View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2504_low_51 (Length: 276)

Name: NF2504_low_51
Description: NF2504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2504_low_51
NF2504_low_51
[»] chr7 (29 HSPs)
chr7 (15-260)||(24395113-24395357)
chr7 (15-135)||(3962120-3962240)
chr7 (15-135)||(45637853-45637973)
chr7 (34-134)||(34482999-34483099)
chr7 (38-135)||(35445562-35445659)
chr7 (15-135)||(42611952-42612073)
chr7 (15-135)||(48880730-48880851)
chr7 (16-135)||(4974538-4974658)
chr7 (38-135)||(15577650-15577747)
chr7 (20-135)||(30848715-30848831)
chr7 (38-135)||(15329439-15329536)
chr7 (38-135)||(35876409-35876506)
chr7 (15-135)||(25167659-25167774)
chr7 (42-134)||(29737313-29737406)
chr7 (21-134)||(20009902-20010016)
chr7 (15-134)||(42696224-42696345)
chr7 (15-135)||(37476883-37477004)
chr7 (15-135)||(18037119-18037239)
chr7 (53-135)||(15238564-15238646)
chr7 (67-131)||(15329285-15329350)
chr7 (67-131)||(48880915-48880980)
chr7 (15-131)||(36790283-36790390)
chr7 (67-131)||(4974723-4974788)
chr7 (67-131)||(42611823-42611888)
chr7 (67-131)||(45637724-45637789)
chr7 (70-131)||(15577841-15577903)
chr7 (67-131)||(3961991-3962056)
chr7 (67-112)||(15238414-15238459)
chr7 (67-131)||(34482847-34482912)
[»] chr5 (30 HSPs)
chr5 (15-135)||(8145515-8145635)
chr5 (15-135)||(14138809-14138929)
chr5 (15-135)||(33584132-33584253)
chr5 (15-135)||(3521810-3521930)
chr5 (15-135)||(6043315-6043435)
chr5 (15-135)||(4892343-4892464)
chr5 (15-135)||(25398379-25398500)
chr5 (15-135)||(37321596-37321717)
chr5 (15-135)||(3362919-3363041)
chr5 (15-135)||(12850942-12851064)
chr5 (15-135)||(2477777-2477898)
chr5 (15-135)||(38899528-38899650)
chr5 (15-122)||(11360947-11361055)
chr5 (15-135)||(22912860-22912978)
chr5 (38-135)||(12614540-12614638)
chr5 (18-101)||(4433845-4433928)
chr5 (22-106)||(13664708-13664792)
chr5 (53-135)||(17545485-17545567)
chr5 (15-126)||(27481963-27482077)
chr5 (15-112)||(31640767-31640864)
chr5 (67-131)||(12614721-12614786)
chr5 (67-131)||(8145387-8145452)
chr5 (67-131)||(22913042-22913107)
chr5 (38-103)||(36880148-36880218)
chr5 (72-131)||(10458409-10458469)
chr5 (67-131)||(2477648-2477713)
chr5 (67-131)||(6043499-6043564)
chr5 (67-131)||(11361119-11361184)
chr5 (67-112)||(17545673-17545718)
chr5 (67-112)||(31640928-31640973)
[»] chr3 (39 HSPs)
chr3 (15-135)||(19650703-19650823)
chr3 (15-131)||(30385542-30385658)
chr3 (15-135)||(22426148-22426268)
chr3 (11-135)||(37216856-37216981)
chr3 (18-135)||(34482691-34482809)
chr3 (15-135)||(3456205-3456326)
chr3 (15-135)||(3574329-3574450)
chr3 (15-135)||(33113934-33114056)
chr3 (15-135)||(8320385-8320507)
chr3 (15-135)||(3137217-3137338)
chr3 (15-135)||(37522194-37522315)
chr3 (16-135)||(33145854-33145974)
chr3 (32-135)||(3089578-3089681)
chr3 (15-135)||(48161046-48161168)
chr3 (38-135)||(6042042-6042139)
chr3 (38-135)||(2754884-2754981)
chr3 (18-135)||(36864835-36864952)
chr3 (16-134)||(26612891-26613008)
chr3 (38-131)||(33839700-33839794)
chr3 (34-135)||(40327992-40328094)
chr3 (38-134)||(47738276-47738373)
chr3 (15-152)||(9796815-9796953)
chr3 (53-135)||(8361842-8361924)
chr3 (23-135)||(42921274-42921388)
chr3 (15-134)||(24343688-24343811)
chr3 (15-135)||(41224374-41224496)
chr3 (27-103)||(42298017-42298092)
chr3 (40-134)||(46919061-46919156)
chr3 (15-128)||(41883031-41883147)
chr3 (15-80)||(11347409-11347476)
chr3 (67-131)||(6041896-6041961)
chr3 (67-131)||(2754729-2754794)
chr3 (67-131)||(9797017-9797082)
chr3 (67-131)||(47738117-47738182)
chr3 (67-131)||(3137402-3137467)
chr3 (67-131)||(3574515-3574580)
chr3 (67-112)||(8362033-8362078)
chr3 (15-71)||(42297495-42297549)
chr3 (67-131)||(33145725-33145789)
[»] chr4 (47 HSPs)
chr4 (16-135)||(21802123-21802242)
chr4 (15-135)||(22199401-22199521)
chr4 (15-135)||(36073491-36073611)
chr4 (15-135)||(46441985-46442106)
chr4 (17-134)||(2624980-2625098)
chr4 (18-135)||(44893016-44893134)
chr4 (18-135)||(44893570-44893688)
chr4 (15-135)||(9089011-9089132)
chr4 (15-135)||(24128380-24128501)
chr4 (15-135)||(47290207-47290328)
chr4 (15-135)||(53123172-53123293)
chr4 (15-134)||(7744916-7745036)
chr4 (15-134)||(50156383-50156502)
chr4 (15-134)||(49387691-49387812)
chr4 (15-135)||(10442590-10442713)
chr4 (15-135)||(4751587-4751709)
chr4 (15-135)||(31078622-31078743)
chr4 (38-135)||(33530487-33530584)
chr4 (38-135)||(36073116-36073213)
chr4 (16-133)||(23964269-23964388)
chr4 (28-135)||(17655586-17655693)
chr4 (15-112)||(30563350-30563448)
chr4 (18-134)||(37934745-37934862)
chr4 (27-134)||(42671822-42671930)
chr4 (46-135)||(11314054-11314144)
chr4 (38-134)||(37219796-37219893)
chr4 (11-134)||(44744571-44744690)
chr4 (53-135)||(24392854-24392936)
chr4 (145-196)||(3275204-3275255)
chr4 (145-193)||(3279783-3279831)
chr4 (145-193)||(28601497-28601545)
chr4 (67-130)||(36073731-36073795)
chr4 (77-135)||(25063377-25063436)
chr4 (145-192)||(28596919-28596966)
chr4 (67-131)||(33530676-33530741)
chr4 (67-131)||(10442777-10442842)
chr4 (67-131)||(31078807-31078872)
chr4 (51-123)||(36073276-36073349)
chr4 (67-131)||(49387876-49387941)
chr4 (67-131)||(2624849-2624914)
chr4 (67-131)||(7745100-7745165)
chr4 (67-131)||(21802310-21802375)
chr4 (67-131)||(22199273-22199338)
chr4 (67-131)||(24392679-24392744)
chr4 (67-131)||(36072959-36073024)
chr4 (67-131)||(46441856-46441921)
chr4 (67-131)||(47290078-47290143)
[»] scaffold0085 (2 HSPs)
scaffold0085 (15-135)||(47991-48111)
scaffold0085 (67-130)||(47863-47927)
[»] chr8 (49 HSPs)
chr8 (15-135)||(37985859-37985979)
chr8 (15-135)||(6108036-6108157)
chr8 (11-135)||(14128996-14129121)
chr8 (17-135)||(15187704-15187822)
chr8 (15-152)||(17841637-17841774)
chr8 (17-135)||(34665525-34665643)
chr8 (15-135)||(25581042-25581163)
chr8 (15-135)||(26041916-26042037)
chr8 (15-135)||(20091604-20091725)
chr8 (15-135)||(38017075-38017195)
chr8 (15-135)||(40779932-40780053)
chr8 (15-135)||(1645767-1645889)
chr8 (15-135)||(3596844-3596965)
chr8 (38-135)||(10044513-10044610)
chr8 (38-135)||(24211175-24211272)
chr8 (38-135)||(32064911-32065008)
chr8 (18-132)||(39772608-39772723)
chr8 (18-135)||(42754845-42754963)
chr8 (15-135)||(30055657-30055778)
chr8 (15-136)||(32393999-32394119)
chr8 (16-131)||(35353183-35353299)
chr8 (49-135)||(1503646-1503732)
chr8 (17-118)||(8453977-8454078)
chr8 (27-135)||(37132483-37132592)
chr8 (55-135)||(31347579-31347659)
chr8 (38-112)||(41819594-41819668)
chr8 (11-134)||(24844664-24844787)
chr8 (15-134)||(30834859-30834979)
chr8 (15-135)||(3890417-3890541)
chr8 (15-135)||(7022119-7022241)
chr8 (18-103)||(27835288-27835374)
chr8 (53-135)||(7017661-7017743)
chr8 (67-131)||(8453846-8453911)
chr8 (67-112)||(15972865-15972910)
chr8 (67-131)||(24844847-24844911)
chr8 (67-131)||(26042104-26042169)
chr8 (67-131)||(27782105-27782170)
chr8 (67-131)||(32064757-32064822)
chr8 (67-131)||(34665394-34665459)
chr8 (67-131)||(42755030-42755095)
chr8 (93-131)||(1886633-1886672)
chr8 (76-138)||(38016976-38017039)
chr8 (67-131)||(7021990-7022055)
chr8 (67-131)||(17841838-17841903)
chr8 (67-131)||(20091789-20091854)
chr8 (67-104)||(25581227-25581264)
chr8 (67-112)||(31347770-31347815)
chr8 (67-131)||(40780117-40780182)
chr8 (67-131)||(30835035-30835099)
[»] chr2 (32 HSPs)
chr2 (11-135)||(10662024-10662150)
chr2 (15-135)||(31174638-31174758)
chr2 (15-135)||(9293378-9293500)
chr2 (15-135)||(3989217-3989338)
chr2 (15-135)||(7475311-7475432)
chr2 (15-135)||(23267865-23267986)
chr2 (15-135)||(33380348-33380469)
chr2 (15-135)||(35160898-35161021)
chr2 (17-135)||(13354990-13355110)
chr2 (33-135)||(22592870-22592975)
chr2 (15-112)||(21936223-21936321)
chr2 (15-135)||(43331053-43331174)
chr2 (15-134)||(9723546-9723668)
chr2 (39-112)||(16767288-16767361)
chr2 (53-135)||(21393489-21393570)
chr2 (16-103)||(14941199-14941290)
chr2 (53-122)||(37335824-37335894)
chr2 (53-104)||(34320991-34321042)
chr2 (67-131)||(14941354-14941419)
chr2 (67-131)||(27847644-27847709)
chr2 (15-135)||(40262539-40262660)
chr2 (67-131)||(9293564-9293629)
chr2 (67-131)||(9723417-9723482)
chr2 (67-131)||(31174822-31174887)
chr2 (68-113)||(37335744-37335789)
chr2 (98-134)||(39819272-39819308)
chr2 (67-131)||(7475496-7475561)
chr2 (67-131)||(10661899-10661964)
chr2 (67-131)||(21936093-21936158)
chr2 (67-131)||(23268050-23268115)
chr2 (67-131)||(35160769-35160834)
chr2 (67-131)||(43330924-43330989)
[»] chr1 (31 HSPs)
chr1 (15-135)||(25973550-25973669)
chr1 (15-135)||(44094839-44094959)
chr1 (15-135)||(37821637-37821758)
chr1 (15-135)||(40215129-40215250)
chr1 (15-135)||(51737646-51737767)
chr1 (15-135)||(3559758-3559879)
chr1 (15-135)||(25463817-25463938)
chr1 (15-135)||(36966511-36966632)
chr1 (15-135)||(41876245-41876366)
chr1 (18-135)||(20304933-20305052)
chr1 (15-135)||(6883628-6883749)
chr1 (15-131)||(19015545-19015662)
chr1 (11-135)||(18404579-18404710)
chr1 (38-134)||(9910095-9910191)
chr1 (67-134)||(19722903-19722970)
chr1 (15-135)||(32000069-32000191)
chr1 (53-135)||(33786434-33786516)
chr1 (38-134)||(44690825-44690922)
chr1 (53-135)||(40273888-40273970)
chr1 (30-131)||(10167556-10167658)
chr1 (15-131)||(27523062-27523179)
chr1 (67-135)||(33786623-33786691)
chr1 (71-135)||(52064380-52064445)
chr1 (67-135)||(40273710-40273779)
chr1 (38-106)||(52329440-52329508)
chr1 (67-131)||(16045786-16045851)
chr1 (67-131)||(32000255-32000320)
chr1 (67-131)||(40215000-40215065)
chr1 (67-131)||(18404454-18404519)
chr1 (67-131)||(25463688-25463753)
chr1 (67-131)||(44094710-44094775)
[»] chr6 (29 HSPs)
chr6 (15-135)||(17175824-17175945)
chr6 (15-135)||(32702346-32702467)
chr6 (15-135)||(18365377-18365497)
chr6 (15-135)||(18370641-18370761)
chr6 (15-135)||(33696837-33696959)
chr6 (15-135)||(28675289-28675410)
chr6 (15-135)||(33695129-33695251)
chr6 (18-135)||(17705272-17705386)
chr6 (15-132)||(6031546-6031665)
chr6 (15-135)||(2309226-2309347)
chr6 (15-112)||(18889470-18889567)
chr6 (38-135)||(23290884-23290981)
chr6 (15-102)||(6127417-6127506)
chr6 (53-135)||(11548392-11548474)
chr6 (38-135)||(29693610-29693708)
chr6 (77-135)||(34238890-34238948)
chr6 (15-75)||(9752109-9752169)
chr6 (15-109)||(8515556-8515650)
chr6 (15-69)||(25987071-25987126)
chr6 (67-131)||(17176009-17176074)
chr6 (67-131)||(17705453-17705518)
chr6 (67-131)||(33695315-33695380)
chr6 (67-131)||(33696708-33696773)
chr6 (65-134)||(582531-582602)
chr6 (90-155)||(2120993-2121058)
chr6 (67-131)||(6127287-6127352)
chr6 (67-112)||(11548576-11548621)
chr6 (67-131)||(23291072-23291137)
chr6 (67-131)||(28675160-28675225)
[»] scaffold0096 (2 HSPs)
scaffold0096 (15-135)||(41152-41272)
scaffold0096 (67-131)||(41023-41088)
[»] scaffold0228 (6 HSPs)
scaffold0228 (18-135)||(26080-26198)
scaffold0228 (18-135)||(16128-16246)
scaffold0228 (18-76)||(8546-8605)
scaffold0228 (67-131)||(8414-8479)
scaffold0228 (67-131)||(15996-16061)
scaffold0228 (67-131)||(25948-26013)
[»] scaffold0471 (1 HSPs)
scaffold0471 (15-135)||(12983-13104)
[»] scaffold0178 (2 HSPs)
scaffold0178 (15-134)||(11762-11882)
scaffold0178 (67-131)||(11633-11698)
[»] scaffold0204 (1 HSPs)
scaffold0204 (15-135)||(4537-4658)
[»] scaffold0665 (1 HSPs)
scaffold0665 (11-62)||(3200-3252)
[»] scaffold0003 (1 HSPs)
scaffold0003 (154-192)||(297931-297970)


Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 15 - 260
Target Start/End: Original strand, 24395113 - 24395357
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  24395113 gggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttat 24395212  T
Q  115 aaaatcattcttgatatctagattttttccataaaaaatatatcaatcagagaaaaaatattcttctcaaatcaaactgatgacactttcaatgatagac 214  Q
    |||||||||||||||||||||  |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24395213 aaaatcattcttgatatctagcatttt-ccatgaaaaatatatcaatcagagaaaaaatattcttctcaaatcaaactgatgacactttcaatgatagac 24395311  T
Q  215 ttttagtcatcattgataacttcttcaactcaaatagatttgtttt 260  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||    
T  24395312 ttttagtcatcatcgataacttattcaactcaaatagatttgtttt 24395357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 3962120 - 3962240
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||    
T  3962120 gggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatatttcttat 3962219  T
Q  115 aaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||    
T  3962220 aaaatcattcttgatatctag 3962240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 45637853 - 45637973
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  45637853 gggtggtggatgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttat 45637952  T
Q  115 aaaatcattcttgatatctag 135  Q
    |||||||||||| ||||||||    
T  45637953 aaaatcattcttaatatctag 45637973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 34 - 134
Target Start/End: Original strand, 34482999 - 34483099
Alignment:
Q  34 tttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatct 133  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34482999 tttatttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatct 34483098  T
Q  134 a 134  Q
    |    
T  34483099 a 34483099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 35445562 - 35445659
Alignment:
Q  38 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  35445562 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttcttataaaatcattcttgatatctag 35445659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 42611952 - 42612073
Alignment:
Q  15 gggtggtgggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  42611952 gggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttctta 42612051  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  42612052 taaaatcattcttgatatctag 42612073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 48880851 - 48880730
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| || |||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||| |||||||    
