420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 299 - 444
Target Start/End: Original strand, 31176508 - 31176652
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||| | ||| ||||||| ||||||||||||||||||| ||| |||||||| |  |||     
T  31176508 gttaaatatgtttttagtccttatattttgcgtccctttgaagaacagtccatacatttcattaaatgtttttaaaatcgtcatattttatccccgttat 31176607  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtg 444  Q
    |||||||||| || || |||||| ||||||||||||| ||||||||    
T  31176608 caaaattagt-ccttgctgttaactctttaacggaatactgatgtg 31176652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 300 - 454
Target Start/End: Original strand, 13987284 - 13987438
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatg-tttttaaaatcctcacattttatctctattaa 398  Q
    |||||||| |||||||| ||||||||| |||||| ||||||||||| || ||| |||| |||||||| |||||||||| |||||||||||||||  |||     
T  13987284 ttaaatatgtttttagttcttacatttcgcgcccttttgaagaataatctctatatttcattaaatgttttttaaaattctcacattttatctccgttat 13987383  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
     ||||||||| | ||| |||||||||| |||||||||| ||||||| |||||||||    
T  13987384 taaaattagt-ctctgctgttaattctctaacggaatgatgatgtgacagttagtg 13987438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 299 - 451
Target Start/End: Complemental strand, 3406948 - 3406798
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||  ||| ||||||||||  ||||||||||| | || | |||||||||||| |||||||||| |||||||||||||||| |||     
T  3406948 gttaaatatgtttttagtt-ttatattttgcgcctttttgaagaatagttccaatattttattaaatatttttaaaattctcacattttatctctgttat 3406850  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagtta 451  Q
    |||||||||| ||||||| |||||| | |||||||||| ||||||| ||||||    
T  3406849 caaaattagt-ccctgatattaattttctaacggaatgttgatgtgacagtta 3406798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 299 - 454
Target Start/End: Complemental strand, 30415572 - 30415419
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    |||||||||  |||||||||||||||||| ||| |||| |||||||| ||||||||||| ||| ||||||||||||||||||||||||| ||||  |||     
T  30415572 gttaaatatggttttagtccttacattttacgctccttcgaagaatagtccctacatttcatt-aatgtttttaaaatcctcacattttgtctccgttat 30415474  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    |||||||||  | | | ||||||||||  |||||||||||||||||  ||||||||    
T  30415473 caaaattag-gctcagctgttaattctccaacggaatgctgatgtgatagttagtg 30415419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 409
Target Start/End: Original strand, 18999367 - 18999477
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||||||||||||||| | | ||||||||||| ||| ||||||| ||||||| |||||||||||||| |||||||||||  |||     
T  18999367 gttaaatatgtttttagtccttacattttgcactcttttgaagaatagtccatacatttcattaaatatttttaaaatcctctcattttatctccgttat 18999466  T
Q  399 caaaattagtc 409  Q
    |||||||||||    
T  18999467 caaaattagtc 18999477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 299 - 455
Target Start/End: Original strand, 35373455 - 35373604
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    |||||||||||||||||||||||||||||| | ||||||||||||      |||||||| ||||||| ||||||||||||||| |||||||| |  |||     
T  35373455 gttaaatatatttttagtccttacattttgtgtccctttgaagaa------ctacatttcattaaatatttttaaaatcctcatattttatccccgttat 35373548  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtga 455  Q
     ||||||||| | ||| |||||||||| ||||||||| ||||||| | |||||||||    
T  35373549 taaaattagt-cactgctgttaattctctaacggaatactgatgtagtagttagtga 35373604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 299 - 455
Target Start/End: Original strand, 8750011 - 8750168
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||| | ||||||||||||||||||||||| |||| ||||||||||| ||||||| ||||||||||| | || ||||||||   |||     
T  8750011 gttaaatatgtttttaattcttacattttgcgcccctttgaataataatccctacatttcattaaatatttttaaaatcgtaacgttttatcttcgttat 8750110  T
Q  399 caaaattagtcccctga-tgttaattctttaacggaatgctgatgtggcagttagtga 455  Q
    ||||||||||| |   | ||||||||||  ||| | ||||||||| ||||||||||||    
T  8750111 caaaattagtctctacactgttaattctccaacaggatgctgatgcggcagttagtga 8750168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 298 - 451
Target Start/End: Original strand, 1650005 - 1650159
Alignment:
Q  298 agttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctatta 397  Q
    |||||||||| ||||||||  ||| ||||||||||  |||||||||||||  ||||||||||||||||||||||||||| || | ||||||||||  |||    
T  1650005 agttaaatatgtttttagtatttatattttgcgcca-tttgaagaatattatctacattttattaaatgtttttaaaattcttatattttatctccgtta 1650103  T
Q  398 acaaaattagt--cccctgatgttaattctttaacggaatgctgatgtggcagtta 451  Q
     |||||| | |   | ||| ||||||||||||||||||||| ||||||| ||||||    
T  1650104 tcaaaataattaatctctgttgttaattctttaacggaatgttgatgtgacagtta 1650159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 397
Target Start/End: Complemental strand, 18340739 - 18340641
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctatta 397  Q
    |||||||||  ||||||||||||||| |||||||||||| ||||||| ||| ||||||| ||||||||||||||||||| ||| ||| |||||| ||||    
