View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2504_low_19 (Length: 434)

Name: NF2504_low_19
Description: NF2504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2504_low_19
NF2504_low_19
[»] chr6 (66 HSPs)
chr6 (1-107)||(23291828-23291934)
chr6 (1-107)||(13480292-13480398)
chr6 (1-107)||(20561121-20561227)
chr6 (1-107)||(32337648-32337754)
chr6 (1-106)||(5064530-5064635)
chr6 (1-107)||(21880558-21880664)
chr6 (1-106)||(22493964-22494069)
chr6 (24-109)||(3586403-3586488)
chr6 (6-98)||(737900-737992)
chr6 (30-109)||(26542730-26542809)
chr6 (1-106)||(7612632-7612737)
chr6 (1-105)||(19296423-19296527)
chr6 (24-109)||(26503471-26503555)
chr6 (41-108)||(15819807-15819874)
chr6 (24-109)||(31879564-31879649)
chr6 (41-109)||(738014-738082)
chr6 (1-109)||(3299751-3299859)
chr6 (42-110)||(21544516-21544584)
chr6 (41-109)||(23292061-23292129)
chr6 (41-108)||(13480208-13480275)
chr6 (41-108)||(16704626-16704693)
chr6 (42-108)||(7612548-7612614)
chr6 (41-110)||(21880362-21880431)
chr6 (40-108)||(3299559-3299627)
chr6 (40-108)||(16706967-16707035)
chr6 (40-108)||(20560928-20560996)
chr6 (1-109)||(31386883-31386990)
chr6 (41-105)||(32337567-32337631)
chr6 (41-108)||(5064335-5064402)
chr6 (41-108)||(13480525-13480592)
chr6 (45-108)||(32337888-32337950)
chr6 (41-107)||(3299876-3299942)
chr6 (42-108)||(20774399-20774465)
chr6 (41-110)||(20995008-20995077)
chr6 (42-107)||(26542938-26543003)
chr6 (41-110)||(31879456-31879524)
chr6 (1-109)||(1066331-1066439)
chr6 (1-105)||(20774173-20774276)
chr6 (41-109)||(20994818-20994886)
chr6 (41-109)||(21880681-21880749)
chr6 (41-108)||(3586212-3586278)
chr6 (42-105)||(19296545-19296608)
chr6 (41-108)||(26503671-26503738)
chr6 (41-108)||(30234909-30234976)
chr6 (41-95)||(9607633-9607687)
chr6 (41-123)||(22494197-22494278)
chr6 (41-107)||(23291745-23291811)
chr6 (42-108)||(31879776-31879842)
chr6 (41-105)||(5064652-5064716)
chr6 (41-109)||(8427199-8427267)
chr6 (40-108)||(26542614-26542684)
chr6 (41-82)||(22493907-22493948)
chr6 (42-109)||(1066457-1066523)
chr6 (41-106)||(7612866-7612931)
chr6 (41-117)||(18865112-18865187)
chr6 (41-105)||(20774092-20774156)
chr6 (40-109)||(19039105-19039174)
chr6 (41-105)||(20561244-20561307)
chr6 (56-107)||(3586540-3586591)
chr6 (41-72)||(15819604-15819635)
chr6 (41-108)||(31386799-31386866)
chr6 (41-103)||(1066143-1066205)
chr6 (219-252)||(4175887-4175920)
chr6 (56-105)||(26500281-26500330)
chr6 (69-109)||(15819641-15819681)
chr6 (42-102)||(31393501-31393561)
[»] chr5 (65 HSPs)
chr5 (1-107)||(33735507-33735613)
chr5 (1-109)||(25253170-25253278)
chr5 (1-104)||(6421819-6421922)
chr5 (1-107)||(18013696-18013802)
chr5 (1-107)||(32052418-32052524)
chr5 (1-109)||(25316960-25317069)
chr5 (1-107)||(37945078-37945184)
chr5 (1-109)||(22533582-22533690)
chr5 (1-109)||(18934797-18934905)
chr5 (1-109)||(27753671-27753779)
chr5 (24-109)||(16118143-16118228)
chr5 (1-109)||(34404567-34404676)
chr5 (31-107)||(12990902-12990978)
chr5 (31-107)||(13064523-13064599)
chr5 (1-109)||(22024062-22024170)
chr5 (27-106)||(8323166-8323245)
chr5 (41-108)||(33735630-33735697)
chr5 (41-108)||(34404484-34404551)
chr5 (1-106)||(21260949-21261054)
chr5 (41-108)||(14745448-14745515)
chr5 (41-108)||(25253403-25253470)
chr5 (41-108)||(25317194-25317261)
chr5 (41-108)||(32052541-32052608)
chr5 (41-107)||(21260866-21260932)
chr5 (1-106)||(41339549-41339653)
chr5 (1-109)||(7015701-7015809)
chr5 (41-108)||(37944994-37945061)
chr5 (41-110)||(7015826-7015895)
chr5 (41-110)||(12991105-12991174)
chr5 (40-108)||(7015508-7015576)
chr5 (41-105)||(16117964-16118028)
chr5 (40-108)||(22533390-22533458)
chr5 (41-108)||(32052224-32052291)
chr5 (41-108)||(37945311-37945377)
chr5 (40-122)||(147422-147503)
chr5 (41-107)||(25253087-25253153)
chr5 (41-107)||(25316877-25316943)
chr5 (41-110)||(13064726-13064795)
chr5 (41-105)||(6421939-6422003)
chr5 (41-105)||(22533707-22533771)
chr5 (44-108)||(31118955-31119019)
chr5 (41-108)||(22024187-22024254)
chr5 (42-112)||(8323374-8323444)
chr5 (30-96)||(12628328-12628394)
chr5 (41-107)||(18934714-18934780)
chr5 (41-107)||(27753480-27753545)
chr5 (40-114)||(41339669-41339743)
chr5 (41-105)||(6421625-6421689)
chr5 (41-105)||(8323059-8323123)
chr5 (1-52)||(14745532-14745583)
chr5 (41-108)||(33735313-33735380)
chr5 (57-111)||(9915428-9915482)
chr5 (41-111)||(21261180-21261250)
chr5 (41-97)||(14745630-14745686)
chr5 (41-109)||(16118268-16118336)
chr5 (41-105)||(41339357-41339421)
chr5 (41-105)||(18935031-18935094)
chr5 (41-106)||(20705029-20705096)
chr5 (51-106)||(12628263-12628318)
chr5 (1-51)||(20704821-20704872)
chr5 (41-81)||(18013639-18013679)
chr5 (41-97)||(18013929-18013984)
chr5 (213-251)||(2413205-2413243)
chr5 (217-251)||(2414411-2414445)
chr5 (41-106)||(20704740-20704804)
[»] chr8 (81 HSPs)
chr8 (1-106)||(25287876-25287981)
chr8 (1-107)||(37342976-37343082)
chr8 (1-107)||(40525591-40525697)
chr8 (1-107)||(7587-7693)
chr8 (1-107)||(11478229-11478335)
chr8 (1-107)||(20096104-20096210)
chr8 (1-107)||(23424596-23424702)
chr8 (1-107)||(29190353-29190459)
chr8 (1-103)||(36623551-36623653)
chr8 (1-107)||(43866795-43866901)
chr8 (2-107)||(547629-547734)
chr8 (2-107)||(41251208-41251313)
chr8 (1-109)||(40422353-40422460)
chr8 (1-107)||(26739801-26739906)
chr8 (2-105)||(15716072-15716175)
chr8 (40-117)||(23424828-23424905)
chr8 (1-106)||(41802011-41802116)
chr8 (30-106)||(31690008-31690084)
chr8 (1-107)||(27856826-27856932)
chr8 (41-110)||(24529973-24530042)
chr8 (39-107)||(41182018-41182086)
chr8 (2-109)||(22763680-22763787)
chr8 (1-108)||(37713780-37713887)
chr8 (41-108)||(40422477-40422544)
chr8 (41-108)||(40525507-40525574)
chr8 (28-109)||(35163694-35163775)
chr8 (41-109)||(9632327-9632395)
chr8 (41-101)||(38619805-38619865)
chr8 (40-108)||(41182212-41182280)
chr8 (41-108)||(7710-7777)
chr8 (30-109)||(9632441-9632520)
chr8 (41-108)||(9632620-9632687)
chr8 (41-108)||(11478145-11478212)
chr8 (41-108)||(41251123-41251190)
chr8 (41-107)||(22763596-22763662)
chr8 (41-107)||(26740035-26740101)
chr8 (1-106)||(13566494-13566599)
chr8 (40-105)||(27857058-27857123)
chr8 (41-109)||(547752-547820)
chr8 (41-105)||(20096023-20096087)
chr8 (41-109)||(38600267-38600335)
chr8 (42-105)||(7396-7459)
chr8 (42-109)||(23424511-23424578)
chr8 (41-108)||(36623352-36623419)
chr8 (41-108)||(40422160-40422227)
chr8 (42-108)||(36623671-36623737)
chr8 (42-108)||(43866711-43866777)
chr8 (41-106)||(15716193-15716258)
chr8 (41-106)||(41801818-41801883)
chr8 (41-97)||(20096341-20096397)
chr8 (1-109)||(23514105-23514213)
chr8 (42-106)||(37343100-37343164)
chr8 (41-108)||(25287792-25287859)
chr8 (41-117)||(547422-547497)
chr8 (41-109)||(27436562-27436630)
chr8 (41-109)||(43867028-43867096)
chr8 (41-108)||(31689895-31689962)
chr8 (40-111)||(31690212-31690282)
chr8 (30-105)||(40933288-40933363)
chr8 (41-109)||(27437552-27437620)
chr8 (41-105)||(29190476-29190540)
chr8 (45-105)||(35163500-35163560)
chr8 (40-108)||(40525823-40525891)
chr8 (38-109)||(24529798-24529868)
chr8 (41-108)||(29190160-29190227)
chr8 (42-105)||(37713699-37713762)
chr8 (76-116)||(41802163-41802203)
chr8 (41-108)||(23514021-23514088)
chr8 (41-108)||(37342782-37342849)
chr8 (47-105)||(13566413-13566471)
chr8 (41-106)||(26739714-26739784)
chr8 (40-105)||(41251442-41251507)
chr8 (41-89)||(11478462-11478510)
chr8 (41-105)||(22763913-22763977)
chr8 (41-108)||(7393178-7393245)
chr8 (41-87)||(29574763-29574809)
chr8 (51-105)||(40933180-40933234)
chr8 (1-35)||(41251392-41251426)
chr8 (2-35)||(7478-7511)
chr8 (41-86)||(25288109-25288154)
chr8 (72-108)||(41181973-41182009)
[»] chr7 (53 HSPs)
chr7 (1-107)||(34454674-34454780)
chr7 (1-106)||(12929449-12929554)
chr7 (1-107)||(26825824-26825930)
chr7 (1-106)||(12930933-12931038)
chr7 (1-109)||(27557932-27558040)
chr7 (1-107)||(37563548-37563654)
chr7 (1-107)||(43938088-43938194)
chr7 (1-109)||(15827913-15828021)
chr7 (1-107)||(19980034-19980140)
chr7 (41-122)||(5280588-5280669)
chr7 (1-106)||(12928234-12928339)
chr7 (2-106)||(20947278-20947382)
chr7 (24-109)||(44545787-44545872)
chr7 (30-105)||(47082043-47082118)
chr7 (24-109)||(47121385-47121469)
chr7 (1-109)||(5636109-5636217)
chr7 (40-108)||(26825630-26825698)
chr7 (41-108)||(26825947-26826014)
chr7 (41-108)||(27558169-27558236)
chr7 (24-101)||(45586572-45586648)
chr7 (41-105)||(20947196-20947260)
chr7 (41-108)||(37563671-37563738)
chr7 (41-107)||(25049478-25049544)
chr7 (42-108)||(34454798-34454864)
chr7 (1-106)||(5280466-5280571)
chr7 (41-105)||(5636342-5636406)
chr7 (41-97)||(12931055-12931111)
chr7 (41-113)||(34454479-34454551)
chr7 (42-106)||(44545597-44545661)
chr7 (41-105)||(44545912-44545976)
chr7 (41-108)||(5280272-5280339)
chr7 (41-108)||(5636027-5636093)
chr7 (41-108)||(12929571-12929638)
chr7 (41-108)||(37563354-37563421)
chr7 (41-108)||(43937894-43937961)
chr7 (41-108)||(43938211-43938278)
chr7 (41-108)||(47081847-47081914)
chr7 (41-107)||(12928356-12928422)
chr7 (42-107)||(47121596-47121661)
chr7 (41-108)||(7159245-7159312)
chr7 (41-108)||(12928037-12928104)
chr7 (42-105)||(27557851-27557914)
chr7 (40-105)||(19980209-19980274)
chr7 (41-105)||(35262629-35262693)
chr7 (221-252)||(3868180-3868211)
chr7 (41-108)||(12930772-12930839)
chr7 (41-107)||(20947511-20947577)
chr7 (41-87)||(31695647-31695693)
chr7 (1-35)||(43937978-43938012)
chr7 (60-117)||(15828058-15828115)
chr7 (219-252)||(36718243-36718276)
chr7 (40-80)||(19979979-19980018)
chr7 (212-252)||(36719026-36719065)
[»] chr4 (68 HSPs)
chr4 (1-107)||(34238554-34238660)
chr4 (1-107)||(53559471-53559577)
chr4 (2-107)||(12691491-12691596)
chr4 (1-109)||(8287016-8287124)
chr4 (1-107)||(20086631-20086737)
chr4 (1-107)||(33294228-33294334)
chr4 (1-107)||(47862236-47862342)
chr4 (1-107)||(22249927-22250033)
chr4 (1-107)||(47980769-47980875)
chr4 (1-109)||(37678040-37678148)
chr4 (1-107)||(26601270-26601376)
chr4 (1-107)||(54961515-54961621)
chr4 (1-105)||(13872265-13872369)
chr4 (1-109)||(19916848-19916956)
chr4 (1-109)||(35730853-35730961)
chr4 (41-112)||(37677844-37677915)
chr4 (24-106)||(48507521-48507603)
chr4 (24-109)||(489375-489460)
chr4 (24-109)||(515167-515252)
chr4 (41-113)||(12691401-12691473)
chr4 (41-108)||(8287250-8287317)
chr4 (30-109)||(27813162-27813240)
chr4 (41-109)||(19740859-19740927)
chr4 (41-105)||(35730978-35731042)
chr4 (41-108)||(53559704-53559771)
chr4 (41-108)||(54961431-54961498)
chr4 (41-106)||(54961748-54961813)
chr4 (41-105)||(12691722-12691786)
chr4 (40-112)||(19916972-19917044)
chr4 (41-109)||(47862151-47862219)
chr4 (41-105)||(48507734-48507798)
chr4 (41-108)||(50246175-50246242)
chr4 (42-108)||(22250051-22250117)
chr4 (41-107)||(37678165-37678231)
chr4 (45-106)||(47980687-47980748)
chr4 (1-109)||(50246049-50246158)
chr4 (1-105)||(32846446-32846549)
chr4 (41-108)||(8286932-8286999)
chr4 (41-108)||(13872069-13872136)
chr4 (41-108)||(20086437-20086504)
chr4 (41-108)||(22249733-22249800)
chr4 (41-108)||(33294460-33294527)
chr4 (49-108)||(35730662-35730721)
chr4 (41-107)||(32846363-32846429)
chr4 (41-110)||(19916654-19916723)
chr4 (41-110)||(47981953-47982022)
chr4 (40-105)||(50245860-50245925)
chr4 (41-117)||(47862469-47862543)
chr4 (42-109)||(13872387-13872454)
chr4 (34-109)||(20601064-20601139)
chr4 (42-109)||(37732397-37732464)
chr4 (41-106)||(37732299-37732364)
chr4 (42-94)||(34238781-34238833)
chr4 (41-104)||(34238474-34238537)
chr4 (41-114)||(33294138-33294211)
chr4 (41-109)||(27813370-27813437)
chr4 (41-108)||(13336871-13336938)
chr4 (58-101)||(20600954-20600997)
chr4 (45-106)||(27813051-27813112)
chr4 (41-98)||(45199137-45199194)
chr4 (220-252)||(28910986-28911018)
chr4 (41-87)||(22882360-22882406)
chr4 (41-87)||(22934024-22934070)
chr4 (40-74)||(26601392-26601426)
chr4 (219-252)||(2357703-2357736)
chr4 (218-251)||(28909871-28909904)
chr4 (12-45)||(53752331-53752364)
chr4 (219-251)||(46258602-46258634)
[»] chr3 (62 HSPs)
chr3 (1-107)||(53037111-53037217)
chr3 (3-107)||(51279425-51279528)
chr3 (1-107)||(10749402-10749508)
chr3 (3-107)||(21300327-21300431)
chr3 (1-105)||(40256958-40257062)
chr3 (1-107)||(11312929-11313035)
chr3 (1-107)||(22129090-22129196)
chr3 (1-107)||(55036753-55036859)
chr3 (24-109)||(30803953-30804038)
chr3 (14-107)||(1741581-1741674)
chr3 (24-109)||(33989121-33989205)
chr3 (3-87)||(10997960-10998044)
chr3 (30-109)||(24576403-24576482)
chr3 (28-109)||(35432462-35432543)
chr3 (1-105)||(33458000-33458104)
chr3 (41-108)||(1741387-1741454)
chr3 (41-108)||(10749318-10749385)
chr3 (3-106)||(30890293-30890396)
chr3 (41-116)||(55036661-55036736)
chr3 (41-107)||(33458235-33458301)
chr3 (24-105)||(46670452-46670532)
chr3 (41-110)||(53037025-53037094)
chr3 (41-105)||(30890524-30890588)
chr3 (40-108)||(51279231-51279299)
chr3 (41-108)||(10749713-10749780)
chr3 (3-102)||(21255730-21255829)
chr3 (41-108)||(28310665-28310732)
chr3 (41-107)||(10997878-10997944)
chr3 (41-107)||(10998190-10998256)
chr3 (41-103)||(40256879-40256941)
chr3 (42-107)||(21255849-21255914)
chr3 (41-105)||(21300450-21300514)
chr3 (42-106)||(30654678-30654742)
chr3 (42-106)||(30803848-30803912)
chr3 (41-105)||(55036986-55037050)
chr3 (41-108)||(11312735-11312802)
chr3 (45-108)||(30654800-30654863)
chr3 (41-105)||(24576291-24576355)
chr3 (1-108)||(28310541-28310648)
chr3 (53-108)||(35432406-35432461)
chr3 (41-108)||(46670248-46670315)
chr3 (41-118)||(22128997-22129073)
chr3 (42-109)||(30654483-30654550)
chr3 (1-94)||(38642867-38642960)
chr3 (42-87)||(46670573-46670618)
chr3 (41-77)||(22129326-22129362)
chr3 (41-105)||(28310352-28310415)
chr3 (40-108)||(40257189-40257257)
chr3 (42-117)||(49640-49715)
chr3 (41-108)||(33989015-33989081)
chr3 (41-107)||(30804165-30804231)
chr3 (41-107)||(38642632-38642698)
chr3 (58-108)||(38642990-38643040)
chr3 (41-106)||(33989336-33989401)
chr3 (45-106)||(53037348-53037409)
chr3 (41-105)||(33457919-33457983)
chr3 (51-110)||(51279541-51279600)
chr3 (1-35)||(10998139-10998173)
chr3 (41-110)||(24576612-24576679)
chr3 (1-34)||(10749663-10749696)
chr3 (41-82)||(30890233-30890274)
chr3 (220-252)||(13618748-13618780)
[»] chr2 (65 HSPs)
chr2 (1-107)||(20911214-20911320)
chr2 (1-107)||(32519239-32519345)
chr2 (1-110)||(22731723-22731832)
chr2 (1-108)||(45663701-45663808)
chr2 (1-107)||(1150021-1150127)
chr2 (1-107)||(16367157-16367263)
chr2 (1-107)||(8089536-8089642)
chr2 (1-105)||(17580412-17580516)
chr2 (30-109)||(41846584-41846663)
chr2 (1-106)||(9693937-9694042)
chr2 (1-109)||(22309623-22309731)
chr2 (41-108)||(20911130-20911197)
chr2 (3-109)||(43682049-43682155)
chr2 (24-109)||(17366733-17366818)
chr2 (1-109)||(5608786-5608894)
chr2 (41-108)||(1149937-1150004)
chr2 (41-108)||(9694059-9694126)
chr2 (2-109)||(9959017-9959124)
chr2 (42-108)||(22309749-22309815)
chr2 (41-110)||(10446830-10446899)
chr2 (1-109)||(28599511-28599619)
chr2 (41-108)||(1150254-1150321)
chr2 (41-108)||(16366963-16367030)
chr2 (41-108)||(32519155-32519222)
chr2 (40-110)||(20911445-20911515)
chr2 (1-105)||(4375633-4375737)
chr2 (41-108)||(17284743-17284810)
chr2 (41-108)||(22309431-22309498)
chr2 (41-108)||(32519472-32519539)
chr2 (41-108)||(41846392-41846459)
chr2 (3-109)||(17284821-17284927)
chr2 (41-97)||(16367280-16367336)
chr2 (41-105)||(18476910-18476974)
chr2 (41-105)||(19606920-19606984)
chr2 (44-108)||(22731852-22731916)
chr2 (41-105)||(28599430-28599494)
chr2 (40-108)||(43681856-43681924)
chr2 (41-108)||(4375868-4375935)
chr2 (41-112)||(5608911-5608982)
chr2 (41-110)||(17285052-17285121)
chr2 (41-110)||(28599744-28599813)
chr2 (41-110)||(45663825-45663894)
chr2 (41-105)||(8089767-8089831)
chr2 (41-105)||(9959142-9959206)
chr2 (41-108)||(17580641-17580709)
chr2 (41-108)||(17366626-17366693)
chr2 (41-108)||(24607914-24607981)
chr2 (24-94)||(37984834-37984904)
chr2 (41-105)||(8089455-8089519)
chr2 (42-109)||(9958825-9958891)
chr2 (41-112)||(17580324-17580395)
chr2 (40-105)||(18477192-18477257)
chr2 (24-64)||(18477113-18477153)
chr2 (1-87)||(19607135-19607218)
chr2 (41-108)||(37985044-37985111)
chr2 (61-106)||(19607243-19607287)
chr2 (41-94)||(19620826-19620879)
chr2 (60-108)||(43682189-43682238)
chr2 (41-109)||(9693741-9693809)
chr2 (1-35)||(20911396-20911430)
chr2 (44-82)||(41846712-41846750)
chr2 (41-87)||(43236525-43236571)
chr2 (41-85)||(23206441-23206485)
chr2 (41-85)||(23678045-23678089)
chr2 (220-252)||(35413579-35413611)
[»] chr1 (91 HSPs)
chr1 (1-107)||(6056460-6056566)
chr1 (1-107)||(12577206-12577312)
chr1 (1-107)||(33347610-33347716)
chr1 (1-107)||(46364769-46364875)
chr1 (1-105)||(26953297-26953401)
chr1 (1-107)||(19755599-19755705)
chr1 (1-107)||(29042839-29042945)
chr1 (1-107)||(46849852-46849958)
chr1 (1-107)||(739303-739408)
chr1 (1-107)||(5183700-5183806)
chr1 (1-107)||(25415038-25415144)
chr1 (1-107)||(29980832-29980938)
chr1 (1-106)||(49003070-49003175)
chr1 (1-109)||(37152730-37152838)
chr1 (1-109)||(30830323-30830431)
chr1 (1-83)||(1040382-1040464)
chr1 (1-83)||(1047288-1047370)
chr1 (1-107)||(2953658-2953764)
chr1 (1-109)||(10019565-10019673)
chr1 (24-109)||(52454947-52455032)
chr1 (1-107)||(49989879-49989983)
chr1 (24-109)||(24701462-24701546)
chr1 (41-109)||(2953781-2953849)
chr1 (45-109)||(46849979-46850043)
chr1 (41-113)||(49003192-49003264)
chr1 (41-108)||(46364574-46364641)
chr1 (1-103)||(5926719-5926821)
chr1 (42-108)||(33030334-33030400)
chr1 (30-106)||(33030447-33030523)
chr1 (41-108)||(19755722-19755789)
chr1 (41-108)||(33347733-33347800)
chr1 (41-103)||(5926524-5926586)
chr1 (41-110)||(2953462-2953531)
chr1 (30-107)||(8890403-8890480)
chr1 (41-114)||(48380675-48380748)
chr1 (41-109)||(5926838-5926906)
chr1 (40-108)||(8890525-8890593)
chr1 (41-109)||(29043072-29043140)
chr1 (1-105)||(35312172-35312276)
chr1 (1-109)||(46544923-46545031)
chr1 (41-105)||(49002879-49002943)
chr1 (41-108)||(12577329-12577396)
chr1 (41-108)||(24701270-24701337)
chr1 (41-108)||(24701586-24701653)
chr1 (41-107)||(5183507-5183573)
chr1 (41-107)||(29980955-29981021)
chr1 (42-108)||(33347416-33347482)
chr1 (3-109)||(51933966-51934072)
chr1 (1-78)||(6334904-6334981)
chr1 (40-105)||(35311977-35312042)
chr1 (41-109)||(5183823-5183891)
chr1 (40-108)||(46544760-46544828)
chr1 (41-108)||(739219-739286)
chr1 (41-108)||(1047521-1047588)
chr1 (45-108)||(6056376-6056439)
chr1 (41-108)||(8890212-8890278)
chr1 (41-108)||(33030652-33030718)
chr1 (41-119)||(25414834-25414911)
chr1 (41-107)||(37152855-37152921)
chr1 (48-105)||(34176119-34176176)
chr1 (41-102)||(37152544-37152605)
chr1 (40-108)||(12577010-12577078)
chr1 (41-108)||(1040298-1040365)
chr1 (41-108)||(1047204-1047271)
chr1 (41-108)||(26953101-26953168)
chr1 (41-112)||(29980635-29980706)
chr1 (41-107)||(25415161-25415227)
chr1 (355-409)||(43713242-43713296)
chr1 (41-108)||(6056695-6056763)
chr1 (41-109)||(34175921-34175989)
chr1 (41-108)||(739535-739602)
chr1 (41-108)||(35312293-35312360)
chr1 (42-97)||(46849669-46849724)
chr1 (41-87)||(46545048-46545094)
chr1 (41-109)||(49990113-49990181)
chr1 (47-107)||(52454757-52454817)
chr1 (41-80)||(10019690-10019729)
chr1 (41-100)||(46364892-46364951)
chr1 (24-83)||(48380788-48380847)
chr1 (41-106)||(10019375-10019439)
chr1 (41-106)||(34176241-34176306)
chr1 (68-108)||(10019730-10019770)
chr1 (40-117)||(30830447-30830522)
chr1 (3-35)||(46849744-46849776)
chr1 (41-108)||(6334656-6334723)
chr1 (41-76)||(37152465-37152500)
chr1 (41-108)||(48381000-48381067)
chr1 (1-35)||(2953548-2953582)
chr1 (42-107)||(26953419-26953484)
chr1 (41-110)||(46282069-46282138)
chr1 (40-72)||(30830166-30830198)
[»] scaffold1493 (3 HSPs)
scaffold1493 (1-106)||(788-893)
scaffold1493 (41-108)||(910-977)
scaffold1493 (41-86)||(615-660)
[»] scaffold0321 (3 HSPs)
scaffold0321 (1-104)||(10746-10849)
scaffold0321 (41-108)||(10979-11046)
scaffold0321 (41-108)||(10662-10729)
[»] scaffold0279 (3 HSPs)
scaffold0279 (1-109)||(11049-11157)
scaffold0279 (41-108)||(10853-10920)
scaffold0279 (42-105)||(11175-11238)
[»] scaffold0201 (2 HSPs)
scaffold0201 (2-105)||(14089-14192)
scaffold0201 (41-108)||(13893-13960)
[»] scaffold0206 (2 HSPs)
scaffold0206 (1-108)||(10409-10516)
scaffold0206 (41-108)||(10325-10392)
[»] scaffold0233 (3 HSPs)
scaffold0233 (1-109)||(8517-8625)
scaffold0233 (41-106)||(8435-8500)
scaffold0233 (41-108)||(8749-8816)
[»] scaffold0022 (3 HSPs)
scaffold0022 (1-106)||(120283-120388)
scaffold0022 (60-105)||(120208-120253)
scaffold0022 (55-108)||(120529-120582)
[»] scaffold0202 (3 HSPs)
scaffold0202 (41-105)||(14238-14302)
scaffold0202 (41-108)||(14551-14618)
scaffold0202 (32-109)||(14350-14427)
[»] scaffold0251 (1 HSPs)
scaffold0251 (41-108)||(12019-12086)


Alignment Details
Target: chr6 (Bit Score: 91; Significance: 6e-44; HSPs: 66)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 23291828 - 23291934
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  23291828 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagaccta 23291927  T
Q  101 tttaagc 107  Q
    |||||||    
T  23291928 tttaagc 23291934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 13480292 - 13480398
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||    
T  13480292 gcaaatattaatcatttgacttttggtcctaattacatctaattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaaaaccta 13480391  T
Q  101 tttaagc 107  Q
    |||||||    
T  13480392 tttaagc 13480398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 20561227 - 20561121
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||| ||    
T  20561227 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggatgaaagacata 20561128  T
Q  101 tttaagc 107  Q
    |||||||    
T  20561127 tttaagc 20561121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 32337648 - 32337754
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||    
T  32337648 gcaaatattaatcatttgacttttgggcctaattacatctgattagtaacttcagagacgaaaattcaaatgacctatatttgcagggatgaaagaccta 32337747  T
Q  101 tttaagc 107  Q
    |||||||    
T  32337748 tttaagc 32337754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 5064635 - 5064530
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||    
T  5064635 gcaaatattaatcatttgacttttggtcctaattacatctaattagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaagaccta 5064536  T
Q  101 tttaag 106  Q
    ||||||    
T  5064535 tttaag 5064530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 21880664 - 21880558
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    ||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||     
T  21880664 gcaaatattaagcatttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagacctg 21880565  T
Q  101 tttaagc 107  Q
    |||||||    
T  21880564 tttaagc 21880558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 22493964 - 22494069
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||| ||    
T  22493964 gcaaatattaatcatttgacttttggtcctaattacatttgattagtaacttcagggacgaaaattcaaataacctatatttgcagggatgaaagactta 22494063  T
Q  101 tttaag 106  Q
    ||||||    
T  22494064 tttaag 22494069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 3586488 - 3586403
Alignment:
Q  24 tggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  3586488 tggtcataattacatctgattagtaactttagggacgaaaattcaaatgacctatatttgtagggacgaaagacctatttaagcca 3586403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 737992 - 737900
Alignment:
Q  6 tattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacc 98  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||    
T  737992 tattaatcatttgacttttggtcctaattacatctgattagtaacttcaggaatgaaaattcaaatgacctatatttgcagggacgaaagacc 737900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 26542730 - 26542809
Alignment:
