View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2500_high_2 (Length: 643)

Name: NF2500_high_2
Description: NF2500
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2500_high_2
NF2500_high_2
[»] chr2 (4 HSPs)
chr2 (11-391)||(31330366-31330746)
chr2 (11-391)||(31337087-31337467)
chr2 (36-182)||(2694672-2694805)
chr2 (159-236)||(31316273-31316352)
[»] chr4 (2 HSPs)
chr4 (125-391)||(31662490-31662756)
chr4 (440-583)||(10799540-10799683)
[»] scaffold0029 (1 HSPs)
scaffold0029 (440-583)||(57389-57532)
[»] chr8 (4 HSPs)
chr8 (440-583)||(28955447-28955590)
chr8 (36-182)||(5559164-5559297)
chr8 (104-266)||(34149932-34150098)
chr8 (32-82)||(25637223-25637273)
[»] chr3 (2 HSPs)
chr3 (36-182)||(19357899-19358032)
chr3 (151-236)||(18112715-18112802)
[»] chr5 (2 HSPs)
chr5 (36-182)||(37367646-37367779)
chr5 (36-182)||(41529793-41529926)
[»] chr7 (3 HSPs)
chr7 (201-318)||(34455146-34455266)
chr7 (32-106)||(4342653-4342727)
chr7 (141-182)||(34455281-34455322)
[»] chr6 (2 HSPs)
chr6 (114-221)||(5248687-5248795)
chr6 (405-438)||(28247277-28247310)
[»] chr1 (2 HSPs)
chr1 (580-629)||(7431387-7431436)
chr1 (580-629)||(14605745-14605794)
[»] scaffold0038 (1 HSPs)
scaffold0038 (405-438)||(47439-47472)


Alignment Details
Target: chr2 (Bit Score: 357; Significance: 0; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 11 - 391
Target Start/End: Complemental strand, 31330746 - 31330366
Alignment:
Q  11 cacagaatgccaaatgaaattacagcttatacttctaatgaatcaacataacttaaatttcttctcaaaataatcactttcacctcaatttaagctatta 110  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31330746 cacagaatgccaaatgaaataacagcttatacttctaatgaatcaacataacttaaatttcttctcaaaataatcacttttacctcaatttaagctatta 31330647  T
Q  111 atcacttatacttacattcagttgcaacattcagcccctgcctctatcttcttgccaagccaaaccctagctcttggtgtcttgccttaatcttgctcaa 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31330646 atcacttatacttacattcagtttcaacattcagcccctgcctctatcttcttgccaagccaaaccctagctcttggtgtcttgccttaatcttgctcaa 31330547  T
Q  211 gcttgcctctagctcaaaatacaacacaaacttcaattctctctacatgatcaccatcttagctctaactccttcaaaccatgctaggatcacttgaatg 310  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31330546 gcttgcctctagctcaaaatacaacacaaacttcaattctctttacatgatcaccatcttagctctaacttcttcaaaccatgctaggatcacttgaatg 31330447  T
Q  311 aacttcttaggagaggaagaatgagagaacaagttgtttagaggttctaattcttccataactcaagcaaaacacataagc 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31330446 aacttcttaggagaggaagaatgagagaacaagttgtttagaggttctacttcttccataactcaagcaaaacacataagc 31330366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 11 - 391
Target Start/End: Complemental strand, 31337467 - 31337087
Alignment:
Q  11 cacagaatgccaaatgaaattacagcttatacttctaatgaatcaacataacttaaatttcttctcaaaataatcactttcacctcaatttaagctatta 110  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31337467 cacagaatgccaaatgaaataacagcttatacttctaatgaatcaacataacttaaatttcttctcaaaataatcacttttacctcaatttaagctatta 31337368  T
Q  111 atcacttatacttacattcagttgcaacattcagcccctgcctctatcttcttgccaagccaaaccctagctcttggtgtcttgccttaatcttgctcaa 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31337367 atcacttatacttacattcagtttcaacattcagcccctgcctctatcttcttgccaagccaaaccctagctcttggtgtcttgccttaatcttgctcaa 31337268  T
Q  211 gcttgcctctagctcaaaatacaacacaaacttcaattctctctacatgatcaccatcttagctctaactccttcaaaccatgctaggatcacttgaatg 310  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31337267 gcttgcctctagctcaaaatacaacacaaacttcaattctctttacatgatcaccatcttagctctaacttcttcaaaccatgctaggatcacttgaatg 31337168  T
Q  311 aacttcttaggagaggaagaatgagagaacaagttgtttagaggttctaattcttccataactcaagcaaaacacataagc 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31337167 aacttcttaggagaggaagaatgagagaacaagttgtttagaggttctacttcttccataactcaagcaaaacacataagc 31337087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 36 - 182