T  18340739 gttaaatatgattttagtccttacatgttgcgccccttttaagaatagtccttacatttcattaaatgtttttaaaatcttcatattgtatctccatta 18340641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 15978390 - 15978543
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttg-aagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctatta 397  Q
    ||||||||| ||||||||||||| |||||| |    |||| ||||||| || ||| |||| |||||||||||||||||  |||||||||||||||  |||    
T  15978390 gttaaatatgtttttagtccttatattttgtgtttttttggaagaatagtctctatatttcattaaatgtttttaaaa--ctcacattttatctcggtta 15978487  T
Q  398 acaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
      ||||||||||   || ||||||||||||||| |||||||||||||||||||||||    
T  15978488 ttaaaattagtcat-tgttgttaattctttaacagaatgctgatgtggcagttagtg 15978543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 299 - 384
Target Start/End: Complemental strand, 22231249 - 22231164
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacat 384  Q
    ||||||||| ||||||||||||| ||||||||||||||| ||||||| |||||| |||| ||||||||||||| ||||||| ||||    
T  22231249 gttaaatatgtttttagtccttatattttgcgcccctttaaagaatagtccctatatttcattaaatgtttttgaaatcctgacat 22231164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 355 - 454
Target Start/End: Original strand, 3935447 - 3935543
Alignment:
Q  355 ttttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtcccctgatgttaattctttaac-ggaatgctgatgtggcagttagt 453  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||| ||||||| |    |||||||||| |||| ||||||||||||||||| |||||    
T  3935447 ttttattaaatgtttttaaaatcctcacattttatctccattatcaatattagtctc----tgttaattctctaacaggaatgctgatgtggcaattagt 3935542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 299 - 453
Target Start/End: Original strand, 3406460 - 3406613
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||  |||||| |||||| || ||||| | ||  |||||||| | | || |||| ||||||||||||||||||||| | ||||||||||| |||     
T  3406460 gttaaataggtttttaatccttaaatattgcgtctctacgaagaatagttcatatatttcattaaatgtttttaaaatccttatattttatctctgttat 3406559  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagt 453  Q
    |||||||| |   |||||||||||||||| || ||||| ||||||||||||||||    
T  3406560 caaaattaat-atctgatgttaattctttcacagaatgttgatgtggcagttagt 3406613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 350 - 452
Target Start/End: Original strand, 35383292 - 35383393
Alignment:
Q  350 ctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagt 449  Q
    |||||||| ||||||||||||||||||||||| |||||||| |  ||| |||||||||| || || |||||||| | ||||||||| |||| ||||||||    
T  35383292 ctacatttcattaaatgtttttaaaatcctcatattttatccccgttatcaaaattagt-ccatgctgttaattttctaacggaatactgaagtggcagt 35383390  T
Q  450 tag 452  Q
    |||    
T  35383391 tag 35383393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 4187925 - 4187837
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| |||||||||| ||||||||||||  |||| || |||| ||| ||||||| | ||||| |||||||||||||||||||||    
T  4187925 gttaaatatgtttttagtccctacattttgcgcaactttaaataatagtccttacatttcaataaatatttttaaaatcctcacatttt 4187837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 299 - 386
Target Start/End: Original strand, 87020 - 87107
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattt 386  Q
    ||||||||| ||||||||| ||| ||||||||  | | |||||||||  |||||||||| ||||||||||||||||||| ||||||||    
T  87020 gttaaatatgtttttagtctttatattttgcgttcatctgaagaataacccctacatttcattaaatgtttttaaaatcttcacattt 87107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 376
Target Start/End: Original strand, 37813375 - 37813453
Alignment:
Q  298 agttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaat 376  Q
    ||||||||||||||||||||| |||| ||| ||||  ||||||||||| ||| ||||||| ||||| ||||||||||||    
T  37813375 agttaaatatatttttagtccctacagtttacgccattttgaagaatagtccatacatttcattaagtgtttttaaaat 37813453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 374
Target Start/End: Complemental strand, 18339389 - 18339314
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaa 374  Q
    ||||||||||||||| ||||||||||||| ||    ||||||||||| ||| ||||||||| ||||||||||||||    
T  18339389 gttaaatatatttttggtccttacattttacgttattttgaagaataatccttacattttaataaatgtttttaaa 18339314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 454
Target Start/End: Complemental strand, 38834819 - 38834714
Alignment:
Q  347 tccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtcccctgatgttaattctttaacggaatgctgatgtggc 446  Q
    ||||||||||| |||||||||||||||||| | ||||||| |||||| ||| | |||||||| | ||| |||||||||| |||||||||  |||||||      
T  38834819 tccctacatttcattaaatgtttttaaaattcacacatttgatctctgttatc-aaattagt-ctctgctgttaattctctaacggaatattgatgtgct 38834722  T
Q  447 agttagtg 454  Q
    ||||||||    
T  38834721 agttagtg 38834714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 299 - 389
Target Start/End: Complemental strand, 20892633 - 20892544
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttat 389  Q
    ||||||||| |||||| |||||| |||||||| |  ||||||||||| || |||| ||| ||||||||||||||||||  |||||||||||    
T  20892633 gttaaatatgtttttaatccttaaattttgcgtca-tttgaagaatagtctctacgtttaattaaatgtttttaaaattatcacattttat 20892544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 120047 - 119959