Q  30 taattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  26542730 taattacatctgattagtaacttcagggacgaaaattcaaatgatctatatttgcagatacgaaagacctatttaagcca 26542809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 7612632 - 7612737
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| |||||||||||||||||||| | |||||||||||||||||||||| |||||||||||| ||||||||||||    
T  7612632 gcaaatattaatcatttgaaaaatggtcctaattacatctgattagtaattccagggacgaaaattcaaatgacttatatttgcagggacgaaagaccta 7612731  T
Q  101 tttaag 106  Q
    ||||||    
T  7612732 tttaag 7612737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 19296527 - 19296423
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||| |||||||    
T  19296527 gcaaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcatggatgaaaattcaaatgacctatatttgcagggacgatagaccta 19296428  T
Q  101 tttaa 105  Q
    |||||    
T  19296427 tttaa 19296423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 26503471 - 26503555
Alignment:
Q  24 tggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||| |||||||||||    
T  26503471 tggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagtgac-aaagacttatttaagcca 26503555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 15819807 - 15819874
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  15819807 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 15819874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 31879564 - 31879649
Alignment:
Q  24 tggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||    
T  31879564 tggtcctaattacatctgataattaacttcagggacgaaaattcaaatgacctatatttccaaagacgaaagacctatttaagcca 31879649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 738014 - 738082
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  738014 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcca 738082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 3299859 - 3299751
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||  ||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| |||||| |||||    
T  3299859 gcaaatattaatcatttgaaaaatggttctaattacatctgattagtaacttcatggatgaaaattcaaatgacctatgtttgcagggacgaaataccta 3299760  T
Q  101 tttaagcca 109  Q
    | |||||||    
T  3299759 tctaagcca 3299751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 21544584 - 21544516
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccat 110  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  21544584 attagtaacttcagagacgaaaattcaaatgacctatatttgcagggacgaaagatctatttaagccat 21544516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 23292061 - 23292129
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||    
T  23292061 gattagtaacttcagggacgaaaattcaaatgacctatatttgcatggacgaaagacatatttaagcca 23292129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 13480275 - 13480208
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  13480275 gattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcc 13480208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 16704626 - 16704693
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  16704626 gattagtaacttcaaggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagcc 16704693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 7612614 - 7612548
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  7612614 attagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaagcc 7612548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 21880431 - 21880362
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccat 110  Q
    ||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||| ||||||||||||    
T  21880431 gattagtaacttcagagacgaaaattcaaatgacttatatttacaggaacgaaagacatatttaagccat 21880362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 3299627 - 3299559
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  3299627 tgattagtaacttcatggacgaaaattcaaatgacttatatttgcagagacgaaagacctatttaagcc 3299559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 16706967 - 16707035
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||| |||||||    
T  16706967 tgattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggaccaaagacctaattaagcc 16707035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 20560996 - 20560928
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  20560996 tgattaataactacagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 20560928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 31386883 - 31386990
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    || || |||||||||||| |||||||||||||| | |||||||||||||||||||||||||| | || |||||||||    
T  31386883 gcaaatattaatcatttgaaaaatgatcctaattacatctggttagtaacttcagg-atgaaaattcaaatgacctatatttgcaaggacaaaagaccta 31386981  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  31386982 tttaagcca 31386990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 32337631 - 32337567
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||    
T  32337631 gattagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaa 32337567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 5064402 - 5064335
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||    
T  5064402 gattagtaacttcagggacgaaaattcaaatgacttatatttacagggacgaaagacatatttaagcc 5064335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 13480525 - 13480592
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| || | ||||||||| ||||||||||    
T  13480525 gattagtaacttcagggacgaaaattcaaatgacctatatttacaaggacgaaagacatatttaagcc 13480592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 32337888 - 32337950
Alignment:
Q  45 agtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  32337888 agtaacttcagggacgaaaattcaaatgacctatatttgcagg-acgaaagacatatttaagcc 32337950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 3299876 - 3299942
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||| || |||||||||    
T  3299876 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaatacatatttaagc 3299942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 20774399 - 20774465
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  20774399 attagtaacttcagagacgaaaatacaaatgacctatatttgcagagacgaaagacctatttaagcc 20774465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 20995008 - 20995077
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccat 110  Q
    |||||||||||||||||| ||||||||||||||| | |||||||||  ||||||||||||||||||||||    
T  20995008 gattagtaacttcagggatgaaaattcaaatgacttctatttgcagagacgaaagacctatttaagccat 20995077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 26542938 - 26543003
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    |||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||| ||||||    
T  26542938 attagtaacttcagagacgaaaactcaaatgacctatatttgcagggacgaaagacctaattaagc 26543003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 31879524 - 31879456
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccat 110  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  31879524 gattagtaacttcggggacgaaaattcaaatgacc-atatttgcagggacgaaagacctatttaaaccat 31879456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 1066439 - 1066331
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    | |||||||||| || |||||||||||||  |||| |||||||||||||||||||||||||| | |||||| ||||     
T  1066439 gcaaatattaatcatttgaaaaatagtcataattatatttgattagtaacttttgggatgaaaattcaaatgacctatatttgcaaggacgaaaaacctt 1066340  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  1066339 tttaagcca 1066331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 20774173 - 20774276
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| |||||||||||||||||||| |||| ||||||||||||||||||| |||||||| ||| |  |||||||||    
T  20774173 gcaaatattaatcatttgaaaaatggtcctaattacatctgattagtaatttcatggacgaaaattcaaatgacttatatttg-agggattaaagaccta 20774271  T
Q  101 tttaa 105  Q
    |||||    
T  20774272 tttaa 20774276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 20994886 - 20994818
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||||||||||| ||||||||||||||||| |||||||| |||| ||||||||| |||||||||||    
T  20994886 gattagtaacttcagagacgaaaattcaaatgaactatatttacagggacgaaagacatatttaagcca 20994818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 21880681 - 21880749
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    |||||||||||||||||||||||||||||||  | |||||||| ||| |||||||||||||||||||||    
T  21880681 gattagtaacttcagggacgaaaattcaaattgcatatatttggagggacgaaagacctatttaagcca 21880749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 3586278 - 3586212
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3586278 gattagcaactttagagacgaaaattcaaatgacctatatttgcagg-acgaaagacctatttaagcc 3586212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 19296545 - 19296608
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| | |||||||||||||||||    
T  19296545 attagtaacttcaggaacgaaaattcaaatgacatatatttgcaaggacgaaagacctatttaa 19296608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 26503671 - 26503738
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||||| |||||| |||||||||||||    
T  26503671 gattaataacttcatggacgaaaattcaaatgacttatatttgcagggacgaaaaacctatttaagcc 26503738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 30234909 - 30234976
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||| ||||||||||    
T  30234909 gattagtaacttcagggatgaaaattcaaacaacctatatttgcagggacgaaagacatatttaagcc 30234976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 9607633 - 9607687
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaag 95  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  9607633 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaag 9607687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 22494197 - 22494278
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataatttttataaat 123  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| || ||| || |||||||||| |  |||||||||||    
T  22494197 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggac-aaaaacatatttaagccttcttttttataaat 22494278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 23291811 - 23291745
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||| ||||||||| |||||||||    
T  23291811 gattagtaacttcagggatgaaaattcaaatggcctatatttgtagggacgaaagacatatttaagc 23291745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 31879776 - 31879842
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||| | |||||||||||||||||||||| ||| |||||||||||||| |||||    
T  31879776 attagtaacttcagggatgcaaattcaaatgacctatatttgtagggacgaaagacctattgaagcc 31879842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 5064652 - 5064716
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||  ||||||||| |||||||    
T  5064652 gattagtaacctcagggacgaaaattcaaatggcctatatttgcagagacgaaagacatatttaa 5064716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 8427267 - 8427199
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    |||||||||||| || ||||||||||||||||||||||||||||| | | ||||||| |||||||||||    
T  8427267 gattagtaacttgagagacgaaaattcaaatgacctatatttgcaaggatgaaagacatatttaagcca 8427199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 26542684 - 26542614
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttg--caggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   ||| |||||| |||||||||||||    
T  26542684 tgattagtaacttcagggacgaaaattcaaatgacatatatttgtaaagggacgaaaaacctatttaagcc 26542614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 22493948 - 22493907
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatattt 82  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  22493948 gattagtaacttcagggacgaaaattcaaatgacctatattt 22493907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 1066457 - 1066523
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    |||||||||||||||||||||||||||||||| |||||||| || | | |||| ||||||||||||||    
T  1066457 attagtaacttcagggacgaaaattcaaatgatctatatttacaag-atgaaaaacctatttaagcca 1066523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 7612866 - 7612931
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    |||| |||| |||||||||||||||||||||  | ||||||| |||| ||||||||||||||||||    
T  7612866 gattggtaatttcagggacgaaaattcaaatagcttatatttacaggcacgaaagacctatttaag 7612931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 18865187 - 18865112
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataattttt 117  Q
    |||||||||||| |  |||||||||||||||||| | |||||| ||| || ||||||||||||||||| ||||||||    
T  18865187 gattagtaactttatagacgaaaattcaaatgacttgtatttgtagggactaaagacctatttaagcc-taattttt 18865112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 20774156 - 20774092
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||| |||||||| ||||||||||||||||||| |||||||| | | | |||||||||||||||    
T  20774156 gattaataacttcaaggacgaaaattcaaatgacatatatttgtaaggatgaaagacctatttaa 20774092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 19039105 - 19039174
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    |||||||||||||||  |   ||||||||||| ||||||||||||||| || ||||| ||||||||||||    
T  19039105 tgattagtaacttcaaagtataaaattcaaataacctatatttgcagggactaaagatctatttaagcca 19039174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 20561244 - 20561307
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||| |||| ||| ||||||||||||||||||| ||||||| || | |||||||||||||||||    
T  20561244 gattaataacatcaaggacgaaaattcaaatgacatatatttacaag-acgaaagacctatttaa 20561307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 3586540 - 3586591
Alignment:
Q  56 ggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    ||||||||||||||||   ||||||||||||| ||||||||||| |||||||    
T  3586540 ggacgaaaattcaaatagtctatatttgcagggacgaaagacctgtttaagc 3586591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 72
Target Start/End: Complemental strand, 15819635 - 15819604
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatg 72  Q
    ||||||||||||||||||||||||||||||||    
T  15819635 gattagtaacttcagggacgaaaattcaaatg 15819604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 31386866 - 31386799
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||| ||||||| ||||||| ||||||||  ||||||||| |||| | |||| |||||||||||||    
T  31386866 gattagcaacttcaaggacgaatattcaaatatcctatatttacagggatgaaacacctatttaagcc 31386799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 1066205 - 1066143
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctattt 103  Q
    ||||| |||||| | ||||||||||||||||||||||||||| || | || |||||| |||||    
T  1066205 gattaataactttaaggacgaaaattcaaatgacctatatttacaaggacaaaagacttattt 1066143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 4175920 - 4175887
Alignment:
Q  219 agagattaattagaatagactgacagtgtaaaac 252  Q
    ||||||||||| ||||||||||||||||||||||    
T  4175920 agagattaatttgaatagactgacagtgtaaaac 4175887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 26500330 - 26500281
Alignment:
Q  56 ggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||| ||||||||||||||||| ||||||| | ||||| |||||||||||    
T  26500330 ggacaaaaattcaaatgacctagatttgcatggacgaatgacctatttaa 26500281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 15819641 - 15819681
Alignment:
Q  69 aatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||||||||||||||| | |||| ||||||||||||||    
T  15819641 aatgacctatatttgcagggatgaaaaacctatttaagcca 15819681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 31393501 - 31393561
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatt 102  Q
    ||||||||||||| | | ||||||| |||| | |||| |||||||| ||||||||||||||    
T  31393501 attagtaacttcatgaatgaaaattgaaataagctatgtttgcagggacgaaagacctatt 31393561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 6e-44; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 33735613 - 33735507
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  33735613 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagaccta 33735514  T
Q  101 tttaagc 107  Q
    |||||||    
T  33735513 tttaagc 33735507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 25253170 - 25253278
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||    
T  25253170 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggatgaaagaccta 25253269  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  25253270 tttaagcca 25253278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 6421922 - 6421819
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  6421922 gcaaatattaatcatttgacttttggtcctaagtacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagaccta 6421823  T
Q  101 ttta 104  Q
    ||||    
T  6421822 ttta 6421819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 18013696 - 18013802
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  18013696 gcaaatattaatcatttgacttttggttttaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagactta 18013795  T
Q  101 tttaagc 107  Q
    |||||||    
T  18013796 tttaagc 18013802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 32052524 - 32052418
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||| |||||    
T  32052524 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgaactatatttgcagggatgaaaaaccta 32052425  T
Q  101 tttaagc 107  Q
    |||||||    
T  32052424 tttaagc 32052418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 25316960 - 25317069
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgca-ggaacgaaagacct 99  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||  |||||||||    
T  25316960 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggatagaaagacct 25317059  T
Q  100 atttaagcca 109  Q
    ||||||||||    
T  25317060 atttaagcca 25317069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 37945078 - 37945184
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||| | ||||||||||    
T  37945078 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcatggacgaaaattcaattgatctatatttgcagggatgaaagaccta 37945177  T
Q  101 tttaagc 107  Q
    |||||||    
T  37945178 tttaagc 37945184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 22533690 - 22533582
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  22533690 gcaaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctaaatttgcagggacgaaagaccta 22533591  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  22533590 tttaagcca 22533582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 18934797 - 18934905
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||||||||||||    |||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| |||| |||||| |||||    
T  18934797 gcaaatattagtcatttgaaaaatggtcataattacaactgattagtaacttccgggatgaaaattcaaatgacctatatttacagggacgaaataccta 18934896  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  18934897 tttaagcca 18934905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 27753779 - 27753671
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    | ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  27753779 gcaaatattaatcatttgaaaaatagtcctaattacatctgattagtaactttagggacgaaaattcaaatgacctatatttgcagggacgaaagacata 27753680  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  27753679 tttaagcca 27753671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 16118228 - 16118143
Alignment:
Q  24 tggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||| ||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16118228 tggtcctaattacatatgattagtaactttagagacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcca 16118143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 34404567 - 34404676
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacg-aaaattcaaatgacctatatttgcaggaacgaaagacct 99  Q
    |||||||||| ||||||||    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| | ||||||||| |    
T  34404567 gcaaatattaatcatttgaaaaatggtcataattacatctgattagtaacttcatggacggaaaattcaaatgacctatatttgcaaggacgaaagactt 34404666  T
Q  100 atttaagcca 109  Q
    ||||||||||    
T  34404667 atttaagcca 34404676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 12990902 - 12990978
Alignment:
Q  31 aattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  12990902 aattacatctgattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 12990978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 13064523 - 13064599
Alignment:
Q  31 aattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  13064523 aattacatctgattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagc 13064599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 22024170 - 22024062
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| |||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  22024170 gcaaatattaatcatttgaaaaatggtcctaattacatcggataagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagaccta 22024071  T
Q  101 tttaagcca 109  Q
    | |||||||    
T  22024070 tataagcca 22024062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 8323166 - 8323245
Alignment:
Q  27 tcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| || ||||||||||||||||||    
T  8323166 tcataattacatctgattagtaacttcagggacaaaaattcaaatggcctatatttgctgggacgaaagacctatttaag 8323245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 33735630 - 33735697
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33735630 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 33735697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 34404551 - 34404484
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34404551 gattagtaacttcagtgacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 34404484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 21260949 - 21261054
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    || ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || |||||| ||    
T  21260949 gcaaatattaatcatttgaaaaatgatcataattacatctgattaataacttcaggaacgaaaattcaaatgacctatatttgcagggacaaaagacata 21261048  T
Q  101 tttaag 106  Q
    ||||||    
T  21261049 tttaag 21261054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 14745515 - 14745448
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14745515 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 14745448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 25253403 - 25253470
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  25253403 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 25253470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 25317194 - 25317261
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  25317194 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 25317261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 32052541 - 32052608
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  32052541 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 32052608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 21260932 - 21260866
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  21260932 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagaactatttaagc 21260866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 41339653 - 41339549
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||    
T  41339653 gcaaatattaatcatttgaaaaatggtcctaattacat-tgactagtaacttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacata 41339555  T
Q  101 tttaag 106  Q
    ||||||    
T  41339554 tttaag 41339549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 7015809 - 7015701
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    | ||| ||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||| || |||||||||    
T  7015809 gcaaatattaatcatttgaaaaatagtcctaattacatctgattagtaactttagggatgaaaattcaaatgatatatatttgcagggacaaaagaccta 7015710  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  7015709 tttaagcca 7015701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 37945061 - 37944994
