View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2504_low_6 (Length: 596)

Name: NF2504_low_6
Description: NF2504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2504_low_6
NF2504_low_6
[»] chr6 (36 HSPs)
chr6 (5-580)||(2034442-2035017)
chr6 (5-274)||(2028059-2028330)
chr6 (346-429)||(2027955-2028038)
chr6 (460-580)||(2027402-2027530)
chr6 (477-579)||(4420609-4420716)
chr6 (389-511)||(9027456-9027575)
chr6 (506-580)||(3168257-3168331)
chr6 (447-516)||(3217257-3217327)
chr6 (448-513)||(10452430-10452496)
chr6 (447-508)||(2456885-2456946)
chr6 (447-513)||(2514635-2514702)
chr6 (506-581)||(3155176-3155250)
chr6 (506-577)||(4246410-4246481)
chr6 (447-506)||(8010290-8010349)
chr6 (534-581)||(9667980-9668027)
chr6 (481-511)||(12757522-12757552)
chr6 (481-511)||(14656317-14656347)
chr6 (477-574)||(32386108-32386205)
chr6 (477-581)||(1402960-1403071)
chr6 (453-513)||(10032510-10032571)
chr6 (447-511)||(10154154-10154219)
chr6 (506-579)||(19275633-19275706)
chr6 (443-495)||(29940725-29940778)
chr6 (477-506)||(30784521-30784550)
chr6 (448-513)||(32513759-32513824)
chr6 (394-465)||(32917107-32917177)
chr6 (551-580)||(32976023-32976052)
chr6 (536-580)||(3738099-3738143)
chr6 (477-513)||(7785812-7785848)
chr6 (545-581)||(9027617-9027653)
chr6 (393-429)||(9041568-9041604)
chr6 (477-513)||(27595637-27595673)
chr6 (534-578)||(27909636-27909680)
chr6 (450-513)||(29274299-29274363)
chr6 (481-513)||(32980509-32980541)
chr6 (553-581)||(33284290-33284318)
[»] chr4 (37 HSPs)
chr4 (450-580)||(22684517-22684650)
chr4 (505-581)||(27721716-27721792)
chr4 (447-580)||(21157701-21157842)
chr4 (447-576)||(4798566-4798696)
chr4 (443-580)||(23819019-23819163)
chr4 (391-511)||(24193466-24193583)
chr4 (509-567)||(35290196-35290254)
chr4 (477-566)||(47800594-47800683)
chr4 (482-581)||(21952930-21953023)
chr4 (544-580)||(29467620-29467656)
chr4 (447-510)||(36734826-36734890)
chr4 (389-490)||(485960-486058)
chr4 (536-579)||(7063522-7063565)
chr4 (447-513)||(21593082-21593148)
chr4 (477-512)||(32724083-32724118)
chr4 (447-505)||(47970251-47970310)
chr4 (506-581)||(50800025-50800099)
chr4 (477-579)||(54325034-54325143)
chr4 (481-524)||(55437345-55437388)
chr4 (479-541)||(6360748-6360810)
chr4 (520-574)||(19429723-19429777)
chr4 (447-513)||(44319883-44319949)
chr4 (477-511)||(52735086-52735120)
chr4 (446-508)||(54462175-54462236)
chr4 (506-579)||(34398682-34398755)
chr4 (477-513)||(4071846-4071882)
chr4 (545-581)||(6978957-6978993)
chr4 (534-574)||(9843255-9843295)
chr4 (477-513)||(20936072-20936108)
chr4 (477-513)||(27623599-27623635)
chr4 (514-566)||(32066096-32066148)
chr4 (544-580)||(32799736-32799772)
chr4 (447-510)||(42321952-42322016)
chr4 (506-578)||(46415790-46415862)
chr4 (447-498)||(51044544-51044596)
chr4 (447-494)||(51555956-51556004)
chr4 (488-532)||(52734785-52734829)
[»] chr5 (33 HSPs)
chr5 (447-513)||(32059659-32059725)
chr5 (389-495)||(20982223-20982326)
chr5 (447-565)||(11684356-11684473)
chr5 (391-581)||(32172534-32172728)
chr5 (392-490)||(26516180-26516275)
chr5 (458-567)||(11615452-11615562)
chr5 (443-507)||(7096203-7096268)
chr5 (486-566)||(32197700-32197780)
chr5 (477-513)||(39823191-39823227)
chr5 (505-580)||(18543193-18543267)
chr5 (447-513)||(35135732-35135799)
chr5 (450-511)||(37063146-37063208)
chr5 (507-580)||(17258879-17258952)
chr5 (391-494)||(29115302-29115402)
chr5 (515-580)||(40205070-40205135)
chr5 (479-511)||(26516366-26516398)
chr5 (545-581)||(32194074-32194110)
chr5 (447-513)||(19177412-19177479)
chr5 (506-579)||(5284445-5284518)
chr5 (506-568)||(16944991-16945053)
chr5 (534-580)||(28586762-28586808)
chr5 (515-581)||(37611210-37611276)
chr5 (515-581)||(37787940-37788006)
chr5 (391-429)||(39257537-39257575)
chr5 (477-511)||(39750107-39750141)
chr5 (391-440)||(2468318-2468367)
chr5 (506-567)||(7984969-7985030)
chr5 (506-579)||(11707055-11707128)
chr5 (507-567)||(4014433-4014493)
chr5 (389-429)||(6725116-6725156)
chr5 (545-581)||(11700373-11700409)
chr5 (477-513)||(14295470-14295506)
chr5 (391-438)||(41052771-41052819)
[»] chr3 (41 HSPs)
chr3 (447-566)||(27792805-27792932)
chr3 (452-578)||(20669117-20669244)
chr3 (505-575)||(41644446-41644516)
chr3 (512-581)||(21574496-21574565)
chr3 (447-527)||(25459681-25459760)
chr3 (450-513)||(28779292-28779356)
chr3 (447-513)||(1395604-1395671)
chr3 (443-513)||(8007765-8007836)
chr3 (447-507)||(16790432-16790493)
chr3 (520-581)||(36200110-36200171)
chr3 (505-581)||(1816582-1816658)
chr3 (506-581)||(3015838-3015913)
chr3 (447-510)||(20192679-20192743)
chr3 (509-581)||(31010405-31010477)
chr3 (506-569)||(237397-237460)
chr3 (515-566)||(9279336-9279387)
chr3 (450-511)||(22232762-22232824)
chr3 (477-566)||(23793552-23793644)
chr3 (477-507)||(33434083-33434113)
chr3 (515-581)||(37273143-37273209)
chr3 (515-569)||(44284087-44284141)
chr3 (477-523)||(53736173-53736219)
chr3 (447-507)||(3757981-3758042)
chr3 (506-579)||(13709820-13709893)
chr3 (506-567)||(27294346-27294407)
chr3 (458-526)||(42808923-42808992)
chr3 (515-568)||(43948664-43948717)
chr3 (544-577)||(48048981-48049014)
chr3 (506-575)||(48286811-48286880)
chr3 (536-581)||(50004682-50004727)
chr3 (447-507)||(52413197-52413258)
chr3 (515-580)||(54180776-54180841)
chr3 (477-513)||(12923395-12923431)
chr3 (545-581)||(13804816-13804852)
chr3 (544-576)||(22214659-22214691)
chr3 (544-580)||(27290897-27290933)
chr3 (544-580)||(30923894-30923930)
chr3 (389-429)||(37308216-37308256)
chr3 (545-581)||(41724251-41724287)
chr3 (531-579)||(45432936-45432984)
chr3 (477-513)||(49586986-49587022)
[»] chr7 (28 HSPs)
chr7 (477-580)||(18749813-18749916)
chr7 (490-581)||(39360007-39360098)
chr7 (447-580)||(26935553-26935687)
chr7 (503-567)||(12792507-12792571)
chr7 (391-495)||(30133932-30134031)
chr7 (389-511)||(31341073-31341192)
chr7 (447-515)||(33894556-33894624)
chr7 (490-579)||(39345455-39345544)
chr7 (506-582)||(4966156-4966232)
chr7 (545-581)||(39539776-39539812)
chr7 (447-497)||(5276157-5276208)
chr7 (508-579)||(9423591-9423662)
chr7 (534-581)||(12234884-12234931)
chr7 (474-576)||(24363601-24363710)
chr7 (447-513)||(31002694-31002761)
chr7 (391-429)||(5010619-5010657)
chr7 (506-580)||(6552288-6552362)
chr7 (544-582)||(27496401-27496439)
chr7 (544-582)||(27503059-27503097)
chr7 (544-581)||(27517851-27517888)
chr7 (451-511)||(35536044-35536105)
chr7 (543-580)||(36598352-36598389)
chr7 (506-579)||(44151477-44151550)
chr7 (544-581)||(45078316-45078353)
chr7 (544-581)||(48157115-48157152)
chr7 (447-498)||(3610825-3610877)
chr7 (447-491)||(7274394-7274438)
chr7 (545-581)||(44808197-44808233)
[»] chr8 (34 HSPs)
chr8 (477-567)||(11494117-11494207)
chr8 (477-558)||(6875285-6875366)
chr8 (506-580)||(11795092-11795166)
chr8 (534-581)||(4055611-4055658)
chr8 (506-581)||(11183545-11183620)
chr8 (506-580)||(10383885-10383959)
chr8 (515-581)||(14949875-14949941)
chr8 (515-581)||(25869261-25869327)
chr8 (506-579)||(11813102-11813175)
chr8 (451-527)||(26215433-26215510)
chr8 (447-511)||(35453695-35453760)
chr8 (477-513)||(1470926-1470962)
chr8 (504-580)||(11569453-11569529)
chr8 (506-561)||(7645978-7646033)
chr8 (478-567)||(33714245-33714340)
chr8 (505-579)||(5088851-5088925)
chr8 (443-527)||(5290570-5290650)
chr8 (506-580)||(6509299-6509373)
chr8 (545-579)||(10062138-10062172)
chr8 (515-581)||(33553249-33553315)
chr8 (481-511)||(34213601-34213631)
chr8 (515-580)||(20672759-20672824)
chr8 (447-512)||(26717190-26717254)
chr8 (506-567)||(27028831-27028892)
chr8 (392-429)||(27320198-27320235)
chr8 (477-510)||(27728094-27728127)
chr8 (385-492)||(40280296-40280400)
chr8 (477-521)||(2100769-2100813)
chr8 (544-580)||(3254263-3254299)
chr8 (393-429)||(7008512-7008548)
chr8 (506-566)||(7918783-7918843)
chr8 (544-580)||(12361230-12361266)
chr8 (506-578)||(28769337-28769409)
chr8 (450-513)||(34788497-34788561)
[»] chr1 (40 HSPs)
chr1 (529-579)||(34380468-34380518)
chr1 (507-567)||(5047147-5047207)
chr1 (505-580)||(27140477-27140552)
chr1 (469-579)||(30257639-30257756)
chr1 (447-580)||(45999284-45999425)
chr1 (447-581)||(4699610-4699749)
chr1 (477-526)||(41516137-41516186)
chr1 (477-581)||(45205032-45205143)
chr1 (477-580)||(12477283-12477393)
chr1 (447-511)||(45107556-45107620)
chr1 (506-577)||(6231815-6231886)
chr1 (447-499)||(1730825-1730878)
chr1 (476-513)||(48830146-48830183)
chr1 (513-581)||(35080064-35080132)
chr1 (389-440)||(48133078-48133130)
chr1 (478-580)||(10199404-10199513)
chr1 (506-569)||(12564881-12564944)
chr1 (506-581)||(15579482-15579557)
chr1 (451-513)||(50998489-50998552)
chr1 (515-581)||(3052701-3052767)
chr1 (477-523)||(25719498-25719544)
chr1 (534-580)||(26184776-26184822)
chr1 (515-569)||(29834912-29834966)
chr1 (506-580)||(34290236-34290310)
chr1 (482-560)||(49175595-49175673)
chr1 (544-581)||(17628637-17628674)
chr1 (515-580)||(27963366-27963431)
chr1 (519-580)||(35925703-35925764)
chr1 (516-581)||(37593679-37593744)
chr1 (508-561)||(43332486-43332539)
chr1 (515-580)||(43338125-43338190)
chr1 (515-580)||(52190138-52190203)