T  48880851 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgaaactgaaatctaaatgtgattattgtgccatgtcattcttgaatttttctta 48880752  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  48880751 taaaatcattcttgatatctag 48880730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 4974658 - 4974538
Alignment:
Q  16 ggtggtgggtattatgtatttattttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    |||||||||| |||||||||| ||||| ||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  4974658 ggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcttttttat 4974559  T
Q  115 aaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||    
T  4974558 aaaatcattcttgatatctag 4974538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 15577747 - 15577650
Alignment:
Q  38 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  15577747 tttttataaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttggatctttcttataaaatcattcttgatatctag 15577650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 30848715 - 30848831
Alignment:
Q  20 gtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaa 118  Q
    |||||| |||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  30848715 gtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaa 30848814  T
Q  119 tcattcttgatatctag 135  Q
     ||||||||||||||||    
T  30848815 gcattcttgatatctag 30848831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 15329439 - 15329536
Alignment:
Q  38 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||    
T  15329439 tttttatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttcttataaaatcattctttatatctag 15329536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 35876409 - 35876506
Alignment:
Q  38 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  || |||||||||||||||||||||||||||||    
T  35876409 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttcttataaaatcattcttgatatctag 35876506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 25167774 - 25167659
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||| ||||| |||||||| || |||||||||||||||      |||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  25167774 gggtgatgggtgttatgtatcttttttttatgaaagatt------tgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 25167681  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  25167680 taaaatcattcttgatatctag 25167659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 42 - 134
Target Start/End: Original strand, 29737313 - 29737406
Alignment:
Q  42 tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 134  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||| ||||| |||||| |||||||||| ||||||||||||||||||||||    
T  29737313 tatgaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 20010016 - 20009902
Alignment:
Q  21 tgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaat 119  Q
    ||||| |||||||||| || |||| |||| ||||||||||||||| ||||||||   |||||||||||||||||||||||||||||||| || |||||||    
T  20010016 tgggtgttatgtattttttcttattaaaggttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaaat 20009917  T
Q  120 cattcttgatatcta 134  Q
    ||||| |||||||||    
T  20009916 cattcatgatatcta 20009902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 42696224 - 42696345
Alignment:
Q  15 gggtggtgggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt- 112  Q
    ||||||||| | |||||||||| |||| |||||||  |||||||||||||||||||||||| ||||||||||||  |||||||||||||||| ||| ||     
T  42696224 gggtggtggatgttatgtattttttttttatgaaaagttaataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaattttttttg 42696323  T
Q  113 ataaaatcattcttgatatcta 134  Q
    ||||||||||| ||||||||||    
T  42696324 ataaaatcattattgatatcta 42696345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 37477004 - 37476883
Alignment:
Q  15 gggtggtgggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||||| |||| | |  || || |||||||||||||||||||||| ||||||||||||| ||||||||| || ||||||||||     
T  37477004 gggtggtgggtgttatgtattttttttctgtataaaatgaataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttg 37476905  T
Q  114 taaaatcattcttgatatctag 135  Q
      ||||||||||||||||||||    
T  37476904 ataaatcattcttgatatctag 37476883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 18037119 - 18037239
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||||||| |||||||||| ||||| |   |||  |||||||| ||||||||||||| ||||||||||||  |||||||||||| ||||||||||      
T  18037119 gggtggtgggtgttatgtatttttttttttatgagaggaataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttga 18037218  T
Q  115 aaaatcattcttgatatctag 135  Q
     |||||||| |||||||||||    
T  18037219 taaatcattgttgatatctag 18037239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 135
Target Start/End: Original strand, 15238564 - 15238646
Alignment:
Q  53 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||| ||   ||||||||||||||||||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctag 15238646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 15329350 - 15329285
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  15329350 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 15329285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 48880915 - 48880980
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  48880915 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 48880980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 36790390 - 36790283
Alignment:
Q  15 gggtggtgggtattatgtatttat-ttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt- 112  Q
    ||||||||||| |||||||||| | ||||||||||| |||||||||||||| ||           ||||||||||||||||||||||||||||||| ||     
T  36790390 gggtggtgggtgttatgtatttttgttttatgaaaggttaataaatgagacaga-----------gattattgtgtcatgtcattcttgaatctttgttg 36790302  T
Q  113 ataaaatcattcttgatat 131  Q
    |||||| |||| |||||||    
T  36790301 ataaaaccattattgatat 36790283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 4974723 - 4974788
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 4974788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 42611888 - 42611823
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42611823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 45637789 - 45637724
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 45637724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 15577841 - 15577903
Alignment:
Q  70 tctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    ||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  15577841 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15577903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 3962056 - 3961991
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||| ||| |||||||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  3962056 aaatttaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 3961991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 15238459 - 15238414
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    |||||||| |||||||||| || |||||||||||||||| ||||||    
T  15238459 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 15238414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 34482912 - 34482847
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  34482912 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatat 34482847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 7e-55; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 8145515 - 8145635
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8145515 gggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttat 8145614  T
Q  115 aaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||    
T  8145615 aaaatcattcttgatatctag 8145635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 14138809 - 14138929
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14138809 gggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttat 14138908  T
Q  115 aaaatcattcttgatatctag 135  Q
    |||||||||||| ||||||||    
T  14138909 aaaatcattcttaatatctag 14138929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 33584253 - 33584132
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  33584253 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 33584154  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  33584153 taaaatcattcttgatatctag 33584132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 3521930 - 3521810
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||    
T  3521930 gggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttat 3521831  T
Q  115 aaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||    
T  3521830 aaaatcattcttgatatctag 3521810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 6043435 - 6043315
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||    
T  6043435 gggtgttgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttat 6043336  T
Q  115 aaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||    
T  6043335 aaaatcattcttgatatctag 6043315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 4892343 - 4892464
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  4892343 gggtggtgggtgttatgtatcttcttttaatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 4892442  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  4892443 taaaatcattcttgatatctag 4892464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 25398379 - 25398500
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||    
T  25398379 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattgttgaatttttctta 25398478  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  25398479 taaaatcattcttgatatctag 25398500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 37321717 - 37321596
Alignment:
Q  15 gggtggtgggtattatgtatttatt-tttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||    
T  37321717 gggtggtgggtgttatgtattttttatttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatttcattcttgaatatttctta 37321618  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  37321617 taaaatcattcttgatatctag 37321596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 3362919 - 3363041
Alignment:
Q  15 gggtggtgggtattatgtat--ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    ||||||||||| ||||||||  || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||    
T  3362919 gggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgtcatgtcattcttaaatttttctt 3363018  T
Q  113 ataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||||    
T  3363019 ataaaatcattcttgatatctag 3363041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 12850942 - 12851064
Alignment:
Q  15 gggtggtgggtattatgtattta--tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    ||||||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  12850942 gggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttctt 12851041  T
Q  113 ataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||||    
T  12851042 ataaaatcattcttgatatctag 12851064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 2477777 - 2477898
Alignment:
Q  15 gggtggtgggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||||| |||| |||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||  ||||||||||    
T  2477777 gggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgatcattgtgccatgtcattcttagatctttctta 2477876  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  2477877 taaaatcattcttgatatctag 2477898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 38899650 - 38899528
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaa-tctttctt 112  Q
    ||||||||||| |||| ||| || |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| | ||| ||    
T  38899650 gggtggtgggtgttatatatcttttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaattttttttt 38899551  T
Q  113 ataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||||    
T  38899550 ataaaatcattcttgatatctag 38899528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 15 - 122
Target Start/End: Complemental strand, 11361055 - 11360947
Alignment:
Q  15 gggtggtgggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||||| |||| |||||||||||||||||| ||| |||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  11361055 gggtggtgggtgttatgtattttttttgtatgaaagattaataaattagattgaaatctaaagatgattattgtgccatgtcattcttgaatctttctta 11360956  T
Q  114 taaaatcat 122  Q
    |||||||||    
T  11360955 taaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 22912978 - 22912860
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||||| | |||||||||| ||||||||| |||  |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||      
T  22912978 gggtggtggatgttatgtatttttttttatgagaga--aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttga 22912881  T
Q  115 aaaatcattcttgatatctag 135  Q
     ||||||||||||||||||||    
T  22912880 taaatcattcttgatatctag 22912860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 12614638 - 12614540
Alignment:
Q  38 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctag 135  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| || |||||||||| ||||||||||||    
T  12614638 tttttatgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctag 12614540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 4433928 - 4433845
Alignment:
Q  18 tggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattctt 101  Q
    |||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  4433928 tggtgggtgttatgtatttttttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattctt 4433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 13664708 - 13664792
Alignment:
Q  22 gggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatc 106  Q
    |||| |||||||||| ||||||| ||| |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||||    
T  13664708 gggtgttatgtatttttttttataaaacattaataaataagactgaaatctaagggtgattattctatcatgtcattcttgaatc 13664792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 17545567 - 17545485
Alignment:
Q  53 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||| ||   ||||||||||||||||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctag 17545485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 27481963 - 27482077
