View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2499_low_35 (Length: 236)

Name: NF2499_low_35
Description: NF2499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2499_low_35
NF2499_low_35
[»] chr5 (25 HSPs)
chr5 (93-222)||(37429779-37429908)
chr5 (1-91)||(37430130-37430220)
chr5 (96-222)||(37399812-37399938)
chr5 (96-222)||(37391961-37392087)
chr5 (104-222)||(37595358-37595476)
chr5 (104-222)||(37640906-37641024)
chr5 (101-222)||(37703702-37703823)
chr5 (94-222)||(37712658-37712786)
chr5 (98-222)||(37412316-37412440)
chr5 (104-222)||(37534134-37534252)
chr5 (94-222)||(37436741-37436869)
chr5 (104-222)||(37697821-37697939)
chr5 (104-222)||(37824929-37825047)
chr5 (94-145)||(37381333-37381384)
chr5 (1-91)||(37437074-37437164)
chr5 (1-91)||(37534479-37534569)
chr5 (1-91)||(37595703-37595793)
chr5 (1-91)||(37641251-37641341)
chr5 (1-91)||(37712997-37713087)
chr5 (1-91)||(37825268-37825358)
chr5 (1-71)||(37381026-37381096)
chr5 (25-71)||(37412030-37412076)
chr5 (21-71)||(37698186-37698236)
chr5 (1-71)||(37704061-37704131)
chr5 (1-71)||(37399518-37399588)
[»] chr4 (4 HSPs)
chr4 (98-190)||(24216748-24216840)
chr4 (98-222)||(16841878-16842002)
chr4 (22-67)||(24216455-24216500)
chr4 (21-71)||(16841587-16841637)
[»] chr3 (1 HSPs)
chr3 (94-222)||(14554072-14554200)


Alignment Details
Target: chr5 (Bit Score: 122; Significance: 1e-62; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 93 - 222
Target Start/End: Complemental strand, 37429908 - 37429779
Alignment:
Q  93 gtccattcacatggaagaaactcattcttaatgctactaatttaagggagcttcatttgaatactgtggatatatcttcaatcagagagagatctttgtc 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37429908 gtccactcacatggaagaaactcattcttaatgctactaatttaagggagcttcatttgaatactgtggatatatctttaatcagagagagatctttgtc 37429809  T
Q  193 gctgctaaggaatttatcgtcctctttggt 222  Q
    ||||||||||||||||||||||||||||||    
T  37429808 gctgctaaggaatttatcgtcctctttggt 37429779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 37430220 - 37430130
Alignment:
Q  1 tcacgtgcgacatcatgtacgattatgtgattggtttggaccttagttgcaacaatctgaacggtgaattaacgaccaatagcaccatctt 91  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  37430220 tcacgtgcgacatcatgtacgattatgtgattggtctggaccttagttgcaacaatctgaacggtgaattagcggccaatagcaccatctt 37430130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 96 - 222
Target Start/End: Original strand, 37399812 - 37399938
Alignment:
Q  96 cattcacatggaagaaactcattcttaatgctactaatttaagggagcttcatttgaatactgtggatatatcttcaatcagagagagatctttgtcgct 195  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| | || |||||  |||||||||| ||||||||  |    
T  37399812 cattgacatggaagaaactcattcataatgctactaatttaagggagcttcatttgaatattgtgaacatgtcttccctcagagagagctctttgtcaat 37399911  T
Q  196 gctaaggaatttatcgtcctctttggt 222  Q
    ||||| |||||| || |||||||||||    
T  37399912 gctaaagaatttgtcatcctctttggt 37399938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 96 - 222
Target Start/End: Original strand, 37391961 - 37392087
Alignment:
Q  96 cattcacatggaagaaactcattcttaatgctactaatttaagggagcttcatttgaatactgtggatatatcttcaatcagagagagatctttgtcgct 195  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||| | ||| || |||||||| ||||||||  |    
T  37391961 cattgacatggaagaaactcattcataatgctactaatttaagggagcttcatttgaatagagtggatatgtattccattagagagagctctttgtctat 37392060  T
Q  196 gctaaggaatttatcgtcctctttggt 222  Q
    ||||| |||| | || |||||||||||    
T  37392061 gctaaagaatgtgtcatcctctttggt 37392087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 37595476 - 37595358
Alignment:
Q  104 tggaagaaactcattcttaatgctactaatttaagggagcttcatttgaatactgtggatatatcttcaatcagagagagatctttgtcgctgctaagga 203  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| || |  ||||| ||||||||  |||||| ||    
T  37595476 tggaagaaactcattcataatgctactaatttaagggagcttcatttgaatagtgtggatatgtcttccattacggagagctctttgtccatgctaaaga 37595377  T
Q  204 atttatcgtcctctttggt 222  Q
    |||| || |||||||||||    
T  37595376 atttttcatcctctttggt 37595358  T