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||    
T  37945061 gattagtaacttcagggacgaaaattcaaatgacctatatttacaaggacgaaagacctatttaagcc 37944994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 7015826 - 7015895
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccat 110  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| | ||||||||||||||||||||||    
T  7015826 gattagtaacttcagggacgaaaattcaaacgacttatatttgcaaggacgaaagacctatttaagccat 7015895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 12991105 - 12991174
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccat 110  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||| ||||||||||||    
T  12991105 gattagtaacttcagagacgaaaattcaaatgacatatatttgcagggacgaaagacatatttaagccat 12991174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 7015576 - 7015508
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  7015576 tgattagtaacttcatggatgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagcc 7015508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 16118028 - 16117964
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  16118028 gattagtaacttcagggacgaaaattcaaatgacctatatttacagggacaaaagacctatttaa 16117964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 22533458 - 22533390
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||    
T  22533458 tgattaataacttcagggacgaaaattcaaatgacctatatttgcaagggcgaaagacctatttaagcc 22533390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 32052291 - 32052224
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||| || ||||||||||    
T  32052291 gattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaaaacatatttaagcc 32052224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 37945311 - 37945377
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||    
T  37945311 gattagtaacttcagggacgaaaattcaa-tgacctatatttgcagggacgaaagacatatttaagcc 37945377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 122
Target Start/End: Original strand, 147422 - 147503
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataatttttataaa 122  Q
    |||||||||| ||||||||| |||||| |||||| |||||||||||||||||||||| ||||||||||| ||| |||||||||    
T  147422 tgattagtaatttcagggacaaaaatttaaatgatctatatttgcaggaacgaaagagctatttaagcc-taagttttataaa 147503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 25253153 - 25253087
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||| |||||||||    
T  25253153 gattagtaacttcagggacgaaaattcaaatgaactatatttgcagggatgaaagacatatttaagc 25253087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 25316943 - 25316877
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||| |||||||||    
T  25316943 gattagtaacttcagggacgaaaattcaaatgaactatatttgcagggatgaaagacatatttaagc 25316877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 13064726 - 13064795
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccat 110  Q
    |||||||||||| || |||||||||||||||||| |||||||||||| ||||||||| ||||||||||||    
T  13064726 gattagtaactttagagacgaaaattcaaatgacatatatttgcagggacgaaagacatatttaagccat 13064795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 6421939 - 6422003
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  6421939 gattagtaatttcagggacgaaaattcaaatgacttatatttgcaggggcgaaagacctatttaa 6422003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 22533707 - 22533771
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | ||||||||    
T  22533707 gattagtaacttcggggacgaaaattcaaatgacctatatttgcagggacgaaaaagctatttaa 22533771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 31119019 - 31118955
Alignment:
Q  44 tagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| |||||||| |||||||||||    
T  31119019 tagtaacttcagggatgaaaattcaaatggcctatatttgcagggacgaaagatctatttaagcc 31118955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 22024187 - 22024254
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||| || ||||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  22024187 gattagtaacttaagtgacgaaaattcaaatgacctatatttgcagagacgaaagacgtatttaagcc 22024254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 8323374 - 8323444
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataa 112  Q
    ||||||||||||| ||||||||||||||||  | ||||||||||||  |||||||||||||||||||||||    
T  8323374 attagtaacttcaaggacgaaaattcaaatagcatatatttgcaggggcgaaagacctatttaagccataa 8323444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 12628328 - 12628394
Alignment:
Q  30 taattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaaga 96  Q
    ||||||||||| |||||||||||||||||||||||||||||| || |||||||||| | ||||||||    
T  12628328 taattacatcttattagtaacttcagggacgaaaattcaaatcacttatatttgcatggacgaaaga 12628394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 18934780 - 18934714
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||| | ||||||| |||||||||    
T  18934780 gattagtaacttcatggacgaaaattcaaatgacttatatttgcagggatgaaagacatatttaagc 18934714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 27753545 - 27753480
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| ||||||    
T  27753545 gattagtaacttcatggacgaaaattcaa-tgacctatatttgcagggacgaaagacctacttaagc 27753480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 41339669 - 41339743
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataatt 114  Q
    ||||||||||||| | ||||||||||||||||||||||||||| || ||||||| ||| |||||||| |||||||    
T  41339669 tgattagtaactttatggacgaaaattcaaatgacctatatttacaagaacgaatgacatatttaagtcataatt 41339743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 6421689 - 6421625
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||||||||||||| |||| |||||||||||||| |||||||||||| ||||||||| |||||||    
T  6421689 gattagtaacttcaaggacaaaaattcaaatgacatatatttgcagggacgaaagacatatttaa 6421625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 8323123 - 8323059
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||||||||||||| |||||||||||||||||||||||||||  ||| | |||||||||||||||    
T  8323123 gattagtaacttcatggacgaaaattcaaatgacctatatttatagggatgaaagacctatttaa 8323059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 14745532 - 14745583
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaactt 52  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  14745532 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaactt 14745583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 33735380 - 33735313
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||| |||||||||||||| ||||||| |||||||||| ||| ||||||||| ||||||||||    
T  33735380 gattagtaatttcagggacgaaaaatcaaatggcctatatttgtagggacgaaagacatatttaagcc 33735313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 9915482 - 9915428
Alignment:
Q  57 gacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccata 111  Q
    ||||||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  9915482 gacgaaaattcaaatgacctatatttatagggacgaaagacctatttaagccata 9915428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 111
Target Start/End: Original strand, 21261180 - 21261250
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccata 111  Q
    ||||| |||||||| ||| ||||| ||||| ||||||| |||||||||||||||||| |||||||||||||    
T  21261180 gattaataacttcatggatgaaaactcaaaggacctatctttgcaggaacgaaagacatatttaagccata 21261250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 14745630 - 14745686
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagac 97  Q
    ||||||||||||||| |||||||||||||||| |||||||||| ||| |||||||||    
T  14745630 gattagtaacttcagcgacgaaaattcaaatggcctatatttgtagggacgaaagac 14745686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 16118268 - 16118336
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    |||||||| ||| ||||||||||||||||| | | |||||||||||| | |||||||||||||||||||    
T  16118268 gattagtatctttagggacgaaaattcaaacggcttatatttgcagggatgaaagacctatttaagcca 16118336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 41339421 - 41339357
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| ||||| |||||  |||||||    
T  41339421 gattagcaacttcagggacgaaaattcaaatgacttatatttgccggaactaaagatttatttaa 41339357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 18935031 - 18935094
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||| ||||||||||||||| |||||||||||||||| |||| || ||| ||||||||||    
T  18935031 gattagtaatttcagggacgaaaat-caaatgacctatatttacagggacaaaaaacctatttaa 18935094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 20705029 - 20705096
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacc--tatatttgcaggaacgaaagacctatttaag 106  Q
    ||||||||||||||  |||||||||||||||||||  ||||||| |||| ||||||||| ||||||||    
T  20705029 gattagtaacttcaaagacgaaaattcaaatgacctatatatttacagggacgaaagacatatttaag 20705096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 12628318 - 12628263
Alignment:
Q  51 ttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    |||| ||||||||||||||||||||||||||| || | ||||| ||||||||||||    
T  12628318 ttcaaggacgaaaattcaaatgacctatatttacatggacgaaggacctatttaag 12628263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20704821 - 20704872
Alignment:
Q  1 gcaaatattagtcatttgactttt-ggtcataattacatctgattagtaact 51  Q
    |||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  20704821 gcaaatattaatcatttgactttttggtcataattatatctgattagtaact 20704872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 18013679 - 18013639
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatt 81  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  18013679 gattagtaacttcactgacgaaaattcaaatgacctatatt 18013639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 18013929 - 18013984
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagac 97  Q
    |||| ||||||||||| ||||||||| ||||| |||||||||||||| |||||||||    
T  18013929 gattggtaacttcagg-acgaaaatttaaatggcctatatttgcagggacgaaagac 18013984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 251
Target Start/End: Original strand, 2413205 - 2413243
Alignment:
Q  213 atattaagagattaattagaatagactgacagtgtaaaa 251  Q
    |||||| || |||||||||||||||||||||||||||||    
T  2413205 atattatgaaattaattagaatagactgacagtgtaaaa 2413243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 251
Target Start/End: Complemental strand, 2414445 - 2414411
Alignment:
Q  217 taagagattaattagaatagactgacagtgtaaaa 251  Q
    |||||||||||||| ||||||||||||||||||||    
T  2414445 taagagattaattataatagactgacagtgtaaaa 2414411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 20704804 - 20704740
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    ||||||||| ||||||||  |||||||||||||| ||||||| || ||||||||||  ||||||||    
T  20704804 gattagtaatttcagggataaaaattcaaatgacttatatttaca-gaacgaaagatatatttaag 20704740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 2e-43; HSPs: 81)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 25287876 - 25287981
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  25287876 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagaccta 25287975  T
Q  101 tttaag 106  Q
    ||||||    
T  25287976 tttaag 25287981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 37343082 - 37342976
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||    
T  37343082 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagaccta 37342983  T
Q  101 tttaagc 107  Q
    |||||||    
T  37342982 tttaagc 37342976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 40525591 - 40525697
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||    
T  40525591 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttacagggatgaaagaccta 40525690  T
Q  101 tttaagc 107  Q
    |||||||    
T  40525691 tttaagc 40525697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 7693 - 7587
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| | ||||| ||||    
T  7693 gcaaatattaatcatttgacttttggtcataattacatctgattagtgacttcagggacgaaaattcaaatgacctatatttacagggatgaaaggccta 7594  T
Q  101 tttaagc 107  Q
    |||||||    
T  7593 tttaagc 7587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 11478229 - 11478335
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||    
T  11478229 gcaaatattaatcatttgacttttggccctaattacatctgattagtaacttcagcgacgaaaattcaaatgacctatatttgcagggatgaaagaccta 11478328  T
Q  101 tttaagc 107  Q
    |||||||    
T  11478329 tttaagc 11478335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 20096104 - 20096210
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| | ||||||||||    
T  20096104 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggaagaaaattcaaatgacctatatttgtagggatgaaagaccta 20096203  T
Q  101 tttaagc 107  Q
    |||||||    
T  20096204 tttaagc 20096210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 23424596 - 23424702
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||    
T  23424596 gcaaatattaatcatttgacttttgatcctaattacatctgattagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaagaccta 23424695  T
Q  101 tttaagc 107  Q
    |||||||    
T  23424696 tttaagc 23424702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 29190459 - 29190353
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||    
T  29190459 gcaaatattaatcatttgacttttagtcctaattacatctgattagtaactttagggacgaaaattcaaatgacctatatttgcagggatgaaagaccta 29190360  T
Q  101 tttaagc 107  Q
    |||||||    
T  29190359 tttaagc 29190353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 36623653 - 36623551
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||    
T  36623653 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagaccta 36623554  T
Q  101 ttt 103  Q
    |||    
T  36623553 ttt 36623551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 43866795 - 43866901
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||| ||    
T  43866795 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagactta 43866894  T
Q  101 tttaagc 107  Q
    |||||||    
T  43866895 tttaagc 43866901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 547734 - 547629
Alignment:
Q  2 caaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctat 101  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| | |||||||||||    
T  547734 caaatattaatcatttgacttttggtcctaattacatctgattagtaacttcaaggacgaaaattcaaatgacctataattgcagggatgaaagacctat 547635  T
Q  102 ttaagc 107  Q
    ||||||    
T  547634 ttaagc 547629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 41251208 - 41251313
Alignment:
Q  2 caaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctat 101  Q
    ||||||||| |||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||    
T  41251208 caaatattaatcatttgacttttggtcataattacacctgtttagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctat 41251307  T
Q  102 ttaagc 107  Q
    ||||||    
T  41251308 ttaagc 41251313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 40422460 - 40422353
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  40422460 gcaaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggac-aaagaccta 40422362  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  40422361 tttaagcca 40422353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 26739801 - 26739906
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| | | ||||||||||    
T  26739801 gcaaatattaatcatttgacgtttggtcctaattacatctgattaggaacttcagggacg-aaattcaaatgacctatatttgcaaggatgaaagaccta 26739899  T
Q  101 tttaagc 107  Q
    |||||||    
T  26739900 tttaagc 26739906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 15716175 - 15716072
Alignment:
Q  2 caaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctat 101  Q
    ||||||||| ||||||||    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |  ||||||||||    
T  15716175 caaatattaatcatttgaaaaatggtcataattacatctgattagtaacttcagagacgaaaattcaaatgacctatatttgcagggataaaagacctat 15716076  T
Q  102 ttaa 105  Q
    ||||    
T  15716075 ttaa 15716072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 23424828 - 23424905
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataattttt 117  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||    
T  23424828 tgattagtaacttcagggacgaaaattcaaatggcctatatttgcaggaacgaaagacatatttaagccattattttt 23424905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 41802116 - 41802011
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||  ||||||||| |||| || |||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| | ||||||||||    
T  41802116 gcaaatatttatcatttgacatttgatcctaattacatctgattattagcttcagggacgaaaattcaaatggcctatatttgcagggatgaaagaccta 41802017  T
Q  101 tttaag 106  Q
    ||||||    
T  41802016 tttaag 41802011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 31690008 - 31690084
Alignment:
Q  30 taattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||    
T  31690008 taattacatctgattagtaacttcagggacgaaaattcaaatgacctatattttcagggacgaaaaacctatttaag 31690084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 27856826 - 27856932
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||| |||||| |||||| | |||||| |||||||||||  |||||||||||| | ||||||||||    
T  27856826 gcaaatattaatcatttgacttttggtcttaattacatttgattactaactttatggacgataattcaaatgatttatatttgcagggatgaaagaccta 27856925  T
Q  101 tttaagc 107  Q
    |||||||    
T  27856926 tttaagc 27856932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 24529973 - 24530042
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccat 110  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24529973 gattagtaacttcagtaacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccat 24530042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 41182018 - 41182086
Alignment:
Q  39 ctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41182018 ctgaatagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagc 41182086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 22763680 - 22763787
Alignment:
Q  2 caaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctat 101  Q
    ||||||||| ||||||||    ||||| |||||| |||||||||||||||||||||||||||||||||||  |  ||||||||||| |||||||||||||    
T  22763680 caaatattaatcatttgaaaaatggtcctaattagatctgattagtaacttcagggacgaaaattcaaatagcagatatttgcagggacgaaagacctat 22763779  T
Q  102 ttaagcca 109  Q
    ||||||||    
T  22763780 ttaagcca 22763787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 37713780 - 37713887
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||| | ||||||||  ||    
T  37713780 gcaaatattaatcatttgaaaaatggtcctaattacatccgattagtaacttcagggacgaaaattcatatgacctatatttgcatggacgaaagatata 37713879  T
Q  101 tttaagcc 108  Q
    ||||||||    
T  37713880 tttaagcc 37713887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 40422477 - 40422544
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  40422477 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcc 40422544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 40525574 - 40525507
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  40525574 gattagtaacttcagggacgaaaattcaaatgacatatatttgcaggaacgaaagacttatttaagcc 40525507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 35163775 - 35163694
Alignment:
Q  28 cataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||  ||| ||||||||| |||||||||||    
T  35163775 cataattacatctgattagtaacttcagttacgaaaattcaaatgacctatatttatagggacgaaagacttatttaagcca 35163694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 9632395 - 9632327
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||    
T  9632395 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggacaaaagacctatttaagcca 9632327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 38619865 - 38619805
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctat 101  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  38619865 gattagtaacttcagggacgaaaattcaaatgatctatatttgcaggaacgaaagacctat 38619805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 41182212 - 41182280
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||    
T  41182212 tgattagtaacttcagggacgaaaattcaaatgacatatatttgcagggacgaaagacatatttaagcc 41182280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 7710 - 7777
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  7710 gattagtaacttcatggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagcc 7777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 9632441 - 9632520
Alignment:
Q  30 taattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    |||||||||||||||||||||||||| ||||||||||||||||  ||| ||||||||| ||||||||||| |||||||||    
T  9632441 taattacatctgattagtaacttcagtgacgaaaattcaaatggtctagatttgcagggacgaaagacctgtttaagcca 9632520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 9632620 - 9632687
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  9632620 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacaaaagacctatttaagcc 9632687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 11478212 - 11478145
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  11478212 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaaaacctatttaagcc 11478145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 41251190 - 41251123
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  41251190 gattagtaacttcagagacgaaaattcaattgacctatatttgcagggacgaaagacctatttaagcc 41251123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 22763662 - 22763596
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  22763662 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggacgaaatacctatttaagc 22763596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 26740035 - 26740101
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  26740035 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 26740101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 13566494 - 13566599
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    |||| ||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||  | |||||||| |    
T  13566494 gcaaatattaatcatttgaaaaatggttataattacatctgattagtaaattcaaggacgaaaattcaaatgacctgtatttgcagtgatgaaagaccaa 13566593  T
Q  101 tttaag 106  Q
    ||||||    
T  13566594 tttaag 13566599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 40 - 105
Target Start/End: Original strand, 27857058 - 27857123
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||    
T  27857058 tgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaa 27857123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 547752 - 547820
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||    
T  547752 gattagtaactttagggacgaaaattcaaatgatctatatttgcagggacgaaagatctatttaagcca 547820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 20096087 - 20096023
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||    
T  20096087 gattagtaacttcagggacaaaaattcaaatgacatatatttgcagggacgaaagacctatttaa 20096023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 38600267 - 38600335
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||  |||||||||||||    
T  38600267 gattagtaacttcagggacgaaatttcaaatgacctatatttgcagggacgaaatgcctatttaagcca 38600335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 7459 - 7396
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||    
T  7459 attagtaacttcagggaagaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 7396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 23424578 - 23424511
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    |||||||||||||||||| |||||||||||||||||||||| |||| | |||||||||||||||||||    
T  23424578 attagtaacttcagggacaaaaattcaaatgacctatatttacagggatgaaagacctatttaagcca 23424511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 36623419 - 36623352