chr1 (477-513)||(15360858-15360894)
chr1 (477-513)||(18434548-18434584)
chr1 (477-513)||(28467377-28467413)
chr1 (516-560)||(35590908-35590952)
chr1 (508-580)||(37811854-37811926)
chr1 (505-569)||(39270432-39270496)
chr1 (443-498)||(42550170-42550226)
chr1 (477-513)||(44936660-44936696)
[»] chr2 (40 HSPs)
chr2 (455-563)||(40837448-40837557)
chr2 (514-581)||(34652031-34652098)
chr2 (447-528)||(43808509-43808591)
chr2 (447-566)||(33267534-33267653)
chr2 (451-513)||(17952771-17952834)
chr2 (447-513)||(18962108-18962175)
chr2 (506-581)||(32821809-32821884)
chr2 (515-581)||(1939327-1939393)
chr2 (519-581)||(10285873-10285935)
chr2 (515-581)||(42131626-42131692)
chr2 (515-581)||(43065445-43065511)
chr2 (477-524)||(3458621-3458669)
chr2 (506-578)||(10563556-10563628)
chr2 (477-513)||(31740029-31740065)
chr2 (449-513)||(40722547-40722610)
chr2 (534-581)||(25796195-25796242)
chr2 (447-513)||(28902010-28902077)
chr2 (506-581)||(29633073-29633148)
chr2 (516-579)||(33192212-33192275)
chr2 (545-579)||(10285394-10285428)
chr2 (391-429)||(14316970-14317008)
chr2 (547-580)||(787373-787406)
chr2 (450-510)||(3102629-3102690)
chr2 (396-498)||(3235468-3235568)
chr2 (447-495)||(5045245-5045294)
chr2 (477-526)||(14209241-14209290)
chr2 (544-581)||(14451045-14451082)
chr2 (506-567)||(36415682-36415743)
chr2 (481-513)||(1160814-1160846)
chr2 (505-581)||(1742027-1742103)
chr2 (443-510)||(3423841-3423909)
chr2 (477-513)||(5043630-5043666)
chr2 (544-580)||(6547940-6547976)
chr2 (506-581)||(9174815-9174891)
chr2 (544-580)||(18884905-18884941)
chr2 (477-513)||(28803576-28803612)
chr2 (545-581)||(30538168-30538204)
chr2 (540-580)||(33503041-33503081)
chr2 (452-511)||(34339844-34339904)
chr2 (477-513)||(37292417-37292453)
[»] scaffold0590 (1 HSPs)
scaffold0590 (447-512)||(1145-1211)
[»] scaffold0275 (1 HSPs)
scaffold0275 (447-512)||(2764-2830)
[»] scaffold0024 (2 HSPs)
scaffold0024 (389-510)||(27455-27573)
scaffold0024 (452-527)||(21334-21410)
[»] scaffold0022 (1 HSPs)
scaffold0022 (506-581)||(143057-143132)
[»] scaffold0072 (1 HSPs)
scaffold0072 (519-580)||(4972-5033)
[»] scaffold0153 (2 HSPs)
scaffold0153 (481-513)||(6568-6600)
scaffold0153 (481-513)||(13588-13620)
[»] scaffold0110 (1 HSPs)
scaffold0110 (447-479)||(35901-35933)


Alignment Details
Target: chr6 (Bit Score: 541; Significance: 0; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 541; E-Value: 0
Query Start/End: Original strand, 5 - 580
Target Start/End: Complemental strand, 2035017 - 2034442
Alignment:
Q  5 cataggtctttatcccatataagaggaaatttacaacaagtttaagagaacaacaaaaataagaacaaaaagtgtcacaaacctgataaggacaaacagc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2035017 cataggtctttatcccatataagaggaaatttacaacaagtttaagagaacaacaaaaataagaacaaaaagtgtcacaaacctgataaggacaaacagc 2034918  T
Q  105 aagtcttccaaaactacccgcatttacatgagcagcactgatagagtaagtggctcccttaagtccatgtgagacaagatactcctcagtttcttgaggt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2034917 aagtcttccaaaactacccgcatttacatgagcagcactgatagagtaagtggctcccttaagtccatgtgagacaagatactcctcagtttcttgaggt 2034818  T
Q  205 aaagaaaaccctttaaaaacacttacagcttgaccagaaacctgcttggcaaatcaaaacacttaactgagaaaacctcgtttccgttataaccaaaaca 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2034817 aaagaaaaccctttaaaaacacttacagcttgaccagaaacctgcttgggaaatcaaaacacttaactgagaaaacctcgtttccgttataaccaaaaca 2034718  T
Q  305 atgaagaagacatggttgctttcaggaaggnnnnnnnnnttaaaaccaaccccataagttcaatataaaagagctccatttaggcctgtttggataaaca 404  Q
    ||||||||||||||| ||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2034717 atgaagaagacatggatgctttcaggaaggaaaaaaaaattaaaaccaaccccataagttcaatataaaagagctccatttaggcctgtttggataaaca 2034618  T
Q  405 atttcattaagcgcttatagcataacgcttatcatacaatacaagtgcttatgtataagctgtttttacaacaaagataaaataaagtcaaactactttc 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2034617 atttcattaagcgcttatagcataacgcttatcatacaatacaagtgcttatgtataagctgtttttacaacaaagataaaataaagtcaaactactttc 2034518  T
Q  505 atataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2034517 atataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 2034442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 5 - 274
Target Start/End: Complemental strand, 2028330 - 2028059
Alignment:
Q  5 cataggtctttatcccatataagaggaaa--tttacaacaagtttaagagaacaacaaaaataagaacaaaaagtgtcacaaacctgataaggacaaaca 102  Q
    |||||| |||||||| |||||||||||||  || ||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2028330 cataggcctttatccaatataagaggaaaaattcacaccgagtttaagagaacaacaaaaataagaacaaaaagtgtcacaaacctgatgaggacaaaca 2028231  T
Q  103 gcaagtcttccaaaactacccgcatttacatgagcagcactgatagagtaagtggctcccttaagtccatgtgagacaagatactcctcagtttcttgag 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2028230 gcaagtcttccaaaactacccgcatttacatgagcagcactgatagagtaagtggctcccttaagtccatgtgagacaagatactcctcagtttcttgag 2028131  T
Q  203 gtaaagaaaaccctttaaaaacacttacagcttgaccagaaacctgcttggcaaatcaaaacacttaactga 274  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||| |||| |||||| | ||||||    
T  2028130 gtaaagaaaaccctttaaaaacacttgcagcttcaccagaaacctgcttggaaaatgaaaacattcaactga 2028059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 346 - 429
Target Start/End: Complemental strand, 2028038 - 2027955
Alignment:
Q  346 aaaaccaaccccataagttcaatataaaagagctccatttaggcctgtttggataaacaatttcattaagcgcttatagcataa 429  Q
    |||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  2028038 aaaaccaaccccgtaagttcaatataaaggagctccatttatgcctgtttggataaacagtttcattaagcgcttatatcataa 2027955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 460 - 580
Target Start/End: Complemental strand, 2027530 - 2027402
Alignment:
Q  460 taagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataa-------gcttttttcataagctaacatgtagagcttaatgaaataag 551  Q
    |||||| |||||| |||||| |||||||||||||||||||| ||||||||||       ||| || |||||||||| ||||||||| ||||  |||||||    
T  2027530 taagctatttttataacaaaagataaaataaagtcaaactattttcatataacctataagctgttctcataagctagcatgtagagtttaaataaataag 2027431  T
Q  552 ctgaaaacagcttatggaaatgtcataag 580  Q
    |||||||||||||||||||||||||||||    
T  2027430 ctgaaaacagcttatggaaatgtcataag 2027402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 477 - 579
Target Start/End: Original strand, 4420609 - 4420716
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagctt-----ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaa 571  Q
    ||||||||||||||||||||||| |||  ||||||||      ||||| ||||||| | || ||||||||  |||||||||||||||||||||||| | |    
T  4420609 aaagataaaataaagtcaaactatttttgtataagctaagttattttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaaca 4420708  T
Q  572 tgtcataa 579  Q
    ||||||||    
T  4420709 tgtcataa 4420716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 511
Target Start/End: Original strand, 9027456 - 9027575
Alignment:
Q  389 cctgtttggataaacaatttcattaagcgcttatagcat-aacgcttatcatacaatacaagtgcttatgtataagctgtttttacaaca-aagataaaa 486  Q
    |||||||||||||||| ||| | |||||||||||||||| ||| ||||| ||| ||     |||||||| |||||||| ||| ||||| | |||||||||    
T  9027456 cctgtttggataaacagtttaagtaagcgcttatagcatgaacacttattatataa-----gtgcttatctataagctatttctacaatagaagataaaa 9027550  T
Q  487 taaagtcaaactactttcatataag 511  Q
    ||||||||||||  ||| |||||||    
T  9027551 taaagtcaaactgttttaatataag 9027575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 580
Target Start/End: Complemental strand, 3168331 - 3168257
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    ||||| || ||||| ||||||| | || ||||||||| |||||||||||||||||||  ||||| ||||||||||    
T  3168331 tataaactgttttcttaagctatcctggagagcttaaggaaataagctgaaaacagccgatggacatgtcataag 3168257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 516
Target Start/End: Complemental strand, 3217327 - 3217257
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaaca-aagataaaataaagtcaaactactttcatataagctttt 516  Q
    ||||||||||||||||||| |||||  || | ||||||||||||||||||| || ||||||||||| ||||    
T  3217327 aagtgcttatgtataagctatttttgtaagagaagataaaataaagtcaaattattttcatataagatttt 3217257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 513
Target Start/End: Complemental strand, 10452496 - 10452430
Alignment:
Q  448 agtgcttatgtataagctgtttttacaacaaag-ataaaataaagtcaaactactttcatataagct 513  Q
    |||||||||||||||||| ||| || ||||||  |||||||||| |||||||| |||||||||||||    
T  10452496 agtgcttatgtataagctatttctataacaaaatataaaataaaatcaaactattttcatataagct 10452430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 447 - 508
Target Start/End: Original strand, 2456885 - 2456946
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaagataaaataaagtcaaactactttcatat 508  Q
    |||||||||||||||| || |||  | |||||||||||||||||||||| || |||||||||    
T  2456885 aagtgcttatgtataaactatttcgataacaaagataaaataaagtcaagctgctttcatat 2456946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 513
Target Start/End: Original strand, 2514635 - 2514702
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagct 513  Q
    ||||||||||||||||||| ||| || || ||| |||||||||||||||||||| ||| |||| ||||    