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Target: chr5; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 37641024 - 37640906
Alignment:
Q  104 tggaagaaactcattcttaatgctactaatttaagggagcttcatttgaatactgtggatatatcttcaatcagagagagatctttgtcgctgctaagga 203  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| || |  ||||| ||||||||  |||||| ||    
T  37641024 tggaagaaactcattcataatgctactaatttaagggagcttcatttgaatagtgtggatatgtcttccattacggagagctctttgtcaatgctaaaga 37640925  T
Q  204 atttatcgtcctctttggt 222  Q
    |||| || |||||||||||    
T  37640924 atttgtcatcctctttggt 37640906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 101 - 222
Target Start/End: Complemental strand, 37703823 - 37703702
Alignment:
Q  101 acatggaagaaactcattcttaatgctactaatttaagggagcttcatttgaatactgtggatatatcttcaatcagagagagatctttgtcgctgctaa 200  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| || |  ||||| || |||||  ||||||    
T  37703823 acatggaagaaactcattcataatgctactaatttaagggagcttcatttgaatagtgtggatatgtcttccattacggagagctcattgtcaatgctaa 37703724  T
Q  201 ggaatttatcgtcctctttggt 222  Q
     |||||| || |||||||||||    
T  37703723 agaatttgtcatcctctttggt 37703702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 94 - 222
Target Start/End: Complemental strand, 37712786 - 37712658
Alignment:
Q  94 tccattcacatggaagaaactcattcttaatgctactaatttaagggagcttcatttgaatactgtggatatatcttcaatcagagagagatctttgtcg 193  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||| ||| ||||| ||| |||| | || ||||| ||||||||||| ||||||||     
T  37712786 tccattgacatggaagaaactcattcataatgctactaatttaagggaactttatttggataatgtgaacatgtcttccatcagagagagctctttgtca 37712687  T
Q  194 ctgctaaggaatttatcgtcctctttggt 222  Q
     |||||| |||||| || |||||||||||    
T  37712686 atgctaaagaatttgtcatcctctttggt 37712658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 98 - 222
Target Start/End: Original strand, 37412316 - 37412440
Alignment:
Q  98 ttcacatggaagaaactcattcttaatgctactaatttaagggagcttcatttgaatactgtggatatatcttcaatcagagagagatctttgtcgctgc 197  Q
    |||||||||||| ||||||||| ||||| ||| |||||||| ||||||||| |||||| ||| ||||| ||||| ||||||||||  |||||||||||||    
T  37412316 ttcacatggaaggaactcattcataatgttacaaatttaagcgagcttcatctgaatagtgttgatatgtcttccatcagagagaattctttgtcgctgc 37412415  T
Q  198 taaggaatttatcgtcctctttggt 222  Q
    ||| |||||| || |||||| ||||    
T  37412416 taaagaatttgtcatcctctctggt 37412440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 37534252 - 37534134
Alignment:
Q  104 tggaagaaactcattcttaatgctactaatttaagggagcttcatttgaatactgtggatatatcttcaatcagagagagatctttgtcgctgctaagga 203  Q
    |||||||||||||||| ||||||||||||||||||||| ||| ||||| ||| |||| | || ||||| ||||||||||| ||||||||  |||||| ||    
T  37534252 tggaagaaactcattcataatgctactaatttaagggaactttatttggataatgtgaacatgtcttccatcagagagagctctttgtcaatgctaaaga 37534153  T
Q  204 atttatcgtcctctttggt 222  Q
    |||| || |||||||||||    
T  37534152 atttgtcatcctctttggt 37534134  T

