View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2504_low_27 (Length: 388)
Name: NF2504_low_27
Description: NF2504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2504_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 354; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 11 - 372
Target Start/End: Complemental strand, 15330884 - 15330523
Alignment:
| Q |
11 |
catcatcaagatgagtcacatgctttcttctctacctttccttgtctaacttacaagctactttccaaatgtaggatctaacacatattaacccatgcaa |
110 |
Q |
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| T |
15330884 |
catcatcaagatgagtcacatgctttcttctctatctttccttgtctaacttacaagctactttccaaatgtaggatctaacacatattaacccatgcaa |
15330785 |
T |
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| Q |
111 |
taatgcttattcacatgcaagttctgagtcattttttcattcttcaatgccatcatttaaatcaataccaaccgcatattttcattgtaaaactattaaa |
210 |
Q |
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| T |
15330784 |
taatgcttattcacatgcaagttctgagtcattttttcattcttcaatgccatcatttaaatcaataccaaccgcatattttcattgtaaaactattaaa |
15330685 |
T |
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| Q |
211 |
ggtatattctctaagatataatatatttaattcatcgcacttttttggtaaccactataaagctattatagtatcattgagttaataatatactttgata |
310 |
Q |
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| T |
15330684 |
ggtatattctctaagatataatatatttaattcatcacacttttttggtaaccactataaagctattatagtatcattgagttaataatatactttgata |
15330585 |
T |
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| Q |
311 |
ttaactttctggacacatgattcaactacctagctagatatatgaagcattcagaacctttt |
372 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15330584 |
ttaactttctggacacatgattcaactacctagctagatatatgaagcattcagaacctttt |
15330523 |
T |
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