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||||| |  ||||||  |||| ||| ||||||| | ||||||||||||||||||| |||||||    
T  120047 gttaaatatgtttttggtccctacattttgcccttctttgacaaatagtccttacatttcaataaatgtttttaaaatccttacatttt 119959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 39402213 - 39402300
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| ||||||||||||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  39402213 gttaaatatgtttttggtccctacattttgcgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatccctacatttt 39402300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 378
Target Start/End: Original strand, 119185 - 119264
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcc 378  Q
    ||||||||| ||||| ||||||| ||||||||   |||| ||||||| ||| ||||||| | ||||||||||||||||||    
T  119185 gttaaatatgtttttggtccttagattttgcgtgactttaaagaatagtccttacatttcaataaatgtttttaaaatcc 119264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 3879292 - 3879214
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcc 378  Q
    ||||||||||||||| |||| ||||||||||||   |||| |||||| ||||||||||| | | ||||||||||||||||    
T  3879292 gttaaatatatttttggtccctacattttgcgcgattttg-agaataatccctacatttcaatgaatgtttttaaaatcc 3879214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 364 - 451
Target Start/End: Original strand, 29751724 - 29751809
Alignment:
Q  364 atgtttttaaaatcctcacattttatctctattaacaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagtta 451  Q
    ||||||||||||| |||||||||||||||  ||| |||||||||| |||||   |||||||| |||||||||| ||||||||| ||||    
T  29751724 atgtttttaaaattctcacattttatctc-gttatcaaaattagt-ccctgcgcttaattctctaacggaatgttgatgtggcggtta 29751809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 364 - 451
Target Start/End: Original strand, 29752390 - 29752475
Alignment:
Q  364 atgtttttaaaatcctcacattttatctctattaacaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagtta 451  Q
    ||||||||||||| |||||||||||||||  ||| |||||||||| |||||   |||||||| |||||||||| ||||||||| ||||    
T  29752390 atgtttttaaaattctcacattttatctc-gttatcaaaattagt-ccctgcgcttaattctctaacggaatgttgatgtggcggtta 29752475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 365
Target Start/End: Complemental strand, 31932883 - 31932817
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaat 365  Q
    ||||||||| |||| | ||| ||||||||||||||||||||  |||| || ||||||||||||||||    
T  31932883 gttaaatatgttttcaatccctacattttgcgcccctttgataaatagtctctacattttattaaat 31932817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 31093515 - 31093423
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| ||||||||||||   |||||| |||| ||||||||||| | | ||||||||||||||||  ||||||| ||||    
T  31093515 gttaaatatgtttttggtccctacattttgcgcgattttgaa-aatagtccctacatttcaatgaatgtttttaaaatccctacattttttctc 31093423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 119011 - 119099
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||||| | ||||| |  |||| ||| ||||||| | ||||||||||||||||||  |||||||    
T  119011 gttaaatatgtttttggtccctacattttgccctcctttaataaatagtccttacatttcaataaatgtttttaaaatccctacatttt 119099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 3191799 - 3191886
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| |||||||||| |||||||||| |   ||||| ||||| ||| ||||||| | ||||||||||||||||||  |||||||    
T  3191799 gttaaatatgtttttagtccctacattttgcacgattttga-gaatagtccttacatttcaataaatgtttttaaaatccctacatttt 3191886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 5747280 - 5747193
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  5747280 gttaaatatgtttttggtccctacattttacgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatccctacatttt 5747193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 6543416 - 6543503
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  6543416 gttaaatatgtttttggtccctacattttacgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatccctacatttt 6543503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 14626178 - 14626090
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| || | |||||||  |||| || |||| ||||||||||| | ||||||||||||||||||  |||||||    
T  14626178 gttaaatatgtttttggtccctatactttgcgcgactttaaaaaatagtccctacatttcaataaatgtttttaaaatccctacatttt 14626090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 19353158 - 19353070
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| ||||||| |||||| |   |||||||||||| |||  |||||| | ||||||||||||||||||  |||||||    
T  19353158 gttaaatatgtttttggtccttagattttgtgtgactttgaagaatagtcctcacatttcaataaatgtttttaaaatccctacatttt 19353070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 21949401 - 21949488
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  21949401 gttaaatatgtttttggtccctacattttacgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatccctacatttt 21949488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 28641162 - 28641249
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  28641162 gttaaatatgtttttggtccctacattttacgcgattttga-gaataatccctacatttcaataaatgtttttaaaatccctacatttt 28641249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 378
