View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2504_low_47 (Length: 289)

Name: NF2504_low_47
Description: NF2504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2504_low_47
NF2504_low_47
[»] chr2 (36 HSPs)
chr2 (51-215)||(17783680-17783841)
chr2 (208-289)||(561631-561712)
chr2 (216-289)||(20552931-20553004)
chr2 (214-286)||(30486208-30486280)
chr2 (216-289)||(31438646-31438719)
chr2 (214-286)||(38590990-38591062)
chr2 (207-286)||(31390003-31390082)
chr2 (219-289)||(4381798-4381868)
chr2 (215-289)||(6580188-6580262)
chr2 (215-289)||(22887749-22887823)
chr2 (215-289)||(32360982-32361056)
chr2 (209-286)||(22567595-22567672)
chr2 (216-289)||(43637165-43637237)
chr2 (216-285)||(44587902-44587971)
chr2 (214-289)||(27856509-27856584)
chr2 (214-289)||(32860100-32860175)
chr2 (215-289)||(26891776-26891850)
chr2 (214-283)||(22068438-22068507)
chr2 (209-289)||(26387177-26387257)
chr2 (242-289)||(5881243-5881290)
chr2 (214-289)||(34442645-34442719)
chr2 (215-289)||(1859161-1859235)
chr2 (243-289)||(2898098-2898144)
chr2 (219-289)||(3668226-3668295)
chr2 (216-289)||(8969520-8969591)
chr2 (216-285)||(38296178-38296246)
chr2 (242-289)||(5093652-5093699)
chr2 (221-257)||(3336352-3336388)
chr2 (219-283)||(28600971-28601034)
chr2 (241-289)||(35851864-35851912)
chr2 (242-289)||(11021335-11021382)
chr2 (247-289)||(27584769-27584811)
chr2 (209-275)||(44854467-44854533)
chr2 (214-286)||(4022595-4022666)
chr2 (215-287)||(34123139-34123211)
chr2 (214-254)||(35851917-35851957)
[»] chr7 (34 HSPs)
chr7 (216-289)||(8754698-8754771)
chr7 (216-289)||(1736980-1737053)
chr7 (208-289)||(34333276-34333357)
chr7 (214-285)||(4628564-4628635)
chr7 (214-289)||(12218549-12218624)
chr7 (214-289)||(29993600-29993675)
chr7 (209-289)||(24798516-24798595)
chr7 (214-289)||(34546427-34546502)
chr7 (215-289)||(27456226-27456299)
chr7 (216-289)||(24438477-24438550)
chr7 (216-289)||(34606261-34606334)
chr7 (214-286)||(18485959-18486031)
chr7 (241-289)||(30810680-30810728)
chr7 (215-289)||(5239284-5239358)
chr7 (217-286)||(28587911-28587979)
chr7 (217-289)||(47656981-47657053)
chr7 (244-289)||(11686437-11686482)
chr7 (216-289)||(43594149-43594222)
chr7 (242-286)||(5729372-5729416)
chr7 (219-283)||(28262034-28262098)
chr7 (245-289)||(45045799-45045843)
chr7 (247-286)||(47083086-47083125)
chr7 (215-285)||(47839492-47839561)
chr7 (242-286)||(4100640-4100684)
chr7 (241-285)||(22973623-22973667)
chr7 (216-283)||(6819916-6819982)
chr7 (216-286)||(13064993-13065061)
chr7 (242-289)||(23363280-23363327)
chr7 (243-289)||(4087650-4087696)
chr7 (207-257)||(6097327-6097377)
chr7 (215-289)||(23357820-23357894)
chr7 (215-289)||(37631655-37631729)
chr7 (241-285)||(42044410-42044454)
chr7 (220-288)||(46716642-46716710)
[»] scaffold0014 (1 HSPs)
scaffold0014 (214-289)||(68403-68478)
[»] chr3 (41 HSPs)
chr3 (215-289)||(272219-272293)
chr3 (207-289)||(46352625-46352707)
chr3 (214-289)||(52520679-52520754)
chr3 (215-289)||(49893330-49893404)
chr3 (216-289)||(39074419-39074492)
chr3 (216-289)||(48725271-48725344)
chr3 (216-289)||(2119431-2119504)
chr3 (216-289)||(52246582-52246655)
chr3 (213-289)||(40362693-40362769)
chr3 (214-289)||(18014670-18014745)
chr3 (215-289)||(41304004-41304078)
chr3 (219-289)||(41554053-41554122)
chr3 (208-289)||(42964362-42964443)
chr3 (216-289)||(43786871-43786944)
chr3 (214-289)||(858587-858662)
chr3 (214-285)||(13159895-13159966)
chr3 (216-286)||(4168183-4168253)
chr3 (207-289)||(28139300-28139382)
chr3 (216-285)||(20923992-20924061)
chr3 (241-289)||(2391632-2391680)
chr3 (241-289)||(2393393-2393441)
chr3 (241-289)||(53489937-53489985)
chr3 (218-289)||(43269852-43269923)
chr3 (243-289)||(7468438-7468484)
chr3 (219-289)||(50359299-50359368)
chr3 (243-285)||(52718194-52718236)
chr3 (216-289)||(10617397-10617469)
chr3 (216-289)||(42548096-42548168)
chr3 (222-289)||(50395675-50395742)
chr3 (241-283)||(22248911-22248953)
chr3 (216-289)||(2505350-2505422)
chr3 (216-289)||(23925280-23925353)
chr3 (248-289)||(29241669-29241710)
chr3 (248-289)||(41993732-41993773)
chr3 (216-276)||(2362801-2362861)
chr3 (213-289)||(11308323-11308399)
chr3 (216-286)||(27994416-27994486)
chr3 (216-281)||(38852216-38852279)
chr3 (244-288)||(2938154-2938198)
chr3 (241-289)||(24488391-24488439)
chr3 (254-286)||(31514829-31514861)
[»] chr8 (40 HSPs)
chr8 (216-289)||(12652630-12652703)
chr8 (209-289)||(34228675-34228755)
chr8 (211-289)||(27988612-27988690)
chr8 (211-289)||(28045914-28045992)
chr8 (216-289)||(30675685-30675758)
chr8 (208-289)||(33357242-33357323)
chr8 (214-289)||(168464-168539)
chr8 (214-289)||(13643010-13643085)
chr8 (214-289)||(13743435-13743510)
chr8 (218-289)||(20831666-20831737)
chr8 (215-289)||(43119216-43119290)
chr8 (207-289)||(40831272-40831350)
chr8 (217-289)||(16888657-16888728)
chr8 (214-289)||(4537857-4537932)
chr8 (214-289)||(9063165-9063239)
chr8 (216-289)||(16394174-16394247)
chr8 (216-289)||(37373206-37373278)
chr8 (241-289)||(9254014-9254062)
chr8 (214-286)||(16785085-16785156)
chr8 (217-289)||(21595848-21595919)
chr8 (214-285)||(4648193-4648263)
chr8 (238-289)||(9537937-9537988)
chr8 (214-288)||(10618016-10618090)
chr8 (243-289)||(11112666-11112712)
chr8 (215-289)||(12203854-12203927)
chr8 (215-289)||(12448282-12448355)
chr8 (216-289)||(2805373-2805446)
chr8 (242-286)||(42035097-42035141)
chr8 (214-289)||(29444253-29444328)
chr8 (246-289)||(32113938-32113981)
chr8 (243-289)||(36730471-36730517)
chr8 (248-289)||(16890593-16890634)
chr8 (217-281)||(35695547-35695611)
chr8 (214-289)||(9278210-9278285)
chr8 (215-289)||(3930346-3930419)
chr8 (214-289)||(7304631-7304703)
chr8 (241-286)||(28626793-28626838)
chr8 (216-289)||(29235235-29235308)
chr8 (216-283)||(36923782-36923849)
chr8 (216-289)||(39751584-39751658)
[»] chr5 (23 HSPs)
chr5 (216-289)||(10069969-10070042)
chr5 (214-289)||(13661806-13661881)
chr5 (209-289)||(13470144-13470224)
chr5 (214-289)||(8787337-8787412)
chr5 (214-285)||(35132520-35132591)
chr5 (216-289)||(34650946-34651018)
chr5 (216-289)||(35504353-35504426)
chr5 (214-289)||(10054465-10054540)
chr5 (216-288)||(11958081-11958153)
chr5 (241-289)||(19647771-19647819)
chr5 (216-289)||(12506296-12506369)
chr5 (214-289)||(4837256-4837330)
chr5 (216-289)||(9721720-9721793)
chr5 (216-289)||(21547507-21547579)
chr5 (214-289)||(39069379-39069453)
chr5 (216-289)||(6283562-6283635)
chr5 (244-289)||(31909659-31909704)
chr5 (217-289)||(20175228-20175300)
chr5 (249-289)||(40057340-40057380)
chr5 (249-289)||(40564517-40564557)
chr5 (243-289)||(19436949-19436995)
chr5 (243-276)||(39067062-39067095)
chr5 (214-289)||(21944973-21945049)
[»] scaffold0188 (1 HSPs)
scaffold0188 (217-289)||(6223-6295)
[»] chr6 (34 HSPs)
chr6 (214-289)||(20897946-20898021)
chr6 (215-289)||(27433491-27433565)
chr6 (216-289)||(392096-392169)
chr6 (216-289)||(2580952-2581025)
chr6 (214-289)||(3515764-3515839)
chr6 (214-289)||(18276728-18276802)
chr6 (208-289)||(23402130-23402211)
chr6 (209-289)||(1391291-1391370)
chr6 (218-286)||(2350654-2350722)
chr6 (214-289)||(7851272-7851347)
chr6 (218-289)||(9660988-9661059)
chr6 (214-289)||(34396640-34396715)
chr6 (215-289)||(13529454-13529528)
chr6 (216-289)||(12145230-12145303)
chr6 (216-289)||(21878460-21878533)
chr6 (214-289)||(3026122-3026195)
chr6 (241-289)||(34477663-34477711)
chr6 (214-289)||(4215693-4215768)
chr6 (214-285)||(12525717-12525788)
chr6 (214-289)||(32929621-32929696)
chr6 (219-286)||(32985309-32985376)
chr6 (215-289)||(29451228-29451301)
chr6 (216-285)||(35043890-35043959)
chr6 (241-289)||(26467237-26467285)
chr6 (215-289)||(31280320-31280394)
chr6 (214-287)||(14559920-14559993)
chr6 (220-289)||(34851962-34852030)
chr6 (246-285)||(25165530-25165569)
chr6 (216-286)||(13417078-13417148)
chr6 (216-286)||(23629692-23629761)
chr6 (216-286)||(29978233-29978302)
chr6 (241-285)||(11115212-11115256)
chr6 (219-289)||(3246200-3246270)
chr6 (242-286)||(1840363-1840407)
[»] scaffold0003 (1 HSPs)
scaffold0003 (215-289)||(53798-53872)
[»] chr4 (42 HSPs)
chr4 (207-289)||(789643-789725)
chr4 (215-289)||(18067992-18068066)
chr4 (216-289)||(54897308-54897381)
chr4 (206-289)||(4268935-4269018)
chr4 (214-285)||(12356242-12356313)
chr4 (214-285)||(15186241-15186312)
chr4 (214-289)||(43944505-43944580)
chr4 (215-289)||(4089141-4089215)
chr4 (216-289)||(28755621-28755693)
chr4 (216-289)||(32217045-32217118)
chr4 (216-289)||(54054548-54054621)
chr4 (214-289)||(16536046-16536121)
chr4 (214-289)||(29591187-29591262)
chr4 (214-289)||(43202496-43202571)
chr4 (214-289)||(47231985-47232060)
chr4 (216-286)||(24679758-24679827)
chr4 (216-289)||(3783614-3783687)
chr4 (214-286)||(7768936-7769008)
chr4 (214-289)||(6164092-6164166)
chr4 (246-289)||(39843937-39843980)
chr4 (216-289)||(32202593-32202666)
chr4 (241-289)||(42898859-42898907)
chr4 (214-289)||(33108786-33108860)
chr4 (239-285)||(1432659-1432705)
chr4 (216-286)||(4220195-4220265)
chr4 (214-288)||(52533899-52533973)
chr4 (241-286)||(54655992-54656037)
chr4 (241-286)||(54945894-54945939)
chr4 (217-285)||(19503222-19503289)
chr4 (214-289)||(46688318-46688398)
chr4 (215-289)||(50167590-50167662)
chr4 (219-289)||(50619089-50619159)
chr4 (215-289)||(55882683-55882756)
chr4 (246-286)||(37987965-37988005)
chr4 (214-285)||(5091727-5091798)
chr4 (246-289)||(36395129-36395172)
chr4 (219-286)||(42815113-42815179)
chr4 (215-286)||(49915158-49915229)
chr4 (243-286)||(53655994-53656037)
chr4 (247-285)||(52697083-52697121)
chr4 (241-286)||(30154279-30154323)
chr4 (51-103)||(49942659-49942711)
[»] chr1 (48 HSPs)
chr1 (215-289)||(29657770-29657844)
chr1 (216-289)||(17333395-17333467)
chr1 (214-289)||(15227737-15227812)
chr1 (214-289)||(42770103-42770178)
chr1 (215-289)||(29210412-29210486)
chr1 (216-289)||(24178576-24178649)
chr1 (209-289)||(18043155-18043235)
chr1 (214-289)||(9266841-9266916)
chr1 (214-289)||(12072175-12072250)
chr1 (214-289)||(30657606-30657681)
chr1 (216-289)||(5694321-5694394)
chr1 (217-289)||(19011109-19011180)
chr1 (214-289)||(29683193-29683269)
chr1 (209-289)||(38335163-38335242)
chr1 (214-286)||(51065864-51065936)
chr1 (242-289)||(3784826-3784873)
chr1 (214-289)||(14350390-14350465)
chr1 (218-289)||(38702046-38702117)
chr1 (215-289)||(13961211-13961284)
chr1 (208-286)||(43286714-43286792)
chr1 (215-284)||(19031933-19032002)
chr1 (216-289)||(30294494-30294567)
chr1 (216-289)||(38162850-38162923)
chr1 (245-289)||(3097688-3097732)
chr1 (217-289)||(10976015-10976087)
chr1 (242-286)||(47010019-47010063)
chr1 (242-289)||(26228219-26228266)
chr1 (215-286)||(45431278-45431348)
chr1 (214-289)||(51368898-51368973)
chr1 (214-286)||(6770335-6770407)
chr1 (218-286)||(23473580-23473648)
chr1 (216-279)||(28481844-28481907)
chr1 (209-289)||(35985734-35985813)
chr1 (210-286)||(52749596-52749672)
chr1 (218-289)||(36446438-36446508)
chr1 (214-289)||(39912392-39912467)
chr1 (214-281)||(41730303-41730370)
chr1 (214-275)||(28726032-28726094)
chr1 (215-289)||(48071482-48071555)
chr1 (244-285)||(15282631-15282672)
chr1 (248-289)||(47532783-47532824)
chr1 (249-289)||(39497340-39497380)
chr1 (246-289)||(8473027-8473070)
chr1 (219-282)||(14881086-14881149)
chr1 (216-257)||(38595898-38595939)
chr1 (241-286)||(39081826-39081871)
chr1 (219-275)||(48383238-48383294)
chr1 (249-289)||(50128285-50128325)
[»] scaffold0264 (1 HSPs)
scaffold0264 (209-285)||(22954-23030)
[»] scaffold0021 (1 HSPs)
scaffold0021 (214-289)||(116202-116277)
[»] scaffold0674 (1 HSPs)
scaffold0674 (241-289)||(8010-8058)
[»] scaffold0549 (1 HSPs)
scaffold0549 (241-289)||(7313-7361)
[»] scaffold0190 (1 HSPs)
scaffold0190 (216-288)||(14896-14968)
[»] scaffold0002 (1 HSPs)
scaffold0002 (214-285)||(147022-147093)
[»] scaffold0045 (2 HSPs)
scaffold0045 (216-286)||(50548-50618)
scaffold0045 (243-289)||(53459-53505)
[»] scaffold0206 (1 HSPs)
scaffold0206 (215-289)||(11083-11155)
[»] scaffold1266 (1 HSPs)
scaffold1266 (215-289)||(292-365)
[»] scaffold0034 (1 HSPs)
scaffold0034 (209-286)||(95700-95777)
[»] scaffold0524 (1 HSPs)
scaffold0524 (242-289)||(851-898)
[»] scaffold1152 (1 HSPs)
scaffold1152 (215-285)||(677-747)
[»] scaffold0113 (1 HSPs)
scaffold0113 (249-289)||(40952-40992)
[»] scaffold0050 (1 HSPs)
scaffold0050 (241-285)||(69251-69295)
[»] scaffold0325 (1 HSPs)
scaffold0325 (241-289)||(17583-17631)


Alignment Details
Target: chr2 (Bit Score: 128; Significance: 3e-66; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 17783841 - 17783680
Alignment:
Q  51 gagattaatcactcttaaacggtgatggatacttcataccaatatcatggtaacaaacaaacnnnnnnnttgatgcactcatttgtttatatatctgttg 150  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||| |||    
T  17783841 gagattaatcactcttaaacggcgatggatacttcataccaatatcatggtaacaaacaaa---aaaaattgatgcactcatttgtttatatatctattg 17783745  T
Q  151 tataaagagagctatgtttaatgcttgaattctttgatattacaaggtttacatttataaaagaa 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17783744 tataaagagagctatgtttaatgcttgaattctttgatattacaaggtttacatttataaaagaa 17783680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 561712 - 561631
Alignment:
Q  208 taaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||| |||||||||||||||||||||||  | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  561712 taaaaaaagggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 561631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 20552931 - 20553004