Target Start/End: Complemental strand, 2694805 - 2694672
Alignment:
Q  36 cttatacttctaatgaatcaacataacttaaatttcttctcaaaataatcactttcacctcaatttaagctattaatcacttatacttacattcagttgc 135  Q
    ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||            
T  2694805 cttatacatctaatcaatcaacataacttgaatttcttctcaaaataatcacttttacctcaatttaagctattaatcacttatacttacat-------- 2694714  T
Q  136 aacattcagcccctgcctctatcttcttgccaagccaaaccctagct 182  Q
         |||||||||||||| |||||||||||||||||||||||||||    
T  2694713 -----tcagcccctgcctcaatcttcttgccaagccaaaccctagct 2694672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 31316273 - 31316352
Alignment:
Q  159 ttcttgccaagccaaa-ccctagctcttggtgtcttgccttaatcttgctcaagcttgcctcta--gctcaaaatacaaca 236  Q
    |||||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||  |||||||| ||||||    
T  31316273 ttcttgccaagccaaaaccctagctcttg-tgtcttgcattaatcttgctcaaacttgcctctaatgctcaaaacacaaca 31316352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 259; Significance: 1e-144; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 125 - 391
Target Start/End: Complemental strand, 31662756 - 31662490
Alignment:
Q  125 cattcagttgcaacattcagcccctgcctctatcttcttgccaagccaaaccctagctcttggtgtcttgccttaatcttgctcaagcttgcctctagct 224  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31662756 cattcagtttcaacattcagcccctgcctctatcttcttgccaagccaaaccctagctcttggtgtcttgccttaatcttgctcaagcttgcctctagct 31662657  T
Q  225 caaaatacaacacaaacttcaattctctctacatgatcaccatcttagctctaactccttcaaaccatgctaggatcacttgaatgaacttcttaggaga 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31662656 caaaatacaacacaaacttcaattctctctacatgatcaccatcttagctctaactccttcaaaccatgctaggatcacttgaatgaacttcttaggaga 31662557  T
Q  325 ggaagaatgagagaacaagttgtttagaggttctaattcttccataactcaagcaaaacacataagc 391  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31662556 ggaagaatgagagaacaagttgtttagaggttctacttcttccataactcaagcaaaacacataagc 31662490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 440 - 583
Target Start/End: Complemental strand, 10799683 - 10799540
Alignment:
Q  440 ttgggcaggtgtgctgatgttaaaactggaagagtaattggaatgaaaagtcatgataattatgttttcatggagcacttactcccaagtgcttttagtt 539  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  10799683 ttgggcaggtgtgccgatgttaaaactggaagggtaattggaatgaaaagtcatgataatcatgttttcatggagcacttactcccaagtgcgtttagtt 10799584  T
Q  540 cactgccctcccatgtgttaaatccattcactgagatcagtcaa 583  Q
    |||||||||||||||||||||||||| | |||||||| ||||||    
T  10799583 cactgccctcccatgtgttaaatccactaactgagataagtcaa 10799540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 120; Significance: 4e-61; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 440 - 583
Target Start/End: Complemental strand, 57532 - 57389
Alignment:
Q  440 ttgggcaggtgtgctgatgttaaaactggaagagtaattggaatgaaaagtcatgataattatgttttcatggagcacttactcccaagtgcttttagtt 539  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  57532 ttgggcaggtgtgccgatgttaaaactggaagggtaattggaatgaaaagtcatgataatcatgttttcatggagcacttactcccaagtgcgtttagtt 57433  T
Q  540 cactgccctcccatgtgttaaatccattcactgagatcagtcaa 583  Q
    |||||||||||||||||||||||||| |||||||||| ||||||    
T  57432 cactgccctcccatgtgttaaatccactcactgagattagtcaa 57389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 3e-56; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 440 - 583
Target Start/End: Original strand, 28955447 - 28955590
Alignment:
Q  440 ttgggcaggtgtgctgatgttaaaactggaagagtaattggaatgaaaagtcatgataattatgttttcatggagcacttactcccaagtgcttttagtt 539  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||    
T  28955447 ttgggcaggtgtgccgatgttaaaactggaagggtaattggaatgaaaagtcatgataatcatgttttcatggagcacttactaccaagtgcgtttagtt 28955546  T