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||| || ||||||||||    
T  36623419 gattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaaaacatatttaagcc 36623352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 40422227 - 40422160
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||| ||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  40422227 gattagttacttcagagacgaaaattcatatgacctatatttgcagggacgaaagacctatttaagcc 40422160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 36623671 - 36623737
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||| |||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  36623671 attagtaatttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcc 36623737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 43866777 - 43866711
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||| |||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  43866777 attagtaatttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcc 43866711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 15716193 - 15716258
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| | ||||||||||||||||||    
T  15716193 gattagtaacttcagggacgaaaatttaaatgacatatatttgcatggacgaaagacctatttaag 15716258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 41801883 - 41801818
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||| || ||||||||    
T  41801883 gattagtaacttcaggaacgaaaattcaaatgacctatatttgcagggacgaaaaacatatttaag 41801818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 20096341 - 20096397
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagac 97  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  20096341 gattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagac 20096397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 23514105 - 23514213
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| |||||||||| |||||||| ||||| ||||||||||||||||   |||||||| |||| |||||||| |||    
T  23514105 gcaaatattaatcatttgaaaaatggtcctaattacatcagattagtagcttcatggacgaaaattcaaatagtctatatttacagggacgaaagaacta 23514204  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  23514205 tttaagcca 23514213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 37343100 - 37343164
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    |||||||| |||||||||||||||||||||||||||||||||||||  |||||||| ||||||||    
T  37343100 attagtaatttcagggacgaaaattcaaatgacctatatttgcaggggcgaaagacatatttaag 37343164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 25287859 - 25287792
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||| || |||||| |||| ||||||||| ||||||||||    
T  25287859 gattagtaacttcagggacgaaaattcaaatggccaatatttacagggacgaaagacatatttaagcc 25287792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 547497 - 547422
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataattttt 117  Q
    ||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||| | |||||||||||| ||||||    
T  547497 gattagtaacttcagggacaaaaatttaaatggcctatatttgcagggacgaaag-catatttaagccattattttt 547422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 27436630 - 27436562
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| | ||||  | |||||||||||    
T  27436630 gattagtaacttcagggacgaaaattcaaacgacctatatttgcagggatgaaatgcatatttaagcca 27436562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 43867028 - 43867096
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||| |||||| || |||||||||||    
T  43867028 gattagtaacttcatggacgaaaattcaaatggtctatatttgcagggacgaaaaacatatttaagcca 43867096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 31689962 - 31689895
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||| ||||||||| |||||||||||||||||  ||||||||||||| || |||||||||||||||||    
T  31689962 gattggtaacttcatggacgaaaattcaaatggtctatatttgcagggacaaaagacctatttaagcc 31689895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 31690212 - 31690282
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccata 111  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||| |||||| || |||||||| ||||    
T  31690212 tgattagtaacttcagggacgaaaattc-aatgacctatatttacagggacgaaatacatatttaagtcata 31690282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 40933288 - 40933363
Alignment:
Q  30 taattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||| |||||||||| |||||  || |||||||||||||||||||||| |||  |||||||||||||||||    
T  40933288 taattacatttgattagtaatttcagaaacaaaaattcaaatgacctatatttacagagacgaaagacctatttaa 40933363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 27437552 - 27437620
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    |||||||||||||||||||||||||||||| | |||||||||||||| | ||||  | |||||||||||    
T  27437552 gattagtaacttcagggacgaaaattcaaacggcctatatttgcagggatgaaatgcatatttaagcca 27437620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 29190476 - 29190540
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||| ||  ||||||||||||  ||||||||||||| |||||||||||||||||    
T  29190476 gattagtaacttcagagataaaaattcaaatggtctatatttgcagggacgaaagacctatttaa 29190540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 35163560 - 35163500
Alignment:
Q  45 agtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||||||||| ||||||||||||||||| | |||||||||||| | |||||||||||||||    
T  35163560 agtaacttcaaggacgaaaattcaaatggcttatatttgcagggatgaaagacctatttaa 35163500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 40525823 - 40525891
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||| ||||||||||||||||||||| |||||||||| |||| ||| ||||  ||||||||||    
T  40525823 tgattagtaatttcagggacgaaaattcaaataacctatatttacagggacggaagatatatttaagcc 40525891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 109
Target Start/End: Original strand, 24529798 - 24529868
Alignment:
Q  38 tctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    |||||||||||||||| || ||||||||||||||||| ||||||||||   || ||||||||||||||||||    
T  24529798 tctgattagtaacttctgg-acgaaaattcaaatgacttatatttgcaaagacaaaagacctatttaagcca 24529868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 29190227 - 29190160
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||| |||||||||||| ||| |||||||||||||| | ||||||  ||||||||||    
T  29190227 gattagtaacttcagagacgaaaattcagatggcctatatttgcagggaggaaagatatatttaagcc 29190160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 37713762 - 37713699
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||| |||||||| ||||||||||||||||||| |||||||  ||| |||||||||||||||||    
T  37713762 attaataacttcatggacgaaaattcaaatgacttatatttatagggacgaaagacctatttaa 37713699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 41802163 - 41802203
Alignment:
Q  76 tatatttgcaggaacgaaagacctatttaagccataatttt 116  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  41802163 tatatttgcaggaacgaaagacctatttaagcgataatttt 41802203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 23514088 - 23514021
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||| | || ||||||||||||||| || |||||||||  ||||||||| ||||||||||    
T  23514088 gattagtaactttaaggtcgaaaattcaaatgaactttatttgcagagacgaaagacttatttaagcc 23514021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 37342849 - 37342782
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||| |||||||||||||||  || |||||||||| |||||| |  ||||||||||    
T  37342849 gattagtaacttcaggaacgaaaattcaaatggtctgtatttgcagggacgaaaaagatatttaagcc 37342782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 13566471 - 13566413
Alignment:
Q  47 taacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||| ||| ||||||||||||  || |||||||||| |||||||||||||||||    
T  13566471 taacttcagagacaaaaattcaaatgtactgtatttgcagggacgaaagacctatttaa 13566413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 26739784 - 26739714
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacct-----atatttgcaggaacgaaagacctatttaag 106  Q
    ||||||||| ||||||||||||||||||||||| ||     |||||| |||| ||||||||||||||||||    
T  26739784 gattagtaatttcagggacgaaaattcaaatgatctgatctatatttacagggacgaaagacctatttaag 26739714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 105
Target Start/End: Original strand, 41251442 - 41251507
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||| ||||| |||||||||||   |||||||||||| ||||||||  |||||||    
T  41251442 tgattagtaacttcatggacggaaattcaaatggtttatatttgcagggacgaaagatatatttaa 41251507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 11478462 - 11478510
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaa 89  Q
    ||||||||||||||||||||||| ||||||||  |||||||| ||||||    
T  11478462 gattagtaacttcagggacgaaagttcaaatggtctatatttacaggaa 11478510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 22763913 - 22763977
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||| ||||||||||||||||   ||||  |||||| |||||||| ||||||||    
T  22763913 gattagtaacttcagagacgaaaattcaaatggtttatagctgcagggacgaaagatctatttaa 22763977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 7393178 - 7393245
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||| |||||||| ||||| |||||||||||||| ||||||| | ||||   |||||||||||    
T  7393178 gattagtaagttcagggatgaaaaatcaaatgacctataattgcagggatgaaatgtctatttaagcc 7393245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 29574809 - 29574763
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagg 87  Q
    ||||||||| || ||||| |||| |||||||||||||||||||||||    
T  29574809 gattagtaagtttagggatgaaatttcaaatgacctatatttgcagg 29574763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 40933234 - 40933180
Alignment:
Q  51 ttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||| ||||||||||||||| || |||||||||||  || ||||||||||||||    
T  40933234 ttcagagacgaaaattcaaataacttatatttgcagagacaaaagacctatttaa 40933180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 41251426 - 41251392
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataatta 35  Q
    |||||||||| ||||||||||||||||||||||||    
T  41251426 gcaaatattaatcatttgacttttggtcataatta 41251392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 7478 - 7511
Alignment:
Q  2 caaatattagtcatttgacttttggtcataatta 35  Q
    ||||||||| ||||||||||||||||||||||||    
T  7478 caaatattaatcatttgacttttggtcataatta 7511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 25288109 - 25288154
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcag 86  Q
    ||||||||| |||||||| ||||| |||||||||||||| ||||||    
T  25288109 gattagtaagttcagggatgaaaaatcaaatgacctataattgcag 25288154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 41182009 - 41181973
Alignment:
Q  72 gacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||| | ||||||||||||||||||    
T  41182009 gacctatatttgcagggatgaaagacctatttaagcc 41181973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 34454780 - 34454674
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  34454780 gcaaatattaatcatttgacttttggttctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagaccta 34454681  T
Q  101 tttaagc 107  Q
    |||||||    
T  34454680 tttaagc 34454674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 12929554 - 12929449
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||    
T  12929554 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagaccta 12929455  T
Q  101 tttaag 106  Q
    ||||||    
T  12929454 tttaag 12929449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 26825930 - 26825824
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||    
T  26825930 gcaaatattaatcatttgacttttggttataattatatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaataccta 26825831  T
Q  101 tttaagc 107  Q
    |||||||    
T  26825830 tttaagc 26825824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 12931038 - 12930933
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| | |||| |||||    
T  12931038 gcaaatattaatcatttgacttttggtcctaattacatctgattagaaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaacaccta 12930939  T
Q  101 tttaag 106  Q
    ||||||    
T  12930938 tttaag 12930933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 27557932 - 27558040
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  27557932 gcaaatattaatcatttgaaaaatggtcttaattacatctgattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagaccta 27558031  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  27558032 tttaagcca 27558040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 37563654 - 37563548
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| || |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||| ||    
T  37563654 gcaaatattaatcttttgacttttggtcctaatcacatctgattagtaacttcagggacgaaaattcaaatgccctatatttgcagggatgaaagactta 37563555  T
Q  101 tttaagc 107  Q
    |||||||    
T  37563554 tttaagc 37563548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 43938194 - 43938088
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| | |||| | |||    
T  43938194 gcaaatattaatcatttgacttttggtcctaattacatatgattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaatatcta 43938095  T
Q  101 tttaagc 107  Q
    |||||||    
T  43938094 tttaagc 43938088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 15828021 - 15827913
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||    
T  15828021 gcaaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacata 15827922  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  15827921 tttaagcca 15827913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 19980034 - 19980140
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| | | ||||||||||||    
T  19980034 gcaaatattaatcatttgaaaaatggtcataattacatctgattagtaacttcaaggacgaaaattcaaatgatctatatttggaaggacgaaagaccta 19980133  T
Q  101 tttaagc 107  Q
    |||||||    
T  19980134 tttaagc 19980140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 41 - 122
Target Start/End: Original strand, 5280588 - 5280669
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataatttttataaa 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||| |||||    
T  5280588 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggacaaaagacctatttaagccataattttaataaa 5280669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 12928339 - 12928234
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||| | ||||||||||||||||  ||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||   ||||||||||    
T  12928339 gcaaatatcaatcatttgacttttggttctaattacatgtgattagtgacttcagggacgaaaattcaaatgacttatatttgcaggggtgaaagaccta 12928240  T
Q  101 tttaag 106  Q
    ||||||    
T  12928239 tttaag 12928234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 20947278 - 20947382
Alignment:
Q  2 caaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctat 101  Q
    ||||||||| ||||||||    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||| | ||||    
T  20947278 caaatattaatcatttgaaaaatggtcataattacatctgattagtaacttcaaggacgaaaattcaaatgacctatatttgaagggacgaaatatctat 20947377  T
Q  102 ttaag 106  Q
    |||||    
T  20947378 ttaag 20947382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 44545872 - 44545787
Alignment:
Q  24 tggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||| ||||||||||| ||||||||||| | | |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44545872 tggtcctaattacatctaattagtaacttaatgaacgaaaattcaaatgacctatatttgcaagaacgaaagacctatttaagcca 44545787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 47082118 - 47082043
Alignment:
Q  30 taattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||    
T  47082118 taattacatctgattaataacttcagggacgaaaattcaaatgaactatatttgcagggacgaaagacttatttaa 47082043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 47121385 - 47121469
Alignment:
Q  24 tggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  47121385 tggtcctaattacatttgattag-aacttcagggacgaaaattcaaatgacctatatttgcagggatgaaaggcctatttaagcca 47121469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 5636109 - 5636217
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||| |||||| ||| |    
T  5636109 gcaaatattaatcatttgaaaaatggtcctaattacatctaattagtaacttcagggacgaaaattcaaatgacttatatttgaagggacgaaaaaccga 5636208  T
Q  101 tttaagcca 109  Q
     ||||||||    
T  5636209 attaagcca 5636217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 26825698 - 26825630
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||    
T  26825698 tgattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagcc 26825630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 26825947 - 26826014
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26825947 gattaataacttcatggacgaaaattcaaatgacatatatttgcaggaacgaaagacctatttaagcc 26826014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 27558169 - 27558236
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27558169 gattagtaacttcgtggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 27558236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 45586648 - 45586572
Alignment:
Q  24 tggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctat 101  Q
    ||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||    
T  45586648 tggtcctaattacatatgattagtaacttcaaggacgaaaattcaaatgacctatatttgcagg-gcgaaagacctat 45586572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 20947260 - 20947196
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  20947260 gattagtaacttcatggacgaaaattcaaatgacctatatttgaagggacgaaagacctatttaa 20947196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 37563671 - 37563738
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||| ||||||||||    
T  37563671 gattagtaacttcagggacgaaaattcaaatggcctatatttacagggacgaaagacatatttaagcc 37563738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 25049478 - 25049544
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    ||||||||||||||||||  |||||||||||||||||||||| |||| |||||||||||||||||||    
T  25049478 gattagtaacttcagggagaaaaattcaaatgacctatatttacagggacgaaagacctatttaagc 25049544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 34454798 - 34454864
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| | ||||| ||||||||||||    
T  34454798 attagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaagtcctatttaagcc 34454864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 5280571 - 5280466
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| |||| ||||||||||||||| |||| |||||||||||||||||  ||||||| |  |||||||||||||||    
T  5280571 gcaaatattaatcatttgaaaaatggtcctaatcacatctgattagtaagttcaaggacgaaaattcaaatggtctatattcgttggaacgaaagaccta 5280472  T
Q  101 tttaag 106  Q
    ||||||    
T  5280471 tttaag 5280466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 5636342 - 5636406
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||||||||||||||||||| || |||||||||| | |||||||||||||||||    
T  5636342 gattagtaacttcagggacgaaaattcaaattacttatatttgcaaggacgaaagacctatttaa 5636406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 12931055 - 12931111
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagac 97  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  12931055 gattagtaacttcagggacgaaaattcaaatgaccaatatttgcagggacgaaagac 12931111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 34454551 - 34454479
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataat 113  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||    
T  34454551 gattagtaacttcaaagacgaaaattcaaatgacctatatttgcagggacgaaggacatatttaagccttaat 34454479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 42 - 106
Target Start/End: Complemental strand, 44545661 - 44545597
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    ||||||||||||||| |||||||||||||||||||||||||||||  || |||||||||||||||    
T  44545661 attagtaacttcaggaacgaaaattcaaatgacctatatttgcagagacaaaagacctatttaag 44545597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 44545912 - 44545976
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||||||||||||||||||||||||||||||||| | |||||||| | |||||||||||||||||    
T  44545912 gattagtaacttcagggacgaaaattcaaatgacttgtatttgcatggacgaaagacctatttaa 44545976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 5280339 - 5280272
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  5280339 gattagtaacttcagtaacgaaaattcaaatggcctatatttgcagggacgaaagacttatttaagcc 5280272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 5636093 - 5636027
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| || |||||||||||||    
T  5636093 gattagtaactttagggacgaaaattcaaatgacctatatttgcagggacg-aatacctatttaagcc 5636027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 12929571 - 12929638
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||| |||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  12929571 gattagtcacttcagggacggaaattcaaatgaccaatatttgcagggacgaaagacatatttaagcc 12929638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 37563421 - 37563354
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||| || |||||| ||||||||||    
T  37563421 gattagtaaattcagggacgaaaattcaaatggcctatatttgcagggacaaaagacatatttaagcc 37563354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 43937961 - 43937894
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||| ||||||||||||||||||||||| || | ||||||||| ||||||||||    
T  43937961 gattagtaacttcagggatgaaaattcaaatgacctatatttacaaggacgaaagacatatttaagcc 43937894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 43938211 - 43938278
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||| | |||||||||| | ||||||||| ||||||||||    
T  43938211 gattagtaacttcagggacgaaaattcaaatggcttatatttgcaaggacgaaagacatatttaagcc 43938278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 47081914 - 47081847
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||| || ||||||||||||||| |||||||| ||| ||||||||||||||||||||    
T  47081914 gattagtaacttcagagatgaaaattcaaatgacatatatttgaagggacgaaagacctatttaagcc 47081847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 12928356 - 12928422
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||| || ||||||||||||||||    
T  12928356 gattagtaacttcaaggacgaaaattcaaatggtctatatttgcagggacaaaagacctatttaagc 12928422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 47121596 - 47121661
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    |||||||||||||| ||||||||||||||||  | ||||||||||| |||||||||||||||||||    
T  47121596 attagtaacttcagagacgaaaattcaaatggtcaatatttgcagggacgaaagacctatttaagc 47121661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 7159245 - 7159312
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||| | ||| ||| ||||||||||    
T  7159245 gattagtaacttcaggaacgaaaattcaaatgatctatatttgcagggatgaatgacatatttaagcc 7159312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 12928104 - 12928037
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||| |||||||||||||||| || |||||||||||||  ||||||||| ||||||||||    
T  12928104 gattagtaactttagggacgaaaattcaagtggcctatatttgcagcgacgaaagacatatttaagcc 12928037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 27557914 - 27557851
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||| |||||||| ||||||||||||||||||||||||||| |||| ||||||||||| |||||    
T  27557914 attattaacttcaaggacgaaaattcaaatgacctatatttacagggacgaaagacctgtttaa 27557851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 105
Target Start/End: Original strand, 19980209 - 19980274
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||| |||| |||||||||||||| |||||||||||  | |||||||||||||||    
T  19980209 tgattagtaacttcaaggacaaaaattcaaatgacttatatttgcagtgatgaaagacctatttaa 19980274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 35262693 - 35262629
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctata-tttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||| ||| ||||||||||||| ||||| |||||||| |||||||||||||||||    