T  2514635 aagtgcttatgtataagctatttctataataaaagataaaataaagtcaaactaattttatatgagct 2514702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 581
Target Start/End: Original strand, 3155176 - 3155250
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||| |||||||||| || | || |||||| |  ||||||||||||||||||||||| || |||||||||||    
T  3155176 tataagctattttcataagatatcctggagagct-atggaaataagctgaaaacagcttatagacatgtcataagt 3155250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 577
Target Start/End: Original strand, 4246410 - 4246481
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcat 577  Q
    |||||||| |||||||||||||  ||| ||||| ||   ||||||| ||||||||||||||||| |||||||    
T  4246410 tataagctgttttcataagctattatggagagcatataaaaataagttgaaaacagcttatggacatgtcat 4246481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 506
Target Start/End: Original strand, 8010290 - 8010349
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaagataaaataaagtcaaactactttcat 506  Q
    ||||||||| ||||||||| ||| || |||||  ||||||||||||||| ||||||||||    
T  8010290 aagtgcttaggtataagctatttctataacaacaataaaataaagtcaatctactttcat 8010349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 534 - 581
Target Start/End: Complemental strand, 9668027 - 9667980
Alignment:
Q  534 agagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||||||  |||||||| ||||||||||||||||| |||||||||||    
T  9668027 agagcttatggaaataagttgaaaacagcttatggacatgtcataagt 9667980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 511
Target Start/End: Original strand, 12757522 - 12757552
Alignment:
Q  481 ataaaataaagtcaaactactttcatataag 511  Q
    |||||||||||||||||||||||||||||||    
T  12757522 ataaaataaagtcaaactactttcatataag 12757552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 511
Target Start/End: Complemental strand, 14656347 - 14656317
Alignment:
Q  481 ataaaataaagtcaaactactttcatataag 511  Q
    |||||||||||||||||||||||||||||||    
T  14656347 ataaaataaagtcaaactactttcatataag 14656317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 574
Target Start/End: Complemental strand, 32386205 - 32386108
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagcttttttcataagctaacatgtagagcttaatgaaa-taagctgaaaacagcttatggaaatgt 574  Q
    |||||||||||||||| |||||  ||| ||||||||| ||||||| || || | || | ||||| |||||| ||||||||||||| |||||||| ||||    
T  32386205 aaagataaaataaagtaaaactgtttttatataagctgttttcattagttatcctggaaagctt-atgaaagtaagctgaaaacaacttatggacatgt 32386108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 581
Target Start/End: Original strand, 1402960 - 1403071
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagc-------ttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatgga 569  Q
    |||||||||||||||| |||||| ||||||||||||       | ||||||||||||| |||| ||| ||||  ||||| ||||||| | || |||| ||    
T  1402960 aaagataaaataaagttaaactattttcatataagctataaattgttttcataagctatcatggagatcttatagaaattagctgaatatagtttataga 1403059  T
Q  570 aatgtcataagt 581  Q
     |||||||||||    
T  1403060 tatgtcataagt 1403071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 513
Target Start/End: Original strand, 10032510 - 10032571
Alignment:
Q  453 ttatgtataagctgtttttacaacaa-agataaaataaagtcaaactactttcatataagct 513  Q
    ||||||||||||| |||||| ||||| || | |||||||| ||||||| |||||||||||||    
T  10032510 ttatgtataagctatttttataacaataggtgaaataaaggcaaactaatttcatataagct 10032571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 10154154 - 10154219
Alignment:
Q  447 aagtgcttatgtataagctgtttttaca-acaaagataaaataaagtcaaactactttcatataag 511  Q
    |||||||| |||| ||||||||| || | | ||||||||||||||||||||||  |||||||||||    
T  10154154 aagtgcttctgtacaagctgtttctatagaaaaagataaaataaagtcaaactgttttcatataag 10154219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 579
Target Start/End: Complemental strand, 19275706 - 19275633
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataa 579  Q
    ||||| || ||||||||||||| |||| ||||||||  ||||||| | |||| |||||| |||| |||||||||    
T  19275706 tataaactgttttcataagctatcatgaagagcttatggaaataaaccgaaatcagcttgtggacatgtcataa 19275633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 495
Target Start/End: Original strand, 29940725 - 29940778
Alignment:
Q  443 atacaagtgcttatgtataagctgtttttacaac-aaagataaaataaagtcaa 495  Q
    ||||||||||||| ||||||||| ||| || ||| |||||||||||||||||||    
T  29940725 atacaagtgcttaagtataagctttttctataacaaaagataaaataaagtcaa 29940778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 506
Target Start/End: Original strand, 30784521 - 30784550
Alignment:
Q  477 aaagataaaataaagtcaaactactttcat 506  Q
    ||||||||||||||||||||||||||||||    
T  30784521 aaagataaaataaagtcaaactactttcat 30784550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 513
Target Start/End: Original strand, 32513759 - 32513824
Alignment:
Q  448 agtgcttatgtataagctgtttttacaacaaagataaaataaagtcaaactactttcatataagct 513  Q
    |||| ||||| ||||| | ||| || |||||| ||||||||||||||||||| || ||||||||||    
T  32513759 agtgtttatgcataagttatttctataacaaaaataaaataaagtcaaactatttccatataagct 32513824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 32917107 - 32917177
Alignment:
Q  394 ttggataaacaatttcattaagcgcttatagcata-acgcttatcatacaatacaagtgcttatgtataagct 465  Q
    |||||||||||| || |||||||||||||||| || ||| |||||||  | || |||||||||||||||||||    
T  32917107 ttggataaacaacttaattaagcgcttatagcgtagacgtttatcat--attataagtgcttatgtataagct 32917177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 580
Target Start/End: Original strand, 32976023 - 32976052
Alignment:
Q  551 gctgaaaacagcttatggaaatgtcataag 580  Q
    ||||||||||||||||||||||||||||||    
T  32976023 gctgaaaacagcttatggaaatgtcataag 32976052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 536 - 580
Target Start/End: Original strand, 3738099 - 3738143
Alignment:
Q  536 agcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    |||||| ||||||||| ||||| ||||||||||| ||||||||||    
T  3738099 agcttattgaaataagttgaaagcagcttatggacatgtcataag 3738143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 513
Target Start/End: Complemental strand, 7785848 - 7785812
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagct 513  Q
    ||||||||||||||||||||||  |||||||||||||    
T  7785848 aaagataaaataaagtcaaactcttttcatataagct 7785812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 545 - 581
Target Start/End: Original strand, 9027617 - 9027653
Alignment:
Q  545 aaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||||||||||| |||||||| |||||||||||    
T  9027617 aaataagctgaaaacaacttatggacatgtcataagt 9027653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 429
Target Start/End: Complemental strand, 9041604 - 9041568
Alignment:
Q  393 tttggataaacaatttcattaagcgcttatagcataa 429  Q
    ||||||||||||| || ||||||||||||||||||||    
T  9041604 tttggataaacaacttaattaagcgcttatagcataa 9041568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 513
Target Start/End: Complemental strand, 27595673 - 27595637
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagct 513  Q
    |||||||||||||||||||| || |||||||||||||    
T  27595673 aaagataaaataaagtcaaattattttcatataagct 27595637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 534 - 578
Target Start/End: Complemental strand, 27909680 - 27909636
Alignment:
Q  534 agagcttaatgaaataagctgaaaacagcttatggaaatgtcata 578  Q
    ||||||||  ||||||||||||||||| |||||||| ||||||||    
T  27909680 agagcttatggaaataagctgaaaacaacttatggacatgtcata 27909636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 450 - 513
Target Start/End: Complemental strand, 29274363 - 29274299
Alignment:
Q  450 tgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagct 513  Q
    |||||||||||||||| ||| || | |||| ||||||||||||||||| |  |||||||||||||    
T  29274363 tgcttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagct 29274299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 513
Target Start/End: Original strand, 32980509 - 32980541
Alignment:
Q  481 ataaaataaagtcaaactactttcatataagct 513  Q
    ||||||||||||||||||||||||||| |||||    
T  32980509 ataaaataaagtcaaactactttcataaaagct 32980541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 553 - 581
Target Start/End: Original strand, 33284290 - 33284318
Alignment:
Q  553 tgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||||||||||||||||||||||||    
T  33284290 tgaaaacagcttatggaaatgtcataagt 33284318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 6e-20; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 450 - 580
Target Start/End: Complemental strand, 22684650 - 22684517
Alignment:
Q  450 tgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagcttttttcataagctaa--catgtagagcttaatgaa 546  Q
    ||||| |||||||||| ||| || |||||| | ||||||||||||||| |  ||||||||||||| || ||||||||||   | || ||||||||| |||    
T  22684650 tgcttctgtataagctatttctataacaaacggtaaaataaagtcaaattgttttcatataagctgttctcataagctatatcttgaagagcttaaagaa 22684551  T
Q  547 ataagctgaaaacagcttatggaaatgtcataag 580  Q
    ||||||||||||||||||||||| || |||||||    
