View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2501_low_31 (Length: 262)
Name: NF2501_low_31
Description: NF2501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2501_low_31 |
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Alignment Details
Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 26309230 - 26309482
Alignment:
| Q |
1 |
aaactcacatgtatgaaatatatttagacgaatggaactcatatcttggacaatacaagctttgttctttttcaggtgaacgactctgccttttttcatg |
100 |
Q |
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| T |
26309230 |
aaactcacatgtatgaaatatatttagacgaatggaactcatattttggacaatacaagctttgttctttttaaggtgaacgactctgccttttttcatg |
26309329 |
T |
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| Q |
101 |
tccaaagtcttaaaagtatctaggtccatagtctcaaagtattctttgtttggacacatgtgataagagaaaacatagtttgtgacctaacttttcttta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26309330 |
tccaaagtcttaaaagtatctaggtccatagtctcaaagtattctttttttggacacatgtgataagagaaaacatagtttgtgacctaacttttcttta |
26309429 |
T |
|
| Q |
201 |
gttcccaacttgtaacagctatcacaccaacactttcctaaccttcttcatct |
253 |
Q |
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||||||||||||||||||||| ||||| |||||||||||||||||| |||||| |
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| T |
26309430 |
gttcccaacttgtaacagctagcacacaaacactttcctaaccttcatcatct |
26309482 |
T |
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