T  35262693 gattagtaacttcagagacaaaaattcaaatga-ctatattttgcagggacgaaagacctatttaa 35262629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 252
Target Start/End: Original strand, 3868180 - 3868211
Alignment:
Q  221 agattaattagaatagactgacagtgtaaaac 252  Q
    ||||||||||||||||||||||||||||||||    
T  3868180 agattaattagaatagactgacagtgtaaaac 3868211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 12930839 - 12930772
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||| |||||||| ||||| |||||||||||||| ||||||| | ||||  | ||||||||||    
T  12930839 gattagtaagttcagggatgaaaaatcaaatgacctataattgcagggatgaaatgcatatttaagcc 12930772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 20947511 - 20947577
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    ||||||||||||||  || |||||||||||| || |||||||||| | || |||||| |||||||||    
T  20947511 gattagtaacttcatagatgaaaattcaaataacttatatttgcaagcacaaaagacatatttaagc 20947577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 31695647 - 31695693
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagg 87  Q
    ||||||||| || ||||| |||| |||||||||||||||||||||||    
T  31695647 gattagtaagtttagggatgaaatttcaaatgacctatatttgcagg 31695693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 43937978 - 43938012
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataatta 35  Q
    |||||||||| ||||||||||||||||||||||||    
T  43937978 gcaaatattaatcatttgacttttggtcataatta 43938012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 15828058 - 15828115
Alignment:
Q  60 gaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataattttt 117  Q
    ||||||||||||||| |||||||||||  |||||||  |||||||| || ||||||||    
T  15828058 gaaaattcaaatgacttatatttgcagagacgaaagttctatttaaaccttaattttt 15828115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 36718243 - 36718276
Alignment:
Q  219 agagattaattagaatagactgacagtgtaaaac 252  Q
    ||||||||||||||||||||||||| ||||||||    
T  36718243 agagattaattagaatagactgacattgtaaaac 36718276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 19980018 - 19979979
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatat 80  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  19980018 tgattagtaacttcagg-atgaaaattcaaatgacctatat 19979979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 36719065 - 36719026
Alignment:
Q  212 aatattaagagattaattagaatagactgacagtgtaaaac 252  Q
    |||| ||||||||||||||||||||||||||| ||||||||    
T  36719065 aataataagagattaattagaatagactgaca-tgtaaaac 36719026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 1e-41; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 34238554 - 34238660
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||| |||||    
T  34238554 gcaaatattaatcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctaaatttgcagggatgaaaaaccta 34238653  T
Q  101 tttaagc 107  Q
    |||||||    
T  34238654 tttaagc 34238660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 53559471 - 53559577
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  53559471 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagaccta 53559570  T
Q  101 tttaagc 107  Q
    | |||||    
T  53559571 tgtaagc 53559577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 12691491 - 12691596
Alignment:
Q  2 caaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctat 101  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||    
T  12691491 caaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacttat 12691590  T
Q  102 ttaagc 107  Q
    ||||||    
T  12691591 ttaagc 12691596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 8287016 - 8287124
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8287016 gcaaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 8287115  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  8287116 tttaagcca 8287124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 20086737 - 20086631
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||    
T  20086737 gcaaatattaatcatttgactttttgtcctaattacatctgattagtaacttcagggacgaaaattcaaaggacctatatttgcagggatgaaagaccta 20086638  T
Q  101 tttaagc 107  Q
    |||||||    
T  20086637 tttaagc 20086631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 33294228 - 33294334
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||| ||    
T  33294228 gcaaatattaatcatttaacttttggtcataattacatctgattagtaacttccgggacgaaaattcaaatgacctatatttgcagggatgaaagacata 33294327  T
Q  101 tttaagc 107  Q
    |||||||    
T  33294328 tttaagc 33294334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 47862236 - 47862342
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    ||||||| || ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  47862236 gcaaatactaatcatttgactttttgtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagaccta 47862335  T
Q  101 tttaagc 107  Q
    |||||||    
T  47862336 tttaagc 47862342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 22250033 - 22249927
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||| ||    
T  22250033 gcaaatattaatcatttgacttttagtcctaattacatctgattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagactta 22249934  T
Q  101 tttaagc 107  Q
    |||||||    
T  22249933 tttaagc 22249927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 47980769 - 47980875
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| |||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| | ||||||||||    
T  47980769 gcaaatattaatcatttgacttttgatcctaattacatctgattagtaacttcatggacgaaaattcaaatgacctgtatttgcagggatgaaagaccta 47980868  T
Q  101 tttaagc 107  Q
    |||||||    
T  47980869 tttaagc 47980875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 37678148 - 37678040
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37678148 gcaaatattaatcatttgaaaaatggttctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagaccta 37678049  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  37678048 tttaagcca 37678040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 26601376 - 26601270
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||| |||||||| ||| | ||||||||||    
T  26601376 gcaaatattaatcatttgacttttggtcctaattacatctgattaataacttcagagacgaaaattcaaatgacttatatttgtagggatgaaagaccta 26601277  T
Q  101 tttaagc 107  Q
    |||||||    
T  26601276 tttaagc 26601270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 54961515 - 54961621
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||| || |||||||||| ||||||||||||| ||| | ||||||||||    
T  54961515 gcaaatattaatcatttgacttttgatcataattacatctgattagtaacttcagtgatgaaaattcaagtgacctatatttggagggatgaaagaccta 54961614  T
Q  101 tttaagc 107  Q
    |||||||    
T  54961615 tttaagc 54961621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 13872369 - 13872265
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||  |||||||||||||| |||||||||||| | ||||||||||    
T  13872369 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcaaggataaaaattcaaatgacatatatttgcagggatgaaagaccta 13872270  T
Q  101 tttaa 105  Q
    |||||    
T  13872269 tttaa 13872265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 19916956 - 19916848
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    |||||||||||||||||||||||||| |||||||||||||||||| ||||| |||| |||| |||||||||||||||    
T  19916956 gcaaatattaatcatttgaaaaatggtcataattacatctgattagtaatttcagggacgaaaattcatatgacttataattgctggaacgaaagaccta 19916857  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  19916856 tttaagcca 19916848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 35730961 - 35730853
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    | ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||| |||    
T  35730961 gcaaatattaatcatttgaaaaatagtcctaattacatctgattagtaacttcaaggacgaaaattcaaatgacctatatttgcatggacgaaagaacta 35730862  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  35730861 tttaagcca 35730853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 37677915 - 37677844
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  37677915 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggaagaaagacctatttaagccataa 37677844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 48507521 - 48507603
Alignment:
Q  24 tggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||    
T  48507521 tggtcctaattacacctgattagtaacttcagggacgaaaattcaaatgacttatatttgcagggacgaaagatctatttaag 48507603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 489460 - 489375
Alignment:
Q  24 tggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||||||||||| |||||||||| || ||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||    
T  489460 tggtcataattacatatgattagtaaatttagggacggaaattcaaacgacctatatttgcagggacgaaagacctatttaagcca 489375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 515252 - 515167
Alignment:
Q  24 tggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||||||||||| |||||||||| || ||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||    
T  515252 tggtcataattacatatgattagtaaatttagggacggaaattcaaacgacctatatttgcagggacgaaagacctatttaagcca 515167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 12691473 - 12691401
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataat 113  Q
    |||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||    
T  12691473 gattagtaacttcagggacgaaaattcaaatggcctatatttgcatggacgaaagacctatttaagccataat 12691401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 8287250 - 8287317
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  8287250 gattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagcc 8287317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 27813162 - 27813240
Alignment:
Q  30 taattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  27813162 taattacatctgattag-atcttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacctatttaagcca 27813240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 19740927 - 19740859
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    |||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||    
T  19740927 gattagtaacttcagggacgaaaattcaaatgacatatatttgcaaggacgaaagacctatttaagcca 19740859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 35730978 - 35731042
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  35730978 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctacttaa 35731042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 53559704 - 53559771
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  53559704 gattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcc 53559771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 54961498 - 54961431
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  54961498 gattagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaagcc 54961431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 54961748 - 54961813
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  54961748 gattagtaacttcagggactaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 54961813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 12691722 - 12691786
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  12691722 gattagtaacttcagggacaaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 12691786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 19916972 - 19917044
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataa 112  Q
    |||||||||||||||  |||||||||| |||||||||||||||||||| |||||| |||||||||||||||||    
T  19916972 tgattagtaacttcaaagacgaaaatttaaatgacctatatttgcagggacgaaaaacctatttaagccataa 19917044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 47862219 - 47862151
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||| | |||||||||||||||||||    
T  47862219 gattagtaacttcagagacgaaaattcaaatgacatatatttgcagggatgaaagacctatttaagcca 47862151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 48507734 - 48507798
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  48507734 gattagtaacttcagagacgaaaattcaaatgacctatatttgtagggacgaaagacctatttaa 48507798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 50246175 - 50246242
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| | |||||| |||||||||||    
T  50246175 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagatctatttaagcc 50246242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 22250051 - 22250117
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||| |||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  22250051 attagtaatttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcc 22250117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 37678165 - 37678231
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    |||||||||||||||||||||||||| ||||| | |||||||||||| |||||||||||||||||||    
T  37678165 gattagtaacttcagggacgaaaatttaaatggcttatatttgcagggacgaaagacctatttaagc 37678231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 47980748 - 47980687
Alignment:
Q  45 agtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    ||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  47980748 agtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaag 47980687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 50246158 - 50246049
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcaggg-acgaaaattcaaatgacctatatttgcaggaacgaaagacct 99  Q
    |||||||||| ||||||||    ||||  ||||| ||| |||||||||||||||||| ||||||||||||||||| |||| || |||| |||||||||||    
T  50246158 gcaaatattaatcatttgaaaaatggttttaattgcatttgattagtaacttcaggggacgaaaattcaaatgacttataattacagggacgaaagacct 50246059  T
Q  100 atttaagcca 109  Q
    ||||||||||    
T  50246058 atttaagcca 50246049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 32846446 - 32846549
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| ||||||||||| |||||||||| ||||||||||||||||||||  | |||||||||  |||||||||||||    
T  32846446 gcaaatattaatcatttgaaaaatggtcttaattacatcttattagtaactccagggacgaaaattcaaatggtcgatatttgca-aaacgaaagaccta 32846544  T
Q  101 tttaa 105  Q
    |||||    
T  32846545 tttaa 32846549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 8286999 - 8286932
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||| ||||||||| |||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  8286999 gattattaacttcagagacgaaaattcaaatggcttatatttgcagggacgaaagacctatttaagcc 8286932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 13872136 - 13872069
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  13872136 gattaataacttcatggacgaaaattcaaataacctatatttgcagggacgaaagacatatttaagcc 13872069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 20086504 - 20086437
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||  ||||||||| ||||||||||    
T  20086504 gattagtaacttcagggacgaaaattcaaatgacctatatttatagagacgaaagacatatttaagcc 20086437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 22249800 - 22249733
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||| |||||| || ||||||||||    
T  22249800 gattagtaacttcatggacgaaaattcaaatgatctatatttgcagggacgaaaaacatatttaagcc 22249733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 33294460 - 33294527
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||  |||||||||||||| | ||||||| ||||||||||    
T  33294460 gattagtaacttcagggacgaaaattcaaattgcctatatttgcagggaggaaagacatatttaagcc 33294527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 35730721 - 35730662
Alignment:
Q  49 acttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  35730721 acttcagagacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaagcc 35730662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 32846429 - 32846363
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    ||||| |||||||||| ||||||||||||||| |||||||||||| | |||||||||||||||||||    
T  32846429 gattaataacttcaggaacgaaaattcaaatggcctatatttgcaagcacgaaagacctatttaagc 32846363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 19916723 - 19916654
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccat 110  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||| ||| ||| ||||    
T  19916723 gattagtaacttcaggggcgaaaatttaaatgacctatatttgcagggacgaaagacatatctaaaccat 19916654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 47981953 - 47982022
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccat 110  Q
    ||||||||||||||| |||||||||||||||   ||||||||||||| ||||||||| ||||||||||||    
T  47981953 gattagtaacttcagagacgaaaattcaaatagtctatatttgcagggacgaaagacatatttaagccat 47982022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 50245925 - 50245860
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||| ||| ||||||||||||||||||||||| |||| |||||||| ||||||||    
T  50245925 tgattagtaacttcatggatgaaaattcaaatgacctatatttacagggacgaaagatctatttaa 50245860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 47862469 - 47862543
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataattttt 117  Q
    |||||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||| |||||||||| ||||||||    
T  47862469 gattagtaacttcatggacgaaaattcaaatggcctatatttacagg-acgaaagacatatttaagcc-taattttt 47862543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 13872387 - 13872454
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    |||||||||||||||||| |||||||||||   ||||||||||||| ||||||||| |||||||||||    
T  13872387 attagtaacttcagggacaaaaattcaaatagactatatttgcagggacgaaagacatatttaagcca 13872454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 20601064 - 20601139
Alignment:
Q  34 tacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||| |||| ||||||||||||||||||||| ||||||||||| || || | ||||||||| |||||||||||    
T  20601064 tacatcttattaataacttcagggacgaaaattcgaatgacctataattacaaggacgaaagacatatttaagcca 20601139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 37732397 - 37732464
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||||||||||| |||||||||||||| |||||||||| |||| ||| || ||||||||||||||    
T  37732397 attagtaacttcaggaacgaaaattcaaataacctatatttacagggacgtaaaacctatttaagcca 37732464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 37732364 - 37732299
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    ||||||||||||||   ||||||||||||||||| |||||||||||| | ||||||||||||||||    
T  37732364 gattagtaacttcaaaaacgaaaattcaaatgacatatatttgcagggatgaaagacctatttaag 37732299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 34238781 - 34238833
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaa 94  Q
    |||||||| |||||||||||||||| |||||| ||||||||||||||||||||    
T  34238781 attagtaatttcagggacgaaaatttaaatgatctatatttgcaggaacgaaa 34238833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 34238537 - 34238474
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctattta 104  Q
    ||||||||||||||| |||||||||||||||  ||||||||| || | ||||||||||||||||    
T  34238537 gattagtaacttcagagacgaaaattcaaatagcctatatttacaaggacgaaagacctattta 34238474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 33294211 - 33294138
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataatt 114  Q
    |||||||||||||| |||| ||||||||||| ||||||||||||| | || ||| || |||||||||| |||||    
T  33294211 gattagtaacttcatggacaaaaattcaaataacctatatttgcatggacaaaaaacatatttaagccgtaatt 33294138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 27813370 - 27813437
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||||||||||||| || ||||||||||| | |||| ||||||| ||||||||| |||||||||||    
T  27813370 gattagtaacttcaggggcggaaattcaaatggcgtata-ttgcagggacgaaagacttatttaagcca 27813437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 13336871 - 13336938
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||| |||||||| |||| ||||||||||||||||||||||| | ||||  | ||||||||||    
T  13336871 gattagtaagttcagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatatttaagcc 13336938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 20600997 - 20600954
Alignment:
Q  58 acgaaaattcaaatgacctatatttgcaggaacgaaagacctat 101  Q
    |||||||||||||||||||||||||| ||| |||||||||||||    
T  20600997 acgaaaattcaaatgacctatatttgaagggacgaaagacctat 20600954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 27813112 - 27813051
Alignment:
Q  45 agtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    |||||||||| |||  |||||||||||||| |||||||||||| || |||||| ||||||||    
T  27813112 agtaacttcatggataaaaattcaaatgacttatatttgcagggacaaaagacttatttaag 27813051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 45199194 - 45199137
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacc 98  Q
    ||||||||||||||| |||||||||||| ||||  ||||||||| || ||||||||||    
T  45199194 gattagtaacttcagagacgaaaattcagatgatttatatttgcggggacgaaagacc 45199137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 28911018 - 28910986
Alignment:
Q  220 gagattaattagaatagactgacagtgtaaaac 252  Q
    |||||||||||||||||||||||||||||||||    
T  28911018 gagattaattagaatagactgacagtgtaaaac 28910986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 22882360 - 22882406
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagg 87  Q
    ||||| ||| |||||||| |||| |||||||||||||||||||||||    
T  22882360 gattattaagttcagggatgaaatttcaaatgacctatatttgcagg 22882406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 22934024 - 22934070
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagg 87  Q
    ||||| ||| |||||||| |||| |||||||||||||||||||||||    
T  22934024 gattattaagttcagggatgaaatttcaaatgacctatatttgcagg 22934070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 26601392 - 26601426
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgac 74  Q
    ||||||||||||||| |||||||||||||||||||    
T  26601392 tgattagtaacttcatggacgaaaattcaaatgac 26601426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 2357703 - 2357736
Alignment:
Q  219 agagattaattagaatagactgacagtgtaaaac 252  Q
    ||||||||||||||||||||| ||||||||||||    
T  2357703 agagattaattagaatagactaacagtgtaaaac 2357736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 251
Target Start/End: Original strand, 28909871 - 28909904
Alignment:
Q  218 aagagattaattagaatagactgacagtgtaaaa 251  Q
    ||||||||||||||||||||||||| ||||||||    
T  28909871 aagagattaattagaatagactgacggtgtaaaa 28909904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 45
Target Start/End: Original strand, 53752331 - 53752364
Alignment:
Q  12 tcatttgacttttggtcataattacatctgatta 45  Q
    ||||||||||||||||| ||||||||||||||||    
T  53752331 tcatttgacttttggtcctaattacatctgatta 53752364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 46258634 - 46258602
Alignment:
Q  219 agagattaattagaatagactgacagtgtaaaa 251  Q
    ||||||||||||||||||||||||| |||||||    
T  46258634 agagattaattagaatagactgacaatgtaaaa 46258602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 1e-41; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 53037111 - 53037217
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||    
T  53037111 gcaaatattagtcatttgacatttgatcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggatgaaagaccta 53037210  T
Q  101 tttaagc 107  Q
    |||||||    
T  53037211 tttaagc 53037217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 51279528 - 51279425
Alignment:
Q  3 aaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatt 102  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||    
T  51279528 aaatattaatcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagg-atgaaagtcctatt 51279430  T
Q  103 taagc 107  Q
    |||||    
T  51279429 taagc 51279425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 10749402 - 10749508
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||    
T  10749402 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggacgaaaatttaaatgacctatatttgcagggatgaaagaccta 10749501  T