T  22684550 ataagctgaaaacagcttatggacatatcataag 22684517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 505 - 581
Target Start/End: Original strand, 27721716 - 27721792
Alignment:
Q  505 atataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||||||| |||||||||| || | || |||||||    ||||||||||||||||||||||||| |||||||||||    
T  27721716 atataagctgttttcataagttatcctggagagcttgcgaaaataagctgaaaacagcttatggatatgtcataagt 27721792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 447 - 580
Target Start/End: Original strand, 21157701 - 21157842
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaag-ataaaataaagtcaaactactttcatataagcttt-------tttcataagctaacatgtagagc 538  Q
    |||||||||||||| |||| |||| | ||||||| ||||| ||||||||||||  |||||| |||||| |       ||||||| |||| | || |||||    
T  21157701 aagtgcttatgtatcagctattttgataacaaagtataaactaaagtcaaactgttttcatgtaagctataagatgttttcatatgctatcctgaagagc 21157800  T
Q  539 ttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    |||  |||||||||| |||||||||| || ||||||||||||    
T  21157801 ttatggaaataagctaaaaacagcttttgtaaatgtcataag 21157842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 576
Target Start/End: Complemental strand, 4798696 - 4798566
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagcttttttcataagctaacatgtagagcttaatga 545  Q
    ||||||||||||||||||| ||| || | |||| |||||||||||||| || |  |||| |  ||| | ||||||||||||| | || ||||||||   |    
T  4798696 aagtgcttatgtataagctatttctatatcaaaagataaaataaagtctaaatgttttcctgcaagttgttttcataagctatcttggagagcttatgca 4798597  T
Q  546 aataagctgaaaacagcttatggaaatgtca 576  Q
    |||||||| ||||||||||||| | ||||||    
T  4798596 aataagctcaaaacagcttatgtacatgtca 4798566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 580
Target Start/End: Original strand, 23819019 - 23819163
Alignment:
Q  443 atacaagtgcttatgtataagctgtttttacaacaaagataaaataaagtcaaactactttcatataagcttt-------tttcataagctaacatgtag 535  Q
    ||||||||| ||||||||||| | |||  | |||||| |||||||  |||||||||  ||||||||||| | |       |||||||||||| | || ||    
T  23819019 atacaagtgtttatgtataagttatttccataacaaatataaaatgtagtcaaactgttttcatataagttataacatgttttcataagctatcttgaag 23819118  T
Q  536 agcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    ||||||  |||||||| |||||||| |||||||| ||||||||||    
T  23819119 agcttatagaaataagatgaaaacaacttatggacatgtcataag 23819163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 511
Target Start/End: Original strand, 24193466 - 24193583
Alignment:
Q  391 tgtttggataaacaatttcattaagcgcttatagcataa-cgcttatcatacaatacaagtgcttatgtataagctgtttttacaac-aaagataaaata 488  Q
    ||||||||||||||| || ||| ||| |||||||||||| ||||||||||| ||     || |||||||||||| | |||||||||| ||| |||||| |    
T  24193466 tgtttggataaacaacttaattgagcacttatagcataaacgcttatcatataa-----gtacttatgtataagttatttttacaacaaaatataaaaca 24193560  T
Q  489 aagtcaaactactttcatataag 511  Q
     ||| |||||| |||||||||||    
T  24193561 gagttaaactattttcatataag 24193583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 509 - 567
Target Start/End: Complemental strand, 35290254 - 35290196
Alignment:
Q  509 aagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatg 567  Q
    ||||||||||||||||||| | |  |||||||| | |||||||||||||||||||||||    
T  35290254 aagcttttttcataagctatctttaagagcttactaaaataagctgaaaacagcttatg 35290196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 477 - 566
Target Start/End: Original strand, 47800594 - 47800683
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttat 566  Q
    |||||||||||||||| ||| |  |||  |||||||| ||||||||||||| | || ||||||||   ||||||||||||||| ||||||    
T  47800594 aaagataaaataaagttaaaatgtttttgtataagctgttttcataagctatcttgaagagcttatgaaaataagctgaaaaccgcttat 47800683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 482 - 581
Target Start/End: Original strand, 21952930 - 21953023
Alignment:
Q  482 taaaataaagtcaaactactttcatataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||||||||||||| |  |||||||||||||      |||||||| | | |||||||||| ||||||| || ||||||| ||||||| |||||||||||    
T  21952930 taaaataaagtcaaattgttttcatataagct------ataagctatcctatagagcttaaggaaataaactaaaaacaggttatggacatgtcataagt 21953023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 544 - 580
Target Start/End: Complemental strand, 29467656 - 29467620
Alignment:
Q  544 gaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    |||||||||||||||||||||||||| ||||||||||    
T  29467656 gaaataagctgaaaacagcttatggacatgtcataag 29467620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 510
Target Start/End: Original strand, 36734826 - 36734890
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataa 510  Q
    |||||||||||||||| || ||| || |||||| | |||||||||||||||||| ||||||||||    
T  36734826 aagtgcttatgtataatctctttctataacaaaaggtaaaataaagtcaaactattttcatataa 36734890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 490
Target Start/End: Original strand, 485960 - 486058
Alignment:
Q  389 cctgtttggataaacaatttcattaagcgcttatagcataa-cgcttatcatacaatacaagtgcttatgtataagctgtttttacaac-aaagataaaa 486  Q
    ||||||||||| ||| | || |||||||||||||||||||| ||||||||||| ||     ||||||||||||| ||| ||| || ||| ||||||||||    
T  485960 cctgtttggatgaactacttaattaagcgcttatagcataagcgcttatcataaaa-----gtgcttatgtatatgctatttctaaaacaaaagataaaa 486054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 536 - 579
Target Start/End: Original strand, 7063522 - 7063565
Alignment:
Q  536 agcttaatgaaataagctgaaaacagcttatggaaatgtcataa 579  Q
    ||||||| |||| |||||||||| ||||||||||||||||||||    
T  7063522 agcttaaagaaaaaagctgaaaatagcttatggaaatgtcataa 7063565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 513
Target Start/End: Complemental strand, 21593148 - 21593082
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaac-aaagataaaataaagtcaaactactttcatataagct 513  Q
    |||||||||||||||| || ||| || ||| ||||||||||||||||| ||||| |||||||||||||    
T  21593148 aagtgcttatgtataaactatttctataactaaagataaaataaagtc-aactattttcatataagct 21593082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 512
Target Start/End: Original strand, 32724083 - 32724118
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagc 512  Q
    ||||||||||||||||||||||| ||||||||||||    
T  32724083 aaagataaaataaagtcaaactattttcatataagc 32724118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 505
Target Start/End: Original strand, 47970251 - 47970310
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaac-aaagataaaataaagtcaaactactttca 505  Q
    ||||||||||||||||||| ||| || ||| ||||||||||| ||||||||||| |||||    
T  47970251 aagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaaactattttca 47970310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 581
Target Start/End: Complemental strand, 50800099 - 50800025
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||| ||||| ||||||| |||| ||| |||   ||||||||||||||||||||||| || |||||||||||    
T  50800099 tataagctgttttcttaagctatcatggagaactttg-gaaataagctgaaaacagcttatagacatgtcataagt 50800025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 579
Target Start/End: Complemental strand, 54325143 - 54325034
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagcttt-------tttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatgga 569  Q
    ||||||||||||||||||||||  ||||||||||||| |       ||||| |||||| |||| |||| |||  || |||| ||||||||||||||||||    
T  54325143 aaagataaaataaagtcaaactgttttcatataagctataagctattttcaaaagctatcatggagagtttatggagataaactgaaaacagcttatgga 54325044  T
Q  570 aatgtcataa 579  Q
     || ||||||    
T  54325043 catatcataa 54325034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 524
Target Start/End: Complemental strand, 55437388 - 55437345
Alignment:
Q  481 ataaaataaagtcaaactactttcatataagcttttttcataag 524  Q
    |||||||||||||||| || ||||||||||||| ||||||||||    
T  55437388 ataaaataaagtcaaattattttcatataagctattttcataag 55437345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 541
Target Start/End: Complemental strand, 6360810 - 6360748
Alignment:
Q  479 agataaaataaagtcaaactactttcatataagcttttttcataagctaacatgtagagctta 541  Q
    ||||||||||||||||||    ||||||||| ||| ||||||||||||| |||| ||||||||    
T  6360810 agataaaataaagtcaaatctttttcatatacgctgttttcataagctatcatggagagctta 6360748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 520 - 574
Target Start/End: Original strand, 19429723 - 19429777
Alignment:
Q  520 ataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgt 574  Q
    |||||||| | || ||||||||  ||||||||||||||||||||||||| |||||    
T  19429723 ataagctatcctggagagcttatggaaataagctgaaaacagcttatggcaatgt 19429777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 513
Target Start/End: Original strand, 44319883 - 44319949
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaagataaaataaagtcaaactactttcatataagct 513  Q
    ||||||| |||||||| || ||| || || ||||||||||||||||| ||||  |||||||||||||    
T  44319883 aagtgctcatgtataaactatttctataaaaaagataaaataaagtcgaactgttttcatataagct 44319949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 511