Target Start/End: Complemental strand, 119868 - 119794
Alignment:
Q  304 atatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcc 378  Q
    |||| ||||| ||||||| ||||||||   |||||||||||| ||| | ||||| | ||||||||||||||||||    
T  119868 atatgtttttggtccttatattttgcgtgactttgaagaatagtccttgcatttcaataaatgtttttaaaatcc 119794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 346
Target Start/End: Original strand, 31588209 - 31588255
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatat 346  Q
    |||||||| ||||| ||||||||||||||||||| |||||| |||||    
T  31588209 ttaaatatgttttttgtccttacattttgcgcccttttgaataatat 31588255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 356
Target Start/End: Original strand, 35294846 - 35294907
Alignment:
Q  295 aaaagttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacatt 356  Q
    ||||||||||||| |||||||||| |||||||| ||| | |||||  |||| ||||||||||    
T  35294846 aaaagttaaatatgtttttagtccctacattttacgctcttttgataaatagtccctacatt 35294907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 5746762 - 5746849
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | |||||||||| |||||||  |||||||    
T  5746762 gttaaatatgtttttggtccctacattttacgcgattttga-gaataatccctacatttcaataaatgttttaaaaatccctacatttt 5746849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 6543933 - 6543847
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| ||||| ||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  6543933 gttaaatatgtttttggtcct-acattttacgcgattttga-gaataatccctacatttcaataaatgtttttaaaatccctacatttt 6543847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 387
Target Start/End: Complemental strand, 21949880 - 21949832
Alignment:
Q  339 aagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  21949880 aagaatagtccctacatttcaataaatgtttttaaaatccctacatttt 21949832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 28641680 - 28641593
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| | ||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  28641680 gttaaatatgtgtttggtccctacattttacgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatccctacatttt 28641593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 31162940 - 31162853
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||| ||||||| | ||||||||||||||||||  |||||||    
T  31162940 gttaaatatgtttttggtccctacattttacgcgattttga-gaataatccttacatttcaataaatgtttttaaaatccctacatttt 31162853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 1e-42; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 298 - 454
Target Start/End: Original strand, 17157546 - 17157701
Alignment:
Q  298 agttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctatta 397  Q
    |||||||||| |||||||| |||||||||| |||| | |||||||||| ||| ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  17157546 agttaaatatgtttttagttcttacattttacgcctcattgaagaatagtccatacatttcattaaatatttttaaaatcctcacattttatctctatta 17157645  T
Q  398 acaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
     |||||||||| | ||| |||||||||| ||||| ||||||||||||| ||||||||    
T  17157646 tcaaaattagt-cactgctgttaattctctaacgaaatgctgatgtggtagttagtg 17157701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 311 - 455
Target Start/End: Original strand, 21113042 - 21113185
Alignment:
Q  311 tttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtcc 410  Q
    |||||||||||||||||||||||  |||||||||| || |||||||| |||||||||||||||||| |||||||||||||||  ||| |||||||||| |    
T  21113042 tttagtccttacattttgcgccctattgaagaatagtctctacatttcattaaatgtttttaaaattctcacattttatctcctttatcaaaattagt-c 21113140  T
Q  411 cctgatgttaattctttaacggaatgctgatgtggcagttagtga 455  Q
     ||| |||||||||| |||||||||||||||||||||||||||||    
T  21113141 tctgctgttaattctctaacggaatgctgatgtggcagttagtga 21113185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 299 - 444
Target Start/End: Original strand, 5974012 - 5974156
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||| ||  |||     
T  5974012 gttaaatatgtttttagtccttatattttgcacccctttgaagaatagtccctacatttcattaaatgtttttaaaatccccacattttatttccgttat 5974111  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtg 444  Q
     ||||||||| || || |||||||||| ||||||||||||||||||    
T  5974112 taaaattagt-ccatgttgttaattctctaacggaatgctgatgtg 5974156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 298 - 453
Target Start/End: Complemental strand, 7646072 - 7645918
Alignment:
Q  298 agttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctatta 397  Q
    |||||||||| |||||||||||||||||||| || ||||||||||||| ||| ||||||| | |||||||||| ||||| |||||||||||||||  |||    
T  7646072 agttaaatatgtttttagtccttacattttgtgctcctttgaagaatagtccttacatttcaataaatgttttaaaaattctcacattttatctccgtta 7645973  T
Q  398 acaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagt 453  Q
     |||||||||| ||||| |||||||| | |||||||||| ||||||| || |||||    
T  7645972 tcaaaattagt-ccctgctgttaattttctaacggaatgttgatgtgacaattagt 7645918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 299 - 454