Q  540 cactgccctcccatgtgttaaatccattcactgagatcagtcaa 583  Q
    |||| ||||||||||||||||||||| | |||||||||||||||    
T  28955547 cactaccctcccatgtgttaaatccacttactgagatcagtcaa 28955590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 36 - 182
Target Start/End: Original strand, 5559164 - 5559297
Alignment:
Q  36 cttatacttctaatgaatcaacataacttaaatttcttctcaaaataatcactttcacctcaatttaagctattaatcacttatacttacattcagttgc 135  Q
    ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||                
T  5559164 cttatacatctaatcaatcaacataacttgaatttcttctcaaaataatcacttttacctcaatttaagctattaatcacttatactt------------ 5559251  T
Q  136 aacattcagcccctgcctctatcttcttgccaagccaaaccctagct 182  Q
     |||||||||||||||||| |||||||||||||||||||||||||||    
T  5559252 -acattcagcccctgcctcaatcttcttgccaagccaaaccctagct 5559297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 104 - 266
Target Start/End: Complemental strand, 34150098 - 34149932
Alignment:
Q  104 gctattaatcacttatacttaca-ttcagttgcaacattcagcccctgcctctatcttcttgccaagccaaaccctagctcttggtgtcttgccttaatc 202  Q
    |||||| |||||||||||||||| |||| || ||| | ||| ||| || ||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  34150098 gctatttatcacttatacttacacttcaatttcaatactcatcccttgactcaatcttcttgccaagccaaaccctagctcttggtgtcttgcctcaatc 34149999  T
Q  203 ttgctcaagcttgcctcta--gctcaaaatacaac-acaaacttcaattctctctacatgatcacca 266  Q
    |||||||||||||||||||  ||||||| || |||  ||||||||||||  || |||||||| ||||    
T  34149998 ttgctcaagcttgcctctaatgctcaaagtataactccaaacttcaatttcctttacatgattacca 34149932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 25637273 - 25637223
Alignment:
Q  32 acagcttatacttctaatgaatcaacataacttaaatttcttctcaaaata 82  Q
    ||||||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  25637273 acagcttatgcttataattaatcaacataacttaaatttcttctcaaaata 25637223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 5e-39; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 36 - 182
Target Start/End: Complemental strand, 19358032 - 19357899
Alignment:
Q  36 cttatacttctaatgaatcaacataacttaaatttcttctcaaaataatcactttcacctcaatttaagctattaatcacttatacttacattcagttgc 135  Q
    ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||            
T  19358032 cttatacatctaatcaatcaacataacttgaatttcttctcaaaataatcacttttacctcaatttaagctattaatcacttatacttacat-------- 19357941  T
Q  136 aacattcagcccctgcctctatcttcttgccaagccaaaccctagct 182  Q
         |||||||||||||| |||||||||||||||||||||||||||    
T  19357940 -----tcagcccctgcctcaatcttcttgccaagccaaaccctagct 19357899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 151 - 236
Target Start/End: Original strand, 18112715 - 18112802
Alignment:
Q  151 cctctatcttcttgccaagccaaa-ccctagctcttggtgtcttgccttaatcttgctcaagcttgcctcta--gctcaaaatacaaca 236  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||  |||||||| ||||||    
T  18112715 cctcaatcttcttgccaagccaaaaccctagctcttg-tgtcttgcattaatcttgctcaaacttgcctctaatgctcaaaacacaaca 18112802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 36 - 182
Target Start/End: Complemental strand, 37367779 - 37367646
Alignment:
Q  36 cttatacttctaatgaatcaacataacttaaatttcttctcaaaataatcactttcacctcaatttaagctattaatcacttatacttacattcagttgc 135  Q
    ||||||| |||||| |||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||            
T  37367779 cttatacatctaatcaatcaacataacttgaattgcttctcaaaataatcacttttacctcaatttaagctattaatcacttatacttacat-------- 37367688  T
Q  136 aacattcagcccctgcctctatcttcttgccaagccaaaccctagct 182  Q
         |||||||||||||| |||||||||||||||||||||||||||    
T  37367687 -----tcagcccctgcctcaatcttcttgccaagccaaaccctagct 37367646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 36 - 182
Target Start/End: Original strand, 41529793 - 41529926
Alignment:
Q  36 cttatacttctaatgaatcaacataacttaaatttcttctcaaaataatcactttcacctcaatttaagctattaatcacttatacttacattcagttgc 135  Q
    ||||||| |||||| |||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||                
T  41529793 cttatacatctaatcaatcaacataacttgaatttcttcccaaaataatcacttttacctcaatttaagctattaatcacttatactt------------ 41529880  T
Q  136 aacattcagcccctgcctctatcttcttgccaagccaaaccctagct 182  Q
     |||||||||||||||||| |||||||||||||||||||||||||||    
T  41529881 -acattcagcccctgcctcaatcttcttgccaagccaaaccctagct 41529926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 1e-21; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 201 - 318
Target Start/End: Complemental strand, 34455266 - 34455146
Alignment:
Q  201 tcttgctcaagcttgcctcta--gctcaaaatacaacacaaa-cttcaattctctctacatgatcaccatcttagctctaactccttcaaaccatgctag 297  Q
    ||||||||||||||  |||||  |||  ||| |||||||||| |||||||| || ||||||||| |||||||||||||||||| |||||| |||||||||    
T  34455266 tcttgctcaagcttatctctaatgcttcaaacacaacacaaagcttcaattttcactacatgattaccatcttagctctaacttcttcaacccatgctag 34455167  T
Q  298 gatcacttgaatgaacttctt 318  Q
     |||||||||||||| |||||    
T  34455166 aatcacttgaatgaatttctt 34455146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 4342653 - 4342727
Alignment:
Q  32 acagcttatacttctaatgaatcaacataacttaaatttcttctcaaaataatcactttcacctcaatttaagct 106  Q
    ||||||||| ||| |||| ||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||    
T  4342653 acagcttatgcttataattaatcaacataacttaaatttcttctcaaaataagcacttttacctcaattttagct 4342727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 182
Target Start/End: Complemental strand, 34455322 - 34455281
Alignment:
Q  141 tcagcccctgcctctatcttcttgccaagccaaaccctagct 182  Q
    ||||||| ||| || |||||||||||||||||||||||||||    
T  34455322 tcagcccttgcttcaatcttcttgccaagccaaaccctagct 34455281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 114 - 221
Target Start/End: Complemental strand, 5248795 - 5248687
Alignment:
Q  114 acttatacttaca-ttcagttgcaacattcagcccctgcctctatcttcttgccaagccaaaccctagctcttggtgtcttgccttaatcttgctcaagc 212  Q
    ||||||||||||| |||| || ||| | ||||||| || ||| || || |||||||||||||||||| |||||||||||||| || ||||||||| ||||    
T  5248795 acttatacttacacttcaatttcaatactcagcccttgtctcgattttattgccaagccaaaccctatctcttggtgtcttgactcaatcttgctaaagc 5248696  T
Q  213 ttgcctcta 221  Q
    |||||||||    
T  5248695 ttgcctcta 5248687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 438
Target Start/End: Original strand, 28247277 - 28247310
Alignment:
Q  405 gggctaactatagaaatgacaagtataattctat 438  Q
    |||||||| |||||||||||||||||||||||||    
T  28247277 gggctaaccatagaaatgacaagtataattctat 28247310  T

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Target: chr1 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 580 - 629
Target Start/End: Complemental strand, 7431436 - 7431387
Alignment:
Q  580 tcaaagagcattctgcaatgaatattcattgagcattcaaagagcaaatt 629  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7431436 tcaaagagcattctgcaatgaatattcatagagcattcaaagagcaaatt 7431387  T

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Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 580 - 629
Target Start/End: Original strand, 14605745 - 14605794
Alignment:
Q  580 tcaaagagcattctgcaatgaatattcattgagcattcaaagagcaaatt 629  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  14605745 tcaaagagcattctgcaatgaatattcatagagcattcaaagatcaaatt 14605794  T

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Target: scaffold0038 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 438
Target Start/End: Original strand, 47439 - 47472
Alignment:
Q  405 gggctaactatagaaatgacaagtataattctat 438  Q
    |||||||| |||||||||||||||||||||||||    
T  47439 gggctaaccatagaaatgacaagtataattctat 47472  T

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