Alignment:
Q  15 gggtggtgggtattatgtatttattttt-atgaaagattaataaatgagactgaaa-tctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    ||||||||||| |||||||||| ||||| || |||| ||||||||| ||| | ||| |||||||||||||||| ||| ||||||||||||||||||| ||    
T  27481963 gggtggtgggtgttatgtattttttttttataaaaggttaataaataagattaaaaatctaaaggtgattattctgttatgtcattcttgaatctttttt 27482062  T
Q  113 -ataaaatcattctt 126  Q
     ||||||||||||||    
T  27482063 gataaaatcattctt 27482077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 31640864 - 31640767
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||| |||    |||||||||  ||||||| || |||||||||||||||||||||||    
T  31640864 gggtggtgggtgttatgtatttttttttatgaaaggttaataaataagatatcaatctaaagtcgattattctgccatgtcattcttgaatctttctt 31640767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 12614721 - 12614786
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| |||||||  ||||||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatat 12614786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 8145452 - 8145387
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8145387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 22913042 - 22913107
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| | |||||| ||||||||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatat 22913107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 36880218 - 36880148
Alignment:
Q  38 tttttatgaaagattaataaatgagactg-aaatctaaaggtgat----tattgtgtcatgtcattcttga 103  Q
    |||||||||||| |||||| ||||||||| |||||||| ||||||    ||||||||||||||||||||||    
T  36880218 tttttatgaaaggttaatagatgagactgaaaatctaagggtgattatatattgtgtcatgtcattcttga 36880148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 10458469 - 10458409
Alignment:
Q  72 taaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||||||||| || |||||||||||||||| |||||| |||||||  ||||||||||    
T  10458469 taaaggtgattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 2477713 - 2477648
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  2477713 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 2477648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 6043499 - 6043564
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| |  |||||||||||||||  |||||| |||||||| ||||||||||    
T  6043499 aaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatat 6043564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 11361119 - 11361184
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  11361119 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 11361184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 17545673 - 17545718
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    |||||||| |||||||||| || |||||||||||||||| ||||||    
T  17545673 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 17545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 31640928 - 31640973
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    |||||||| |||| ||||| || |||||||||||||||||||||||    
T  31640928 aaatctaagggtggttattctgccatgtcattcttgaatctttctt 31640973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 7e-55; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 19650823 - 19650703
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19650823 gggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttat 19650724  T
Q  115 aaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||    
T  19650723 aaaatcattcttgatatctag 19650703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 30385542 - 30385658
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30385542 gggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttat 30385641  T
Q  115 aaaatcattcttgatat 131  Q
    |||||||||||||||||    
T  30385642 aaaatcattcttgatat 30385658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 22426268 - 22426148
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  22426268 gggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttgaatctttcttat 22426169  T
Q  115 aaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||    
T  22426168 aaaatcattcttgatatctag 22426148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 37216981 - 37216856
Alignment:
Q  11 catagggtggtgggtattatgtatttattttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatcttt 109  Q
    ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  37216981 catagggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatcttt 37216882  T
Q  110 cttataaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||||||    
T  37216881 cttataaaatcattcttgatatctag 37216856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 34482809 - 34482691
Alignment:
Q  18 tggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataa 116  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  34482809 tggtgggtattatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataa 34482710  T
Q  117 aatcattcttgatatctag 135  Q
    |||||||||||||||||||    
T  34482709 aatcattcttgatatctag 34482691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 3456205 - 3456326
Alignment:
Q  15 gggtggtgggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  3456205 gggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaagatgattagtgtgtcatgtcattcttgaatctttctta 3456304  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  3456305 taaaatcattcttgatatctag 3456326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 3574450 - 3574329
Alignment:
Q  15 gggtggtgggtattatgtatttattttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  3574450 gggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctagaggtgattattgtgtcatgtcattcttggatctttctta 3574351  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  3574350 taaaatcattcttgatatctag 3574329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 33113934 - 33114056
Alignment:
Q  15 gggtggtgggtattatgtatttatttt--tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    ||||||||||| |||||||||| ||||  |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  33113934 gggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 33114033  T
Q  113 ataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||||    
T  33114034 ataaaatcattcttgatatctag 33114056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 8320507 - 8320385
Alignment:
Q  15 gggtggtgggtattatgtatttattttt--atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    |||| |||||| |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8320507 gggtagtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 8320408  T
Q  113 ataaaatcattcttgatatctag 135  Q
    ||||||||||| |||||||||||    
T  8320407 ataaaatcattattgatatctag 8320385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 3137338 - 3137217
Alignment:
Q  15 gggtggtgggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||| ||||| |||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  3137338 gggtgatgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 3137239  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  3137238 taaaatcattcttgatatctag 3137217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 37522194 - 37522315
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||| |||||||    
T  37522194 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattatgccatgtcattcttaaatttttctta 37522293  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  37522294 taaaatcattcttgatatctag 37522315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 33145854 - 33145974
Alignment:
Q  16 ggtggtgggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||||||  ||||||||| |||| |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33145854 ggtggtgggtggtatgtattttttttttatgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttat 33145953  T
Q  115 aaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||    
T  33145954 aaaatcattcttgatatctag 33145974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 3089578 - 3089681
Alignment:
Q  32 tatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatat 131  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||    
T  3089578 tatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatat 3089677  T
Q  132 ctag 135  Q
    ||||    
T  3089678 ctag 3089681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 48161046 - 48161168
Alignment:
Q  15 gggtggtgggtattatgtatttatttt--tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    ||||||||||| |||||||||| ||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  48161046 gggtggtgggtgttatgtatttttttttttatgaaaaattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttctt 48161145  T
Q  113 ataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||||    
T  48161146 ataaaatcattcttgatatctag 48161168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 6042042 - 6042139
Alignment:
Q  38 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  6042042 tttttatgaaaaattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctag 6042139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 2754884 - 2754981
Alignment:
Q  38 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||    
T  2754884 tttttatgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatgattcttgatatctag 2754981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 36864952 - 36864835
Alignment:
Q  18 tggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataa 116  Q
    |||||||| |||||||||| ||| |||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||    
T  36864952 tggtgggtgttatgtattt-tttatatgaaatgttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataa 36864854  T
Q  117 aatcattcttgatatctag 135  Q
    |||||||||||||||||||    
T  36864853 aatcattcttgatatctag 36864835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 26612891 - 26613008
Alignment:
Q  16 ggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-at 114  Q
    |||||||||| ||||||||||  ||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||| ||    
T  26612891 ggtggtgggtgttatgtattt--ttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaat 26612988  T
Q  115 aaaatcattcttgatatcta 134  Q
    ||||||||| ||||||||||    
T  26612989 aaaatcattattgatatcta 26613008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 33839700 - 33839794
Alignment:
Q  38 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33839700 tttttatgaaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 40327992 - 40328094
Alignment:
Q  34 tttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatc 132  Q
    ||||||||||| |||| | ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40327992 tttatttttatcaaaggtaaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatc 40328091  T
Q  133 tag 135  Q
    |||    
T  40328092 tag 40328094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 38 - 134
Target Start/End: Original strand, 47738276 - 47738373
Alignment:
Q  38 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 134  Q
    |||||||||||| |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  47738276 tttttatgaaaggttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatcta 47738373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 152
Target Start/End: Complemental strand, 9796953 - 9796815
Alignment:
Q  15 gggtggtgggtattatgtatttat---ttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttct 111  Q
    ||||||||||| |||||||||| |   |||||||||||   ||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  9796953 gggtggtgggtcttatgtatttttcttttttatgaaagg--aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttct 9796856  T
Q  112 tataaaatcattcttgatatctagattttttccataaaaaa 152  Q
    |   ||||||||||||||||||||  |||| ||||||||||    
T  9796855 tgataaatcattcttgatatctagcattttcccataaaaaa 9796815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 8361924 - 8361842
Alignment:
Q  53 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctag 8361842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 42921274 - 42921388
Alignment:
Q  23 ggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatc 120  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||||| ||| ||||||| ||||| |||||||||||| ||| |||||| ||||||||    
T  42921274 ggtattatgtattttttttttatgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatc 42921373  T
Q  121 attcttgatatctag 135  Q
    |||||| ||||||||    
T  42921374 attcttaatatctag 42921388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 24343688 - 24343811
Alignment:
Q  15 gggtggtgggtattatgtatttatttttat---gaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttct 111  Q
    ||||||||||| |||||||||| ||||| |   ||||| ||||||||| |||||||||||||| |||||||||  | ||||||||||||||||||||| |    
T  24343688 gggtggtgggtgttatgtattttttttttttttgaaaggttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttt 24343787  T
Q  112 t-ataaaatcattcttgatatcta 134  Q
    | ||||||||||||||||||||||    
T  24343788 tgataaaatcattcttgatatcta 24343811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 41224374 - 41224496
Alignment:
Q  15 gggtggtgggtattatgtatttattttt----atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttc 110  Q
    ||||||||||| |||||||||| |||||    ||||||||  ||||||||||| |||||| ||| ||||||||||||| |||||||||||||||| ||||    
T  41224374 gggtggtgggtgttatgtatttttttttttttatgaaaga--aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttc 41224471  T
Q  111 ttataaaatcattcttgatatctag 135  Q
    ||   ||||||||||||||||||||    
T  41224472 ttgataaatcattcttgatatctag 41224496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 42298017 - 42298092
Alignment:
Q  27 ttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttga 103  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  42298017 ttatgtattt-tttttatgaaaggttaataaatgagactgaaatctaagggtggttattgtgtcatgtcattcttga 42298092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 46919061 - 46919156
Alignment:
Q  40 tttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 134  Q
    ||||||| |||||||||||| |||| |||||||| ||||||||||| || ||||||||| |||||||||| || ||||||||||||||||||||||    
T  46919061 tttatgatagattaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatcta 46919156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 41883147 - 41883031
Alignment:
Q  15 gggtggtgggtattatgtatttattttt--atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    ||||||||||| |||||||||| |||||  || |||| || |||||| ||||||||||| |||| |||||||| |  |||||||||||||||||||||||    
T  41883147 gggtggtgggtgttatgtatttttttttttataaaaggttgataaataagactgaaatccaaagatgattattttaccatgtcattcttgaatctttctt 41883048  T
Q  113 -ataaaatcattcttga 128  Q
     ||||||||||| ||||    
T  41883047 cataaaatcatttttga 41883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 11347409 - 11347476
Alignment:
Q  15 gggtggtgggtattatgtatttatttt--tatgaaagattaataaatgagactgaaatctaaaggtga 80  Q
    ||||||||||| |||||||||| ||||  ||||||| |||||||||||||| ||||||||||||||||    
T  11347409 gggtggtgggtgttatgtatttttttttttatgaaaaattaataaatgagattgaaatctaaaggtga 11347476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 6041961 - 6041896
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  6041961 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 6041896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 2754794 - 2754729
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    ||||||||||||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  2754794 aaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 2754729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 9797017 - 9797082
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| | |||||| ||||||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 9797082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 47738182 - 47738117
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||||||| |||||| || ||| |||||||||||| |||||| |||||||| ||||||||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 3137402 - 3137467
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||||||||    
T  3137402 aaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 3137467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 3574515 - 3574580
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  3574515 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 3574580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 8362033 - 8362078
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    |||||||| |||||||||| || |||||||||||||||| ||||||    
T  8362033 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 8362078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 42297495 - 42297549
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatc 71  Q
    ||||||||| | ||||||||||  ||||||||||| ||||||||||||||| |||||    
T  42297495 gggtggtggatgttatgtattt--ttttatgaaaggttaataaatgagactaaaatc 42297549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 33145789 - 33145725
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||| ||  ||| | |||||||| ||||||||||    
T  33145789 aaatctaagggtgattattctgccatgtcattcttaaaattttttaataaaatctttcttgatat 33145725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 3e-54; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 21802242 - 21802123
Alignment:
Q  16 ggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttata 115  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21802242 ggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttata 21802143  T
Q  116 aaatcattcttgatatctag 135  Q
    ||||||||||||||||||||    
T  21802142 aaatcattcttgatatctag 21802123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 22199401 - 22199521
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  22199401 gggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttat 22199500  T
Q  115 aaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||    
T  22199501 aaaatcattcttgatatctag 22199521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 36073491 - 36073611
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  36073491 gggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttat 36073590  T
Q  115 aaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||    
T  36073591 aaaatcattcttgatatctag 36073611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 46441985 - 46442106
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  46441985 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 46442084  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  46442085 taaaatcattcttgatatctag 46442106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 2624980 - 2625098
Alignment:
Q  17 gtggtgggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttata 115  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  2624980 gtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcatttttgaatctttcttata 2625079  T
Q  116 aaatcattcttgatatcta 134  Q
    |||||||||||||||||||    
T  2625080 aaatcattcttgatatcta 2625098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 44893134 - 44893016
Alignment:
Q  18 tggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataa 116  Q
    |||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||    
T  44893134 tggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataa 44893035  T
Q  117 aatcattcttgatatctag 135  Q
    |||||||||||||||||||    
T  44893034 aatcattcttgatatctag 44893016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 44893570 - 44893688
Alignment:
Q  18 tggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataa 116  Q
    |||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||    
T  44893570 tggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataa 44893669  T
Q  117 aatcattcttgatatctag 135  Q
    |||||||||||||||||||    
T  44893670 aatcattcttgatatctag 44893688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 9089011 - 9089132
Alignment:
Q  15 gggtggtgggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| | |||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||    
T  9089011 gggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttctta 9089110  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  9089111 taaaatcattcttgatatctag 9089132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 24128380 - 24128501
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||| | |||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||    
T  24128380 gggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttctta 24128479  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  24128480 taaaatcattcttgatatctag 24128501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 47290207 - 47290328
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  47290207 gggtggtgggtgttatgtatcttttttttatgaaagaataataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatttttctta 47290306  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  47290307 taaaatcattcttgatatctag 47290328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 53123172 - 53123293
Alignment:
Q  15 gggtggtgggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| | |||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||    
T  53123172 gggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttctta 53123271  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  53123272 taaaatcattcttgatatctag 53123293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 7745036 - 7744916
Alignment:
Q  15 gggtggtgggtattatgtatttattttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||||| ||||| |||||| |||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  7745036 gggtggtgggtgttatgtattttttttttatgaaatattaataaatgagattgaaatctaaaggtgattattgtgcaatgtcattcttgaatctttctta 7744937  T
Q  114 taaaatcattcttgatatcta 134  Q
    |||||||||||||||||||||    
T  7744936 taaaatcattcttgatatcta 7744916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 50156502 - 50156383
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||    
T  50156502 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaa-ggtgattattatgtcatgtcattcttgaatttttctta 50156404  T
Q  114 taaaatcattcttgatatcta 134  Q
    |||||||||||||||||||||    
T  50156403 taaaatcattcttgatatcta 50156383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 49387812 - 49387691
Alignment:
Q  15 gggtggtgggtattatgtat--ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    ||||||||| | ||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  49387812 gggtggtggatgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 49387713  T
Q  113 ataaaatcattcttgatatcta 134  Q
    |||||||||| |||||||||||    
T  49387712 ataaaatcatccttgatatcta 49387691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 10442713 - 10442590
Alignment:
Q  15 gggtggtgggtattatgtatttatttttat--gaaagattaa-taaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttct 111  Q
    ||||||||||| |||||| ||| ||||| |  |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10442713 gggtggtgggtgttatgtttttttttttttttgaaagattaaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 10442614  T
Q  112 tataaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||||    
T  10442613 tataaaatcattcttgatatctag 10442590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 4751587 - 4751709
Alignment:
Q  15 gggtggtgggtattatgtattta--tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    ||||||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||| ||||||    
T  4751587 gggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttaaatttttctt 4751686  T
Q  113 ataaaatcattcttgatatctag 135  Q
    ||||||| |||||||||||||||    
T  4751687 ataaaattattcttgatatctag 4751709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 31078743 - 31078622
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||| ||||| |||||||| || |||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||| ||| |||    
T  31078743 gggtgatgggtgttatgtatcttttttttatgaaagattaataaatgagattgaaatctaaagatgattattgtgccatgtcattcttgaatttttttta 31078644  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  31078643 taaaatcattcttgatatctag 31078622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 33530584 - 33530487
Alignment:
Q  38 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||    
T  33530584 tttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttttttataaaatcattcttgatatctag 33530487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 36073116 - 36073213
Alignment:
Q  38 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| |||||||||||    
T  36073116 tttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcatttttgatatctag 36073213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 23964388 - 23964269
Alignment:
Q  16 ggtggtgggtattatgtatttattttt--atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    |||||||||| |||||||||| |||||  ||||||||||||||||||||| |||||||||||| |||||||| || |||||||||||| |||||||||||    
T  23964388 ggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaagatgattattatgccatgtcattcttaaatctttctta 23964289  T
Q  114 taaaatcattcttgatatct 133  Q
    ||||||||||||||||||||    
T  23964288 taaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 135
Target Start/End: Original strand, 17655586 - 17655693
Alignment:
Q  28 tatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattctt 126  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  17655586 tatgtattt-tttttatgaaaggttaataaatgagactgaaatctaaaggtaattattatgtcatgtcattcttaaatctttcttgataaaatcattctt 17655684  T
Q  127 gatatctag 135  Q
     ||||||||    
T  17655685 aatatctag 17655693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 30563350 - 30563448
Alignment:
Q  15 gggtggtgggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    ||||||||||| |||||||||| |||| |||||||| ||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  30563350 gggtggtgggtgttatgtattttttttttatgaaaggttaataaataagactgaaatctaagtgtgattattgtgtcatgtcattcttgaatctttctt 30563448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 37934862 - 37934745
Alignment:
Q  18 tggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataa 116  Q
    |||||| | |||||||||| |||||||||||| ||||||||||||| |||||||||| ||||||||||||||||| ||||| ||||||||||||| ||||    
T  37934862 tggtggttgttatgtatttttttttatgaaaggttaataaatgagattgaaatctaagggtgattattgtgtcatatcattattgaatctttcttaataa 37934763  T
Q  117 aatcattcttgatatcta 134  Q
    ||||| || | |||||||    
T  37934762 aatcagtcataatatcta 37934745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 42671822 - 42671930
Alignment:
Q  27 ttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattct 125  Q
    |||||| ||| |||||| ||||| |||| |||||||||| ||||||||   |||||||| |||||||||||||||||||||||||| |||||||||||||    
T  42671822 ttatgtttttttttttacgaaaggttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattct 42671921  T
Q  126 tgatatcta 134  Q
    |||||||||    
T  42671922 tgatatcta 42671930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 46 - 135
Target Start/End: Complemental strand, 11314144 - 11314054
Alignment:
Q  46 aaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctag 135  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  11314144 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctag 11314054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 134
Target Start/End: Original strand, 37219796 - 37219893
Alignment:
Q  38 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 134  Q
    |||||||||||| ||||||||| ||| |||||||||| | |||||||| || |||||||||||| |||||||||| ||||||||||||||||||||||    
T  37219796 tttttatgaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatcta 37219893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 134
Target Start/End: Original strand, 44744571 - 44744690
Alignment:
Q  11 catagggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttc 110  Q
    ||||||||||||||| |||||||||| ||||| | | || ||||||||| |||||||||||||| | | ||||||| ||||||||||||||||||||       