Target Start/End: Complemental strand, 8710429 - 8710276
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||||| ||  |||     
T  8710429 gttaaatatgtttttagtccttatattttgcacccctttgaagaatagtccttacatttcattaaatgtttttaaaatccccacattttatttc-gttat 8710331  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
     ||||||||| || || |||||||||| |||||||||| ||||||| || ||||||    
T  8710330 taaaattagt-ccatgttgttaattctctaacggaatgttgatgtgacaattagtg 8710276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 211442 - 211530
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| ||||||||||||||||||||    
T  211442 gttaaatatgtttttagtccttacattttgcgcccctttgaagaatagtccgtacatttcattaaatgattttaaaatcctcacatttt 211530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 297 - 454
Target Start/End: Complemental strand, 14713097 - 14712938
Alignment:
Q  297 aagttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctatt 396  Q
    ||||||||||| |||||| | |||||||||||||| | ||||||||||| ||| ||||||| ||||||||||||  |||| |||| ||||||||||| ||    
T  14713097 aagttaaatatgtttttaattcttacattttgcgctcttttgaagaatagtccttacatttcattaaatgttttagaaatgctcatattttatctctgtt 14712998  T
Q  397 aacaaaattagtcccctgatgttaattctttaacgg---aatgctgatgtggcagttagtg 454  Q
    | |||||||||| | ||| |||||||||| ||||||   ||||||||||||| ||||||||    
T  14712997 atcaaaattagt-ctctgctgttaattctctaacgggttaatgctgatgtggtagttagtg 14712938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 299 - 407
Target Start/End: Original strand, 4510189 - 4510298
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcct-cacattttatctctatta 397  Q
    ||||||||| ||||||||||||||||||| ||||  ||||||||||| ||||||||||| ||||||||||||||||||||| || ||||||||||  |||    
T  4510189 gttaaatatgtttttagtccttacattttacgcctatttgaagaatagtccctacatttcattaaatgtttttaaaatcctccatattttatctcggtta 4510288  T
Q  398 acaaaattag 407  Q
     |||||||||    
T  4510289 tcaaaattag 4510298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 299 - 402
Target Start/End: Complemental strand, 211810 - 211706
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaat-gtttttaaaatcctcacattttatctctatta 397  Q
    ||||||||| |||||| |||||||||||||||||  ||||||||||| ||||||||||| |||||||  ||||||||||| |||||||||||||| ||||    
T  211810 gttaaatatgtttttaatccttacattttgcgcctatttgaagaatagtccctacatttcattaaatattttttaaaatcttcacattttatctccatta 211711  T
Q  398 acaaa 402  Q
     ||||    
T  211710 tcaaa 211706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 299 - 444
Target Start/End: Original strand, 25932084 - 25932224
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||||||||||||| |||||||||||   ||||||||||||| ||||| ||||| ||||    |||||||||||||  |||||||||||  |||     
T  25932084 gttaaatatatttttagtctttacattttgctttcctttgaagaatagtccctgcatttcatta----tttttaaaatccttgcattttatctccgttat 25932179  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgtg 444  Q
    |||||||||| || || | ||| |||| ||||||||||||||||||    
T  25932180 caaaattagt-ccatgctattatttctctaacggaatgctgatgtg 25932224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 406
Target Start/End: Original strand, 1869452 - 1869559
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| ||||||||||||||||| | | || |||| || |||| |  |||||||| ||||||||||||||||||||||||||||||||||  |||     
T  1869452 gttaaatatgtttttagtccttacattctacaccactttaaaaaataatttctacatttcattaaatgtttttaaaatcctcacattttatctccgttat 1869551  T
Q  399 caaaatta 406  Q
    ||||||||    
T  1869552 caaaatta 1869559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 300 - 454
Target Start/End: Complemental strand, 25932476 - 25932320
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaaga---atattccctacattttattaaatgtttttaaaatcctcacattttatctctatt 396  Q
    |||||||| ||||||||||||| ||||||| ||  ||||||||   ||| || ||||||||  || |||||| ||||||| |||||||||||||||  ||    
T  25932476 ttaaatatgtttttagtccttatattttgcaccattttgaagattaatagtcactacatttcgttcaatgttattaaaattctcacattttatctccgtt 25932377  T
Q  397 aacaaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    | |||||||||| | |||  ||||||||| ||||||||| || |||||||||||||||    
T  25932376 atcaaaattagt-ctctgccgttaattctctaacggaattctaatgtggcagttagtg 25932320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 299 - 365
Target Start/End: Complemental strand, 17157922 - 17157856
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaat 365  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  17157922 gttaaatatgtttttagtccttacattttgcgccactttgaagaatagtccctacatttcattaaat 17157856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 310 - 454
Target Start/End: Original strand, 14712670 - 14712812
Alignment:
Q  310 ttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtc 409  Q
    |||||||||||||||||| |||| |||||||||||| | |||| |||||||||||||||||| ||||||| | ||||||| |   |||  |||||||||     
T  14712670 ttttagtccttacattttacgcctctttgaagaataat-cctatattttattaaatgttttttaaatccttatattttatatgcgttataaaaattagt- 14712767  T
Q  410 ccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
     |||  ||||||||||  |||||||||| ||||| ||||||||||    
T  14712768 tcctattgttaattctccaacggaatgcggatgtagcagttagtg 14712812  T