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||  | |||||||||||||||||||||||| |||||||||||||| |||||||||    
T  20552931 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcat 20553004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 30486208 - 30486280
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    ||||||||||||||| |||||||  | |||||||||||||||||||||||| |||||||||||||||||||||    
T  30486208 aagggaaatgctaactggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatg 30486280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 31438646 - 31438719
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||| |  | |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  31438646 gggaaatgctaaccggtgctcccggggcactggttaaggatatgaaaaaggaaattatacagtagttaatgcat 31438719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 286
Target Start/End: Complemental strand, 38591062 - 38590990
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||||||||||||||||||| || || ||||||||||||| |||||||||| ||||||||| |||||||||||    
T  38591062 aagggaaatgctaaccggtgtccctggggcactggttaagaatatgaaaaaggaaattatacagtagttaatg 38590990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 31390003 - 31390082
Alignment:
Q  207 ataaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||||| ||||||||||||||| ||||||   | |||||| ||||||||||||||||| |||||||||||||||||||||    
T  31390003 ataaaataagggaaatgctaactggtgcctccggggcactagttaaggatatgaaaaaggaaattatatagtagttaatg 31390082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 219 - 289
Target Start/End: Original strand, 4381798 - 4381868
Alignment:
Q  219 aaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||  |  ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  4381798 aaatgctaaccggtgcccccggtgcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 4381868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 6580188 - 6580262
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||| ||||||  | |||||||||||||| ||||||||| |||| |||||||||||||||||||    
T  6580188 agggaaatgctaaccagtgccccgggggcactggttaagggtatgaaaaaggaaactatatagtagttaatgcat 6580262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 22887749 - 22887823
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||| ||||   | |||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  22887749 agggaaatgctaaccgatgcctccggggcagtggttaaggatatgaaaaaagaaattatatagtagttaatgcat 22887823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 32361056 - 32360982
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||||  | |||||||||||||||| |||||||  |||||||||| ||||||||||||    
T  32361056 agggaaatgctaaccggtgcccccggggcactggttaaggatgtgaaaaagaaaattatataatagttaatgcat 32360982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 22567595 - 22567672
Alignment:
Q  209 aaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||| ||||||||||||||| | ||||| |  | |||||||||||||||||||||| |||||||||||||||||||||    
T  22567595 aaaaaaagggaaatgctaactgatgcccctaagacactggttaaggatatgaaaaaagaaattatatagtagttaatg 22567672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 43637165 - 43637237
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||  | | ||||||||||||||||||| || ||||||||||||||||||||||||    
T  43637165 gggaaatgctaaccggtgcccc-gagacactggttaaggatatgaataaggaaattatatagtagttaatgcat 43637237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 44587902 - 44587971
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    |||||||||||||||||||||  | ||||| |||||||||||| ||||| ||||||||||||||||||||    
T  44587902 gggaaatgctaaccggtgcccccggggcaccggttaaggatataaaaaaggaaattatatagtagttaat 44587971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 27856584 - 27856509
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||| ||||||||||||  | |||||||||||||  ||||||||| ||||||||||| ||||||||||||    
T  27856584 aagggaaatgttaaccggtgcccccggggcactggttaagagtatgaaaaaggaaattatataatagttaatgcat 27856509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 32860100 - 32860175
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||| ||||||||||||  | ||||| |||||||||||| ||||| |||||||||||||| |||||||||    
T  32860100 aagggaaatgttaaccggtgccccgggggcacgggttaaggatataaaaaaggaaattatatagtatttaatgcat 32860175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 26891850 - 26891776
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||||  | | ||||| |||||||||| ||||| ||||||||||| ||||||||||||    
T  26891850 agggaaatgctaaccggtgcccccgggacactgattaaggatataaaaaaggaaattatatattagttaatgcat 26891776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 22068507 - 22068438
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagtta 283  Q
    |||||||||||||||  ||||||  | |||||||||||||||||||||||| | ||||||||||||||||    
T  22068507 aagggaaatgctaacaagtgcccccggggcactggttaaggatatgaaaaagggaattatatagtagtta 22068438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 26387257 - 26387177
Alignment:
Q  209 aaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||| ||||||||||||||| ||||||   |  | ||| ||||||||||||||||| ||||||||||||||||||||||||    
T  26387257 aaaataagggaaatgctaactggtgcctccgaagtacttgttaaggatatgaaaaaggaaattatatagtagttaatgcat 26387177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 5881243 - 5881290
Alignment:
Q  242 gcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  5881243 gcacaggttaaggatatgaaaaaggaaattatatagtagttaatgcat 5881290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 34442719 - 34442645
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||  | |||||  |||||||||||||||||  | |||||||||||||||||||||    
T  34442719 aagggaaatgctaaccggtgccccgg-ggcacatgttaaggatatgaaaaagaagattatatagtagttaatgcat 34442645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 1859161 - 1859235
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||| |||||||  | || | ||||||||||||| ||||| |||||| |||||||||||||||||    
T  1859161 agggaaatgctaactggtgcccccggggtaatggttaaggatataaaaaaagaaattgtatagtagttaatgcat 1859235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 2898098 - 2898144
Alignment:
Q  243 cactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||    
T  2898098 cactggttaaggatatgaaaaagaaaattatatagtagttaatgcat 2898144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 3668295 - 3668226
Alignment:
Q  219 aaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||  | | |||||||||||| |||| |||| ||||||||||||||||||||||||    
T  3668295 aaatgctaaccggtgcccccg-gacactggttaagggtatggaaaaggaaattatatagtagttaatgcat 3668226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 8969591 - 8969520
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||| ||||||  |  ||||| |||||||||||||||||  |||||||||||||||||||||||    
T  8969591 gggaaatgctaaccagtgccccgg--gcactagttaaggatatgaaaaagaaaattatatagtagttaatgcat 8969520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 38296178 - 38296246
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    |||||||||||||||||| | ||| |||||||||||| |||||||||||  ||||||||||||| |||||    
T  38296178 gggaaatgctaaccggtgtc-ttggggcactggttaaagatatgaaaaagaaaattatatagtaattaat 38296246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 5093699 - 5093652
Alignment:
Q  242 gcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  5093699 gcactagttaaggatatgaaaaaggaaattaaatagtagttaatgcat 5093652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 257
Target Start/End: Original strand, 3336352 - 3336388
Alignment:
Q  221 atgctaaccggtgcccttgtggcactggttaaggata 257  Q
    ||||||||||||||||||||| |||||||||||||||    
T  3336352 atgctaaccggtgcccttgtgacactggttaaggata 3336388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 28600971 - 28601034
Alignment:
Q  219 aaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagtta 283  Q
    ||||||||||| ||||||  | |||||||||||||||||||||||| | ||||||| ||||||||    
T  28600971 aaatgctaaccagtgcccggg-ggcactggttaaggatatgaaaaagggaattataaagtagtta 28601034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 35851912 - 35851864
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||| |||||||||| ||||||| ||||||||||| ||||||||||||    
T  35851912 ggcaccggttaaggatgtgaaaaaggaaattatataatagttaatgcat 35851864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 11021382 - 11021335
Alignment:
Q  242 gcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||| |||| ||||||||||| |||||||||| |||||||||||||    
T  11021382 gcactgattaaagatatgaaaaaagaaattatatggtagttaatgcat 11021335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 289
Target Start/End: Original strand, 27584769 - 27584811
Alignment:
Q  247 ggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||  ||||||||||||||||||| ||||    
T  27584769 ggttaaggatatgaaaagggaaattatatagtagttaaagcat 27584811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 275
Target Start/End: Complemental strand, 44854533 - 44854467
Alignment:
Q  209 aaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatat 275  Q
    |||| ||||||||||||||||||| | |  | |||||||||||||||||  ||||| ||||||||||    
T  44854533 aaaataagggaaatgctaaccggtactcccggggcactggttaaggataataaaaaggaaattatat 44854467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 286
Target Start/End: Complemental strand, 4022666 - 4022595
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    ||||||||||||||| |||||||  | |  |||| ||||| |||||||||| ||||||| |||||||||||||    
T  4022666 aagggaaatgctaactggtgcccacgggatactgattaagaatatgaaaaaagaaatta-atagtagttaatg 4022595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 287
Target Start/End: Complemental strand, 34123211 - 34123139
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgc 287  Q
    |||||||||||||||||||||   | || ||||||| || |||  ||||| ||||||||||| ||||||||||    
T  34123211 agggaaatgctaaccggtgcctccggggtactggttgagcatactaaaaaagaaattatataatagttaatgc 34123139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 35851957 - 35851917
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaagg 254  Q
    |||||||||||||||||||||||  | ||||||||||||||    
T  35851957 aagggaaatgctaaccggtgcccccggggcactggttaagg 35851917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 8e-27; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 8754771 - 8754698
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8754771 gggaaatgctaaccggtgccctgggagcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 8754698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 1736980 - 1737053
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||   || |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1736980 gggaaatgctaaccggtgcttctggggcactggttaaggatatgaaaaatgaaattatataatagttaatgcat 1737053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 34333276 - 34333357
Alignment:
Q  208 taaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||| |||||||||||||||||||||||  | |||||||||||||| ||||||||| |||||||||||||| |||||||||    
T  34333276 taaaataagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtaattaatgcat 34333357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 4628564 - 4628635
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    ||||||||||||||||| ||||| || ||||| |||||||||||||||||| ||||||||||||||||||||    
T  4628564 aagggaaatgctaaccgatgcccctggggcaccggttaaggatatgaaaaaggaaattatatagtagttaat 4628635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 12218624 - 12218549
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||  | |||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  12218624 aagggaaatgctaaccggtgcccccggggcactggataagtatatgaaaaaggaaattatatagtagttaatgcat 12218549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 29993675 - 29993600
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||| |||||||  | ||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  29993675 aagggaaatgctaacgggtgcccccggggcaccggttaaggatatgaaaaaggaaattatatagtagttaatgcat 29993600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 24798595 - 24798516
Alignment:
Q  209 aaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||| |||||||||||||||||||||||  | |||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  24798595 aaaataagggaaatgctaaccggtgcccccg-ggcacttgttgaggatatgaaaaaggaaattatatagtagttaatgcat 24798516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 34546502 - 34546427
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||| |||||  | || || |||||||||||||||||| ||||||||||||||||||||||||    
T  34546502 aagggaaatgctaaccgatgcccccgaggtaccggttaaggatatgaaaaaggaaattatatagtagttaatgcat 34546427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 27456299 - 27456226
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||| |||||||  | ||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  27456299 agggaaatgctaactggtgcccccg-ggcactggttaaggatatggaaaaagaaattatatagtagttaatgcat 27456226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 24438477 - 24438550
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||  | |||||| ||||||| ||||||||| |||| |||||||||||||||||||    
T  24438477 gggaaatgctaaccggtgcccccggggcactagttaagggtatgaaaaaggaaactatatagtagttaatgcat 24438550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 34606261 - 34606334