Target Start/End: Original strand, 52735086 - 52735120
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataag 511  Q
    |||||||||||||||||||| ||||||||||||||    
T  52735086 aaagataaaataaagtcaaattactttcatataag 52735120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 508
Target Start/End: Complemental strand, 54462236 - 54462175
Alignment:
Q  446 caagtgcttatgtataagctgtttttacaacaaagataaaataaagtcaaactactttcatat 508  Q
    |||||||||||||| ||||| ||| || ||||| ||| |||||||||||||||| ||||||||    
T  54462236 caagtgcttatgtaaaagctatttctataacaa-gatgaaataaagtcaaactattttcatat 54462175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 579
Target Start/End: Complemental strand, 34398755 - 34398682
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataa 579  Q
    |||||||| ||||||||||| | |||| ||||||||  ||| ||||| ||||||| |||||||  |||||||||    
T  34398755 tataagctgttttcataagccatcatggagagcttatggaagtaagccgaaaacaacttatgggcatgtcataa 34398682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 513
Target Start/End: Original strand, 4071846 - 4071882
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagct 513  Q
    |||||||||||||||||||| || |||||||||||||    
T  4071846 aaagataaaataaagtcaaattattttcatataagct 4071882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 545 - 581
Target Start/End: Complemental strand, 6978993 - 6978957
Alignment:
Q  545 aaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||||||||||||||||| || |||||||||||    
T  6978993 aaataagctgaaaacagcttatagacatgtcataagt 6978957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 534 - 574
Target Start/End: Complemental strand, 9843295 - 9843255
Alignment:
Q  534 agagcttaatgaaataagctgaaaacagcttatggaaatgt 574  Q
    ||||||| ||||||||||||||||||| |||||||| ||||    
T  9843295 agagcttgatgaaataagctgaaaacaacttatggatatgt 9843255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 513
Target Start/End: Complemental strand, 20936108 - 20936072
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagct 513  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  20936108 aaagataaaataaagtcaaactattttcatgtaagct 20936072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 513
Target Start/End: Original strand, 27623599 - 27623635
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagct 513  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  27623599 aaagataaaataaagtcaaactattttaatataagct 27623635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 514 - 566
Target Start/End: Complemental strand, 32066148 - 32066096
Alignment:
Q  514 tttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttat 566  Q
    |||||||||||||| |||||| ||||||  |||||||||| |||||| |||||    
T  32066148 tttttcataagctatcatgtaaagcttatggaaataagcttaaaacatcttat 32066096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 580
Target Start/End: Complemental strand, 32799772 - 32799736
Alignment:
Q  544 gaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    ||||||||||||||||||||||||||  |||||||||    
T  32799772 gaaataagctgaaaacagcttatggatgtgtcataag 32799736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 510
Target Start/End: Complemental strand, 42322016 - 42321952
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataa 510  Q
    ||||| ||||| ||||||| |||||| |||||| ||||||||||||||||| |  ||||||||||    
T  42322016 aagtgtttatgaataagctatttttataacaaatgataaaataaagtcaaattgttttcatataa 42321952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 578
Target Start/End: Complemental strand, 46415862 - 46415790
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcata 578  Q
    |||||| | ||||||||||||| | |  |||||||| | |||| ||||||||||| |||||||| ||||||||    
T  46415862 tataagttcttttcataagctatcctcgagagcttagtaaaattagctgaaaacaacttatggacatgtcata 46415790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 498
Target Start/End: Complemental strand, 51044596 - 51044544
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaact 498  Q
    ||||| ||||||||||||| ||| || |||||| |||||||||||||||||||    
T  51044596 aagtgtttatgtataagctatttctataacaaaagataaaataaagtcaaact 51044544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 494
Target Start/End: Complemental strand, 51556004 - 51555956
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaac-aaagataaaataaagtca 494  Q
    ||||||||||||||||||| || ||| ||| ||||||||||||||||||    
T  51556004 aagtgcttatgtataagctattattataacaaaagataaaataaagtca 51555956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 532
Target Start/End: Original strand, 52734785 - 52734829
Alignment:
Q  488 aaagtcaaactactttcatataagcttttttcataagctaacatg 532  Q
    ||||||||| |||||||||||||| | ||||||||||||| ||||    
T  52734785 aaagtcaaattactttcatataagttgttttcataagctatcatg 52734829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 447 - 513
Target Start/End: Complemental strand, 32059725 - 32059659
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaagataaaataaagtcaaactactttcatataagct 513  Q
    |||||||||||||||||||||||||  ||| |||||||||||||||||||||  |||||||||||||    
T  32059725 aagtgcttatgtataagctgtttttgtaactaagataaaataaagtcaaactgttttcatataagct 32059659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 495
Target Start/End: Complemental strand, 20982326 - 20982223
Alignment:
Q  389 cctgtttggataaacaatttcattaagcgcttatagcataa-cgcttatcatacaatacaagtgcttatgtataagctgtttttacaacaaa-gataaaa 486  Q
    ||||||||||||||||| ||||||||| |||||||||||||  |||||||     ||| ||||||||||||||||||| ||| || |||||| |||||||    
T  20982326 cctgtttggataaacaacttcattaagtgcttatagcataagtgcttatc-----atataagtgcttatgtataagctatttctataacaaaggataaaa 20982232  T
Q  487 taaagtcaa 495  Q
    |||||||||    
T  20982231 taaagtcaa 20982223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 447 - 565
Target Start/End: Original strand, 11684356 - 11684473
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaagataaaataaagtcaaactactttcatataagcttttttcataagctaacatgtagagcttaatgaa 546  Q
    ||||||| ||||||||||| |||||| |||||| ||| || | ||| |||||  ||||||||||||| |||||||||||||   || ||||||||  |||    
T  11684356 aagtgctaatgtataagctatttttataacaaa-atataaaatagtgaaactgttttcatataagctattttcataagctatgctggagagcttacggaa 11684454  T
Q  547 ataagctgaaaacagctta 565  Q
    ||||| |||||||||||||    
T  11684455 ataagttgaaaacagctta 11684473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 391 - 581
Target Start/End: Original strand, 32172534 - 32172728
Alignment:
Q  391 tgtttggataaacaatttcattaagcgcttatagcataa-cgcttatcatacaatacaagtgcttatgtataagctgtttttacaacaaa-gataaaata 488  Q
    |||||||||||||||  | |||||||||||| ||||||| |||||||||||||| |     |||||||||||| || ||| ||||||||| ||||||||     
T  32172534 tgtttggataaacaacataattaagcgcttacagcataagcgcttatcatacaaga-----gcttatgtataaactatttctacaacaaaagataaaatg 32172628  T
Q  489 aagtcaaactactttcatataagcttt-------tttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||  |  || |||||||||| |       |||||||||||| |||| ||| || |  |||||||||||||||  ||||||||| |||||||||||    
T  32172629 aagtcaagttgtttacatataagctataagctgttttcataagctatcatgaagaactaatggaaataagctgaaaatggcttatggacatgtcataagt 32172728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 392 - 490
Target Start/End: Original strand, 26516180 - 26516275
Alignment:
Q  392 gtttggataaacaatttcattaagcgcttatagcataa-cgcttatcatacaatacaagtgcttatgtataagctgtttttacaac-aaagataaaataa 489  Q
    |||||||||||||| || |||||||||||||||||||| ||||||||||| ||     ||||||||||||||||| ||| || ||| |||||||||||||    
T  26516180 gtttggataaacaacttaattaagcgcttatagcataagcgcttatcatataa-----gtgcttatgtataagctatttctaaaacaaaagataaaataa 26516274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 458 - 567
Target Start/End: Original strand, 11615452 - 11615562
Alignment:
Q  458 tataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagcttttttcataagctaacatgtagagcttaatgaaataagctgaa 556  Q
    |||||||| |||||| |||||| ||||||||||||||||| |  || | |||||||| |||||||||| || | |   |||||||  |||||||||||||    
T  11615452 tataagctatttttataacaaaagataaaataaagtcaaattgtttacgtataagctgttttcataagatatccttatgagcttatggaaataagctgaa 11615551  T
Q  557 aacagcttatg 567  Q
    |||||||||||    
T  11615552 aacagcttatg 11615562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 443 - 507
Target Start/End: Complemental strand, 7096268 - 7096203
Alignment:
Q  443 atacaagtgcttatgtataagctgtttttacaac-aaagataaaataaagtcaaactactttcata 507  Q
    ||||||||||||||||||||||| ||| || ||| ||||||||||||||||||||| | |||||||    
T  7096268 atacaagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaaccattttcata 7096203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 566
Target Start/End: Original strand, 32197700 - 32197780
Alignment:
Q  486 ataaagtcaaactactttcatataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttat 566  Q
    |||||||||||||| ||||||||||||| ||| ||||||||| | || ||| ||||   ||||||| ||||||||||||||    
T  32197700 ataaagtcaaactattttcatataagctgtttccataagctatcctgaagaacttatgaaaataagatgaaaacagcttat 32197780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 477 - 513
Target Start/End: Complemental strand, 39823227 - 39823191