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Target: chr6; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 298 - 377
Target Start/End: Original strand, 5975832 - 5975910
Alignment:
Q  298 agttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatc 377  Q
    |||||||||| ||||||||||| ||||||| | || |||||||||||| | ||||||||||| |||||||||||||||||    
T  5975832 agttaaatatgtttttagtcctcacattttccacctctttgaagaatagt-cctacattttaataaatgtttttaaaatc 5975910  T

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Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 378
Target Start/End: Original strand, 14712831 - 14712910
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcc 378  Q
    ||||||||| ||||| |||| ||||||||||| | ||||||| |||| ||| ||||||| | ||||||||||||||||||    
T  14712831 gttaaatatgtttttggtccctacattttgcgtcactttgaaaaatagtccttacatttcaataaatgtttttaaaatcc 14712910  T

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Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 299 - 393
Target Start/End: Complemental strand, 19579291 - 19579197
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctct 393  Q
    |||||||||||| ||||||| |||||||||| ||  ||| ||||||| || || ||||| | ||||||||||||||||||  | |||||||||||    
T  19579291 gttaaatatattattagtccatacattttgcacctttttaaagaatagtctctgcatttcaataaatgtttttaaaatccctatattttatctct 19579197  T

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Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 299 - 397
Target Start/End: Complemental strand, 19595738 - 19595640
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctatta 397  Q
    ||||||||| || ||||||| |||||||||| ||  ||| ||||||| ||||||||||| | ||||| ||||||||||||  | |||||||||| ||||    
T  19595738 gttaaatatgttattagtccatacattttgcacctttttaaagaatagtccctacatttcaataaatatttttaaaatccctatattttatctccatta 19595640  T

