View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2504_high_53 (Length: 239)
Name: NF2504_high_53
Description: NF2504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2504_high_53 |
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Alignment Details
Target: chr6 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 2222423 - 2222647
Alignment:
| Q |
1 |
ctatttcttcttcttccggtgttgttgaaggttcaagttcagatgaagaaggtgaagagtaacagaaactttgaagctgtggtggtgttgttcttgttga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2222423 |
ctatttcttcttcttccggtgttgttgaaggttcaagttcagatgaagaaggtgaagagtaacagaaactttgaagctgtggtggtgttgttcttgttga |
2222522 |
T |
|
| Q |
101 |
tgatgatgaagtgacagtagctatagattcctctgagcttgagtacgaggtttttcgtggtgttaacattgatattggtcgtgtttcttcttcttggtcg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2222523 |
tgatgatgaagtgacagtagctatagattcctctgagcttgagtaggaggtttttcgtggtgttaacattgatattggtcgtgtttcttcttcttggtcg |
2222622 |
T |
|
| Q |
201 |
tttttgtttgatacgaggttgtttt |
225 |
Q |
| |
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||||| ||||||||||||||||||| |
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| T |
2222623 |
tttttatttgatacgaggttgtttt |
2222647 |
T |
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