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||| ||||||   | |||||||||||||||||||||||| |||||||||||||| |||||||||    
T  34606261 gggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcat 34606334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 18485959 - 18486031
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||||||||||||||||||||||  | ||||||||||||||||||  |||| |||||||||||||| ||||||    
T  18485959 aagggaaatgctaaccggtgcccccggggcactggttaaggatattgaaaaggaaattatatagtaattaatg 18486031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 289
Target Start/End: Original strand, 30810680 - 30810728
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30810680 ggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 30810728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 5239284 - 5239358
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||   |  ||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  5239284 agggaaatgctaaccggtgcctccggagcactggttaatggtatgaaaaaggaaattatatagtagttaatgcat 5239358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 28587911 - 28587979
Alignment:
Q  217 ggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    ||||||||||||||||||||  | | |||||||||||||||||||||| |||||||||||||||| ||||    
T  28587911 ggaaatgctaaccggtgcccccg-gacactggttaaggatatgaaaaaggaaattatatagtagtcaatg 28587979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 47656981 - 47657053
Alignment:
Q  217 ggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||    | ||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  47656981 ggaaatgctaaccggtgcttcgggggcactggttaaggatatgaaaaagaaaattatatagtaattaatgcat 47657053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 11686482 - 11686437
Alignment:
Q  244 actggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  11686482 actggttaaggatataaaaaaggaaattatatagtagttaatgcat 11686437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 43594222 - 43594149
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||| ||  |   |||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  43594222 gggaaatgctaaccggtgtccccggaacactggttaaggatataaaaaaggaaattatataatagttaatgcat 43594149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 5729372 - 5729416
Alignment:
Q  242 gcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||    
T  5729372 gcactggttaaggatatgaaaaaggaaattatataatagttaatg 5729416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 28262034 - 28262098
Alignment:
Q  219 aaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagtta 283  Q
    |||||||||||||||||   | | ||| |||||||||||||||||| ||||||||||||||||||    
T  28262034 aaatgctaaccggtgcctccgggtcaccggttaaggatatgaaaaaggaaattatatagtagtta 28262098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 45045799 - 45045843
Alignment:
Q  245 ctggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||| |||||||||||||||||||||||| |||||||||    
T  45045799 ctggttaagggtatgaaaaatgaaattatatagtaattaatgcat 45045843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 286
Target Start/End: Original strand, 47083086 - 47083125
Alignment:
Q  247 ggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  47083086 ggttaaggatatgaaaaaagaaattatatagtagttaatg 47083125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 47839492 - 47839561
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    ||||||||||||||||||| ||  | || ||||||||||||||||||||| ||| ||||||| ||||||||    
T  47839492 agggaaatgctaaccggtgtcccgg-ggtactggttaaggatatgaaaaaggaatttatataatagttaat 47839561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 4100684 - 4100640
Alignment:
Q  242 gcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||| |||||||||||||||||| |||||||||||||| ||||||    
T  4100684 gcaccggttaaggatatgaaaaaggaaattatatagtaattaatg 4100640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 22973623 - 22973667
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||||    
T  22973623 ggcactggttaatgatataaaaaaagaaattatatagtagttaat 22973667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 6819916 - 6819982
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagtta 283  Q
    ||||||||||||| |||||||||| |||  ||||||||||| | ||||| ||||||||| ||||||||    
T  6819916 gggaaatgctaactggtgcccttggggctttggttaaggatgttaaaaa-gaaattatacagtagtta 6819982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 286
Target Start/End: Complemental strand, 13065061 - 13064993
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||||||||||||||||||||  |  | | ||||||||||||||||||| ||||||||||| || ||||||    
T  13065061 gggaaatgctaaccggtgcccacg--gtattggttaaggatatgaaaaaggaaattatataatatttaatg 13064993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 23363327 - 23363280
Alignment:
Q  242 gcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||| |||||||||| |||||| |||||| |||||||||||||||||    
T  23363327 gcactcgttaaggataagaaaaaggaaattgtatagtagttaatgcat 23363280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 4087650 - 4087696
Alignment:
Q  243 cactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||| |||  ||||| ||||||||||||||||||||||||    
T  4087650 cactggttaagcatactaaaaaggaaattatatagtagttaatgcat 4087696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 6097327 - 6097377
Alignment:
Q  207 ataaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggata 257  Q
    |||||| ||||||||||||||||| |||||  | |||||||||||||||||    
T  6097327 ataaaataagggaaatgctaaccgatgcccccggggcactggttaaggata 6097377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 23357894 - 23357820
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||| |||||||| ||  ||  | ||| |||||||||||||||||  ||||| |||||||||||||||||    
T  23357894 agggaaatgttaaccggttcctctggagtactcgttaaggatatgaaaaagaaaattgtatagtagttaatgcat 23357820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 37631729 - 37631655
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||| ||||||||||    | ||||| |||||||||||| ||||| ||||||||||| || |||||||||    
T  37631729 agggaaatgttaaccggtgcttccggggcacgggttaaggatataaaaaaggaaattatataataattaatgcat 37631655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 285
Target Start/End: Complemental strand, 42044454 - 42044410
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    ||||| |||||| | ||||||||| ||||||||||||||||||||    
T  42044454 ggcaccggttaaaggtatgaaaaaagaaattatatagtagttaat 42044410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 46716642 - 46716710
Alignment:
Q  220 aatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgca 288  Q
    ||||||||| |||||||| |  ||| ||||||| ||||| ||||| ||||||||||| || ||||||||    
T  46716642 aatgctaactggtgccctcggagcattggttaaagatataaaaaaggaaattatataatacttaatgca 46716710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 68478 - 68403
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||| |||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  68478 aagggaaatgctaactggtgcccccggggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 68403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 5e-25; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 272219 - 272293
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||||  | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  272219 agggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 272293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 207 - 289
Target Start/End: Original strand, 46352625 - 46352707
Alignment:
Q  207 ataaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||| |||||||||||||||||||||||  | |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  46352625 ataaaaaaagggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatacagtagttaatgcat 46352707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 52520679 - 52520754
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||  | |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  52520679 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 52520754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 49893330 - 49893404
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||||  | |||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  49893330 agggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcat 49893404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 39074419 - 39074492
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||  | |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  39074419 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 39074492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 48725271 - 48725344
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||  | |||||||||||||||||||||||| |||||||||||||| |||||||||    
T  48725271 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcat 48725344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 2119431 - 2119504
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||| ||||||||| ||| | |||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  2119431 gggaaatgttaaccggtgtcctcgaggcactggttaaagatatgaaaaaggaaattatatagtagttaatgcat 2119504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 52246582 - 52246655
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||| ||||||   | |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  52246582 gggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaatgaaattatatagttgttaatgcat 52246655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 40362769 - 40362693
Alignment:
Q  213 gaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||| |||||   | ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  40362769 gaagggaaatgctaacccgtgcctccggggcactgattaaggatatgaaaaaagaaattatatagtagttaatgcat 40362693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 18014670 - 18014745
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||| |||||||  | ||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  18014670 aagggaaatgctaactggtgcccccggggcactgattaaggatatgaaaaagtaaattatatagtagttaatgcat 18014745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 41304004 - 41304078
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||   | |||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  41304004 agggaaatgctaaccggtgcctccggggcagtggttaaggatatgaaaaaggaaattatatagtaattaatgcat 41304078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 41554122 - 41554053
Alignment:
Q  219 aaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||| |||||||  ||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  41554122 aaatgctaactggtgccccggtg-cactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 41554053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 42964443 - 42964362
Alignment:
Q  208 taaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||| ||||||| |||| |||||    | ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42964443 taaaagaaaggaaatgttaactggtgcttccggggcactggttaaggatatgaaaaatgaaattttatagtagttaatgcat 42964362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 43786871 - 43786944
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||   | |||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  43786871 gggaaatgctaaccggtgcctccggggcactggttaatggtatgaaaaaggaaattatatagtagttaatgcat 43786944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 858587 - 858662
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||| |||||||||||     ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  858587 aagggaaatgcaaaccggtgcccccagtgcactagttaaggatatgaaaaaggaaattatatagtagttaatgcat 858662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 13159895 - 13159966
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    ||||||||||||||||||||| | || ||  || ||||||||||||||||| ||||||||||||||||||||    
T  13159895 aagggaaatgctaaccggtgctcctggggttctagttaaggatatgaaaaaggaaattatatagtagttaat 13159966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 286
Target Start/End: Original strand, 4168183 - 4168253
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    ||||||||||||||||||||   | || ||||||||||||||| ||||| |||||||||||||||||||||    
T  4168183 gggaaatgctaaccggtgcctccggggaactggttaaggatataaaaaaggaaattatatagtagttaatg 4168253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 289
Target Start/End: Original strand, 28139300 - 28139382
Alignment:
Q  207 ataaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||| | ||||||||||||| |||||||    | |||||||||||||||||||||| ||||||| ||||||||||||||||    
T  28139300 ataaaatatgggaaatgctaactggtgcccccaagacactggttaaggatatgaaaaaagaaattaaatagtagttaatgcat 28139382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 20923992 - 20924061
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    |||||||||||||||||||    | |||||||||||||| ||||||||| ||||||||||||||||||||    
T  20923992 gggaaatgctaaccggtgcttccggggcactggttaagggtatgaaaaaggaaattatatagtagttaat 20924061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 289
Target Start/End: Original strand, 2391632 - 2391680
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  2391632 ggcactggttaaggataagaaaaaggaaattatatagtagttaatgcat 2391680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 289