T  44744571 catagggtggtgggtgttatgtatttttttttgt-ataggttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaatct--- 44744666  T
Q  111 ttataaaatcattcttgatatcta 134  Q
    | ||||||||||| ||||||||||    
T  44744667 tgataaaatcatttttgatatcta 44744690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 53 - 135
Target Start/End: Original strand, 24392854 - 24392936
Alignment:
Q  53 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||| | |||||||||||  ||||||||||| ||| ||||||   ||||||||||||||||||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgataaatcattcttgatatctag 24392936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 3275255 - 3275204
Alignment:
Q  145 ataaaaaatatatcaatcagagaaaaaatattcttctcaaatcaaactgatg 196  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  3275255 ataaaacatatatcaatcagagaaaaaatattcttctgaaatcaaactgatg 3275204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 3279831 - 3279783
Alignment:
Q  145 ataaaaaatatatcaatcagagaaaaaatattcttctcaaatcaaactg 193  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||    
T  3279831 ataaaacatatatcaatcagagaaaaaatattcttctgaaatcaaactg 3279783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 28601497 - 28601545
Alignment:
Q  145 ataaaaaatatatcaatcagagaaaaaatattcttctcaaatcaaactg 193  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||    
T  28601497 ataaaacatatatcaatcagagaaaaaatattcttctgaaatcaaactg 28601545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 36073731 - 36073795
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgata 130  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||| |||||||| |||||||||    
T  36073731 aaatctaaaagtgattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 135
Target Start/End: Complemental strand, 25063436 - 25063377
Alignment:
Q  77 gtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctag 135  Q
    ||||||||| |  ||||||||||||||||||||||| |||||||||||||||||||||||    
T  25063436 gtgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctag 25063377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 28596919 - 28596966
Alignment:
Q  145 ataaaaaatatatcaatcagagaaaaaatattcttctcaaatcaaact 192  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  28596919 ataaaacatatatcaatcagagaaaaaatattcttctgaaatcaaact 28596966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 33530676 - 33530741
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| |||||||| ||||||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatat 33530741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 10442777 - 10442842
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 10442842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 31078807 - 31078872
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 31078872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 36073349 - 36073276
Alignment:
Q  51 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcatt 123  Q
    ||||||||| ||||||||||||||  || |||||| || ||| |||||||| |||||||||| |||||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatt 36073276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 49387876 - 49387941
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 49387941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 2624914 - 2624849
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || ||| |||||||||||  |||||| |||||||| ||||||||||    
T  2624914 aaatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatat 2624849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 7745100 - 7745165
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  7745100 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 7745165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 21802310 - 21802375
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||  ||||||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 21802375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 22199338 - 22199273
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| | |||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  22199338 aaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 22199273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 24392744 - 24392679
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||| ||| |||||||||| || |||||||||||||||| |||||| | |||||| ||||||||||    
T  24392744 aaatttaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 24392679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 36073024 - 36072959
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||| ||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  36073024 aaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 36072959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 46441921 - 46441856
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||||||||    
T  46441921 aaatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatat 46441856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 47290143 - 47290078
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 47290078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 47991 - 48111
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||    
T  47991 gggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaagatgattattgtgctatgtcattcttgaatctttcttat 48090  T
Q  115 aaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||    
T  48091 aaaatcattcttgatatctag 48111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 47927 - 47863
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgata 130  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgata 47863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 2e-52; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 37985979 - 37985859
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37985979 gggtggtgggtgttatgtatttttttttatgaaagattaataaatgggactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttat 37985880  T
Q  115 aaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||    
T  37985879 aaaatcattcttgatatctag 37985859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 6108157 - 6108036
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6108157 gggtggtgggtgttatgtatcttctttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttctta 6108058  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  6108057 taaaatcattcttgatatctag 6108036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 14128996 - 14129121
Alignment:
Q  11 catagggtggtgggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatcttt 109  Q
    ||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  14128996 catagggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatattt 14129095  T
Q  110 cttataaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||||||    
T  14129096 cttataaaatcattcttgatatctag 14129121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 15187704 - 15187822
Alignment:
Q  17 gtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataa 116  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||    
T  15187704 gtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataa 15187803  T
Q  117 aatcattcttgatatctag 135  Q
    |||||||||||||||||||    
T  15187804 aatcattcttgatatctag 15187822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 15 - 152
Target Start/End: Complemental strand, 17841774 - 17841637
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  17841774 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 17841675  T
Q  114 taaaatcattcttgatatctagattttttccataaaaaa 152  Q
    ||||||||||||||||||||||   ||||||||||||||    
T  17841674 taaaatcattcttgatatctag-cattttccataaaaaa 17841637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 34665525 - 34665643
Alignment:
Q  17 gtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataa 116  Q
    ||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  34665525 gtggtgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataa 34665624  T
Q  117 aatcattcttgatatctag 135  Q
    |||||||||||||||||||    
T  34665625 aatcattcttgatatctag 34665643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 25581163 - 25581042
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  25581163 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 25581064  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  25581063 taaaatcattcttgatatctag 25581042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 26042037 - 26041916
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  26042037 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 26041938  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  26041937 taaaatcattcttgatatctag 26041916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 20091725 - 20091604
Alignment:
Q  15 gggtggtgggtattatgtatttattttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||||| ||||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  20091725 gggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctta 20091626  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  20091625 taaaatcattcttgatatctag 20091604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 38017075 - 38017195
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtga-ttattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  38017075 gggtggtgggtgttatgtattttttttt-tgaaagattaataaatgagactgaaatctaaaggtaaattattgtgtcatgtcattcttgaatctttctta 38017173  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  38017174 taaaatcattcttgatatctag 38017195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 40780053 - 40779932
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||| | |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  40780053 gggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 40779954  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  40779953 taaaatcattcttgatatctag 40779932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 1645889 - 1645767
Alignment:
Q  15 gggtggtgggtattatgtatttattttt--atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    ||||||||||| |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||    
T  1645889 gggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggttctttctt 1645790  T
Q  113 ataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||||    
T  1645789 ataaaatcattcttgatatctag 1645767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 3596965 - 3596844
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||||    
T  3596965 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttctta 3596866  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  3596865 taaaatcattcttgatatctag 3596844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 10044513 - 10044610
Alignment:
Q  38 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10044513 tttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctag 10044610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 24211272 - 24211175
Alignment:
Q  38 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  24211272 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctag 24211175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 32064911 - 32065008
Alignment:
Q  38 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  32064911 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctag 32065008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 39772723 - 39772608
Alignment:
Q  18 tggtgggtattatgtatttattttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataa 116  Q
    |||||||| |||||||||| ||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39772723 tggtgggtgttatgtattttttttttatgaaagattaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataa 39772624  T
Q  117 aatcattcttgatatc 132  Q
    ||||||||||||||||    
T  39772623 aatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 42754963 - 42754845
Alignment:
Q  18 tggtgggtattatgtatttattttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataa 116  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||| ||||||||||    
T  42754963 tggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttaaatttttcttataa 42754864  T
Q  117 aatcattcttgatatctag 135  Q
    |||||||||||||||||||    
T  42754863 aatcattcttgatatctag 42754845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 30055657 - 30055778
Alignment:
Q  15 gggtggtgggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||| | |||||||||| |||| |||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  30055657 gggtggtggatgttatgtattttttttttatgaaaggttaataaatgagactaaaatctaagggtgattattgtgtcatgtcattcttgaatctttctta 30055756  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||| ||||||||    
T  30055757 taaaatcattcttaatatctag 30055778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 15 - 136
Target Start/End: Original strand, 32393999 - 32394119
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||| ||||    
T  32393999 gggtggtaggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtg-catgtcattcttaaatattttttat 32394097  T
Q  115 aaaatcattcttgatatctaga 136  Q
    ||||||||||||||||| ||||    
T  32394098 aaaatcattcttgatatataga 32394119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 35353183 - 35353299
Alignment:
Q  16 ggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    |||||||||| |||||||| || |||||||||||||||||||||||||| | |||| ||||||||||||||||| |||||||||||||||| ||||||||    
T  35353183 ggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagattaaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttat 35353282  T
Q  115 aaaatcattcttgatat 131  Q
    |||||||||||||||||    
T  35353283 aaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 49 - 135
Target Start/End: Complemental strand, 1503732 - 1503646
Alignment:
Q  49 gattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  1503732 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctag 1503646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 8453977 - 8454078