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Target: chr5; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 222
Target Start/End: Complemental strand, 37436869 - 37436741
Alignment:
Q  94 tccattcacatggaagaaactcattcttaatgctactaatttaagggagcttcatttgaatactgtggatatatcttcaatcagagagagatctttgtcg 193  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||   ||| | || ||||||||  ||||||| |||||||||    
T  37436869 tccattcgcatggaagaaactcattcataatgctactaatttaagggagcttcatctgaatggagtgaaaatgtcttcaattggagagagctctttgtcg 37436770  T
Q  194 ctgctaaggaatttatcgtcctctttggt 222  Q
     || ||| |||||| || || ||||||||    
T  37436769 ttgttaacgaatttgtcatcttctttggt 37436741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 37697939 - 37697821
Alignment:
Q  104 tggaagaaactcattcttaatgctactaatttaagggagcttcatttgaatactgtggatatatcttcaatcagagagagatctttgtcgctgctaagga 203  Q
    |||||||||||||||| ||||||||||||||||||||| |||||| | |||   ||| | || ||||||||| ||||||| || |||||  |||||| ||    
T  37697939 tggaagaaactcattcataatgctactaatttaagggatcttcatcttaatggagtgaacatgtcttcaatcggagagagctcattgtcaatgctaaaga 37697840  T
Q  204 atttatcgtcctctttggt 222  Q
    |||| || |||||||||||    
T  37697839 atttgtcatcctctttggt 37697821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 37825047 - 37824929
Alignment:
Q  104 tggaagaaactcattcttaatgctactaatttaagggagcttcatttgaatactgtggatatatcttcaatcagagagagatctttgtcgctgctaagga 203  Q
    |||||||||||||||| ||||||||||||||||||||| |||||| | |||   ||| | || ||||||||| ||||||| || |||||  |||||| ||    
T  37825047 tggaagaaactcattcataatgctactaatttaagggatcttcatcttaatggagtgaacatgtcttcaatcggagagagctcattgtcaatgctaaaga 37824948  T
Q  204 atttatcgtcctctttggt 222  Q
    |||| || |||||||||||    
T  37824947 atttgtcatcctctttggt 37824929  T

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Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 37381333 - 37381384
Alignment:
Q  94 tccattcacatggaagaaactcattcttaatgctactaatttaagggagctt 145  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  37381333 tccattgacatggaagaaactcattcataatgctactaatttaagggagctt 37381384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 37437164 - 37437074
Alignment:
Q  1 tcacgtgcgacatcatgtacgattatgtgattggtttggaccttagttgcaacaatctgaacggtgaattaacgaccaatagcaccatctt 91  Q
    |||||||||||| |||||  ||| | ||||||||| ||||||| ||||||||||||||||| |||||||||    ||||||||||||||||    
T  37437164 tcacgtgcgacaccatgtcagatcacgtgattggtctggacctcagttgcaacaatctgaaaggtgaattacatcccaatagcaccatctt 37437074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 37534569 - 37534479
Alignment:
Q  1 tcacgtgcgacatcatgtacgattatgtgattggtttggaccttagttgcaacaatctgaacggtgaattaacgaccaatagcaccatctt 91  Q
    |||||||||||| |||||  ||| | ||||||||| ||||||| |||||||||||||| || |||||||||    ||||||||||||||||    
T  37534569 tcacgtgcgacaccatgtcagatcacgtgattggtctggacctcagttgcaacaatctaaaaggtgaattacatcccaatagcaccatctt 37534479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 37595793 - 37595703
Alignment:
Q  1 tcacgtgcgacatcatgtacgattatgtgattggtttggaccttagttgcaacaatctgaacggtgaattaacgaccaatagcaccatctt 91  Q
    |||||||||||| |||||  ||| | ||||||||| ||||||| |||||||||||||| || |||||||||    ||||||||||||||||    
T  37595793 tcacgtgcgacaccatgtcagatcacgtgattggtctggacctcagttgcaacaatcttaaaggtgaattacatcccaatagcaccatctt 37595703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 37641341 - 37641251
Alignment:
Q  1 tcacgtgcgacatcatgtacgattatgtgattggtttggaccttagttgcaacaatctgaacggtgaattaacgaccaatagcaccatctt 91  Q
    |||||||||||| |||||  ||| | ||||||||| ||||||| |||||||||||||| || |||||||||    ||||||||||||||||    
T  37641341 tcacgtgcgacaccatgtcagatcacgtgattggtctggacctcagttgcaacaatctaaaaggtgaattacatcccaatagcaccatctt 37641251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 37713087 - 37712997
Alignment:
Q  1 tcacgtgcgacatcatgtacgattatgtgattggtttggaccttagttgcaacaatctgaacggtgaattaacgaccaatagcaccatctt 91  Q
    |||||||||||| |||||  ||| | ||||||||| ||||||| |||||||||||||| || |||||||||    ||||||||||||||||    
T  37713087 tcacgtgcgacaccatgtcagatcacgtgattggtctggacctcagttgcaacaatctaaaaggtgaattacatcccaatagcaccatctt 37712997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 37825358 - 37825268
Alignment:
Q  1 tcacgtgcgacatcatgtacgattatgtgattggtttggaccttagttgcaacaatctgaacggtgaattaacgaccaatagcaccatctt 91  Q
    |||||||||||| |||||  ||| | ||||||||| ||||||| |||||||||||||| || |||||||||    ||||||||||||||||    
T  37825358 tcacgtgcgacaccatgtcagatcacgtgattggtctggacctcagttgcaacaatctaaaaggtgaattacatcccaatagcaccatctt 37825268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 37381026 - 37381096
Alignment:
Q  1 tcacgtgcgacatcatgtacgattatgtgattggtttggaccttagttgcaacaatctgaacggtgaatta 71  Q
    |||||||||||  |||||  ||| ||||||||||| ||||||| ||||||| ||||||||| |||||||||    
T  37381026 tcacgtgcgactccatgtcagatcatgtgattggtctggacctcagttgcagcaatctgaatggtgaatta 37381096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 37412030 - 37412076
Alignment:
Q  25 atgtgattggtttggaccttagttgcaacaatctgaacggtgaatta 71  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||    
T  37412030 atgtgattggtttggaccttaggtgcaacaatcttaaaggtgaatta 37412076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 37698236 - 37698186
Alignment:
Q  21 gattatgtgattggtttggaccttagttgcaacaatctgaacggtgaatta 71  Q
    ||||| ||||||||||||||||| |||||||||||| |||| |||||||||    
T  37698236 gattacgtgattggtttggacctcagttgcaacaatttgaaaggtgaatta 37698186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 37704131 - 37704061
Alignment:
Q  1 tcacgtgcgacatcatgtacgattatgtgattggtttggaccttagttgcaacaatctgaacggtgaatta 71  Q
    |||||||||||| | |||  ||| | |||||||||||||| || ||||||||||||||||| |||||||||    
T  37704131 tcacgtgcgacaccgtgtctgatcacgtgattggtttggatctcagttgcaacaatctgaaaggtgaatta 37704061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 37399518 - 37399588
Alignment:
Q  1 tcacgtgcgacatcatgtacgattatgtgattggtttggaccttagttgcaacaatctgaacggtgaatta 71  Q
    |||||||||||| |||||  ||| | ||||||||| ||||||| ||||||||||| || || |||||||||    
T  37399518 tcacgtgcgacaccatgtcagatcacgtgattggtctggacctcagttgcaacaaactaaaaggtgaatta 37399588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 6e-24; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 98 - 190
Target Start/End: Original strand, 24216748 - 24216840
Alignment:
Q  98 ttcacatggaagaaactcattcttaatgctactaatttaagggagcttcatttgaatactgtggatatatcttcaatcagagagagatctttg 190  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |  |||||   ||||| |||||||||||||||||||| ||||||    
T  24216748 ttcacatggaagaaactcattcataatgctactaatttaagggagctttacctgaatggagtggacatatcttcaatcagagagagctctttg 24216840  T