Q  101 tttaagc 107  Q
    || ||||    
T  10749502 ttaaagc 10749508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 21300431 - 21300327
Alignment:
Q  3 aaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatt 102  Q
    |||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||    
T  21300431 aaatattaatcatttgacttttggccctaattacatctgattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacctatt 21300332  T
Q  103 taagc 107  Q
    |||||    
T  21300331 taagc 21300327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 40256958 - 40257062
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| | ||||||||||    
T  40256958 gcaaatattaatcatttgacttttggtcctaattacatctgattagcaacttcaggaacgaaaattcaaatgacctatatttgcagggatgaaagaccta 40257057  T
Q  101 tttaa 105  Q
    |||||    
T  40257058 tttaa 40257062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 11313035 - 11312929
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    ||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||| ||    
T  11313035 gcaaatactaatcatttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggatgaaagactta 11312936  T
Q  101 tttaagc 107  Q
    |||||||    
T  11312935 tttaagc 11312929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 22129090 - 22129196
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||| ||    
T  22129090 gcaaatattaatcatttgacttttcgtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttacagggatgaaagactta 22129189  T
Q  101 tttaagc 107  Q
    |||||||    
T  22129190 tttaagc 22129196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 55036753 - 55036859
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| |||||| || ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  55036753 gcaaatattaatcatttaacctttggtcctaattatatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagaccta 55036852  T
Q  101 tttaagc 107  Q
    |||||||    
T  55036853 tttaagc 55036859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 30803953 - 30804038
Alignment:
Q  24 tggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  30803953 tggtcctaattacatctgattagtaacttccgggacgaaaattcaaatgacctatatttgcagggacgaaaaacctatttaagcca 30804038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 1741674 - 1741581
Alignment:
Q  14 atttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||| || |||||||||||| |||| | |||||||||||||||||    
T  1741674 atttgacttttggtcctaattacatctgattagtaactccagggacgaaaatttaattgacctatattttcagggatgaaagacctatttaagc 1741581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 33989121 - 33989205
Alignment:
Q  24 tggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  33989121 tggtcctaattacatctgattagtaacttcagg-acgaaaattcaaatgacctatatttgcagggacgaaaaacctatttaagcca 33989205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 10997960 - 10998044
Alignment:
Q  3 aaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagg 87  Q
    |||||||| |||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  10997960 aaatattaatcatttgacttttgatcctaattacatctgattagtaacttcatggacgaaaattcaaatgacatatatttgcagg 10998044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 24576403 - 24576482
Alignment:
Q  30 taattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  24576403 taattacatctgatttgtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaaaacttatttaagcca 24576482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 35432462 - 35432543
Alignment:
Q  28 cataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||||||||||||||||||||||| || ||||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  35432462 cataattacatctgattagtaacttcatgggcgaaaattcaaatggtctatatttgcagggacgaaagacctatttaagcca 35432543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 33458000 - 33458104
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||  ||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||| ||||||||||||    
T  33458000 gcaaatattaatcatttgaaaaatggttctaattacatctgattagtaactttagagacgaaaattcaaatgacctatatttgtagggacgaaagaccta 33458099  T
Q  101 tttaa 105  Q
    |||||    
T  33458100 tttaa 33458104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 1741454 - 1741387
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  1741454 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 1741387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 10749385 - 10749318
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  10749385 gattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacctatttaagcc 10749318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 30890293 - 30890396
Alignment:
Q  3 aaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatt 102  Q
    |||||||| ||||||||    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||| | |||||    
T  30890293 aaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacttatatttgctgggacgaaatatctatt 30890392  T
Q  103 taag 106  Q
    ||||    
T  30890393 taag 30890396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 55036736 - 55036661
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataatttt 116  Q
    |||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  55036736 gattagtaacttcaggaatgaaaattcaaatgacctatatttgcagggacgaaagacctatttaaaccataatttt 55036661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 33458235 - 33458301
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  33458235 gattagtaacttcagggacgacaattcaaatgacctatatttgcagggacgaaagacctatttaagc 33458301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 46670532 - 46670452
Alignment:
Q  24 tggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||| |||||||| ||||||||    
T  46670532 tggtcataattacatctgattagtaacttcagggatgaaaattcaaatgacatatatttg-agggacgaaagatctatttaa 46670452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 53037094 - 53037025
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccat 110  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| | ||||||| ||||||||||||    
T  53037094 gattagtaacttcagggacgaaaattcaaatgacctatatttacagggatgaaagacttatttaagccat 53037025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 30890524 - 30890588
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  30890524 gattagtaacttcagggatgaaaattcaaatgacctatatttacagaaacgaaagacctatttaa 30890588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 51279299 - 51279231
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  51279299 tgattagtaacttctgggacgaaaattcaaataacctatatttgcagggacgaaagacatatttaagcc 51279231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 10749713 - 10749780
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||| |||||    
T  10749713 gattagtaacttcagggacgaaaatttaaatgacctatatttgcagggacgaaagacatattcaagcc 10749780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 21255829 - 21255730
Alignment:
Q  3 aaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatt 102  Q
    |||||||| ||||||||    ||||| ||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||| | ||||||| ||||    
T  21255829 aaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcaggaatgaaaattcaaatgacttatatttgcagggatgaaagacttatt 21255730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 28310665 - 28310732
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||| |||| |||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  28310665 gattagtaactttagggtcgaagattcaaatgacctatatttgctggaacgaaagacctatttaagcc 28310732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 10997944 - 10997878
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||| || |||||||||    
T  10997944 gattagtaacttcagggacgaaaattcaaatgacctgtatttgcaggaacaaaatacatatttaagc 10997878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 10998190 - 10998256
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||| || |||||||||    
T  10998190 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagagacgaaaaacatatttaagc 10998256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 40256941 - 40256879
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctattt 103  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||    
T  40256941 gattagtaacttcagggacgaaaattcaaataacctatatttgcatggacgaaagacctattt 40256879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 21255849 - 21255914
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    ||||||||||| | |||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  21255849 attagtaactttatggacgaaaattcaaatgatctatatttgcaggaacgaaagacttatttaagc 21255914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 21300450 - 21300514
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||| |||||||||||||||||    
T  21300450 gattagtaacttcagagacgaaaattcaaataacatatatttgcagggacgaaagacctatttaa 21300514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 42 - 106
Target Start/End: Complemental strand, 30654742 - 30654678
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    ||||||||||||| |||||||||| |||||||| |||||||||| ||||||||||||||||||||    
T  30654742 attagtaacttcatggacgaaaatgcaaatgacatatatttgcaagaacgaaagacctatttaag 30654678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 42 - 106
Target Start/End: Complemental strand, 30803912 - 30803848
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  30803912 attagtaacttcagagacgaaaattcaaatgacctatagttgaagggacgaaagacctatttaag 30803848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 55036986 - 55037050
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  55036986 gattagtaacttcaagaacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 55037050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 11312802 - 11312735
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||| |||||||||||||||||||||||||||||||||||||  ||| ||||||||| ||||||||||    
T  11312802 gattggtaacttcagggacgaaaattcaaatgacctatatttagagggacgaaagacatatttaagcc 11312735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 30654800 - 30654863
Alignment:
Q  45 agtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  30654800 agtaacttcatagacgaaaattcaaatgacctatatttgcagggacgaaagacctattaaagcc 30654863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 24576355 - 24576291
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||| |||| ||||||||||||||||| | |||||||||||| |||||||||||||||||    
T  24576355 gattagtaatttcatggacgaaaattcaaatggcttatatttgcagggacgaaagacctatttaa 24576291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 28310648 - 28310541
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| |||||||||||||||||| || |||||||| ||||||||||||  ||||||||||| |  |  ||||||||    
T  28310648 gcaaatattaatcatttgaaaaatggtcctaattacatctgattagttacgtcagggacaaaaattcaaatggtctatatttgcaaggtcacaagaccta 28310549  T
Q  101 tttaagcc 108  Q
    ||||||||    
T  28310548 tttaagcc 28310541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 35432461 - 35432406
Alignment:
Q  53 cagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  35432461 cagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaagcc 35432406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 46670315 - 46670248
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||| |||| ||||| |||||||||||||||||||||||||| || |||||| ||||||||||    
T  46670315 gattagtaaattcaaggacggaaattcaaatgacctatatttgcagggacaaaagacttatttaagcc 46670248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 22129073 - 22128997
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataattttta 118  Q
    ||||||||||||||| |||||||||||||||  ||||||||| | || | |||||||||||||||||| |||||||||    
T  22129073 gattagtaacttcagtgacgaaaattcaaatagcctatatttacggggatgaaagacctatttaagcc-taattttta 22128997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 30654550 - 30654483
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||||||||| |||||||| |||||| ||| |||||||||||| | ||||||| |||||||||||    
T  30654550 attagtaacttcaaggacgaaatttcaaacgacttatatttgcagggatgaaagacttatttaagcca 30654483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 38642960 - 38642867
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaa 94  Q
    |||||||||| ||||||||    | ||| ||||| |||||||||| |||||||| |||||||| |||||||  |||||||||||||| ||||||    
T  38642960 gcaaatattaatcatttgaaaaatagtcctaattgcatctgattaataacttcatggacgaaagttcaaatagcctatatttgcagggacgaaa 38642867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 46670573 - 46670618
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcagg 87  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||    
T  46670573 attagtaacttcagggatgaaaattcaaatgacctatatttacagg 46670618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 22129326 - 22129362
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgaccta 77  Q
    |||||||||||||||||||||||||||||||||||||    
T  22129326 gattagtaacttcagggacgaaaattcaaatgaccta 22129362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 28310415 - 28310352
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||||||||||| ||||||| ||||||||||||||| ||||||| ||  ||||||||||||||||    
T  28310415 gattagtaactttagggacggaaattcaaatgacct-tatttgcgggggcgaaagacctatttaa 28310352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 40257189 - 40257257
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||| ||||||||||||||||||||| || |||||||  ||| |||||| || ||||||||||    
T  40257189 tgattagtaatttcagggacgaaaattcaaataacttatatttatagggacgaaaaacatatttaagcc 40257257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 49715 - 49640
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataattttt 117  Q
    |||||||| ||||||||||||| |||||||  | |||||||||||| || ||| ||||||||||||| || |||||    
T  49715 attagtaatttcagggacgaaatttcaaatagcttatatttgcagggacaaaatacctatttaagccttatttttt 49640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 33989081 - 33989015
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||| ||| ||||||||||||| |  ||||||||||||| |||||| |||||||||||||    
T  33989081 gattagtaacttaaggtacgaaaattcaaaaggtctatatttgcagg-acgaaatacctatttaagcc 33989015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 30804165 - 30804231
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    |||||||||||||||| ||||||||||||||||  |||||||  ||| |||||| || |||||||||    
T  30804165 gattagtaacttcaggaacgaaaattcaaatgatatatatttaaagggacgaaatacttatttaagc 30804231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 38642698 - 38642632
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    |||| ||||||||||||||  ||||| ||||||| |||||||||| | |||||| ||||||||||||    
T  38642698 gattggtaacttcagggacagaaatttaaatgacttatatttgcatggacgaaatacctatttaagc 38642632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 38642990 - 38643040
Alignment:
Q  58 acgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||| ||||||||||||  |||||| |||||||||||||    
T  38642990 acgaaaattcaaatgatctatatttgcagagacgaaacacctatttaagcc 38643040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 33989336 - 33989401
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    ||||| |||||||| ||||||||||||||||||  ||||||||||   ||||||||| ||||||||    
T  33989336 gattactaacttcatggacgaaaattcaaatgatatatatttgcatctacgaaagacatatttaag 33989401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 53037348 - 53037409
Alignment:
Q  45 agtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    |||||||  ||||||||||||||||||||||||||||| |||  ||||||||  ||||||||    
T  53037348 agtaactgtagggacgaaaattcaaatgacctatatttacagagacgaaagatatatttaag 53037409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 33457983 - 33457919
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||| | | ||||||||||||| | |||||| || | |||||||||||||||||    
T  33457983 gattagtaacttcagaggcaaaaattcaaatgatccatatttacatggacgaaagacctatttaa 33457919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 51279541 - 51279600
Alignment:
Q  51 ttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccat 110  Q
    |||| ||||||||||||||||||||||||||| || | ||| ||||  ||||||||||||    
T  51279541 ttcaaggacgaaaattcaaatgacctatatttacaaggacggaagatttatttaagccat 51279600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 10998173 - 10998139
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataatta 35  Q
    |||||||||| ||||||||||||||||||||||||    
T  10998173 gcaaatattaatcatttgacttttggtcataatta 10998139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 24576612 - 24576679
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccat 110  Q
    ||||||||| ||||  || |||||||||| ||||||||  || |||| ||||||||||||||||||||||    
T  24576612 gattagtaatttcaaagatgaaaattcaactgacctat--ttacagggacgaaagacctatttaagccat 24576679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 10749696 - 10749663
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataatt 34  Q
    |||||||||| |||||||||||||||||||||||    
T  10749696 gcaaatattaatcatttgacttttggtcataatt 10749663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 30890274 - 30890233
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatattt 82  Q
    ||||||||||||||| || |||||||||||||| ||||||||    
T  30890274 gattagtaacttcagagatgaaaattcaaatgatctatattt 30890233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 13618780 - 13618748
Alignment:
Q  220 gagattaattagaatagactgacagtgtaaaac 252  Q
    |||||||||||||||||| ||||||||||||||    
T  13618780 gagattaattagaatagattgacagtgtaaaac 13618748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 1e-41; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 20911214 - 20911320
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||| ||||    
T  20911214 gcaaatattaatcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggataaaagtccta 20911313  T
Q  101 tttaagc 107  Q
    |||||||    
T  20911314 tttaagc 20911320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 32519239 - 32519345
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  32519239 gcaaatattaatcatttgacttttggttctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagaccta 32519338  T
Q  101 tttaagc 107  Q
    |||||||    
T  32519339 tttaagc 32519345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 22731832 - 22731723
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||    
T  22731832 gcaaatattaatcatttgacttttggtccttattacatctgattagtaactttagggacgaaaattcaaatgacctatatttgcagggatgaaagaccta 22731733  T
Q  101 tttaagccat 110  Q
    ||||||||||    
T  22731732 tttaagccat 22731723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 45663808 - 45663701
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| ||    
T  45663808 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcaagaacgaaaattcaaatgacctatatttgcagggacgaaagacata 45663709  T
Q  101 tttaagcc 108  Q
    ||||||||    
T  45663708 tttaagcc 45663701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 1150021 - 1150127
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  1150021 gcaaatattaatcatttgacttttggtcctaattacatttgattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagaccta 1150120  T
Q  101 tttaagc 107  Q
    |||||||    
T  1150121 tttaagc 1150127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 16367263 - 16367157
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  16367263 gcaaatattaatcatttgacttttggtcctaattacatatgattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagaccta 16367164  T
Q  101 tttaagc 107  Q
    |||||||    
T  16367163 tttaagc 16367157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 8089536 - 8089642
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||| | ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| | ||||||||||    
T  8089536 gcaaatatcaatcatttgacttttggtcctaattacatctgattagtaacttcaaggacgaaaattcaaacgacctatatttgcagggatgaaagaccta 8089635  T
Q  101 tttaagc 107  Q
    |||||||    
T  8089636 tttaagc 8089642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 17580412 - 17580516
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | ||||||||||    
T  17580412 gcaaatattaatcatttgacttttgatcctaattacatctgattagtaacttcagggacgaaaattcaaatgatctatatttgcaaggatgaaagaccta 17580511  T
Q  101 tttaa 105  Q
    |||||    
T  17580512 tttaa 17580516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 41846663 - 41846584
Alignment:
Q  30 taattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  41846663 taattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacttatttaagcca 41846584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 9694042 - 9693937
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||  ||||    
T  9694042 gcaaatattaatcatttgaaaaatggtcctaattacatctgattagtaactttagggacgaaaattcaaatgacctatatttgcagggacgaaaatccta 9693943  T
Q  101 tttaag 106  Q
    ||||||    
T  9693942 tttaag 9693937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 22309731 - 22309623
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||  ||||    
T  22309731 gcaaatattaatcatttgaaaaatggtcctaattacatctgattagtaactttagggacgaaaattcaaatgacctatatttgcagggacaaaatgccta 22309632  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  22309631 tttaagcca 22309623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 20911197 - 20911130
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20911197 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 20911130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 43682155 - 43682049
Alignment:
Q  3 aaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatt 102  Q
    |||||||| ||||||||    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||  ||||||||| ||||    
T  43682155 aaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaataacctaaatttgcagagacgaaagacatatt 43682056  T
Q  103 taagcca 109  Q
    |||||||    
T  43682055 taagcca 43682049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 17366733 - 17366818
Alignment:
Q  24 tggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||| | ||||||||| |||||||||||    
T  17366733 tggtcctaattacatctgattagtaacttcagggacgaaaattcaaatggactatatttgcaaggacgaaagacatatttaagcca 17366818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 5608894 - 5608786
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| |||||||||||||||||||||||||   ||||||||| ||||||| |||||||||||| ||||||||||||    
T  5608894 gcaaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcataaacgaaaattaaaatgacttatatttgcagggacgaaagaccta 5608795  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  5608794 tttaagcca 5608786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 1150004 - 1149937
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  1150004 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaatacctatttaagcc 1149937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 9694059 - 9694126
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  9694059 gattagtaacttcagggacgaaaattcaaatgacctatatttgcatggacgaaagacctatttaagcc 9694126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 9959124 - 9959017
Alignment:
Q  2 caaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctat 101  Q
    ||||||||| ||||||||    |||||||||||||||||||||||||||||||  ||  ||||||||||||||||||||||||||| |||||| ||| ||    
T  9959124 caaatattaatcatttgaaaaatggtcataattacatctgattagtaacttcaaagataaaaattcaaatgacctatatttgcagggacgaaaaaccaat 9959025  T
Q  102 ttaagcca 109  Q
    ||||||||    
T  9959024 ttaagcca 9959017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 22309749 - 22309815
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  22309749 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggaagaaagacctatttaagcc 22309815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 10446899 - 10446830
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccat 110  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  10446899 gattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagccat 10446830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 28599511 - 28599619
