View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2504_low_26 (Length: 394)
Name: NF2504_low_26
Description: NF2504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2504_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 331; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 12 - 376
Target Start/End: Complemental strand, 32240630 - 32240264
Alignment:
| Q |
12 |
tgagatgaaatgaacacagcaagcaccattttatagagaaaaagggca--tatgaatttcatcttttatacacgcagtgtcagaatcaattaaaagaaaa |
109 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32240630 |
tgagatgaaatgaacacagcaagcaccattttatagagaaaaagggcacatatgaatttcatcttttatacacgcagtgtcagaatcaattaaaagaaaa |
32240531 |
T |
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| Q |
110 |
gaagggaaaaatcagtatctctgacccattgccaatagtttcaaacttcctgacacatggtaattaccttttgcagaaaccacatataccctaaaccaga |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32240530 |
gaagggaaaaatcagtatctctgacccattgccaatagtttcaaacttcctgacacatggtaattaccttttgcagaaaccacatataccctaaaccaga |
32240431 |
T |
|
| Q |
210 |
aatttccagcaaatgaagtaaaatttatagtgnnnnnnngacagataaaatgcattgtttaatcaaccaatccaagtgaaaattaaattaaaacaggggg |
309 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32240430 |
aatttccagcaaatgaagtaaaatttatagtgaaaaaaagacagataaaatgcattgtttaatcaaccaatccaagtgaaaattaaattaaaacaggggg |
32240331 |
T |
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| Q |
310 |
atttcagaatctctgaacaaaagacaaaattttcaaaccttctgacaaaagtttaacaccttttata |
376 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32240330 |
gtttcagaatctctgaacaaaagacaaaattttcaaaccttctgacaaaagtttaacaccttttata |
32240264 |
T |
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