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagct 513  Q
    |||||||||||||||||||||||||||||||||||||    
T  39823227 aaagataaaataaagtcaaactactttcatataagct 39823191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 505 - 580
Target Start/End: Complemental strand, 18543267 - 18543193
Alignment:
Q  505 atataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    ||||||| | ||||||||||||| | || |||||||| |||||||||||||||||| || ||||| ||||||||||    
T  18543267 atataagttgttttcataagctatcctggagagctta-tgaaataagctgaaaacaactcatggacatgtcataag 18543193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 447 - 513
Target Start/End: Complemental strand, 35135799 - 35135732
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagct 513  Q
    ||||| ||||||||||| | ||| || |||||| |||||||||||||||||||| |||||||||||||    
T  35135799 aagtgtttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagct 35135732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 450 - 511
Target Start/End: Complemental strand, 37063208 - 37063146
Alignment:
Q  450 tgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataag 511  Q
    ||||||||||||| || ||| || |||||| |||||||||||||||||||| |||||||||||    
T  37063208 tgcttatgtataaactatttctataacaaaagataaaataaagtcaaactattttcatataag 37063146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 507 - 580
Target Start/End: Complemental strand, 17258952 - 17258879
Alignment:
Q  507 ataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    ||||||| ||||||||| ||| | || ||||||||   ||||||||||||||||||||||| | ||||||||||    
T  17258952 ataagctgttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataag 17258879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 391 - 494
Target Start/End: Complemental strand, 29115402 - 29115302
Alignment:
Q  391 tgtttggataaacaatttcattaagcgcttatagcataa-cgcttatcatacaatacaagtgcttatgtataagctgtttttacaac-aaagataaaata 488  Q
    |||||||||||||| ||| |||| ||||||||||||||| |  |||||||| ||     ||||||||||||||||| ||| |||||| |||| |||||||    
T  29115402 tgtttggataaacactttaattacgcgcttatagcataaacatttatcataaaa-----gtgcttatgtataagctatttctacaacaaaaggtaaaata 29115308  T
Q  489 aagtca 494  Q
    ||||||    
T  29115307 aagtca 29115302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 515 - 580
Target Start/End: Complemental strand, 40205135 - 40205070
Alignment:
Q  515 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    ||||||||||||| | || ||||||||  |||||||||||||||||| ||||||| |||| |||||    
T  40205135 ttttcataagctatcctggagagcttatagaaataagctgaaaacagattatggacatgttataag 40205070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 479 - 511
Target Start/End: Original strand, 26516366 - 26516398
Alignment:
Q  479 agataaaataaagtcaaactactttcatataag 511  Q
    |||||||||||||||||||||||||||||||||    
T  26516366 agataaaataaagtcaaactactttcatataag 26516398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 545 - 581
Target Start/End: Complemental strand, 32194110 - 32194074
Alignment:
Q  545 aaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||||||||||| ||||||||||||||||||||    
T  32194110 aaataagctgaaaacaacttatggaaatgtcataagt 32194074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 513
Target Start/End: Original strand, 19177412 - 19177479
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaaca-aagataaaataaagtcaaactactttcatataagct 513  Q
    |||||||||||||||| || ||| ||||||| |||||||||| ||||| ||||  |||||||||||||    
T  19177412 aagtgcttatgtataaactatttctacaacagaagataaaattaagtctaactgttttcatataagct 19177479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 579
Target Start/End: Complemental strand, 5284518 - 5284445
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaa-taagctgaaaacagcttatggaaatgtcataa 579  Q
    |||||| | |||||||| |||| |||| |||||| ||||||| ||||||||||| |||||||||| |||||||||    
T  5284518 tataagttgttttcataggctatcatgaagagct-aatgaaaataagctgaaaaaagcttatggacatgtcataa 5284445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 568
Target Start/End: Complemental strand, 16945053 - 16944991
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatgg 568  Q
    |||||||| ||||||| | ||| | || |||||||||  ||||||||||||||||||||||||    
T  16945053 tataagctattttcattaactatcctgaagagcttaagtaaataagctgaaaacagcttatgg 16944991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 534 - 580
Target Start/End: Complemental strand, 28586808 - 28586762
Alignment:
Q  534 agagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    ||||||||  |||||||||||||||||||||| ||| ||||||||||    
T  28586808 agagcttatcgaaataagctgaaaacagcttacggatatgtcataag 28586762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 515 - 581
Target Start/End: Complemental strand, 37611276 - 37611210
Alignment:
Q  515 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||||||||||| | || ||||||||  ||||||| |||||||||||||||| | |||||| ||||    
T  37611276 ttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagt 37611210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 515 - 581
Target Start/End: Complemental strand, 37788006 - 37787940
Alignment:
Q  515 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||||||||||| | || ||||||||  ||||||| |||||||||||||||| | |||||| ||||    
T  37788006 ttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagt 37787940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 429
Target Start/End: Complemental strand, 39257575 - 39257537
Alignment:
Q  391 tgtttggataaacaatttcattaagcgcttatagcataa 429  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  39257575 tgtttggataaacaacttaattaagcgcttatagcataa 39257537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 511
Target Start/End: Original strand, 39750107 - 39750141
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataag 511  Q
    ||||||||||||||||||||||| |||||||||||    
T  39750107 aaagataaaataaagtcaaactattttcatataag 39750141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 2468318 - 2468367
Alignment:
Q  391 tgtttggataaacaatttcattaagcgcttatagcataacgcttatcata 440  Q
    |||||||||| ||| ||| |||||||||||||||||||| ||| ||||||    
T  2468318 tgtttggatatacactttaattaagcgcttatagcataatgctcatcata 2468367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 567
Target Start/End: Original strand, 7984969 - 7985030
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatg 567  Q
    |||||||||||||||||||||| | || |||  |||   |||||||||||||||||||||||    
T  7984969 tataagcttttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatg 7985030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 579
Target Start/End: Original strand, 11707055 - 11707128
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataa 579  Q
    |||||||| ||||||||||||| | ||||||||||    |||||||||||||||| |||||  | |||||||||    
T  11707055 tataagctgttttcataagctatcttgtagagcttttgaaaataagctgaaaacaacttataaacatgtcataa 11707128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 567
Target Start/End: Complemental strand, 4014493 - 4014433
Alignment:
Q  507 ataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatg 567  Q
    ||||||| ||||||||||||| | || ||| ||||   |||||||||||||||||||||||    
T  4014493 ataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatg 4014433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 389 - 429
Target Start/End: Original strand, 6725116 - 6725156
Alignment:
Q  389 cctgtttggataaacaatttcattaagcgcttatagcataa 429  Q
    |||||||||||||| ||||| |||||| |||||||||||||    
T  6725116 cctgtttggataaataatttaattaagtgcttatagcataa 6725156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 545 - 581
Target Start/End: Complemental strand, 11700409 - 11700373
Alignment:
Q  545 aaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||| |||||||||||||||||| |||||||||||    
T  11700409 aaataatctgaaaacagcttatggacatgtcataagt 11700373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 513
Target Start/End: Original strand, 14295470 - 14295506
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagct 513  Q
    ||||||||||||||||||||||  |||||||||||||    
T  14295470 aaagataaaataaagtcaaactgttttcatataagct 14295506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 391 - 438
Target Start/End: Original strand, 41052771 - 41052819
Alignment:
Q  391 tgtttggataaacaatttcattaagcgcttatagcat-aacgcttatca 438  Q
    |||||||||||||||||| |||||| |||| |||||| |||||||||||    
T  41052771 tgtttggataaacaatttaattaagtgcttgtagcataaacgcttatca 41052819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 6e-17; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 447 - 566
Target Start/End: Original strand, 27792805 - 27792932
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagc-------ttttttcataagctaacatgtagagc 538  Q
    ||||||||||||||||||| |||  | |||||| |||||||||| ||||||||| ||||||||||||       | ||||||||| ||| ||||||||||    
T  27792805 aagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataagctgcaagttgttttcataaactatcatgtagagc 27792904  T
Q  539 ttaatgaaataagctgaaaacagcttat 566  Q
    |||  ||||||||||||||||| |||||    