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| ||||||||| | |||||||| ||||||||||||||||||||||  |||||||||||||  |||||||||||    
T  28599511 gcaaatattaatcatttgaaaaatggtcctaattacatataattagtaatttcagggacgaaaattcaaatggtctatatttgcaggggcgaaagaccta 28599610  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  28599611 tttaagcca 28599619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 1150254 - 1150321
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  1150254 gattagtaatttcagggacgaaaattcaaatgacctatatttgcaggcacgaaagacatatttaagcc 1150321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 16367030 - 16366963
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||    
T  16367030 gattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagcc 16366963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 32519222 - 32519155
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  32519222 gattagtaatttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 32519155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 110
Target Start/End: Original strand, 20911445 - 20911515
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccat 110  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  20911445 tgattagtaacttcagggacaaaaattcaaatgacctatatttacagggacgaaagacatatttaagccat 20911515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 4375633 - 4375737
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||  ||||||||||||||||||||||||||||||||||||||||||  | |||||||||||  ||||||||| ||    
T  4375633 gcaaatattaatcatttgaaaaatggttctaattacatctgattagtaacttcagggacgaaaattcaaattgcatatatttgcagagacgaaagacata 4375732  T
Q  101 tttaa 105  Q
    |||||    
T  4375733 tttaa 4375737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 17284810 - 17284743
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||  |||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  17284810 gattagtaacttcagatacgaaaattcaaatgacctatatttgcagggacgaaaaacctatttaagcc 17284743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 22309498 - 22309431
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22309498 gattagtaacttcattgactaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 22309431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 32519472 - 32519539
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||| ||||||||||    
T  32519472 gattagtaacttcaggaacgaaaattcaaatgacttatatttgcagggacgaaagacatatttaagcc 32519539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 41846459 - 41846392
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  41846459 gattactaacttcagggacgaaaattcaaatgacctatatttgtagggacgaaagatctatttaagcc 41846392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 17284821 - 17284927
Alignment:
Q  3 aaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatt 102  Q
    |||||||| ||||||||    ||||| ||| ||||| ||||||||||||||||| |  ||||||||||| ||||||||||||||| ||||||| ||||||    
T  17284821 aaatattaatcatttgaaaaatggtcctaactacatatgattagtaacttcaggaatcaaaattcaaattacctatatttgcagggacgaaagccctatt 17284920  T
Q  103 taagcca 109  Q
    |||||||    
T  17284921 taagcca 17284927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 16367280 - 16367336
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagac 97  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  16367280 gattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagac 16367336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 18476974 - 18476910
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||| |||||||||    
T  18476974 gattagtaacttcagggacaaaaattcaaatgacctatagttgcagggacgaaaggcctatttaa 18476910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 19606984 - 19606920
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| |||||||    
T  19606984 gattagtaacttcagggacgaaaattcaaatgacatatatttacagggacgaaagacatatttaa 19606920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 22731852 - 22731916
Alignment:
Q  44 tagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  22731852 tagtaacttcacggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcc 22731916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 28599494 - 28599430
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||||||||||||| |||||||||||||||||| ||||||||||| | |||||||||||||||||    
T  28599494 gattagtaacttcatggacgaaaattcaaatgatctatatttgcaaggacgaaagacctatttaa 28599430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 43681924 - 43681856
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||    
T  43681924 tgattagtaactttatggacgaaaattcaaatgacatatatttgcagggacgaaagacatatttaagcc 43681856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 4375868 - 4375935
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| | ||||||||||||||||||||    
T  4375868 gattagtaacttcatggacgaaaatttaaatgacatatatttgcatggacgaaagacctatttaagcc 4375935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 5608911 - 5608982
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataa 112  Q
    |||||||||||| || || |||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  5608911 gattagtaactttagagaggaaaattcaaatgatctatatttgctggaacgaaagacctgtttaagccataa 5608982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 17285052 - 17285121
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccat 110  Q
    ||||||||||||||  ||||||||||||||||||||| |||| |||| |||||||| |||||||||||||    
T  17285052 gattagtaacttcattgacgaaaattcaaatgacctaaattttcagggacgaaagatctatttaagccat 17285121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 28599744 - 28599813
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccat 110  Q
    |||| |||||||||| |||||||||||||||||| ||||||| |||| | ||||||||||||||||||||    
T  28599744 gatttgtaacttcagagacgaaaattcaaatgacttatatttacagggatgaaagacctatttaagccat 28599813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 45663825 - 45663894
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccat 110  Q
    |||||||||||||||||||||||||||||||   |||||||| |||| ||||||||| ||||||||||||    
T  45663825 gattagtaacttcagggacgaaaattcaaattgactatatttacagggacgaaagacatatttaagccat 45663894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 8089767 - 8089831
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||||||| ||||| |||||||||||||||| || ||||||||||| |||||||    
T  8089767 gattagtaacttcagggacaaaaatgcaaatgacctatatttacaagaacgaaagacatatttaa 8089831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 9959142 - 9959206
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||| ||||||||| |||||||    
T  9959142 gattagtaacttcatggaccaaaattcaaatgaccaatatttgcagggacgaaagacttatttaa 9959206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 17580641 - 17580709
Alignment:
Q  41 gattagtaacttcagggacgaaaa-ttcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| ||| ||||||||| ||||||||||    
T  17580641 gattagtaactttagggacgaaaaattcaaatgacctatatttgtagggacgaaagacatatttaagcc 17580709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 17366693 - 17366626
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||| ||| |||||||| |||||||||||||||||||||||||| | | ||||||||||||||||||    
T  17366693 gattattaaattcagggaagaaaattcaaatgacctatatttgcatggatgaaagacctatttaagcc 17366626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 24607981 - 24607914
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||| ||||||||||||||||||| |||| | |||| |||| ||||||||||||    
T  24607981 gattagtaacttcagggaagaaaattcaaatgacctatgtttgtaagaactaaagtcctatttaagcc 24607914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 37984834 - 37984904
Alignment:
Q  24 tggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaa 94  Q
    ||||| |||||||||||||||||||| |||| | | ||||||||||||||| |||||||||||| ||||||    
T  37984834 tggtcctaattacatctgattagtaatttcatgaaagaaaattcaaatgacatatatttgcagggacgaaa 37984904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 8089519 - 8089455
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||  |||||||||||||||||| |||||||||||  |||||| ||||||||||    
T  8089519 gattagtaacttcaaagacgaaaattcaaatgacatatatttgcagagacgaaaaacctatttaa 8089455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 9958891 - 9958825
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||| |||||||  ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||    
T  9958891 attagcaacttcattgacgaaaattcaaatgatctatatttgcagggacgaaa-acctatttaagcca 9958825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 17580395 - 17580324
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataa 112  Q
    ||||| ||||||| |||||||||||||||||   |||||||| |||  ||||||||||||||||||||||||    
T  17580395 gattaataacttcggggacgaaaattcaaatagtctatatttacagagacgaaagacctatttaagccataa 17580324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 105
Target Start/End: Original strand, 18477192 - 18477257
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||||||||||| ||||||||||| ||||| | |||||||||||| |||||| || |||||||    
T  18477192 tgattagtaacttcatggacgaaaatttaaatggcttatatttgcagggacgaaatacatatttaa 18477257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 18477153 - 18477113
Alignment:
Q  24 tggtcataattacatctgattagtaacttcagggacgaaaa 64  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  18477153 tggtcctaattacatctgattagtaacttcagggacgaaaa 18477113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 19607135 - 19607218
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagg 87  Q
    |||||||||| | ||||||||||||||  |||||||||   |||||||| ||| | ||||||||||||||||| |||||||| ||||    
T  19607135 gcaaatattaataatttgacttttggttctaattacat---attagtaatttcggagacgaaaattcaaatgatctatatttacagg 19607218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 37985044 - 37985111
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||| ||||| |||||||| ||||||||| |||||||||||| |||||| || ||||| ||||    
T  37985044 gattagtaatttcagagacgaaaaatcaaatgacatatatttgcagggacgaaatacttattttagcc 37985111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 19607243 - 19607287
Alignment:
Q  61 aaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||    
T  19607243 aaaattcaaatgacctatatttgcagg-atgaaagacctatttaag 19607287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 19620826 - 19620879
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaa 94  Q
    ||||||||| |||||||| |||| ||||||||||||||||||| ||| ||||||    
T  19620826 gattagtaagttcagggatgaaatttcaaatgacctatatttgtagggacgaaa 19620879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 43682189 - 43682238
Alignment:
Q  60 gaaaattcaaatgacctatatttgcaggaacgaaa-gacctatttaagcc 108  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||||||||    
T  43682189 gaaaattcaaatgacctatatttggagggacgaaatgacctatttaagcc 43682238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 9693809 - 9693741
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||||||||||| |||||||||| ||||| ||||||||| |||  || |||  |||||||||||||    
T  9693809 gattagtaacttcagtgacgaaaattaaaatggcctatattttcagcgacaaaatccctatttaagcca 9693741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 20911430 - 20911396
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataatta 35  Q
    |||||||||| ||||||||||||||||||||||||    
T  20911430 gcaaatattaatcatttgacttttggtcataatta 20911396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 41846712 - 41846750
Alignment:
Q  44 tagtaacttcagggacgaaaattcaaatgacctatattt 82  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  41846712 tagtaacttcaggaacgaaaattcaaatggcctatattt 41846750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 43236571 - 43236525
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagg 87  Q
    ||||||||| |||||||| |||| |||||||| ||||||||||||||    
T  43236571 gattagtaagttcagggatgaaatttcaaatggcctatatttgcagg 43236525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 23206441 - 23206485
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgca 85  Q
    |||||||||||||| ||| |||| |||||||| ||||||||||||    
T  23206441 gattagtaacttcaaggatgaaatttcaaatgccctatatttgca 23206485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 23678045 - 23678089
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgca 85  Q
    |||||||||||||| ||| |||| |||||||| ||||||||||||    
T  23678045 gattagtaacttcaaggatgaaatttcaaatgccctatatttgca 23678089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 252
Target Start/End: Original strand, 35413579 - 35413611
Alignment:
Q  220 gagattaattagaatagactgacagtgtaaaac 252  Q
    |||||||||||||||||||| ||||||||||||    
T  35413579 gagattaattagaatagactaacagtgtaaaac 35413611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 1e-41; HSPs: 91)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 6056460 - 6056566
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  6056460 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagactta 6056559  T
Q  101 tttaagc 107  Q
    |||||||    
T  6056560 tttaagc 6056566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 12577312 - 12577206
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||     
T  12577312 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctg 12577213  T
Q  101 tttaagc 107  Q
    |||||||    
T  12577212 tttaagc 12577206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 33347716 - 33347610
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  33347716 gcaaatattaatcatttgacttttggtcctaattacatctgactagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagaccta 33347617  T
Q  101 tttaagc 107  Q
    |||||||    
T  33347616 tttaagc 33347610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 46364875 - 46364769
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  46364875 gcaaatattaatcatttgacttttgatcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagaccta 46364776  T
Q  101 tttaagc 107  Q
    |||||||    
T  46364775 tttaagc 46364769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 26953401 - 26953297
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||    
T  26953401 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagagacgaaaattcaaatgacctatatttgcagggatgaaagaccta 26953302  T
Q  101 tttaa 105  Q
    |||||    
T  26953301 tttaa 26953297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 19755705 - 19755599
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  19755705 gcaaatattaatcatttgacttttggtcctaattatatctgattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagaccta 19755606  T
Q  101 tttaagc 107  Q
    |||||||    
T  19755605 tttaagc 19755599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 29042839 - 29042945
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | | ||||||||||    
T  29042839 gcaaatattaatcatttgatttttggtcataattacatctgattagtaacttcagggatgaaaattcaaatgacctatatttgcaaggatgaaagaccta 29042938  T
Q  101 tttaagc 107  Q
    |||||||    
T  29042939 tttaagc 29042945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 46849958 - 46849852
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | | ||||||||||    
T  46849958 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacatatatttgcaaggatgaaagaccta 46849859  T
Q  101 tttaagc 107  Q
    |||||||    
T  46849858 tttaagc 46849852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 739303 - 739408
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| | ||||||||||    
T  739303 gcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcaggaacgaaaattcaaatgacctata-ttgcagggatgaaagaccta 739401  T
Q  101 tttaagc 107  Q
    |||||||    
T  739402 tttaagc 739408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 5183806 - 5183700
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||||||||    
T  5183806 gcaaatattaatcatttgacttttggtcctaattacatatgattagtaacttcatggacgaaaattcaaatgacctatatttgtagggatgaaagaccta 5183707  T
Q  101 tttaagc 107  Q
    |||||||    
T  5183706 tttaagc 5183700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 25415144 - 25415038
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    ||||||||||  |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | | ||||||||||    
T  25415144 gcaaatattaaccatttgacttttggtcctaattacatctgattagtaacttcagagacgaaaattcaaatgacctatatttgcatggatgaaagaccta 25415045  T
Q  101 tttaagc 107  Q
    |||||||    
T  25415044 tttaagc 25415038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 29980938 - 29980832
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| |||||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||    
T  29980938 gcaaatattaatcatttgatttttggtcctaattacatcttattagtaactttagggacgaaaattcaaatgacctatatttgcagggatgaaagaccta 29980839  T
Q  101 tttaagc 107  Q
    |||||||    
T  29980838 tttaagc 29980832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 49003175 - 49003070
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||| ||    
T  49003175 gcaaatattaatcatttgatttttggtcctaattacatctgattagtaacttcagggacggaaattcaaatgacctatatttgcagggatgaaagactta 49003076  T
Q  101 tttaag 106  Q
    ||||||    
T  49003075 tttaag 49003070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 37152838 - 37152730
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| | | ||||||||||    
T  37152838 gcaaatattaatcatttgacttttagtcctaattacatctgattagtaacttcaaggacgaaaattcaaatgacttatatttgcatggatgaaagaccta 37152739  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  37152738 tttaagcca 37152730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 30830431 - 30830323
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||  | ||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||| ||    
T  30830431 gcaaatattaatcatttgaaatatggtcctaattacatctgattagtaactttagggacgaaaattcaaatgacttatatttgcagggacgaaagactta 30830332  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  30830331 tttaagcca 30830323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 1040382 - 1040464
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttg 83  Q
    |||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1040382 gcaaatattaatcatttgacttttggtcctaattacatatgattagtaacttcagggacgaaaattcaaatgacctatatttg 1040464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 1047288 - 1047370
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttg 83  Q
    |||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1047288 gcaaatattaatcatttgacttttggtcctaattacatatgattagtaacttcagggacgaaaattcaaatgacctatatttg 1047370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 2953764 - 2953658
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| |||||||| |||||||| ||||||||| ||||||||||||||| ||||||||||||||||||| |||||||| ||| | ||||||||||    
T  2953764 gcaaatattaatcatttgatttttggtcctaattacatatgattagtaacttcaaggacgaaaattcaaatgacttatatttgtagggatgaaagaccta 2953665  T
Q  101 tttaagc 107  Q
    |||||||    
T  2953664 tttaagc 2953658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 10019673 - 10019565
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||| |||||| |||||    
T  10019673 gcaaatattaatcatttgaaaaatggtcataattacatttgattagcaacttcagggacgaaaattcaaatgacttatatttgcagggacgaaataccta 10019574  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  10019573 tttaagcca 10019565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 52455032 - 52454947
Alignment:
Q  24 tggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  52455032 tggtcataattacatctgattagtaactttagggatgaaaattcaaatgacctatttttgcagggacgaaatacctatttaagcca 52454947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 49989879 - 49989983
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||| | | ||||||||||||||||||||| || | ||||||||||    
T  49989879 gcaaatattaatcatttgacttttggtcctaattacatctgattaataacttcagggatg-agattcaaatgacctatatttgccgg-atgaaagaccta 49989976  T
Q  101 tttaagc 107  Q
    |||||||    
T  49989977 tttaagc 49989983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 24701546 - 24701462
Alignment:
Q  24 tggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  24701546 tggtcctaattacat-tgattaataacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagagctatttaagcca 24701462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 2953781 - 2953849
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  2953781 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcca 2953849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 46849979 - 46850043
Alignment:
Q  45 agtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  46849979 agtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcca 46850043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 49003192 - 49003264
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataat 113  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  49003192 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagccttaat 49003264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 46364641 - 46364574
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  46364641 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 46364574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 5926821 - 5926719
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    ||||||| || ||||||||||||||||| ||||||||| | ||||||||||||||| ||||||||||||| ||| |||||||||||| | |||| |||||    
T  5926821 gcaaatagtaatcatttgacttttggtcctaattacatttaattagtaacttcaggaacgaaaattcaaacgacttatatttgcagggatgaaataccta 5926722  T
Q  101 ttt 103  Q
    |||    
T  5926721 ttt 5926719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 33030400 - 33030334
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  33030400 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggacaaaagacctatttaagcc 33030334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 33030447 - 33030523
Alignment:
Q  30 taattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    ||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||| |||||| |||||||||||    
T  33030447 taattacatctgattagtaacttcagaaacgaaaattcaaatgatctatatttgcagggacgaaaaacctatttaag 33030523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 19755722 - 19755789
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19755722 gattagtaacttcagggataaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 19755789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 33347733 - 33347800
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  33347733 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacctatataagcc 33347800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 5926586 - 5926524
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctattt 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  5926586 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatattt 5926524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 2953531 - 2953462
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccat 110  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  2953531 gattagtaactttagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagccat 2953462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 8890480 - 8890403
Alignment:
Q  30 taattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||| | |||| ||||||||||||    
T  8890480 taattacatctcattagtaacttcatggacgaaaattcaaatgacctatatttgaagggaagaaatacctatttaagc 8890403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 48380748 - 48380675
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataatt 114  Q
    ||||||||||||||| |||||||||||||||||||||||||| || | |||||||||||||||||||| |||||    
T  48380748 gattagtaacttcagcgacgaaaattcaaatgacctatatttacaaggacgaaagacctatttaagccttaatt 48380675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 5926838 - 5926906