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Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 222
Target Start/End: Original strand, 16841878 - 16842002
Alignment:
Q  98 ttcacatggaagaaactcattcttaatgctactaatttaagggagcttcatttgaatactgtggatatatcttcaatcagagagagatctttgtcgctgc 197  Q
    ||||| |||||||||||||||| |||||||||||| |||||||| ||| || | |||   ||| | || ||||||||  ||||||| ||||||||  |||    
T  16841878 ttcacttggaagaaactcattcataatgctactaaattaagggatctttatctaaatggagtgaacatgtcttcaattggagagagctctttgtcaatgc 16841977  T
Q  198 taaggaatttatcgtcctctttggt 222  Q
    |||  ||||| || |||||||||||    
T  16841978 taaacaatttgtcatcctctttggt 16842002  T

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Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 24216455 - 24216500
Alignment:
Q  22 attatgtgattggtttggaccttagttgcaacaatctgaacggtga 67  Q
    |||| ||||||||| ||||||||||||||||||||||||| |||||    
T  24216455 attacgtgattggtctggaccttagttgcaacaatctgaaaggtga 24216500  T

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Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 16841587 - 16841637
Alignment:
Q  21 gattatgtgattggtttggaccttagttgcaacaatctgaacggtgaatta 71  Q
    ||||| ||| ||||||||||||| |||||||||||| |||| |||||||||    
T  16841587 gattacgtggttggtttggacctcagttgcaacaatttgaaaggtgaatta 16841637  T

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Target: chr3 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 94 - 222
Target Start/End: Complemental strand, 14554200 - 14554072
Alignment:
Q  94 tccattcacatggaagaaactcattcttaatgctactaatttaagggagcttcatttgaatactgtggatatatcttcaatcagagagagatctttgtcg 193  Q
    |||||| |||||||| |||||||||| ||||||||||||||||||||| ||| || |||||   ||| | || ||||| ||||||||||| ||||||||     
T  14554200 tccatttacatggaataaactcattcataatgctactaatttaagggatctttatctgaatggagtgaacatgtcttccatcagagagagctctttgtca 14554101  T
Q  194 ctgctaaggaatttatcgtcctctttggt 222  Q
     |||||| |||||| || |||||||||||    
T  14554100 atgctaaagaatttgtcatcctctttggt 14554072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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