T  27792905 ttatagaaataagctgaaaacaacttat 27792932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 452 - 578
Target Start/End: Original strand, 20669117 - 20669244
Alignment:
Q  452 cttatgtataagctgtttttacaacaa-agataaaataaagtcaaactactttcatataagcttttttcataagctaacatgtagagcttaatgaaataa 550  Q
    |||||||||||||| ||| || ||||| | ||| |||||||||||| |  | ||||||||||| ||||||||||||| | || ||||||||   ||||||    
T  20669117 cttatgtataagctatttctataacaagatatacaataaagtcaaaatgttgtcatataagctgttttcataagctatcttggagagcttatgtaaataa 20669216  T
Q  551 gctgaaaacagcttatggaaatgtcata 578  Q
    || |||||||||||||| | ||||||||    
T  20669217 gcggaaaacagcttatgaacatgtcata 20669244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 505 - 575
Target Start/End: Complemental strand, 41644516 - 41644446
Alignment:
Q  505 atataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtc 575  Q
    ||||||||| ||||||||||||| | |  ||| ||||| |||||||||||||||||||||||| |||||||    
T  41644516 atataagctgttttcataagctatcgtagagatcttaaggaaataagctgaaaacagcttatgaaaatgtc 41644446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 512 - 581
Target Start/End: Original strand, 21574496 - 21574565
Alignment:
Q  512 cttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||||| ||||||||||||| ||||||||  |||||||||| ||| ||||||||| | |||||||||||    
T  21574496 ctttttttataagctaacatggagagcttatggaaataagctaaaagcagcttatgaacatgtcataagt 21574565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 527
Target Start/End: Complemental strand, 25459760 - 25459681
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaagataaaataaagtcaaactactttcatataagcttttttcataagcta 527  Q
    |||||||| ||||||| || || ||| ||||||||||| ||||||  |||||| ||||||||||| |||||||||||||||    
T  25459760 aagtgcttttgtataaactattgttataacaaagataatataaagataaactattttcatataag-ttttttcataagcta 25459681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 450 - 513
Target Start/End: Original strand, 28779292 - 28779356
Alignment:
Q  450 tgcttatgtataagctgtttttacaacaa-agataaaataaagtcaaactactttcatataagct 513  Q
    ||||| ||||||||||||||||| ||||  |||| |||||||||||||||| |||||||||||||    
T  28779292 tgcttttgtataagctgtttttataacatcagatgaaataaagtcaaactattttcatataagct 28779356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 447 - 513
Target Start/End: Original strand, 1395604 - 1395671
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagct 513  Q
    |||||| |||||||||||| ||| || |||||| ||||||||||||||||| || |||||||||||||    
T  1395604 aagtgcatatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataagct 1395671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 443 - 513
Target Start/End: Complemental strand, 8007836 - 8007765
Alignment:
Q  443 atacaagtgcttatgtataagctgtttttacaac-aaagataaaataaagtcaaactactttcatataagct 513  Q
    ||||||| ||||||||||||||||||| || ||| ||||||||| ||||||||||||  | |||||||||||    
T  8007836 atacaagggcttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagct 8007765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 447 - 507
Target Start/End: Complemental strand, 16790493 - 16790432
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaa-agataaaataaagtcaaactactttcata 507  Q
    ||||||||||||||||||| |||||| ||||| |||||||||||| ||||| || |||||||    
T  16790493 aagtgcttatgtataagctatttttataacaacagataaaataaaatcaaattattttcata 16790432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 520 - 581
Target Start/End: Original strand, 36200110 - 36200171
Alignment:
Q  520 ataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||| | ||||||||| |  ||||||||||||||||| |||||||| |||||||||||    
T  36200110 ataagctatcctgtagagctcatggaaataagctgaaaacaacttatggacatgtcataagt 36200171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 505 - 581
Target Start/End: Original strand, 1816582 - 1816658
Alignment:
Q  505 atataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||||| | |||||||||||||   || ||||||||   |||||||||||||||||| |||| |||||||||||||    
T  1816582 atataagttgttttcataagctatactggagagcttatcaaaataagctgaaaacagcctatgaaaatgtcataagt 1816658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 506 - 581
Target Start/End: Complemental strand, 3015913 - 3015838
Alignment:
Q  506 tataagcttttttcataagctaa-catgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||| |||||| ||||||| |||| |||||||| | ||||||| |||||||| |||||||| |||||||||||    
T  3015913 tataagctgttttcaaaagctaatcatg-agagcttattaaaataagatgaaaacatcttatggacatgtcataagt 3015838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 510
Target Start/End: Complemental strand, 20192743 - 20192679
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataa 510  Q
    ||||||||||||||||||| ||| || |||||| ||||||||||||||||||   ||||||||||    
T  20192743 aagtgcttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataa 20192679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 509 - 581
Target Start/End: Original strand, 31010405 - 31010477
Alignment:
Q  509 aagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||| ||||| ||| ||| |||  ||||||||  ||| |||||||||||||||||||||| |||||||||||    
T  31010405 aagctgttttcgtaacctatcatagagagcttatggaattaagctgaaaacagcttatggacatgtcataagt 31010477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 569
Target Start/End: Original strand, 237397 - 237460
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatgga 569  Q
    |||||| | |||||||||| || | | |||||||||  ||||||||||||||||||||||||||    
T  237397 tataagttgttttcataagttatcctatagagcttacggaaataagctgaaaacagcttatgga 237460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 515 - 566
Target Start/End: Complemental strand, 9279387 - 9279336
Alignment:
Q  515 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttat 566  Q
    ||||||||| ||| |||| |||| |||| |||||||||||||||||||||||    
T  9279387 ttttcataaactatcatgaagagtttaaggaaataagctgaaaacagcttat 9279336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 450 - 511
Target Start/End: Original strand, 22232762 - 22232824
Alignment:
Q  450 tgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataag 511  Q
    |||| ||||||||||| ||| || |||||| |||||||||||||||||||  |||||||||||    
T  22232762 tgctcatgtataagctatttatataacaaatgataaaataaagtcaaactgttttcatataag 22232824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 566
Target Start/End: Original strand, 23793552 - 23793644
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagc---ttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttat 566  Q
    |||||||||||||||||||| |  ||||||||||||   |  |||||||||||| | || | ||||||  ||||||||||||||||| |||||    
T  23793552 aaagataaaataaagtcaaaatgatttcatataagcaattggtttcataagctatcttggaaagcttatagaaataagctgaaaacaacttat 23793644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 507
Target Start/End: Complemental strand, 33434113 - 33434083
Alignment:
Q  477 aaagataaaataaagtcaaactactttcata 507  Q
    |||||||||||||||||||||||||||||||    
T  33434113 aaagataaaataaagtcaaactactttcata 33434083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 515 - 581
Target Start/End: Original strand, 37273143 - 37273209
Alignment:
Q  515 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||||||||||| | || ||| ||||  |||||||| |||||||| |||||||| |||||||||||    
T  37273143 ttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagt 37273209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 515 - 569
Target Start/End: Complemental strand, 44284141 - 44284087
Alignment:
Q  515 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatgga 569  Q
    ||||||||||||| | || ||||||||  ||||||||||||||| ||||||||||    
T  44284141 ttttcataagctatcctggagagcttatagaaataagctgaaaatagcttatgga 44284087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 523
Target Start/End: Complemental strand, 53736219 - 53736173
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagcttttttcataa 523  Q
    ||||||||||||| ||||||||| ||||||||||| | |||||||||    
T  53736219 aaagataaaataatgtcaaactattttcatataagttgttttcataa 53736173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 507
Target Start/End: Original strand, 3757981 - 3758042
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaac-aaagataaaataaagtcaaactactttcata 507  Q
    ||||||||||||||||||| |||||  ||| ||| ||||||||||||||||||  |||||||    
T  3757981 aagtgcttatgtataagctatttttgtaacaaaatataaaataaagtcaaactcttttcata 3758042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 579
Target Start/End: Complemental strand, 13709893 - 13709820
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataa 579  Q
    ||||| || ||||||||||||| | || |||| ||| |||||||| ||||||||| ||||||||  ||||||||    
T  13709893 tataatctgttttcataagctatcctggagagtttattgaaataaactgaaaacaacttatggacttgtcataa 13709820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 567
Target Start/End: Original strand, 27294346 - 27294407
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatg 567  Q
    |||||||| ||||||||| ||  |||||||| | ||| |||||||| |||||||||||||||    
