View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2501_low_32 (Length: 255)
Name: NF2501_low_32
Description: NF2501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2501_low_32 |
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Alignment Details
Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 53426750 - 53426984
Alignment:
| Q |
1 |
catactcagcatggctgtattatcagttttctgtgagttttttctttctcaaacttgaattggtttattcattcatacaccaagcctagatcttaattga |
100 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53426750 |
catactcagcatggctgtattatcagctttctgtgagttttttctttctcaaacttgaattggtttattcattcatacaccaagcctagatcttaattga |
53426849 |
T |
|
| Q |
101 |
ccctcattggaaggagtcataggtgaatatttggacatgcataatttgttttttctttatatcctgatatagattctttaccaaaactaatgagcttatg |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
53426850 |
ccctcattggaaggagtcataggtgaatatttggacatgcataatttgttttttctttaaatcctgatatagattctttaccaaaactaatgagcttatg |
53426949 |
T |
|
| Q |
201 |
ttcacaaaaatgacaaatttactatttcattttct |
235 |
Q |
| |
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||||||||||||||||||||||||||||||||||| |
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| T |
53426950 |
ttcacaaaaatgacaaatttactatttcattttct |
53426984 |
T |
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