Alignment:
Q  17 gtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataa 116  Q
    ||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||    
T  8453977 gtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaattcttcttataa 8454076  T
Q  117 aa 118  Q
    ||    
T  8454077 aa 8454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 135
Target Start/End: Complemental strand, 37132592 - 37132483
Alignment:
Q  27 ttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattct 125  Q
    |||||| ||| ||||| |||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  37132592 ttatgtttttttttttttgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattct 37132493  T
Q  126 tgatatctag 135  Q
    ||||||||||    
T  37132492 tgatatctag 37132483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 135
Target Start/End: Complemental strand, 31347659 - 31347579
Alignment:
Q  55 taaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||   ||||||||||||||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctag 31347579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 41819668 - 41819594
Alignment:
Q  38 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41819668 tttttatgataggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 41819594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 24844787 - 24844664
Alignment:
Q  11 catagggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttc 110  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||||| | ||| | ||||||||  ||||||||| || |||| ||||||| ||||||||    
T  24844787 catagggtggtgggtgttatgtattt-tttttatgaaaggttaataattaagattaaaatctaagagtgattattttgccatgccattcttaaatctttc 24844689  T
Q  111 tt-ataaaatcattcttgatatcta 134  Q
    || ||||||||||| ||||||||||    
T  24844688 ttgataaaatcattattgatatcta 24844664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 30834979 - 30834859
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-a 113  Q
    ||||||||||| ||||||||||  |||||| |||  || | |||| | |||||||||||| |||| ||||| ||||||||||||||| |||||||||| |    
T  30834979 gggtggtgggtgttatgtattttattttatcaaaagttgaaaaataacactgaaatctaagggtggttattctgtcatgtcattctttaatctttcttga 30834880  T
Q  114 taaaatcattcttgatatcta 134  Q
    |||||||||||||||||||||    
T  30834879 taaaatcattcttgatatcta 30834859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 3890541 - 3890417
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaa----gattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttc 110  Q
    ||||||||||| |||||||||| ||||||| |||    | ||||||||| ||| | |||||||| |||||||||| || ||| |||||||||||||||||    
T  3890541 gggtggtgggtgttatgtattt-tttttataaaattaaggttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttc 3890443  T
Q  111 tt-ataaaatcattcttgatatctag 135  Q
    || |||||||||||||||||||||||    
T  3890442 ttgataaaatcattcttgatatctag 3890417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 7022119 - 7022241
Alignment:
Q  15 gggtggtgggtattatgtatttattttt----atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttc 110  Q
    ||||||||||| |||||||||| |||||    |||||||   |||||||||||||||||||||| || |||||||||| | |||||||||||||||||||    
T  7022119 gggtggtgggtgttatgtatttttttttttttatgaaagg--aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttc 7022216  T
Q  111 ttataaaatcattcttgatatctag 135  Q
    ||   |||||||| |||||||||||    
T  7022217 ttgataaatcattgttgatatctag 7022241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 27835374 - 27835288
Alignment:
Q  18 tggtgggtattatgtatttat-ttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttga 103  Q
    |||||||| |||||||||| | |||||| |||| ||||||||||||| |||||||||| | ||||||||||||||| ||||| ||||    
T  27835374 tggtgggtgttatgtatttttgttttataaaaggttaataaatgagattgaaatctaaggatgattattgtgtcatatcatttttga 27835288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 7017743 - 7017661
Alignment:
Q  53 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||| | |||||||| |   ||||||||||| ||| ||||||   ||||||||||||||||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgataaatcattcttgatatctag 7017661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 8453911 - 8453846
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| | |||||| ||||||||||    
T  8453911 aaatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatat 8453846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 15972865 - 15972910
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||||    
T  15972865 aaatctaagggtgattattctgtcatgtcattcttcaatctttctt 15972910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 24844847 - 24844911
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||| |||||||  ||||||||||    
T  24844847 aaatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatat 24844911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 26042104 - 26042169
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||| ||||    
T  26042104 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatat 26042169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 27782105 - 27782170
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || ||||||||| ||||||||||||| |||||||  ||||||||||    
T  27782105 aaatctaagggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatat 27782170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 32064822 - 32064757
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 32064757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 34665459 - 34665394
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 34665394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 42755030 - 42755095
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 131
Target Start/End: Original strand, 1886633 - 1886672
Alignment:
Q  93 gtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  1886633 gtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 38017039 - 38016976
Alignment:
Q  76 ggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagatt 138  Q
    |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  38017039 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagatt 38016976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 7022055 - 7021990
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || ||| |||||||||||| |||||| | |||||| ||||||||||    
T  7022055 aaatctaagggtgattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatat 7021990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 17841838 - 17841903
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 17841903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 20091789 - 20091854
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||  ||||||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 20091854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 25581227 - 25581264
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaa 104  Q
    ||||||||||||||||||| || |||||||||||||||    
T  25581227 aaatctaaaggtgattattttgccatgtcattcttgaa 25581264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 31347770 - 31347815
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    |||||||| |||||||||| || |||||||||||||||| ||||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 31347815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 40780117 - 40780182
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 40780182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 30835035 - 30835099
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatat 131  Q
    ||||| || |||||||||| || |||||||||||||||| |||   |||||||| ||||||||||    
T  30835035 aaatcaaagggtgattattctgccatgtcattcttgaattttttcgataaaatctttcttgatat 30835099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 7e-52; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 10662024 - 10662150
Alignment:
Q  11 catagggtggtgggtattatgtat--ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctt 108  Q
    ||||||||||||||| ||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  10662024 catagggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttt 10662123  T
Q  109 tcttataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||||||||    
T  10662124 tcttataaaatcattcttgatatctag 10662150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 31174758 - 31174638
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  31174758 gggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggagtttattgtgtcatgtcattcttgaatctttcttat 31174659  T
Q  115 aaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||    
T  31174658 aaaatcattcttgatatctag 31174638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 9293500 - 9293378
Alignment:
Q  15 gggtggtgggtattatgtatttattttt--atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    ||||||||||| |||||||||| |||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9293500 gggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 9293401  T
Q  113 ataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||||    
T  9293400 ataaaatcattcttgatatctag 9293378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 3989217 - 3989338
Alignment:
Q  15 gggtggtgggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  3989217 gggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggttattattgtgtcatgtcattcttggatctttctta 3989316  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  3989317 taaaatcattcttgatatctag 3989338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 7475432 - 7475311
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||    
T  7475432 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattatgtcatatcattcttgaatttttctta 7475333  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  7475332 taaaatcattcttgatatctag 7475311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 23267986 - 23267865
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||    
T  23267986 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctta 23267887  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  23267886 taaaatcattcttgatatctag 23267865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 33380348 - 33380469
Alignment:
Q  15 gggtggtgggtattatgtatttattttta-tgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  33380348 gggtggtgggtgttatgtatctttttttaatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 33380447  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  33380448 taaaatcattcttgatatctag 33380469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 35160898 - 35161021
Alignment:
Q  15 gggtggtgggtattatgtat---ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttct 111  Q
    ||||||||||| ||||||||   || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  35160898 gggtggtgggtgttatgtatcttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttct 35160997  T
Q  112 tataaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||||    
T  35160998 tataaaatcattcttgatatctag 35161021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 13354990 - 13355110
Alignment:
Q  17 gtggtgggtattatgtatttatttt--tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||||| |||||||||| ||||  |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||    
T  13354990 gtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttggatctttcttat 13355089  T
Q  115 aaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||    
T  13355090 aaaatcattcttgatatctag 13355110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 22592870 - 22592975
Alignment:
Q  33 atttatttttatgaaagattaataaatgagactgaaa--tctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgat 129  Q
    |||| |||||||||||| ||||||||| |||||||||  ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22592870 atttttttttatgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgat 22592969  T
Q  130 atctag 135  Q
    ||||||    
T  22592970 atctag 22592975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 21936223 - 21936321
Alignment:
Q  15 gggtggtgggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    ||||||||||| |||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  21936223 gggtggtgggtgttatgtattttttttttatgaaagattaataaatgaaactgaaatctaaaggtgattattgtgccatgtcattcttggatcattctt 21936321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 43331053 - 43331174
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaa-agattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||||| ||||| | |  |||  |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||     
T  43331053 gggtggtgggtgttatgtattttttttttttatgagaggaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttg 43331152  T
Q  114 taaaatcattcttgatatctag 135  Q
      ||||||||||||||||||||    
T  43331153 ataaatcattcttgatatctag 43331174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 9723546 - 9723668
Alignment:
Q  15 gggtggtgggtattatgtatttatttt--tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    ||||||||||| |||||||||| ||||  |||||||  | ||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  9723546 gggtggtgggtgttatgtatttttttttttatgaaaagtgaataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttctt 9723645  T
Q  113 -ataaaatcattcttgatatcta 134  Q
     || |||||||||||||||||||    
T  9723646 gatcaaatcattcttgatatcta 9723668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 16767361 - 16767288
Alignment:
Q  39 ttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  16767361 ttttatgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttctt 16767288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 21393570 - 21393489
Alignment:
Q  53 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaat-tttcttgataaatcattcttgatatctag 21393489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 14941290 - 14941199
Alignment:
Q  16 ggtggtgggtattatgtatttatttt----tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttga 103  Q
    |||||||||| |||||||||| ||||    |||||||| ||||||||| ||| |||||||||| | ||||||||||||||||||||||||||    