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Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 34984632 - 34984541
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| ||||||||||||   ||||| ||||| ||||||||||| | ||||||||||||||||||| ||||||| ||||    
T  34984632 gttaaatatgtttttggtccctacattttgcgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatcct-acattttttctc 34984541  T

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Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 411
Target Start/End: Complemental strand, 20522209 - 20522133
Alignment:
Q  335 tttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaacaaaattagtccc 411  Q
    ||||||||||| ||||||||||| | |||||||||||||||||   |||||||| |||  || ||||||||||||||    
T  20522209 tttgaagaatagtccctacatttcaataaatgtttttaaaatcactacattttacctccgtttacaaaattagtccc 20522133  T

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Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 392
Target Start/End: Complemental strand, 6162777 - 6162684
Alignment:
Q  298 agttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    |||||||||| ||||| |||| ||||||||||||   ||||| ||||| || |||||||| | ||||||||||||||||||  ||||||| ||||    
T  6162777 agttaaatatgtttttggtccctacattttgcgcgattttga-gaatagtctctacatttcaataaatgtttttaaaatccctacattttttctc 6162684  T

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Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 392
Target Start/End: Original strand, 14257148 - 14257240
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  ||||||| ||||    
T  14257148 gttaaatatgtttttggtccctacattttacgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatccctacattttttctc 14257240  T