Target Start/End: Original strand, 2393393 - 2393441
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  2393393 ggcactggttaaggataagaaaaaggaaattatatagtagttaatgcat 2393441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 53489985 - 53489937
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  53489985 ggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 53489937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 43269923 - 43269852
Alignment:
Q  218 gaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||| ||||||||||| | |  ||||||||||||||||||||||  ||||||| ||||||||||||||||    
T  43269923 gaaatgttaaccggtgccttcggagcactggttaaggatatgaaaagggaaattacatagtagttaatgcat 43269852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 7468438 - 7468484
Alignment:
Q  243 cactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  7468438 cactggttaaggaaatgaaaaaggaaattatatagtagttaatgcat 7468484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 50359368 - 50359299
Alignment:
Q  219 aaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||| |||||||  |||||||||||||||| || ||||||  |||||||||||||||||||||||    
T  50359368 aaatgctaactggtgcccc-gtggcactggttaaggttaagaaaaaaaaaattatatagtagttaatgcat 50359299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 52718194 - 52718236
Alignment:
Q  243 cactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  52718194 cactggttaaggatatgaaaaaggaaattatatagtagttaat 52718236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 10617469 - 10617397
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||| ||||||||||||  | | ||||| |||||||||| ||||| ||||||||||||||||||||||||    
T  10617469 gggaaatgttaaccggtgcccccg-gacactgattaaggatataaaaaaggaaattatatagtagttaatgcat 10617397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 42548096 - 42548168
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||| ||| |||| | | ||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  42548096 gggaaatgctagccgatgcc-tcgaggcactgcttaaagatatgaaaaaagaaattatatagtagttaatgcat 42548168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 50395742 - 50395675
Alignment:
Q  222 tgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||  | | ||||||||| ||||||||||||  |||||||| ||||||||||||||    
T  50395742 tgctaaccggtgcccccgggacactggttagggatatgaaaaagaaaattatacagtagttaatgcat 50395675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 283
Target Start/End: Original strand, 22248911 - 22248953
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagtta 283  Q
    |||||| ||||||||||||||||| ||||||||||||||||||    
T  22248911 ggcactagttaaggatatgaaaaaggaaattatatagtagtta 22248953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 2505350 - 2505422
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||| ||| | || | || ||||||| ||||||||||| |||||||||||||||||| |||||    
T  2505350 gggaaatgctaaccgctgctcctg-gacattggttaaagatatgaaaaaggaaattatatagtagttagtgcat 2505422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 23925280 - 23925353
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||| ||| |||  | || |||||||||| |||| ||||| |||||||||||||| |||||||||    
T  23925280 gggaaatgctaactggtacccccggggaactggttaagaatataaaaaaggaaattatatagtaattaatgcat 23925353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 29241669 - 29241710
Alignment:
Q  248 gttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  29241669 gttaaggatatgaaaatggaaattatatagtagttaatgcat 29241710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 41993773 - 41993732
Alignment:
Q  248 gttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||| |||| ||||||||||||||||||||||||||||||    
T  41993773 gttaagtatattaaaaatgaaattatatagtagttaatgcat 41993732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 276
Target Start/End: Original strand, 2362801 - 2362861
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatata 276  Q
    ||||||||||||||||||| |  |  ||| ||||||||||||||||||| |||||||||||    
T  2362801 gggaaatgctaaccggtgctcccggtgcaatggttaaggatatgaaaaaggaaattatata 2362861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 11308399 - 11308323
Alignment:
Q  213 gaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||     | | ||||| |||||||| ||||||| ||||||||||| ||||||||||||    
T  11308399 gaagggaaatgctaaccggtgtttccgggacactgattaaggatgtgaaaaaggaaattatataatagttaatgcat 11308323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 286
Target Start/End: Complemental strand, 27994486 - 27994416
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||||||| |||||| |||||  | |||||||||||||||||  ||||| |||||| ||||||| ||||||    
T  27994486 gggaaatgttaaccgatgcccccggggcactggttaaggatactaaaaaagaaattttatagtaattaatg 27994416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 281
Target Start/End: Original strand, 38852216 - 38852279
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagt 281  Q
    ||||||||||||||||| |||  | | || | ||||||||||| ||||||||||||||||||||||    
T  38852216 gggaaatgctaaccggtcccc--gggacattcgttaaggatataaaaaatgaaattatatagtagt 38852279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 2938198 - 2938154
Alignment:
Q  244 actggttaaggatatgaaaaatgaaattatatagtagttaatgca 288  Q
    ||||||||| ||||| |||||  ||||||||||||||||||||||    
T  2938198 actggttaaagatataaaaaagaaaattatatagtagttaatgca 2938154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 289
Target Start/End: Original strand, 24488391 - 24488439
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||| || | ||||| ||||||||||| ||||||||||||    
T  24488391 ggcactggttaagaatgtaaaaaaggaaattatataatagttaatgcat 24488439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 286
Target Start/End: Original strand, 31514829 - 31514861
Alignment:
Q  254 gatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||||||||||| ||||||||||||||||||||    
T  31514829 gatatgaaaaataaaattatatagtagttaatg 31514861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 12652630 - 12652703
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12652630 gggaaatgctaaccggtgcccctggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 12652703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 34228675 - 34228755
Alignment:
Q  209 aaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||| |||||||||||||||||||||  | |||||||||||||||||||||||| |||||||||||||| |||||||||    
T  34228675 aaaagatgggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcat 34228755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 211 - 289
Target Start/End: Complemental strand, 27988690 - 27988612
Alignment:
Q  211 aagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||||   | |||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  27988690 aagaagggaaatgctaaccggtgcctccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcat 27988612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 211 - 289
Target Start/End: Complemental strand, 28045992 - 28045914
Alignment:
Q  211 aagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||||   | |||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  28045992 aagaagggaaatgctaaccggtgcctccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcat 28045914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 30675758 - 30675685
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||  | |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  30675758 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 30675685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 33357323 - 33357242
Alignment:
Q  208 taaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||| ||||||||||||||| |||||||  |  ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33357323 taaaataagggaaatgctaactggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 33357242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 168464 - 168539
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||||   | |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  168464 aagggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 168539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 13643010 - 13643085
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||| ||||||||||||||||||  | ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  13643010 aaggaaaatgctaaccggtgcccccggggcactggttaaggatacgaaaaaggaaattatatagtagttaatgcat 13643085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 13743435 - 13743510
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||| ||||||||||||||||||  | ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  13743435 aaggaaaatgctaaccggtgcccccggggcactggttaaggatacgaaaaaggaaattatatagtagttaatgcat 13743510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 20831737 - 20831666
Alignment:
Q  218 gaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||  | | |||||||||||||||||||||| ||||||||||||||||||||||||    
T  20831737 gaaatgctaaccggtgcccccgggacactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 20831666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 43119216 - 43119290
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||||| | ||||||| |||| |||||||||||  |||||||||||||||||||||||    
T  43119216 agggaaatgctaaccggtgccctcggggcactgattaaagatatgaaaaagaaaattatatagtagttaatgcat 43119290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 207 - 289
Target Start/End: Original strand, 40831272 - 40831350
Alignment:
Q  207 ataaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||||| ||||||    |||||||||||| |||||||||||  |||||||||||||||||||||||    
T  40831272 ataaaagaagggaaatgctaaccagtgccc----ggcactggttaaagatatgaaaaagaaaattatatagtagttaatgcat 40831350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 16888728 - 16888657
Alignment:
Q  217 ggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||  | ||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  16888728 ggaaatgctaaccggtgcccccg-ggcacaggttaaggatatgaaaaaggaaattatatagtagttaatgcat 16888657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 4537932 - 4537857
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||||   | |||||||||||||||||| ||| | ||||||||||||||||||||||||    
T  4537932 aagggaaatgctaaccggtgcctccggggcactggttaaggatataaaataggaaattatatagtagttaatgcat 4537857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 9063239 - 9063165
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||| ||  |  ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9063239 aagggaaatgctaaccggtgtcc-cggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 9063165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 16394247 - 16394174
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||  | |||||||||||||||| |||||||  |||||||||| ||||||||||||    
T  16394247 gggaaatgctaaccggtgcccccggggcactggttaaggatgtgaaaaagaaaattatataatagttaatgcat 16394174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 37373206 - 37373278
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||  | | |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  37373206 gggaaatgctaaccggtgcccccg-gacactggttaaggatatgaaaaaggaaattatataatagttaatgcat 37373278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 9254062 - 9254014
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9254062 ggcactggttaaggatatgaaaaatgaaattttatagtagttaatgcat 9254014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 16785085 - 16785156
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    ||||||||||||||||||||| |  | |||||||||||||||||||||||| |||||||||||| ||||||||    
T  16785085 aagggaaatgctaaccggtgctccag-ggcactggttaaggatatgaaaaaagaaattatatagcagttaatg 16785156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 21595848 - 21595919
Alignment:
Q  217 ggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||  | |||||||||||||| ||||||||| |||||||||||| |||||||||||    
T  21595848 ggaaatgctaaccggtgcccccg-ggcactggttaagggtatgaaaaaggaaattatataggagttaatgcat 21595919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 4648193 - 4648263
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    |||||||||||||||||||| ||  | ||||||| |||||||||||||||| ||||||||||||||||||||    
T  4648193 aagggaaatgctaaccggtgtcccgg-ggcactgattaaggatatgaaaaaggaaattatatagtagttaat 4648263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 238 - 289
Target Start/End: Complemental strand, 9537988 - 9537937
Alignment:
Q  238 tgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  9537988 tgtggtactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 9537937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 10618016 - 10618090
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgca 288  Q
    |||| |||||||||||||||||  |  ||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  10618016 aaggaaaatgctaaccggtgcctctagggcacaggttaaggatatgaaaaagaaaattatatagtagttaatgca 10618090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 11112666 - 11112712
Alignment:
Q  243 cactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  11112666 cactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 11112712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 12203854 - 12203927
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||||  | || || |||||||| ||||||||| ||||||||||||||||||||||||    