T  14941290 ggtggtgggtgttatgtattttttttattttatgaaaggttaataaataagattgaaatctaaggatgattattgtgtcatgtcattcttga 14941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  53 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcat 122  Q
    |||||||||||||||||||||| |||||||| |||||||||||||| || |||||||||| ||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 34321042 - 34320991
Alignment:
Q  53 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaa 104  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 34320991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 14941354 - 14941419
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || ||||||||||||||||||||||| |||||||| ||||||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatat 14941419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 27847709 - 27847644
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatat 27847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 40262660 - 40262539
Alignment:
Q  15 gggtggtgggtattatgtatttattttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||||||||||| ||||||  |||| |||| | ||||||||||||  || |||||| |  |||||||||||||||||  || |     
T  40262660 gggtggtgggtgttatgtatttattttttatgaaacgttaacaaataaaactgaaatctaagagttattattctaccatgtcattcttgaatccatcgtg 40262561  T
Q  114 taaaatcattcttgatatctag 135  Q
     |||  ||||||||||||||||    
T  40262560 aaaatccattcttgatatctag 40262539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 9293564 - 9293629
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatat 9293629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 9723482 - 9723417
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||| ||| |||||||||| ||||||||||||||| |||||||||| |||||||| ||||| ||||    
T  9723482 aaatttaagggtgattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatat 9723417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 31174822 - 31174887
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatat 31174887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 37335789 - 37335744
Alignment:
Q  68 aatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    |||||||| ||||||||| || ||||||||||||||||||||||||    
T  37335789 aatctaaaagtgattattctgccatgtcattcttgaatctttctta 37335744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 39819272 - 39819308
Alignment:
Q  98 tcttgaatctttcttataaaatcattcttgatatcta 134  Q
    |||||||| ||||||||||||||||||||||||||||    
T  39819272 tcttgaatttttcttataaaatcattcttgatatcta 39819308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 7475496 - 7475561
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| | ||||||||||||||||  |||||| | |||||| ||||||||||    
T  7475496 aaatctaagggtgattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatat 7475561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 10661964 - 10661899
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  10661964 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 10661899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 21936158 - 21936093
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || ||| |||||||||||  |||||| |||||||| ||||||||||    
T  21936158 aaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 21936093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 23268050 - 23268115
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 23268115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 35160834 - 35160769
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  35160834 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 35160769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 43330989 - 43330924
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||| ||| || | |||||| ||||||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatat 43330924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 4e-50; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 25973550 - 25973669
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  25973550 gggtggtgggtgttatgtattt-tttttatgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtcattcttgaatttttcttat 25973648  T
Q  115 aaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||    
T  25973649 aaaatcattcttgatatctag 25973669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 44094839 - 44094959
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  44094839 gggtggtgggtgttatgtatttttctttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttat 44094938  T
Q  115 aaaatcattcttgatatctag 135  Q
    ||||| |||||||||||||||    
T  44094939 aaaataattcttgatatctag 44094959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 37821758 - 37821637
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37821758 gggtgttgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttctta 37821659  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  37821658 taaaatcattcttgatatctag 37821637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 40215129 - 40215250
Alignment:
Q  15 gggtggtgggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40215129 gggtggtgggtgttatgtattttttttttatgaaatattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctta 40215228  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  40215229 taaaatcattcttgatatctag 40215250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 51737646 - 51737767
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  51737646 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 51737745  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  51737746 taaaatcattcttgatatctag 51737767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 3559758 - 3559879
Alignment:
Q  15 gggtggtgggtatta-tgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  3559758 gggtggtgggtgttaatgtatttttttttatgaaagattaataaatgagactgaaatataaaggtgattattgtgtcatatcattcttggatctttctta 3559857  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  3559858 taaaatcattcttgatatctag 3559879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 25463817 - 25463938
Alignment:
Q  15 gggtggtgggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||    
T  25463817 gggtggtgggtgttatgtattttttttttatgaaagattaataaatgagacttaaatctaaaggtgattattgtgccatgtcattcttggatctttctta 25463916  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  25463917 taaaatcattcttgatatctag 25463938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 36966632 - 36966511
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||    
T  36966632 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgttattcttgaatttttctta 36966533  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  36966532 taaaatcattcttgatatctag 36966511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 41876366 - 41876245
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||    
T  41876366 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttgaatttttctta 41876267  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  41876266 taaaatcattcttgatatctag 41876245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 20305052 - 20304933
Alignment:
Q  18 tggtgggtattatgtatttattttt--atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttata 115  Q
    |||||||| |||||||||| |||||  |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20305052 tggtgggtgttatgtatttttttttttatgaaagattgataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttata 20304953  T
Q  116 aaatcattcttgatatctag 135  Q
    ||||||||||||||||||||    
T  20304952 aaatcattcttgatatctag 20304933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 6883628 - 6883749
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||| |||||||    
T  6883628 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgaatattatgccatgtcattcttgaatttttctta 6883727  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  6883728 taaaatcattcttgatatctag 6883749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 19015545 - 19015662
Alignment:
Q  15 gggtggtgggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  19015545 gggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 19015644  T
Q  114 taaaatcattcttgatat 131  Q
    ||||||||||||||||||    
T  19015645 taaaatcattcttgatat 19015662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 18404579 - 18404710
Alignment:
Q  11 catagggtggtgggtattatgtatttatt-------tttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttga 103  Q
    ||||||||||||||| |||||||||| ||       |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |    
T  18404579 catagggtggtgggtgttatgtattttttattttattttatgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaa 18404678  T
Q  104 atctttcttataaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||||||||||||    
T  18404679 atctttcttataaaatcattcttgatatctag 18404710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 38 - 134
Target Start/End: Complemental strand, 9910191 - 9910095
Alignment:
Q  38 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatcta 134  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  9910191 tttttatgaaagattaataaataagtctgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatcta 9910095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 19722970 - 19722903
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatcta 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatcta 19722903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 32000191 - 32000069
Alignment:
Q  15 gggtggtgggtattatgtatttatt----tttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttc 110  Q
    ||||||||||| |||||||||| ||    |||||||||  | |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  32000191 gggtggtgggtgttatgtattttttattttttatgaaa--tgaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttc 32000094  T
Q  111 ttataaaatcattcttgatatctag 135  Q
    ||   ||||||||||||||||||||    
T  32000093 ttgataaatcattcttgatatctag 32000069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 33786516 - 33786434
Alignment:
Q  53 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||   ||||||||||||||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctag 33786434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 38 - 134
Target Start/End: Complemental strand, 44690922 - 44690825
Alignment:
Q  38 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 134  Q
    ||||||| |||||||||||||| |||||| ||||||| |||||||||| || ||||||||||||||||||||||| ||||||||||| ||||||||||    
T  44690922 tttttataaaagattaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatcta 44690825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 53 - 135
Target Start/End: Original strand, 40273888 - 40273970
Alignment:
Q  53 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||   ||||||||||||||||||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctag 40273970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 10167556 - 10167658
Alignment:
Q  30 tgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaat-ctttcttataaaatcattcttga 128  Q
    ||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||| |||| | |||||| |||  ||| |||||||||||||||| |    
T  10167556 tgtatttttttttatgaaaaattaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaa 10167655  T
Q  129 tat 131  Q
    |||    
T  10167656 tat 10167658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 27523179 - 27523062
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-a 113  Q
    ||||| ||||| |||||||||| |||||||||||  ||||||||| ||||| ||||| || |||||||| | || |||   ||||||||||||||||| |    
T  27523179 gggtgatgggtgttatgtatttttttttatgaaaagttaataaataagactaaaatcaaagggtgattaatctgccatacgattcttgaatctttcttga 27523080  T
Q  114 taaaatcattcttgatat 131  Q
    ||||||||||||||||||    
T  27523079 taaaatcattcttgatat 27523062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 33786623 - 33786691
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    |||| ||| ||||||||||||| |||||||||||||||||||||||   ||||||||||||||||||||    
T  33786623 aaatttaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctag 33786691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 52064445 - 52064380
Alignment:
Q  71 ctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctag 135  Q
    |||| ||||| |||| |||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctag 52064380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 40273779 - 40273710
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctag 135  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| | |||||| ||||||||||||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctag 40273710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 52329440 - 52329508
Alignment:
Q  38 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatc 106  Q
    |||||||||||  ||||||| | |||||||||||||| |||||||||| ||  ||||||||||||||||    
T  52329440 tttttatgaaacgttaataattaagactgaaatctaagggtgattattctgctatgtcattcttgaatc 52329508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 16045786 - 16045851
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 16045851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 32000255 - 32000320
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||| ||||| ||||||||||||||||||| |||||| | |||||| ||||||||||    
T  32000255 aaatctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatat 32000320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 40215065 - 40215000
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 40215000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 18404519 - 18404454
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    ||||||||||||||||||| |  |||||||||||| ||  |||||| |||||||| ||||||||||    
T  18404519 aaatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatat 18404454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 25463753 - 25463688
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  25463753 aaatctaagggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatat 25463688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 44094775 - 44094710