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Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 33107449 - 33107357
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||| ||||| |||| ||||||||||||   ||||| ||||| ||||||||||| | | ||||||||||||||||  ||||||| ||||    
T  33107449 gttaaatatgtttttggtccctacattttgcgcgattttga-gaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctc 33107357  T

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Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 20824683 - 20824596
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||    
T  20824683 gttaaatatgtttttggtccctacattttacgcgattttga-gaataatccctacatttcaataaatgtttttaaaatccctacatttt 20824596  T

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Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 358
Target Start/End: Complemental strand, 211640 - 211581
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacatttt 358  Q
    ||||||||||||||| |||| |||||||||||   |||||||||||| ||| ||||||||    
T  211640 gttaaatatattttttgtccctacattttgcgtaactttgaagaatagtccttacatttt 211581  T

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Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 374
Target Start/End: Complemental strand, 17157861 - 17157787
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaa 374  Q
    |||||||| ||||| |||| |||||||||||   |||||||||||| ||  ||||||||| |||||| |||||||    
T  17157861 ttaaatatgtttttggtccctacattttgcgtaactttgaagaatagtctgtacattttaataaatgattttaaa 17157787  T

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Target: scaffold0063 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 295 - 392
Target Start/End: Complemental strand, 35285 - 35188
Alignment:
Q  295 aaaagttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctc 392  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||    
T  35285 aaaagttaaatatgtttttagtccttacattttgcgtccctttgaagaatagtctctacattttattgaatgtttttaaaatcctcacattttatctc 35188  T

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Target: scaffold0063; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 300 - 454
Target Start/End: Original strand, 34794 - 34947
Alignment:
Q  300 ttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaac 399  Q
    |||||||| ||||||||||||| |||||||| |  |||||| |||  ||| ||||||| |||||||||||||||| | |||||||||||||||  ||| |    
T  34794 ttaaatatgtttttagtccttatattttgcgtctatttgaataatggtccatacatttcattaaatgtttttaaagtactcacattttatctccgttatc 34893  T
Q  400 aaaattagtcccctgatgttaattctttaacggaatgctgatgtggcagttagtg 454  Q
    ||||||||| | ||| | |||||| | |||||| |||||||||| ||||| ||||    
T  34894 aaaattagt-ctctgctattaattttctaacgggatgctgatgtcgcagtcagtg 34947  T

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Target: scaffold0933 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 443
Target Start/End: Original strand, 492 - 635
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacattttatctctattaa 398  Q
    ||||||||| |||||||| |||| ||||||||  | ||||| || |  | | ||||||| ||||||||||||||||||  ||||||||||| | | |||     
T  492 gttaaatatgtttttagttcttagattttgcgatcatttgacgagttgttcttacatttcattaaatgtttttaaaattttcacattttatttttgttat 591  T
Q  399 caaaattagtcccctgatgttaattctttaacggaatgctgatgt 443  Q
    |||||||||| |  || ||||| || | |||||||||||||||||    
T  592 caaaattagt-ctatgttgttatttttctaacggaatgctgatgt 635  T

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Target: scaffold0085 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 39940 - 39853
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttt 387  Q
    ||||||||| ||||| |||| |||||||| |||   ||||| ||||| ||||||||||| | ||||||||||||||||||| |||||||    
T  39940 gttaaatatgtttttggtccctacattttacgcgattttga-gaatagtccctacatttcaataaatgtttttaaaatccttacatttt 39853  T

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Target: scaffold0177 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 388
Target Start/End: Complemental strand, 25931 - 25842
Alignment:
Q  299 gttaaatatatttttagtccttacattttgcgcccctttgaagaatattccctacattttattaaatgtttttaaaatcctcacatttta 388  Q
    ||||||||| |||||||||| |||||||| ||| | |||||  |||| ||||||||||| | ||||| |||||||| | || ||||||||    
T  25931 gttaaatatgtttttagtccctacattttacgctcttttgataaatagtccctacatttaagtaaatatttttaaagttcttacatttta 25842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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