View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2503_low_10 (Length: 334)
Name: NF2503_low_10
Description: NF2503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2503_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 13 - 317
Target Start/End: Complemental strand, 47156975 - 47156671
Alignment:
| Q |
13 |
agcagagaatagacgggtccttgtccttctttaccattataacaatcacgcaatattgaaggtgttatatatgtatatctcctccctactgcaacgtgac |
112 |
Q |
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| T |
47156975 |
agcagagaatagacgggtccttgtccttctttaccattataacaatcacgcaatattgaaggtgttatatatgtatatctcctccctactgcaacgtgac |
47156876 |
T |
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| Q |
113 |
aattcgaattgtctcgtcactttaattctgcttcaaaatcagattctgattcagtatataggggccactccatttcaattcaattttatagtcctagatt |
212 |
Q |
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| T |
47156875 |
aattcgaattgtctcgtcactttaattctgcttcaaaatcagattttgattcagtatataggggccactccatttcaattcaattttatagtcctagatt |
47156776 |
T |
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| Q |
213 |
ctttcttttttctggtattcaatgttatgttgaagtatgtaacatttattatttatatttacagtcatcctttttcatttaattttcactgaaaaggaac |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
47156775 |
ctttcttttttctggtattcaatgttatgttgaagtatgtaacatttattatttatatttacagccatcctttttcatttaattttcactgaaaaggaac |
47156676 |
T |
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| Q |
313 |
tttct |
317 |
Q |
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||||| |
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| T |
47156675 |
tttct |
47156671 |
T |
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