T  12203854 agggaaatgctaaccggtgcccccg-ggtaccggttaagggtatgaaaaaagaaattatatagtagttaatgcat 12203927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 12448282 - 12448355
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||||  | || || |||||||| ||||||||| ||||||||||||||||||||||||    
T  12448282 agggaaatgctaaccggtgcccccg-ggtaccggttaagggtatgaaaaaagaaattatatagtagttaatgcat 12448355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 2805446 - 2805373
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||| ||||| ||||||  | | |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  2805446 gggaaatgttaaccagtgcccccgggacactggttaaggatatgaaaaaggaaattatataatagttaatgcat 2805373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 42035141 - 42035097
Alignment:
Q  242 gcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  42035141 gcactggttaaggatatgaaaaaggaaattatatagtagttaatg 42035097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 29444328 - 29444253
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||| ||||| |||||||||| |  | ||||||| |||||||||||||||| ||||||||||||||||||| ||||    
T  29444328 aaggaaaatgttaaccggtgctcccggggcactgattaaggatatgaaaaaggaaattatatagtagttaacgcat 29444253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 32113938 - 32113981
Alignment:
Q  246 tggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  32113938 tggttaaggatatgaaaaaggaaattatatagtagttaatgcat 32113981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 36730471 - 36730517
Alignment:
Q  243 cactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  36730471 cactagttaaggatatgaaaaaggaaattatatagtagttaatgcat 36730517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 16890634 - 16890593
Alignment:
Q  248 gttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  16890634 gttaaggatatgaaaaaggaaattatatagtagttaatgcat 16890593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 281
Target Start/End: Original strand, 35695547 - 35695611
Alignment:
Q  217 ggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagt 281  Q
    |||||||||||||| || | | | ||||||| |||||||||| ||||||||||||||||||||||    
T  35695547 ggaaatgctaaccgatgtcataggggcactgattaaggatataaaaaatgaaattatatagtagt 35695611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 9278210 - 9278285
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||| ||||||   | | |||| ||||| ||||||||||| ||||||||||| ||||||||||||    
T  9278210 aagggaaatgctaactggtgcctcagggacactcgttaaagatatgaaaaaggaaattatataatagttaatgcat 9278285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 3930419 - 3930346
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||| ||||||||  | |||||| |||||  |||||||| | ||||||||||||||||||||||||    
T  3930419 agggaaatgctaatcggtgcccccg-ggcactagttaataatatgaaagaggaaattatatagtagttaatgcat 3930346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 7304703 - 7304631
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||| ||||||||| || || | ||||   |||||||||||||||  |||||||||||||||||||||||    
T  7304703 aagggaaatgttaaccggtgtccctgagacact---taaggatatgaaaaagaaaattatatagtagttaatgcat 7304631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 241 - 286
Target Start/End: Original strand, 28626793 - 28626838
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    ||||| |||||||||| ||||||| |||||||||||||||||||||    
T  28626793 ggcaccggttaaggatgtgaaaaaggaaattatatagtagttaatg 28626838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 29235235 - 29235308
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||  |  |  ||| || |||||||||| ||||| ||||||||||||||||||||||||    
T  29235235 gggaaatgctaaccggtgttcccggagcattgattaaggatataaaaaaagaaattatatagtagttaatgcat 29235308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 36923849 - 36923782
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagtta 283  Q
    ||||||| ||||||| ||||   | ||||||| |||||||||||||||| ||||||||||| ||||||    
T  36923849 gggaaatactaaccgctgcctccgaggcactgattaaggatatgaaaaaggaaattatataatagtta 36923782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 39751658 - 39751584
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatg-aaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||  | |||||||||||||||||  ||||| | |||||||||| || ||| |||||    
T  39751658 gggaaatgctaaccggtgcccccggggcactggttaaggataataaaaaggaaaattatatattatttattgcat 39751584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 10069969 - 10070042
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||  | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10069969 gggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 10070042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 13661806 - 13661881
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||  |  ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13661806 aagggaaatgctaaccggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 13661881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 13470144 - 13470224
Alignment:
Q  209 aaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||| ||||||||||||||||||||||  || |||||||||||||||||||||||| ||||| |||||||||| |||||||    
T  13470144 aaaaaaagggaaatgctaaccggtgcctatggggcactggttaaggatatgaaaaaggaaataatatagtagtcaatgcat 13470224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 8787337 - 8787412
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||| ||  | |||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  8787337 aagggaaatgctaaccggtgtccccggggcattggttaagggtatgaaaaatgaaattatatagtagttaatgcat 8787412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 35132520 - 35132591
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    |||||||||||||||||||||||  | | |||||||||||||||||||||| ||||||||||||||||||||    
T  35132520 aagggaaatgctaaccggtgcccccgggacactggttaaggatatgaaaaaggaaattatatagtagttaat 35132591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 34651018 - 34650946
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||  | |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  34651018 gggaaatgctaaccggtgcccccg-ggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 34650946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 35504426 - 35504353
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||  | | |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  35504426 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 35504353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 10054540 - 10054465
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||  | |||||||||||||| ||||||||| ||||||||||| || |||||||||    
T  10054540 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatataataattaatgcat 10054465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 11958153 - 11958081
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgca 288  Q
    |||||||||||||||||||||  | ||||| |||||| ||||| ||||| |||||||||||||||||||||||    
T  11958153 gggaaatgctaaccggtgcccccggggcacaggttaaagatataaaaaaggaaattatatagtagttaatgca 11958081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 19647819 - 19647771
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19647819 ggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 19647771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 12506296 - 12506369
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||  ||  ||||| ||||||  ||||||||| ||||||||||||||||||||||||    
T  12506296 gggaaatgctaaccggtgcctctggagcactcgttaagagtatgaaaaaggaaattatatagtagttaatgcat 12506369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 4837256 - 4837330
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||| ||||||||||||  | ||||| ||||||| |||||||||| |||||||||||||| |||||||||    
T  4837256 aagggaaatgttaaccggtgccccgg-ggcaccggttaagaatatgaaaaaggaaattatatagtaattaatgcat 4837330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 9721793 - 9721720
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||| ||||||||| ||| | |  |||||||||| |||||||||| |||||||||||||| |||||||||    
T  9721793 gggaaatgttaaccggtgtcctcgggctactggttaagaatatgaaaaaggaaattatatagtaattaatgcat 9721720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 21547579 - 21547507
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||| ||  | ||||  |||||||||||| ||||| ||||||||||||||||||||||||    
T  21547579 gggaaatgctaaccggtgtccccg-ggcatcggttaaggatataaaaaaggaaattatatagtagttaatgcat 21547507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 39069379 - 39069453
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||      |||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  39069379 aagggaaatgctaaccggtgcttccagggcactggttaagggtatgaaaag-gaaattatatagtagttaatgcat 39069453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 6283562 - 6283635
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||   | |||||| ||||| |||||||||||  |||||||||| || |||||||||    
T  6283562 gggaaatgctaaccggtgcctccggggcactagttaaagatatgaaaaagaaaattatataataattaatgcat 6283635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 31909659 - 31909704
Alignment:
Q  244 actggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||||    
T  31909659 actggttaaggatattaaaagggaaattatatagtagttaatgcat 31909704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 20175228 - 20175300
Alignment:
Q  217 ggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||| |   | | ||||||||||  |||| ||||| ||||||||||||||||||||||||    
T  20175228 ggaaatgctaaccggtgtctccgagacactggttaaaaatataaaaaaagaaattatatagtagttaatgcat 20175300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 40057340 - 40057380
Alignment:
Q  249 ttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  40057340 ttaaggatatgaaaaaggaaattatatagtagttagtgcat 40057380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 40564557 - 40564517
Alignment:
Q  249 ttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||| ||||||| ||||||||||||||||||||||||    
T  40564557 ttaaggatttgaaaaaggaaattatatagtagttaatgcat 40564517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 19436995 - 19436949
Alignment:
Q  243 cactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||| ||||||||||||||||| ||||||||||||| ||||| ||||    
T  19436995 cactcgttaaggatatgaaaaaggaaattatatagtggttaaagcat 19436949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 276
Target Start/End: Complemental strand, 39067095 - 39067062
Alignment:
Q  243 cactggttaaggatatgaaaaatgaaattatata 276  Q
    |||||||||||||||||||||| |||||||||||    
T  39067095 cactggttaaggatatgaaaaaagaaattatata 39067062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 21945049 - 21944973
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatg-aaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||||   | |||||||||||||||||  ||||| | |||||||||| || ||| |||||    
T  21945049 aagggaaatgctaaccggtgcctccggggcactggttaaggataataaaaaggaaaattatatattaattattgcat 21944973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 6295 - 6223
Alignment:
Q  217 ggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||| || |||||||||||||||||||||||| |||| |||||||||||||||||||    
T  6295 ggaaatgctaaccggtgcccctggggcactggttaaggatatgaaaaaggaaactatatagtagttaatgcat 6223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 20897946 - 20898021
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20897946 aagggaaatgctaaccggtgcccccagggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 20898021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 27433491 - 27433565
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||||  | |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  27433491 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 27433565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 392096 - 392169
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||  | |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  392096 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 392169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 2580952 - 2581025
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||| || ||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  2580952 gggaaatgctaaccggtgcccttgaggtactggttaatgatataaaaaaggaaattatatagtagttaatgcat 2581025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 3515764 - 3515839
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||    |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  3515764 aagggaaatgctaaccggtgcccccagggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 3515839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 18276802 - 18276728
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||| |||| ||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18276802 aagggaaatgttaactggtgcccctg-ggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 18276728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 23402130 - 23402211
Alignment:
Q  208 taaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||| ||||||||||||||| ||||||   | |||||||||||||||||||||||| |||||||||||||| |||||||||    
T  23402130 taaaataagggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcat 23402211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 1391370 - 1391291
Alignment:
Q  209 aaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||||| |  | || |||| |||||||||||||||| ||||||||||||||||||||||||    
