View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2504_low_54 (Length: 259)
Name: NF2504_low_54
Description: NF2504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2504_low_54 |
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Alignment Details
Target: chr7 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 56 - 238
Target Start/End: Complemental strand, 6888838 - 6888653
Alignment:
| Q |
56 |
cccgaatattaattgggaacacgttgaacatatcaaaactaagtaagttaaaaacagagaaaatggtaagaagacacttaccgttactactgggaattat |
155 |
Q |
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| T |
6888838 |
cccgaatattaattgggaacacgttgaacatatcaaaactaagtaagttaaaaacagagaaaatggtaagaagacacttaccgttactactgggaattat |
6888739 |
T |
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| Q |
156 |
agacagcaacgttggaatcagatagagaagaaacgttgttgaatagtgttgaga---agaataaacgaaagagagtttttgaaaga |
238 |
Q |
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| T |
6888738 |
agacagcaacgttggaatcagatagagaagaaacgttgttgaatagtgttgagaagaagaataaacgaaagagggtttttgaaaga |
6888653 |
T |
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