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||  ||||||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 44094710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 17175945 - 17175824
Alignment:
Q  15 gggtggtgggtattatgtatttattttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  17175945 gggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttctta 17175846  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  17175845 taaaatcattcttgatatctag 17175824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 32702346 - 32702467
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  32702346 gggtggtgggtcttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatttttctta 32702445  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  32702446 taaaatcattcttgatatctag 32702467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 18365497 - 18365377
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    |||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  18365497 gggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttat 18365398  T
Q  115 aaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||    
T  18365397 aaaatcattcttgatatctag 18365377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 18370761 - 18370641
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    |||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  18370761 gggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttat 18370662  T
Q  115 aaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||    
T  18370661 aaaatcattcttgatatctag 18370641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 33696837 - 33696959
Alignment:
Q  15 gggtggtgggtattatgta--tttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    ||||||||||| |||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  33696837 gggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttctt 33696936  T
Q  113 ataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||||    
T  33696937 ataaaatcattcttgatatctag 33696959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 28675289 - 28675410
Alignment:
Q  15 gggtggtgggtattatgtatttatt-tttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||  |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28675289 gggtggtgggggttatgtattttttatttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctta 28675388  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  28675389 taaaatcattcttgatatctag 28675410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 33695251 - 33695129
Alignment:
Q  15 gggtggtgggtattatgta--tttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    ||||||||||| |||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| ||||||    
T  33695251 gggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatatcattcttaaatatttctt 33695152  T
Q  113 ataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||||    
T  33695151 ataaaatcattcttgatatctag 33695129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 17705386 - 17705272
Alignment:
Q  18 tggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaa 117  Q
    |||||||| ||||||| ||  ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17705386 tggtgggtgttatgtaatt--ttttatgaaaggttaataaatgagactgaaatctaa-ggtgattattgtgtcatgtcattcttgaatctttcttataaa 17705290  T
Q  118 atcattcttgatatctag 135  Q
    ||||||||||||||||||    
T  17705289 atcattcttgatatctag 17705272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 6031665 - 6031546
Alignment:
Q  15 gggtggtgggtattatgtatttattttt--atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    ||||||||||| |||||||||| |||||  || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||    
T  6031665 gggtggtgggtgttatgtatttttttttttataaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttttt 6031566  T
Q  113 ataaaatcattcttgatatc 132  Q
    ||||||||||||||||||||    
T  6031565 ataaaatcattcttgatatc 6031546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 2309347 - 2309226
Alignment:
Q  15 gggtggtgggtattatgtatttattttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    |||| |||||| |||||||||| ||||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  2309347 gggttgtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctta 2309248  T
Q  114 taaaatcattcttgatatctag 135  Q
    |||||||||  |||||||||||    
T  2309247 taaaatcatcgttgatatctag 2309226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 18889567 - 18889470
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  18889567 gggtggtgggttttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcattctt 18889470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 23290981 - 23290884
Alignment:
Q  38 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||    
T  23290981 tttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgccatatcattcttgaatctttcttataaaatcatttttgatatctag 23290884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 6127417 - 6127506
Alignment:
Q  15 gggtggtgggtattatgtatttatttttat--gaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttg 102  Q
    ||||||||||| |||||||||| |||||||  ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  6127417 gggtggtgggtgttatgtatttttttttatatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttg 6127506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 11548474 - 11548392
Alignment:
Q  53 aataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||   ||||||||||||||||||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgataaatcattcttgatatctag 11548392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 29693610 - 29693708
Alignment:
Q  38 tttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctag 135  Q
    ||||||||||||  |||||||| |||||||||||||| ||| |||||| || |||||||||||| |||||||||| |||||||||||||||||||||||    
T  29693610 tttttatgaaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctag 29693708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 77 - 135
Target Start/End: Complemental strand, 34238948 - 34238890
Alignment:
Q  77 gtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatcttcttgataaaatcattcttgatatctag 34238890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 9752169 - 9752109
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaa 75  Q
    ||||| ||||| |||||||||| |||||||||||| |||||||||||||||||||||||||    
T  9752169 gggtgatgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatctaaa 9752109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 109
Target Start/End: Complemental strand, 8515650 - 8515556
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatcttt 109  Q
    ||||||||| | |||||||||| |||||||||||  ||||||||| ||||||||||||||  ||||||||| |  ||||||||| || |||||||    
T  8515650 gggtggtggatgttatgtatttttttttatgaaatgttaataaataagactgaaatctaagagtgattattctaccatgtcatttttaaatcttt 8515556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 25987071 - 25987126
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaa 69  Q
    ||||||||||| |||||||| || |||||||||||||||| |||||||||||||||    
T  25987071 gggtggtgggtgttatgtatcttttttttatgaaagattagtaaatgagactgaaa 25987126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 17176009 - 17176074
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| ||||||||||||||||||  ||| || |||||||| ||||||||||    
T  17176009 aaatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatat 17176074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 17705453 - 17705518
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  17705453 aaatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 17705518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 33695315 - 33695380
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 33695380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 33696773 - 33696708
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 33696708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 134
Target Start/End: Complemental strand, 582602 - 582531
Alignment:
Q  65 tgaaatctaaaggtgattattgtgtc-atgtcattcttgaatctttctta-taaaatcattcttgatatcta 134  Q
    |||||||||| |||||||||| || | || |||||||| ||| ||||||| |||||||||||||||||||||    
T  582602 tgaaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatcta 582531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 2121058 - 2120993
Alignment:
Q  90 catgtcattcttgaatctttctt-ataaaatcattcttgatatctagattttttccataaaaaatat 155  Q
    |||||||||||||||||||| || ||||||||||| |||||||||| |  ||||||||| |||||||    
T  2121058 catgtcattcttgaatctttttttataaaatcatttttgatatcta-acattttccatataaaatat 2120993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 6127352 - 6127287
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  6127352 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 6127287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 11548576 - 11548621
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt 112  Q
    |||||||| |||||||||| || |||||||||||||||| ||||||    
T  11548576 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 11548621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 23291072 - 23291137
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  23291072 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 23291137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 28675225 - 28675160
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| ||||||||||  | |||||||||||||||  |||||| |||||||| ||||||||||    
T  28675225 aaatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatat 28675160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 41152 - 41272
Alignment:
Q  15 gggtggtgggtattatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttat 114  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||| |||||||||||    
T  41152 gggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatatcattcttggatctttcttat 41251  T
Q  115 aaaatcattcttgatatctag 135  Q
    |||||||||||||||||||||    
T  41252 aaaatcattcttgatatctag 41272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 41088 - 41023
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttg-aatctttcttataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || ||||||||||||| ||| ||| | |||||||| ||||||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 41023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 95; Significance: 2e-46; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 26080 - 26198
Alignment:
Q  18 tggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataa 116  Q
    |||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  26080 tggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataa 26179  T
Q  117 aatcattcttgatatctag 135  Q
    |||||||||||||||||||    
T  26180 aatcattcttgatatctag 26198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 16128 - 16246
Alignment:
Q  18 tggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataa 116  Q
    |||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||    
T  16128 tggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataa 16227  T
Q  117 aatcattcttgatatctag 135  Q
    |||||||||||||||||||    
T  16228 aatcattcttgatatctag 16246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 8546 - 8605
Alignment:
Q  18 tggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaag 76  Q
    |||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||    
T  8546 tggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaag 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 8479 - 8414
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 16061 - 15996
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 26013 - 25948
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 12983 - 13104
Alignment:
Q  15 gggtggtgggtattatgtat-ttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||| | |||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||    
T  12983 gggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttctta 13082  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  13083 taaaatcattcttgatatctag 13104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 89; Significance: 6e-43; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 11762 - 11882
Alignment:
Q  15 gggtggtgggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    |||||||| || |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||    
T  11762 gggtggtgagtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctta 11861  T
Q  114 taaaatcattcttgatatcta 134  Q
    |||||||||||||||||||||    
T  11862 taaaatcattcttgatatcta 11882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 11698 - 11633
Alignment:
Q  67 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 131  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  11698 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 11633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 4537 - 4658
Alignment:
Q  15 gggtggtgggtattatgtatttatttt-tatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatctttctta 113  Q
    ||||||||||| |||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||||    
T  4537 gggtggtgggtgttatgtatctgttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttctta 4636  T
Q  114 taaaatcattcttgatatctag 135  Q
    ||||||||||||||||||||||    
T  4637 taaaatcattcttgatatctag 4658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 3200 - 3252
Alignment:
Q  11 catagggtggtgggtattatgtatttatttt-tatgaaagattaataaatgag 62  Q
    ||||||||||||||| |||||||||| |||| |||||||||||||||||||||    
T  3200 catagggtggtgggtgttatgtattttttttttatgaaagattaataaatgag 3252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 192
Target Start/End: Complemental strand, 297970 - 297931
Alignment:
Q  154 atatcaatcagagaaaaaa-tattcttctcaaatcaaact 192  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  297970 atatcaatcagagaaaaaaatattcttctcaaatcaaact 297931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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