T  1391370 aaaagaagggaaatgctaaccggtgctccgg-ggtactgattaaggatatgaaaaaggaaattatatagtagttaatgcat 1391291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 2350654 - 2350722
Alignment:
Q  218 gaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    ||||||||||||||||| |  | |||||||||||||||||||||||| |||||||||||||||||||||    
T  2350654 gaaatgctaaccggtgctcccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatg 2350722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 7851347 - 7851272
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||    ||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  7851347 aagggaaatgctaaccggtgcccccagggcactggttaaggatatgaaaaagaaaattatatagtaattaatgcat 7851272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 9660988 - 9661059
Alignment:
Q  218 gaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||| |||||||  ||||||||||||||||| ||||||| ||| ||||||||||||    
T  9660988 gaaatgctaaccggtgccctcgtggcaccagttaaggatatgaaaaaagaaattacataatagttaatgcat 9661059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 34396715 - 34396640
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||    | ||| |||||||||||||||||| ||||||||||||||||||||||||    
T  34396715 aagggaaatgctaaccggtgcccccaggacacaggttaaggatatgaaaaaggaaattatatagtagttaatgcat 34396640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 13529454 - 13529528
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||  ||||| | | |||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  13529454 agggaaatgctaacttgtgccttcggggcactggttaaggatgtgaaaaaggaaattatatagtagttaatgcat 13529528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 12145303 - 12145230
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||     ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  12145303 gggaaatgctaaccggtgcccccagtgcacttgttaaggatatgaaaaaggaaattatatagtagttaatgcat 12145230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 21878533 - 21878460
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||     ||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  21878533 gggaaatgctaaccggtgcctcccgggcacgggttaaggatatgaaaaaggaaattatatagtagttaatgcat 21878460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 3026195 - 3026122
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||| |||||||  |  ||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  3026195 aagggaaatgctaactggtgccccgg--gcactggttaagggtatgaaaaatgaaattatacagtagttaatgcat 3026122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 34477711 - 34477663
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34477711 ggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 34477663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 4215693 - 4215768
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||| ||||||||||||  | |||||||||||||  ||||||||| ||||||||||| ||||||||||||    
T  4215693 aagggaaatgttaaccggtgcccccggggcactggttaagagtatgaaaaaggaaattatataatagttaatgcat 4215768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 12525717 - 12525788
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    ||||||||||||||||||||||   | || ||||||||||| ||||||||| ||||||||||||||||||||    
T  12525717 aagggaaatgctaaccggtgcctccggggtactggttaagggtatgaaaaaggaaattatatagtagttaat 12525788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 32929696 - 32929621
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||  | |||| ||||||||| ||||||||| ||||||||||| || |||||||||    
T  32929696 aagggaaatgctaaccggtgcccccggggcaatggttaagggtatgaaaaaggaaattatatattaattaatgcat 32929621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 32985376 - 32985309
Alignment:
Q  219 aaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||||| |||||||||||| | |||| ||||||||||||| ||||| |||||||||||||||||||||    
T  32985376 aaatgcaaaccggtgccctcggggcattggttaaggatataaaaaaggaaattatatagtagttaatg 32985309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 29451301 - 29451228
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||| ||||||   | ||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  29451301 agggaaatgctaactggtgcctccg-ggcaccggttaaggatatgaaaaaggaaattatatagtagttaatgcat 29451228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 35043890 - 35043959
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    ||||||||||||| |||| ||  | | |||||||||||||||||||||| ||||||||||||||||||||    
T  35043890 gggaaatgctaactggtgtccacgggacactggttaaggatatgaaaaaagaaattatatagtagttaat 35043959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 26467285 - 26467237
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  26467285 ggcaccggttaaggatatgaaaaaggaaattatatagtagttaatgcat 26467237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 31280320 - 31280394
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||| |  | ||||||| |||||   |||||||| ||||||||||||||||||||||||    
T  31280320 agggaaatgctaaccggtgctcccgaggcactgattaagagaatgaaaaaggaaattatatagtagttaatgcat 31280394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 14559920 - 14559993
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgc 287  Q
    |||||||||||||||||||||| | | || |||| |||| ||||||||||| |||| |||||| ||||||||||    
T  14559920 aagggaaatgctaaccggtgccttcggggaactgattaaagatatgaaaaaagaaaatatataatagttaatgc 14559993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 34852030 - 34851962
Alignment:
Q  220 aatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||| | || | ||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  34852030 aatgctaaccggtgctcctgggacactg-ttaaagatatgaaaaaggaaattatatagtagttaatgcat 34851962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 285
Target Start/End: Complemental strand, 25165569 - 25165530
Alignment:
Q  246 tggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  25165569 tggttaaggatatgaaaaaagaaattatatagtagttaat 25165530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 286
Target Start/End: Complemental strand, 13417148 - 13417078
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||||||| |||||| | ||||   |||||| ||||||||||||||||| ||||||||||| |||||||||    
T  13417148 gggaaatgttaaccgataccctcagggcactagttaaggatatgaaaaaggaaattatatattagttaatg 13417078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 286
Target Start/End: Complemental strand, 23629761 - 23629692
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||||||| |||||| |||||  | ||||||| ||||||||||||||||  ||||||||||||||||||||    
T  23629761 gggaaatgttaaccgatgccccgg-ggcactgattaaggatatgaaaaagaaaattatatagtagttaatg 23629692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 286
Target Start/End: Original strand, 29978233 - 29978302
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    ||||||||||||||||||||   | | |||| ||||||||||||||||| |||||||||||||| ||||||    
T  29978233 gggaaatgctaaccggtgcctccg-gacactagttaaggatatgaaaaaggaaattatatagtatttaatg 29978302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 285
Target Start/End: Complemental strand, 11115256 - 11115212
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||||    
T  11115256 ggcactggttaaggatataaaaaaggaaattatataatagttaat 11115212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 3246270 - 3246200
Alignment:
Q  219 aaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||| |||||||||||||||  |||||| |||||||||  ||||| ||||||||| |||| ||| |||||    
T  3246270 aaatgttaaccggtgcccttggagcactgattaaggatactaaaaaggaaattatacagtaattattgcat 3246200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 1840407 - 1840363
Alignment:
Q  242 gcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    ||||||||||||||||| ||||| ||||||||||| || ||||||    
T  1840407 gcactggttaaggatataaaaaaagaaattatataataattaatg 1840363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 53872 - 53798
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||||  | |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  53872 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 53798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 207 - 289
Target Start/End: Complemental strand, 789725 - 789643
Alignment:
Q  207 ataaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||| |||||||||||||||||||||||  | ||||| |||||||| ||||||||| ||||||||||||||||||||||||    
T  789725 ataaaaaaagggaaatgctaaccggtgcccccggggcacgggttaagggtatgaaaaaggaaattatatagtagttaatgcat 789643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 18068066 - 18067992
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||||  | |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  18068066 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 18067992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 54897308 - 54897381
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||  | |||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  54897308 gggaaatgctaaccggtgcccccggggcactggttaaggatatgagaaaggaaattatatagtagttaatgcat 54897381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 206 - 289
Target Start/End: Complemental strand, 4269018 - 4268935
Alignment:
Q  206 tataaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||  ||||||||||||||||||||||  | |||||||||||||| ||||||||| |||| |||||||||||||||||||    
T  4269018 tataaaaatagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaactatatagtagttaatgcat 4268935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 12356242 - 12356313
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    ||||||||||||||||||||||| || |  ||||||||||||||||||||| ||||||||||||||||||||    
T  12356242 aagggaaatgctaaccggtgcccctgagatactggttaaggatatgaaaaaggaaattatatagtagttaat 12356313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 15186241 - 15186312
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    |||||||||||||||||||||||  | |||||||||||||| ||||||||| ||||||||||||||||||||    
T  15186241 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaat 15186312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 43944505 - 43944580
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||||   | |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  43944505 aagggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 43944580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 4089141 - 4089215
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||| || ||||||| |||||| |||||||||  |||||||||||||||||||||||    
T  4089141 agggaaatgctaaccggtgcccctggggcactgattaagggtatgaaaaagaaaattatatagtagttaatgcat 4089215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 28755621 - 28755693
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||| ||  | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28755621 gggaaatgctaaccggtgtcccag-ggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 28755693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 32217045 - 32217118
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||| |||||||  | |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  32217045 gggaaatgctaactggtgcccccggggcactggttaaggatataaaaaaggaaattatatagtagttaatgcat 32217118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 54054548 - 54054621
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||  | ||||| |||||||||||||||||| ||||||||||| ||||||||||||    
T  54054548 gggaaatgctaaccggtgccccgggggcaccggttaaggatatgaaaaaagaaattatataatagttaatgcat 54054621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 16536046 - 16536121
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||  | ||||| | |||||| ||||||||| ||||||||||||||||||||||||    
T  16536046 aagggaaatgctaaccggtgcccccggggcacggattaagggtatgaaaaaggaaattatatagtagttaatgcat 16536121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 29591187 - 29591262
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||| |||||||  | ||||||||||||| ||||||| || ||||||||||||||||||||||||    
T  29591187 aagggaaatgctaactggtgcccccggggcactggttaagaatatgaataaggaaattatatagtagttaatgcat 29591262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 43202571 - 43202496
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||  | |||||| ||||||| ||||||||| |||||||||||||| |||||||||    
T  43202571 aagggaaatgctaaccggtgcccccggggcactagttaagggtatgaaaaaggaaattatatagtaattaatgcat 43202496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 47232060 - 47231985
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||  |  ||||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  47232060 aagggaaatgctaaccggtgcccccggagcactggttaaggatgtgaaaaaggaaattatataatagttaatgcat 47231985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 216 - 286
Target Start/End: Complemental strand, 24679827 - 24679758
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||||||||||||||||| | | | |||||||||||||||||||||||| |||||||||||||||||||||    
T  24679827 gggaaatgctaaccggtgtc-tcggggcactggttaaggatatgaaaaaagaaattatatagtagttaatg 24679758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 3783687 - 3783614
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||   | ||||| ||||||  |||||||||||||||||||||||||||||||||||    
T  3783687 gggaaatgctaaccggtgcctccggggcaccggttaaacatatgaaaaatgaaattatatagtagttaatgcat 3783614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 7768936 - 7769008