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  5926838 gattagtaacttcagggatgaaaattcaaatggtctatatttgcagggacgaaagacctatttaagcca 5926906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 8890525 - 8890593
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||| |||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  8890525 tgattagtcacttcatggacgaatattcaaatgacctatatttgcagggacgaaagacctatttaagcc 8890593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 29043072 - 29043140
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    |||||||||||||||||||||||||||||||| |||||||||||||  ||||||||| |||||||||||    
T  29043072 gattagtaacttcagggacgaaaattcaaatggcctatatttgcagagacgaaagacatatttaagcca 29043140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 35312276 - 35312172
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| ||||||||| |||||||||||||||  ||| ||||||||||||  ||||||||||||| ||||||||||||    
T  35312276 gcaaatattaatcatttgaaaaatggtcttaattacatttgattagtaacttcatcgacaaaaattcaaatggtctatatttgcagggacgaaagaccta 35312177  T
Q  101 tttaa 105  Q
    |||||    
T  35312176 tttaa 35312172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 46545031 - 46544923
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    | ||| ||||| ||||||||||||||||| | |||||||||||||||| || |||||||||||| |||||||| |||    
T  46545031 gcaaatattaatcatttgaaaaatagtcctaattgcatctgattagtaactttatggacgaaaattcaaataacatatatttgcagggacgaaagatcta 46544932  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  46544931 tttaagcca 46544923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 49002943 - 49002879
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  49002943 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 49002879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 12577329 - 12577396
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||| ||||||||||||||||||||    
T  12577329 gattagtaacttcaaggacgaaaatttaaatgacttatatttgcagggacgaaagacctatttaagcc 12577396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 24701337 - 24701270
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||| ||||||||||    
T  24701337 gattagtaacttcagggacgaaaattcaaatgagctatatttgcagagacgaaagacttatttaagcc 24701270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 24701586 - 24701653
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||| | |||||||||||| | ||||||||||||||||||    
T  24701586 gattagtaacttcagggacgaaaattcaaatggcttatatttgcagggatgaaagacctatttaagcc 24701653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 5183573 - 5183507
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    |||||||||||| | ||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  5183573 gattagtaactttatggacgaaaattcaaatgacctatattttcaggaacgaaagacatatttaagc 5183507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 29980955 - 29981021
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    ||||||||||||| |||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  29980955 gattagtaacttccgggacgaaaattcaaatgacctatatttgcaaagacgaaagacctatttaagc 29981021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 33347482 - 33347416
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| ||||||||| ||||||||||    
T  33347482 attagtaacttcagggacgaaagttcaaatgacttatatttgcagggacgaaagacatatttaagcc 33347416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 51934072 - 51933966
Alignment:
Q  3 aaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatt 102  Q
    |||||||| ||||||||    ||||| |||||||||||||| ||||  |||| ||||||||||||||||||| ||||||| |||| ||||||||||| ||    
T  51934072 aaatattaatcatttgaaaaatggtcctaattacatctgatcagtagtttcaaggacgaaaattcaaatgacatatatttccagggacgaaagacctgtt 51933973  T
Q  103 taagcca 109  Q
    |||||||    
T  51933972 taagcca 51933966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6334904 - 6334981
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctat 78  Q
    |||||||||| ||||||||    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  6334904 gcaaatattaatcatttgaaaagtggtcataattacatctgattagtaacttcaaagacgaaaattcaaatgacctat 6334981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 35312042 - 35311977
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||||||||||||||| ||||||||||||||||||||||||||  ||| |||||||||||||||||    
T  35312042 tgattagtaacttcagtgacgaaaattcaaatgacctatatttatagggacgaaagacctatttaa 35311977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 5183823 - 5183891
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| |||||||||||    
T  5183823 gattcgtaacttcagggacgaaaattcaaatggcctatatttgcagggacaaaagacgtatttaagcca 5183891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 46544828 - 46544760
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||  |||||||||||||||||||||||||||||  |||||||||| ||||||||||    
T  46544828 tgattagtaacttcaaagacgaaaattcaaatgacctatatttgcaataacgaaagacttatttaagcc 46544760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 739286 - 739219
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||| |||||| |||||||||||||    
T  739286 gattagtaacttcaaggacgaaaattcaaatggtctatatttgcagggacgaaaaacctatttaagcc 739219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 1047521 - 1047588
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||| | ||||||| ||||||||||    
T  1047521 gattagtaacttcagagacgaaaattcaaatgacctatatttacagggatgaaagacatatttaagcc 1047588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 6056439 - 6056376
Alignment:
Q  45 agtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  6056439 agtaattttagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 6056376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 8890278 - 8890212
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||| || |||||||||||||||||||||||| |||||| |||||||||||||    
T  8890278 gattagtaacttcagggac-aatattcaaatgacctatatttgcagggacgaaatacctatttaagcc 8890212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 33030652 - 33030718
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||| |||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  33030652 gattagtaatttcatggacgaaaattcaaatgatctatatttgcaggaacgaaaga-ctatttaagcc 33030718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 25414911 - 25414834
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataatttttat 119  Q
    ||||||||||||||| || ||||||||||||| |||||||||| ||| ||||||||| |||||||||| ||||||||||    
T  25414911 gattagtaacttcagagaagaaaattcaaatggcctatatttgtagggacgaaagacatatttaagcc-taatttttat 25414834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 37152855 - 37152921
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||||| ||||||||| |||||||||    
T  37152855 gattagtaacttcagagacgaaaattcaaatggactatatttgcagggacgaaagacatatttaagc 37152921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 34176176 - 34176119
Alignment:
Q  48 aacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    ||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  34176176 aacttcaaggacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaa 34176119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 37152605 - 37152544
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatt 102  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||| ||||    
T  37152605 gattagtaacttcatggacgaaaattcaaatgacctatatttgtagggacgaaagacatatt 37152544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 12577078 - 12577010
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||  |||||||||||||||| ||||||||| |||| ||||||||| ||||||||||    
T  12577078 tgattagtaacttcatagacgaaaattcaaatggcctatatttacagggacgaaagacatatttaagcc 12577010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 1040365 - 1040298
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||| |||||||||||| | |||||||||| | ||||||||| ||||||||||    
T  1040365 gattagtaacttcagggacaaaaattcaaatggcttatatttgcaaggacgaaagacatatttaagcc 1040298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 1047271 - 1047204
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||| |||||||||||| | |||||||||| | ||||||||| ||||||||||    
T  1047271 gattagtaacttcagggacaaaaattcaaatggcttatatttgcaaggacgaaagacatatttaagcc 1047204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 26953168 - 26953101
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||   ||||||||||| | ||||||||| ||||||||||    
T  26953168 gattagtaacttcagggacgaaaattcaaatagtctatatttgcaaggacgaaagacatatttaagcc 26953101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 29980706 - 29980635
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccataa 112  Q
    |||||||||||||| || |||||||||||||||||||||||| || | ||||||||| ||||||| ||||||    
T  29980706 gattagtaacttcatgggcgaaaattcaaatgacctatatttacaaggacgaaagacatatttaaaccataa 29980635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 25415161 - 25415227
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||| |||||| |  |||||||||    
T  25415161 gattagtaacttcaggaacgaaaattcaaatgacttatatttgcagggacgaaaaatatatttaagc 25415227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 43713296 - 43713242
Alignment:
Q  355 cctcttttattctgcaaaagcctctaaaatgaaccaagagaaactgctcttatgt 409  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||| ||||    
T  43713296 cctcttttattctgcaaaagcctcttaactgaaccaagagaaactgctctgatgt 43713242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 6056695 - 6056763
Alignment:
Q  41 gattagtaactt-cagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||| |||||| ||||||||||||| | |||||||||||| ||||||||| ||||||||||    
T  6056695 gattagtaacttacagggatgaaaattcaaatggcttatatttgcagggacgaaagacatatttaagcc 6056763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 34175989 - 34175921
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||| ||||||||  ||||||||||||||||||||| |||| || |||| ||||||||||||||||||    
T  34175989 gattaataacttcaatgacgaaaattcaaatgacctaaatttacaagaacaaaagacctatttaagcca 34175921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 739535 - 739602
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||| | |||||||||||||||||||||||||||||  ||||||  | ||||||||||    
T  739535 gattagtaacttcatgtacgaaaattcaaatgacctatatttgcagagacgaaaatcatatttaagcc 739602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 35312293 - 35312360
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||| || |||||||||||||||| |  ||||||| |||||||||||||| ||||||||||    
T  35312293 gattagtaactccaaggacgaaaattcaaataagatatatttacaggaacgaaagacttatttaagcc 35312360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 46849724 - 46849669
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagac 97  Q
    |||| |||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  46849724 attaataacttcagggacgaaaattcaaatgacctatatttacagggacgagagac 46849669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 46545048 - 46545094
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagg 87  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  46545048 gattagtaacttcagggacgaaacttcaaatgacctatatttacagg 46545094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 49990113 - 49990181
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||| ||||||||  |||||||||||||||   ||||||||||||| ||||||||| |||||||||||    
T  49990113 gattaataacttcaaagacgaaaattcaaatagtctatatttgcagggacgaaagacatatttaagcca 49990181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 52454817 - 52454757
Alignment:
Q  47 taacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    |||||||| ||||||||| |||||||||||||||||||| |  |||||||| |||||||||    
T  52454817 taacttcatggacgaaaagtcaaatgacctatatttgcatgggcgaaagacttatttaagc 52454757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 10019690 - 10019729
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatat 80  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  10019690 gattagtaacttcagggatgaaaattcaaatgacctatat 10019729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 100
Target Start/End: Original strand, 46364892 - 46364951
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    ||||||||| |||| |||||||||||||||| || ||||||||||||  |||||||||||    
T  46364892 gattagtaatttcaaggacgaaaattcaaataacttatatttgcaggggcgaaagaccta 46364951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 48380788 - 48380847
Alignment:
Q  24 tggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttg 83  Q
    ||||| ||||||||||||||||||||||||  |||||||| |||||||||  ||||||||    
T  48380788 tggtcctaattacatctgattagtaacttcgtggacgaaatttcaaatgatatatatttg 48380847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 10019439 - 10019375
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    |||||||||||||||| | ||||||| ||||| |||||||||||| | ||||||||||| ||||||    
T  10019439 gattagtaacttcagg-atgaaaatttaaatggcctatatttgcatggacgaaagacctttttaag 10019375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 34176241 - 34176306
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    |||||||||||| ||||| |||||||||||| ||||||||||  | | ||||||| ||||||||||    
T  34176241 gattagtaactttagggatgaaaattcaaattacctatatttatatggacgaaagccctatttaag 34176306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 108
Target Start/End: Original strand, 10019730 - 10019770
Alignment:
Q  68 aaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  10019730 aaatgacctatatttacagggacgaaagacctatttaagcc 10019770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 30830447 - 30830522
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatgacctatatttgc-aggaacgaaagacctatttaagccataattttt 117  Q
    |||||||||||||   ||||||||||||||||||| ||||||||| ||||   ||||||||||||||||| ||| ||||    
T  30830447 tgattagtaactt---ggacgaaaattcaaatgacttatatttgcaaggacaaaaagacctatttaagccttaaatttt 30830522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 46849744 - 46849776
Alignment:
Q  3 aaatattagtcatttgacttttggtcataatta 35  Q
    |||||||||||||||||||||||||||||||||    
T  46849744 aaatattagtcatttgacttttggtcataatta 46849776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 6334723 - 6334656
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||| |   |||||||||||||||  ||||||||||||| | ||||||| ||||||||||    
T  6334723 gattagtaactttaacaacgaaaattcaaatggtctatatttgcagggatgaaagacttatttaagcc 6334656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 37152500 - 37152465
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacct 76  Q
    |||||||||||||| |||||||||||||||||||||    
T  37152500 gattagtaacttcatggacgaaaattcaaatgacct 37152465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 48381000 - 48381067
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||| |||||| | ||||||||||| ||||||  ||||||| |||| ||||||||| ||||||||||    
T  48381000 gattaataactttaaggacgaaaatttaaatgaattatatttacagggacgaaagacttatttaagcc 48381067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 2953548 - 2953582
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataatta 35  Q
    |||||||||| ||||||||||||||||||||||||    
T  2953548 gcaaatattaatcatttgacttttggtcataatta 2953582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 26953419 - 26953484
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagc 107  Q
    ||||||||||||||| | |||||||||||||   |||||||||||| |||||| |  |||||||||    
T  26953419 attagtaacttcaggaatgaaaattcaaatggtttatatttgcagggacgaaatatatatttaagc 26953484  T

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Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 46282138 - 46282069
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccat 110  Q
    ||||||||| |||||||| ||||| ||||| |||||||| || |||| | |||| || ||||||||||||    
T  46282138 gattagtaagttcagggatgaaaaatcaaacgacctataattacagggatgaaaaacatatttaagccat 46282069  T

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Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 72
Target Start/End: Complemental strand, 30830198 - 30830166
Alignment:
Q  40 tgattagtaacttcagggacgaaaattcaaatg 72  Q
    |||||| ||||||||||||||||||||||||||    
T  30830198 tgattattaacttcagggacgaaaattcaaatg 30830166  T

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Target: scaffold1493 (Bit Score: 86; Significance: 6e-41; HSPs: 3)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 893 - 788
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  893 gcaaatattaatcatttgacttttggtcctaattatatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagaccta 794  T
Q  101 tttaag 106  Q
    ||||||    
T  793 tttaag 788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 910 - 977
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||||||||||||||||||||| || |||||| |||| ||||||||| ||||||||||    
T  910 gattagtaacttcagggacgaaaattcaaatggccaatatttacagggacgaaagacatatttaagcc 977  T

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Target: scaffold1493; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 660 - 615
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcag 86  Q
    ||||||||| |||||||| ||||| |||||||||||||| ||||||    
T  660 gattagtaagttcagggatgaaaaatcaaatgacctataattgcag 615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 84; Significance: 9e-40; HSPs: 3)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 10746 - 10849
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  10746 gcaaatattaatcatttgacttttggtcctaactacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagaccta 10845  T
Q  101 ttta 104  Q
    ||||    
T  10846 ttta 10849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 10979 - 11046
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  10979 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 11046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 10729 - 10662
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||| ||| |||||||||||||||||||||| | ||||||||||||   ||||||||||||||||||    
T  10729 gattaataatttcagggacgaaaattcaaatggcttatatttgcaggggtgaaagacctatttaagcc 10662  T

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Target: scaffold0279 (Bit Score: 77; Significance: 1e-35; HSPs: 3)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 11157 - 11049
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  11157 gcaaatattaatcatttgaaaaatggtcttaattacatctgattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagaccta 11058  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  11057 tttaagcca 11049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 10920 - 10853
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10920 gattagtaacttcgtggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 10853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 11175 - 11238
Alignment:
Q  42 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||| |||||||| ||||||||||||||||||||||||||| |||| ||||||||||| |||||    
T  11175 attattaacttcaaggacgaaaattcaaatgacctatatttacagggacgaaagacctgtttaa 11238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 76; Significance: 5e-35; HSPs: 2)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 14192 - 14089
Alignment:
Q  2 caaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctat 101  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||| | |||||||||||    
T  14192 caaatattaatcatttgacttttggtcctaattacatatgatttgtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctat 14093  T
Q  102 ttaa 105  Q
    ||||    
T  14092 ttaa 14089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 13960 - 13893
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||| || || ||||||||||||||| |||||||||| |||  ||||||||| ||||||||||    
T  13960 gattagtaatttgagtgacgaaaattcaaattacctatatttacagagacgaaagacatatttaagcc 13893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 10409 - 10516
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||  |||| || | ||    
T  10409 gcaaatattaatcatttgacttttggtcctaattacatcttattagtaactccagggacgaaaattcaaatgacctatatttgcagagacgatagtcata 10508  T
Q  101 tttaagcc 108  Q
    ||||||||    
T  10509 tttaagcc 10516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 10392 - 10325
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  10392 gattagtaacttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacctatttaagcc 10325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 61; Significance: 5e-26; HSPs: 3)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 8517 - 8625
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| ||||||||    ||||| ||||||||||||||||||||| ||||||||  |||||||||||||  ||||||||||| ||||||||||||    
T  8517 gcaaatattaatcatttgaaaaatggtcctaattacatctgattagtaacatcagggacagaaattcaaatgacagatatttgcagggacgaaagaccta 8616  T
Q  101 tttaagcca 109  Q
    |||||||||    
T  8617 tttaagcca 8625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 8500 - 8435
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 106  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||||||||||    
T  8500 gattagtaacttcagggacgaaaattcaaatgacctatatttaaagagacgaaagacctatttaag 8435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 8749 - 8816
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||| |||||||  ||| | ||||||||||||||||||||| |||| |||||| |||||||||||||    
T  8749 gattaataacttcgcggatggaaattcaaatgacctatatttacagggacgaaatacctatttaagcc 8816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 58; Significance: 3e-24; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 120283 - 120388
Alignment:
Q  1 gcaaatattagtcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagaccta 100  Q
    |||||||||| |||||||| |  || |  ||||||||||||||||||||||||| |||||||||||||||| || |||||||||||| |||||||| |||    
T  120283 gcaaatattaatcatttgaataatgattttaattacatctgattagtaacttcatggacgaaaattcaaataacatatatttgcagggacgaaagatcta 120382  T
Q  101 tttaag 106  Q
    ||||||    
T  120383 tttaag 120388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 120253 - 120208
Alignment:
Q  60 gaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||||||||||||| ||| ||||||||| |||||||||||||||||    
T  120253 gaaaattcaaatgatctacatttgcagggacgaaagacctatttaa 120208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 55 - 108
Target Start/End: Original strand, 120529 - 120582
Alignment:
Q  55 gggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||| ||||||| |||||||||||  ||||||||| ||||||||||    
T  120529 gggacgaaaattgaaatgacatatatttgcagagacgaaagacatatttaagcc 120582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 49; Significance: 7e-19; HSPs: 3)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 14302 - 14238
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 105  Q
    |||||||||| ||| ||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  14302 gattagtaacctcaaggacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaa 14238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 14551 - 14618
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| | ||| ||||||||||||||    
T  14551 gattagtaacttcaaggacgaaaattcaaatgacctatatttacagggaggaaggacctatttaagcc 14618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 14350 - 14427
Alignment:
Q  32 attacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 109  Q
    ||||||||||||||||||||||| ||| |||||||||||||   |||||||||| | |||||||||| ||||| ||||    
T  14350 attacatctgattagtaacttcaaggatgaaaattcaaatggtatatatttgcaaggacgaaagaccaatttatgcca 14427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 12086 - 12019
Alignment:
Q  41 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 108  Q
    ||||| ||||||||||||| |||||| |||||| |||||||| |||  |||||| || ||||||||||    
T  12086 gattactaacttcagggacaaaaatttaaatgatctatatttacagagacgaaaaacatatttaagcc 12019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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