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||||||||||||| |||| |||  | |||||||||||||| ||||||||| |||||||||||||||||||||    
T  7768936 aagggaaatgctaatcggtacccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatg 7769008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 6164092 - 6164166
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||| |||||||||| |||| ||||||||||||||||||  ||||  |||||||||||||||||||||||    
T  6164092 aagggaaatgataaccggtgctcttggggcactggttaaggatat-caaaagaaaattatatagtagttaatgcat 6164166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 39843937 - 39843980
Alignment:
Q  246 tggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  39843937 tggttaaggatatgaaaaatgaaattatatagtagttaatgcat 39843980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 32202666 - 32202593
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||| ||||||||| ||  | ||||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  32202666 gggaaatgttaaccggtgtccccggggcacgggttaaggatataaaaaaggaaattatatagtagttaatgcat 32202593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 42898907 - 42898859
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  42898907 ggcactggttaaggatataaaaaaggaaattatatagtagttaatgcat 42898859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 33108860 - 33108786
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||| |||||||||||   | ||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  33108860 aagggaaatgttaaccggtgcctccggggcactggttaag-atatgaaaaaggaaattatataatagttaatgcat 33108786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 1432705 - 1432659
Alignment:
Q  239 gtggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  1432705 gtggcactggttaaggatatgaaaaaggaaattatataatagttaat 1432659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 216 - 286
Target Start/End: Original strand, 4220195 - 4220265
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||||||| |||||| |||| | | || || |||||||||||||||||| |||||||||||||||||||||    
T  4220195 gggaaatgataaccgatgccttcggggtacgggttaaggatatgaaaaaggaaattatatagtagttaatg 4220265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 52533973 - 52533899
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgca 288  Q
    |||||||||| |||||||||||     | ||||||||||| |||||||||| |||||||||||||||||||||||    
T  52533973 aagggaaatgttaaccggtgcctccaggacactggttaagaatatgaaaaaggaaattatatagtagttaatgca 52533899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 286
Target Start/End: Complemental strand, 54656037 - 54655992
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||    
T  54656037 ggcactggttaaggatataaaaaaggaaattatatagtagttaatg 54655992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 286
Target Start/End: Complemental strand, 54945939 - 54945894
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||    
T  54945939 ggcactggttaaggatatgaaaaaggaaattatatagcagttaatg 54945894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 285
Target Start/End: Complemental strand, 19503289 - 19503222
Alignment:
Q  217 ggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    |||||||||||||||||| |  | || ||||||||||||||||||||| ||||||||||| ||||||||    
T  19503289 ggaaatgctaaccggtgctcccg-ggtactggttaaggatatgaaaaaggaaattatatactagttaat 19503222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 46688398 - 46688318
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaat-----gaaattatatagtagttaatgcat 289  Q
    ||||||||||||||| |||||||  | |||||||||||||||||||||||||      |||||||| ||||||||||||||    
T  46688398 aagggaaatgctaactggtgcccccgaggcactggttaaggatatgaaaaattaaagaaaattatacagtagttaatgcat 46688318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 50167590 - 50167662
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||  || | |||||||||||| |||||||||||  ||||  |||||||||||||||||    
T  50167590 agggaaatgctaaccggtgttctcggggcactggttaaagatatgaaaaagaaaat--tatagtagttaatgcat 50167662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 289
Target Start/End: Original strand, 50619089 - 50619159
Alignment:
Q  219 aaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||| ||||| |  | ||||||| ||||| ||||||||||  |||||||||||||||||||||||    
T  50619089 aaatgctaactggtgctcccggggcactgattaagaatatgaaaaagaaaattatatagtagttaatgcat 50619159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 55882683 - 55882756
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||| |   | |||||| |||||||||||||||||  ||||||||||||| |||||||||    
T  55882683 agggaaatgctaaccggtgtctccggggcactcgttaaggatatgaaaaa-aaaattatatagtaattaatgcat 55882756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 37987965 - 37988005
Alignment:
Q  246 tggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    ||||||||| ||||||||| |||||||||||||||||||||    
T  37987965 tggttaagggtatgaaaaaggaaattatatagtagttaatg 37988005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 5091798 - 5091727
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    ||||||||| ||||||||| | |  | ||||||||||||| ||||||||||| |||||||||| || |||||    
T  5091798 aagggaaatactaaccggtactcccggggcactggttaagaatatgaaaaataaaattatataataattaat 5091727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 36395129 - 36395172
Alignment:
Q  246 tggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||  |||||||||| ||||||||||||||||||||||||    
T  36395129 tggttaaaaatatgaaaaaggaaattatatagtagttaatgcat 36395172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 42815113 - 42815179
Alignment:
Q  219 aaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||||||||||||||| || | |  ||||||||||||||||||||| ||||||||||  |||||||||    
T  42815113 aaatgctaaccggtgctctggagt-actggttaaggatatgaaaaaggaaattatatcatagttaatg 42815179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 49915158 - 49915229
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||||||||| |||||| |||| ||  |||||| ||||||||||||||||  || |||||||||| ||||||    
T  49915158 agggaaatgcaaaccggcgcccctggtgcactgattaaggatatgaaaaagaaatttatatagtaattaatg 49915229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 243 - 286
Target Start/End: Complemental strand, 53656037 - 53655994
Alignment:
Q  243 cactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||| ||||||||||||||||| ||||||||||| |||||||||    
T  53656037 cacttgttaaggatatgaaaaaagaaattatataatagttaatg 53655994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 52697083 - 52697121
Alignment:
Q  247 ggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  52697083 ggttaaggatatgaaaaacaaaattatatagtagttaat 52697121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 286
Target Start/End: Complemental strand, 30154323 - 30154279
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||||| |||||| |||||||||| |||||||||||||||||||||    
T  30154323 ggcactagttaag-atatgaaaaaggaaattatatagtagttaatg 30154279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 49942659 - 49942711
Alignment:
Q  51 gagattaatcactcttaaacggtgatggatacttcataccaatatcatggtaa 103  Q
    ||||||||||| | |||| ||||| |||| |||||||| ||||||||||||||    
T  49942659 gagattaatcattgttaaccggtggtggaaacttcatatcaatatcatggtaa 49942711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 29657770 - 29657844
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||||  | |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  29657770 agggaaatgctaaccggtgcccccggggcactggttaaggatataaaaaaggaaattatatagtagttaatgcat 29657844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 17333467 - 17333395
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||  | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17333467 gggaaatgctaaccggtgcccccg-ggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 17333395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 15227737 - 15227812
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||| |||  | |||||||||||||||||||||||| |||||||||||||| |||||||||    
T  15227737 aagggaaatgctaaccggtaccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcat 15227812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 42770178 - 42770103
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||  | |||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  42770178 aagggaaatgctaaccggtgcccccggggcactggttaatggtatgaaaaaggaaattatatagtagttaatgcat 42770103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 29210412 - 29210486
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||   | |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  29210412 agggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 29210486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 24178649 - 24178576
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||| |||||  | |||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  24178649 gggaaatgctaaccgatgcccccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcat 24178576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 18043155 - 18043235
Alignment:
Q  209 aaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||| ||||||||||||||||||||||   | |||||||||||||| ||| ||||| ||||||||||||||||||||||||    
T  18043155 aaaaaaagggaaatgctaaccggtgcctccggggcactggttaagggtataaaaaaggaaattatatagtagttaatgcat 18043235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 9266916 - 9266841
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||| ||||||||| ||  | |||||||||||||||||||||||| |||||||||||||| |||||||||    
T  9266916 aagggaaatgttaaccggtgtccccgcggcactggttaaggatatgaaaaaggaaattatatagtatttaatgcat 9266841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 12072250 - 12072175
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||| ||||||||||||||||||  | ||||| |||||||||||||||||| |||||||| |||||||||||||||    
T  12072250 aaggaaaatgctaaccggtgcccccggggcaccggttaaggatatgaaaaaggaaattatgtagtagttaatgcat 12072175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 30657606 - 30657681
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||| |  | |||||| |||||| |||||||||| ||||||||||||||||||||||||    
T  30657606 aagggaaatgctaaccggtgctcccggggcactagttaagcatatgaaaaaagaaattatatagtagttaatgcat 30657681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 5694321 - 5694394
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||   | |||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  5694321 gggaaatgctaaccggtgcctccggggcactggttaaggatataaaaagggaaattatatagtagttaatgcat 5694394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 19011180 - 19011109
Alignment:
Q  217 ggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||| ||  | ||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  19011180 ggaaatgctaaccggtgtcccgg-ggcacgggttaaggatatgaaaaaggaaattatatagtagttaatgcat 19011109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 29683193 - 29683269
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatat-gaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||  | |||||||||||| |||||  ||||| ||||||||||||||||||||||||    
T  29683193 aagggaaatgctaaccggtgcccccggggcactggttaaagatataaaaaaaggaaattatatagtagttaatgcat 29683269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 38335163 - 38335242
Alignment:
Q  209 aaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||| |||||||||||||||||| | ||| | |||||||||| ||||||||||| |||||||||||||| |||||||||    
T  38335163 aaaagatgggaaatgctaaccggtgtc-ttgggacactggttaaagatatgaaaaaggaaattatatagtaattaatgcat 38335242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 286
Target Start/End: Complemental strand, 51065936 - 51065864
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||||||||||||||||||| ||  | | ||||||||||||||||||||||  ||||||||||||||||||||    
T  51065936 aagggaaatgctaaccggtgtccccgggacactggttaaggatatgaaaaagtaaattatatagtagttaatg 51065864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 3784873 - 3784826
Alignment:
Q  242 gcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3784873 gcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 3784826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 14350465 - 14350390
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||  |  |||| |||||||| ||||||||| |||||||||| |||||||||||||    
T  14350465 aagggaaatgctaaccggtgcccccggagcaccggttaagggtatgaaaaaggaaattatattgtagttaatgcat 14350390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 38702117 - 38702046
Alignment:
Q  218 gaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||| |  | |||||||||||||| ||||||||| |||| |||||||||||||||||||    
T  38702117 gaaatgctaaccggtgctcccggggcactggttaagggtatgaaaaaggaaactatatagtagttaatgcat 38702046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 13961211 - 13961284
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||||||  | ||||| |||||||||||| |||||  |||||||||||||||||||||||    
T  13961211 agggaaatgctaaccggtgcccccggggcacgggttaaggatat-aaaaaaaaaattatatagtagttaatgcat 13961284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 286
Target Start/End: Original strand, 43286714 - 43286792
Alignment:
Q  208 taaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    ||||| |||| |||||||||||| || || || | |||||||||||||||||||||| ||||||||||| |||||||||    
T  43286714 taaaacaaggaaaatgctaaccgatgtccctgggacactggttaaggatatgaaaaaggaaattatataatagttaatg 43286792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 19032002 - 19031933
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaa 284  Q
    |||||||||||||||||||| |  | |||| | ||||||||||||||||| |||||||||||||||||||    
T  19032002 agggaaatgctaaccggtgctccgggggcattagttaaggatatgaaaaaggaaattatatagtagttaa 19031933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 30294567 - 30294494
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||| ||||| ||  |  ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  30294567 gggaaatgctaatcggtgtccccggagcattggttaaggatatgaaaaaggaaattatatagtagttaatgcat 30294494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 38162850 - 38162923
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||| |||||||||||   | |||||||||||||| |||||||||  |||||||||||||||||||||||    
T  38162850 gggaaatgttaaccggtgcctccggggcactggttaagggtatgaaaaagaaaattatatagtagttaatgcat 38162923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 3097688 - 3097732
Alignment:
Q  245 ctggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  3097688 ctggttaaggatatgaaaaaggaaattatatagtagttaatgcat 3097732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 10976087 - 10976015
Alignment:
Q  217 ggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||| |||||| |  || |||||| ||||||||||||||||| || |||||||||||||||||||||    
T  10976087 ggaaatgctagccggtgtctctgaggcacttgttaaggatatgaaaaaggagattatatagtagttaatgcat 10976015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 47010019 - 47010063
Alignment:
Q  242 gcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  47010019 gcactggttaaggatatgaaaaaggaaattatatagtagttaatg 47010063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 26228219 - 26228266
Alignment:
Q  242 gcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||    
T  26228219 gcactggttaaggagataaaaaatgaaattatatagtagttaatgcat 26228266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 45431278 - 45431348
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    ||||||||||||||||||||||    ||| ||| |||||||||||||||| |||||||||||||||||||||    
T  45431278 agggaaatgctaaccggtgcccccagggc-ctgattaaggatatgaaaaaggaaattatatagtagttaatg 45431348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 51368973 - 51368898
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||||| ||     || ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  51368973 aagggaaatgctaaccggtacctccagggtactggttaagggtatgaaaaaggaaattatatagtagttaatgcat 51368898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 6770335 - 6770407
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||||||  |||||||||||||   | ||||||  |||||||||||||||| |||||||||||||||||||||    
T  6770335 aagggaatggctaaccggtgcctccggggcactaattaaggatatgaaaaaggaaattatatagtagttaatg 6770407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 286
Target Start/End: Complemental strand, 23473648 - 23473580
Alignment:
Q  218 gaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    ||||||||||| | ||||| || |||| ||||||||||||||||||| || ||||||||| ||||||||    
T  23473648 gaaatgctaactgatgcccctggggcattggttaaggatatgaaaaaggagattatatagcagttaatg 23473580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 28481844 - 28481907
Alignment:
Q  216 gggaaatgctaaccggtgcc-cttgtggcactggttaaggatatgaaaaatgaaattatatagta 279  Q
    |||||||||||||||||||| |||| ||| |||||||||||||||||||| ||||||||| ||||    
T  28481844 gggaaatgctaaccggtgcctcttg-ggccctggttaaggatatgaaaaaggaaattatacagta 28481907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 35985813 - 35985734
Alignment:
Q  209 aaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||| |||||||||| ||||||||||||  |   ||||| |||||||||| ||||| ||||||||||||||||||||||||    
T  35985813 aaaataagggaaatgttaaccggtgccccggat-cactgtttaaggatataaaaaaggaaattatatagtagttaatgcat 35985734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 52749596 - 52749672
Alignment:
Q  210 aaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    ||||||||||||||||||||| |  ||  | |||| ||||||| ||||||||||| ||||||||||| |||||||||    
T  52749596 aaagaagggaaatgctaaccgatatccgcggggcattggttaaagatatgaaaaaggaaattatataatagttaatg 52749672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 36446508 - 36446438
Alignment:
Q  218 gaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||| |||| |||||||  | ||||||||||||| |||| ||||| ||||||||||||||||||||||||    
T  36446508 gaaatgttaactggtgcccccgaggcactggttaagaatat-aaaaaggaaattatatagtagttaatgcat 36446438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 39912467 - 39912392
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||| ||||||| || || | ||||||| |||||||||| ||||  ||||||||||| ||||||||||||    
T  39912467 aagggaaatgttaaccggcgcactcggggcactgattaaggatataaaaagggaaattatatactagttaatgcat 39912392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 281
Target Start/End: Original strand, 41730303 - 41730370
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagt 281  Q
    |||||||||  ||||||||||||  | ||||| ||||||| |||||||||| ||||||||||||||||    
T  41730303 aagggaaatcttaaccggtgccccaggggcacgggttaagaatatgaaaaaagaaattatatagtagt 41730370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 275
Target Start/End: Complemental strand, 28726094 - 28726032
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggat-atgaaaaatgaaattatat 275  Q
    |||||||||||||||||||||||  | |||||||||||||||| || ||||| ||||||||||    
T  28726094 aagggaaatgctaaccggtgcccccggggcactggttaaggataataaaaaaggaaattatat 28726032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 48071482 - 48071555
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||| ||| |  | || |||||||||||||||| |||| ||||||||||| ||||||||||||    
T  48071482 agggaaatgctaaccgatgctccgg-ggtactggttaaggatatgtaaaaggaaattatataatagttaatgcat 48071555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 15282672 - 15282631
Alignment:
Q  244 actggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  15282672 actggttaaggatatgaaaaagaaaattatatagtagttaat 15282631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 47532824 - 47532783
Alignment:
Q  248 gttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  47532824 gttaaggatatgaaaaagaaaattatatagtagttaatgcat 47532783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 39497340 - 39497380
Alignment:
Q  249 ttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  39497340 ttaaggatatgaaaaagaaaattatatagtagttaatgcat 39497380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 8473070 - 8473027
Alignment:
Q  246 tggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||||    
T  8473070 tggttaaggatataaaaaaggaaattatataatagttaatgcat 8473027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 14881149 - 14881086
Alignment:
Q  219 aaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagtt 282  Q
    ||||| |||| |||||||  |||  ||||||||||||||||||||| ||||||||||| |||||    
T  14881149 aaatgttaactggtgcccccgtgatactggttaaggatatgaaaaaggaaattatataatagtt 14881086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 38595939 - 38595898
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggata 257  Q
    |||||||||||||||||||||  | |||||||||||||||||    
T  38595939 gggaaatgctaaccggtgcccccggggcactggttaaggata 38595898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 286
Target Start/End: Original strand, 39081826 - 39081871
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    ||||||||||||| |||  ||||||||||||||||| |||||||||    
T  39081826 ggcactggttaagcatactaaaaatgaaattatatactagttaatg 39081871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 48383294 - 48383238
Alignment:
Q  219 aaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatat 275  Q
    |||||||||||||||| |  | |||||||||||||||| |||||||  |||||||||    
T  48383294 aaatgctaaccggtgctcccggggcactggttaaggatgtgaaaaagaaaattatat 48383238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 50128325 - 50128285
Alignment:
Q  249 ttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||||||||||||  |||||| ||||||||||||||||    
T  50128325 ttaaggatatgaaaaagaaaattacatagtagttaatgcat 50128285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 22954 - 23030
Alignment:
Q  209 aaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    |||| |||||||||||||||||||||||  |  ||||||||||||||||||||||| |||||||||||||| |||||    
T  22954 aaaacaagggaaatgctaaccggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtaattaat 23030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 116202 - 116277
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||| ||||||||||||||||||  | ||||| |||||| ||||||||||| ||||||||||||||||||||||||    
T  116202 aaggaaaatgctaaccggtgcccccggggcacaggttaaagatatgaaaaaggaaattatatagtagttaatgcat 116277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 8058 - 8010
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8058 ggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 8010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 289
Target Start/End: Original strand, 7313 - 7361
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7313 ggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcat 7361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 14896 - 14968
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgca 288  Q
    |||||||||||||||||| ||  | |||||||||||| ||||| ||||| |||||||||||||||||||||||    
T  14896 gggaaatgctaaccggtgtccccggggcactggttaaagatataaaaaaagaaattatatagtagttaatgca 14968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 147093 - 147022
Alignment:
Q  214 aagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    ||||||||||||||||||||| | || ||  || ||||||||||||||||| ||||||||||||||||||||    
T  147093 aagggaaatgctaaccggtgctcctggggttctagttaaggatatgaaaaaggaaattatatagtagttaat 147022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 286
Target Start/End: Original strand, 50548 - 50618
Alignment:
Q  216 gggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||||||| |||||||||||   | |||||||||||| ||||||||||| |||||||||||||||||||||    
T  50548 gggaaatgttaaccggtgcctccggggcactggttaaagatatgaaaaaggaaattatatagtagttaatg 50618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 53505 - 53459
Alignment:
Q  243 cactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  53505 cactggttaaggatataaaaaaggaaattatatagtagttaatgcat 53459  T

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Target: scaffold0206 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 11155 - 11083
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||||||||| |||||||  |   |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  11155 agggaaatgctaactggtgccccgga--cactggttaaggatatgaaaaaggaaattatatattagttaatgcat 11083  T

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Target: scaffold1266 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 292 - 365
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    |||||||| |||||||||||||  | ||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  292 agggaaatcctaaccggtgccccag-ggcactggttaagcatatgaaaaagaaaattatataatagttaatgcat 365  T

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Target: scaffold0034 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 95777 - 95700
Alignment:
Q  209 aaaagaagggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaatg 286  Q
    |||| |||| ||||||||||||||||||  | || |||||||||| |||||||||| ||||||||||| || ||||||    
T  95777 aaaataaggaaaatgctaaccggtgcccccgaggtactggttaagaatatgaaaaaggaaattatataataattaatg 95700  T

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Target: scaffold0524 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 851 - 898
Alignment:
Q  242 gcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||||    
T  851 gcactagttaaggatatgaaaaagaaaattatatagtagttaatgcat 898  T

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Target: scaffold1152 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 677 - 747
Alignment:
Q  215 agggaaatgctaaccggtgcccttgtggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    ||||||||||||| ||||||||     |||| |||||| ||||||||||| ||||||||||||||||||||    
T  677 agggaaatgctaatcggtgcccccagagcacgggttaaagatatgaaaaaggaaattatatagtagttaat 747  T

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Target: scaffold0113 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 40952 - 40992
Alignment:
Q  249 ttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  40952 ttaagaatatgaaaaatgaaattatataatagttaatgcat 40992  T

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Target: scaffold0050 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 69251 - 69295
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaat 285  Q
    |||||| |||||||||||||||||  |||||||||||||||||||    
T  69251 ggcactcgttaaggatatgaaaaagtaaattatatagtagttaat 69295  T

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Target: scaffold0325 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 17631 - 17583
Alignment:
Q  241 ggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcat 289  Q
    ||||||| ||| ||||||||||||  |||||||||||||| ||||||||    
T  17631 ggcactgtttacggatatgaaaaagaaaattatatagtagctaatgcat 17583  T

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