T  27294346 tataagctgttttcataaactgtcatgtagatcataaggaaataagatgaaaacagcttatg 27294407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 526
Target Start/End: Original strand, 42808923 - 42808992
Alignment:
Q  458 tataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagcttttttcataagct 526  Q
    |||||||||||| || |||||| ||||||||||||| ||| |  ||| ||||||||| ||||||||||||    
T  42808923 tataagctgtttctataacaaaagataaaataaagttaaattgtttttatataagctgttttcataagct 42808992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 515 - 568
Target Start/End: Original strand, 43948664 - 43948717
Alignment:
Q  515 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatgg 568  Q
    ||||||||||||| | || | ||||| | |||||||||||||||||||||||||    
T  43948664 ttttcataagctatcttggaaagcttgaggaaataagctgaaaacagcttatgg 43948717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 577
Target Start/End: Complemental strand, 48049014 - 48048981
Alignment:
Q  544 gaaataagctgaaaacagcttatggaaatgtcat 577  Q
    |||||||||||||||||||||||||| |||||||    
T  48049014 gaaataagctgaaaacagcttatggacatgtcat 48048981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 575
Target Start/End: Complemental strand, 48286880 - 48286811
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtc 575  Q
    ||||| || |||||||||| || |||||||||||||  |||||||||||| ||| | ||||||| |||||    
T  48286880 tataaactgttttcataagttatcatgtagagcttatagaaataagctgataacggtttatggacatgtc 48286811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 581
Target Start/End: Original strand, 50004682 - 50004727
Alignment:
Q  536 agcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||| ||||||||||||||||||||||| | | |||||||||||    
T  50004682 agcttattgaaataagctgaaaacagcttaagaacatgtcataagt 50004727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 507
Target Start/End: Complemental strand, 52413258 - 52413197
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaac-aaagataaaataaagtcaaactactttcata 507  Q
    ||||||||||||||||||| |||||| ||| ||||||| |||||| | |||||| |||||||    
T  52413258 aagtgcttatgtataagctatttttataacaaaagatagaataaaatgaaactattttcata 52413197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 515 - 580
Target Start/End: Complemental strand, 54180841 - 54180776
Alignment:
Q  515 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    |||||||||||||  ||| ||||||||   ||||||||| |||||| |||||||| ||||||||||    
T  54180841 ttttcataagctattatggagagcttatataaataagctaaaaacaacttatggacatgtcataag 54180776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 513
Target Start/End: Complemental strand, 12923431 - 12923395
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagct 513  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  12923431 aaagataaaataaagtcaaactgctttcttataagct 12923395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 545 - 581
Target Start/End: Original strand, 13804816 - 13804852
Alignment:
Q  545 aaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  13804816 aaataagttgaaaacagcttatggacatgtcataagt 13804852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 576
Target Start/End: Complemental strand, 22214691 - 22214659
Alignment:
Q  544 gaaataagctgaaaacagcttatggaaatgtca 576  Q
    |||||||||||||||||||||||||| ||||||    
T  22214691 gaaataagctgaaaacagcttatggacatgtca 22214659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 580
Target Start/End: Complemental strand, 27290933 - 27290897
Alignment:
Q  544 gaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    |||||||||||||||||||||||||  ||||||||||    
T  27290933 gaaataagctgaaaacagcttatgggcatgtcataag 27290897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 580
Target Start/End: Complemental strand, 30923930 - 30923894
Alignment:
Q  544 gaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    ||||||||||||||||||||||| || ||||||||||    
T  30923930 gaaataagctgaaaacagcttatagacatgtcataag 30923894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 389 - 429
Target Start/End: Complemental strand, 37308256 - 37308216
Alignment:
Q  389 cctgtttggataaacaatttcattaagcgcttatagcataa 429  Q
    ||||||||||||||||| || |||||| |||||||||||||    
T  37308256 cctgtttggataaacaacttaattaagtgcttatagcataa 37308216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 545 - 581
Target Start/End: Original strand, 41724251 - 41724287
Alignment:
Q  545 aaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||||||||||| |||||||| |||||||||||    
T  41724251 aaataagctgaaaacaacttatggacatgtcataagt 41724287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 531 - 579
Target Start/End: Complemental strand, 45432984 - 45432936
Alignment:
Q  531 tgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataa 579  Q
    |||||||||||  ||||||||||||||||| |||||| | |||||||||    
T  45432984 tgtagagcttatggaaataagctgaaaacaacttatgaacatgtcataa 45432936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 513
Target Start/End: Complemental strand, 49587022 - 49586986
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagct 513  Q
    ||||||||||||||||||||||  |||||||||||||    
T  49587022 aaagataaaataaagtcaaactgttttcatataagct 49586986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 9e-16; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 477 - 580
Target Start/End: Complemental strand, 18749916 - 18749813
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtca 576  Q
    ||||||||| ||||||||||||| ||| ||||||||| ||||||||||||| || | | | ||||  |||||||||||||||| ||||||| | |||||     
T  18749916 aaagataaagtaaagtcaaactatttttatataagctgttttcataagctatcacggaaaacttatggaaataagctgaaaactgcttatgaacatgtcg 18749817  T
Q  577 taag 580  Q
    ||||    
T  18749816 taag 18749813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 581
Target Start/End: Original strand, 39360007 - 39360098
Alignment:
Q  490 agtcaaactactttcatataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||||  ||||||||||| | |||||| |||||| | ||  ||||||| ||||||||||||||| || |||||||| |||||||||||    
T  39360007 agtcaaactgttttcatataagatgttttcaaaagctatcctggcgagcttattgaaataagctgaaagcaacttatggatatgtcataagt 39360098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 447 - 580
Target Start/End: Complemental strand, 26935687 - 26935553
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagcttttttcataagctaacatgtagagcttaatga 545  Q
    |||||||| ||| |||||| |||||| |||||| |||||||||| || ||| |  |||||||| |||| ||||||||| |||   |  ||||||||  ||    
T  26935687 aagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaagagcttatgga 26935588  T
Q  546 aataagctgaaaacagcttatggaaatgtcataag 580  Q
    |||||||||||||||||||||| | || |||||||    
T  26935587 aataagctgaaaacagcttatgaatatttcataag 26935553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 503 - 567
Target Start/End: Complemental strand, 12792571 - 12792507
Alignment:
Q  503 tcatataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatg 567  Q
    ||||||||||| ||||||||||||| | || |||||||| ||||||||||||| ||||| |||||    
T  12792571 tcatataagctattttcataagctatcttgaagagcttattgaaataagctgataacagtttatg 12792507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 495
Target Start/End: Original strand, 30133932 - 30134031
Alignment:
Q  391 tgtttggataaacaatttcattaagcgcttatagcataa-cgcttatcatacaatacaagtgcttatgtataagctgtttttacaac-aaagataaaata 488  Q
    ||||||||||||||| |  |||||  ||||||||||||| |||||||||||       |||| ||||||||||||| |||||||||| ||||||||||||    
T  30133932 tgtttggataaacaactcaattaaatgcttatagcataagcgcttatcata-------agtgtttatgtataagctatttttacaacaaaagataaaata 30134024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 511
Target Start/End: Original strand, 31341073 - 31341192
Alignment:
Q  389 cctgtttggataaacaatttcattaagcgcttatagcataa-cgcttatcatacaatacaagtgcttatgtataagctgtttttacaacaaa-gataaaa 486  Q
    ||||||||||||||||| || || |||||||||| |||||| ||||||||||  ||      |||||||||||||||| ||| || |||||| |||||||    
T  31341073 cctgtttggataaacaacttaatcaagcgcttattgcataagcgcttatcatctaaa-----tgcttatgtataagctatttgtataacaaaagataaaa 31341167  T
Q  487 taaagtcaaactactttcatataag 511  Q
    ||||||||||||  ||| |||||||    
T  31341168 taaagtcaaactggttttatataag 31341192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 447 - 515
Target Start/End: Original strand, 33894556 - 33894624
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaac-aaagataaaataaagtcaaactactttcatataagcttt 515  Q
    ||||||||||||||||||| ||| || ||| ||||||||||| ||||||||||  |||||||||||||||    
T  33894556 aagtgcttatgtataagctatttctataacaaaagataaaat-aagtcaaactgttttcatataagcttt 33894624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 490 - 579
Target Start/End: Original strand, 39345455 - 39345544
Alignment:
Q  490 agtcaaactactttcatataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataa 579  Q
    |||||||||  ||||||||||||| |||||| |||||| | ||  || ||||  |||||||||||||| || |||||||| |||||||||    
T  39345455 agtcaaactgttttcatataagctgttttcaaaagctatcctgacgaccttatggaaataagctgaaagcaacttatggacatgtcataa 39345544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 506 - 582
Target Start/End: Original strand, 4966156 - 4966232
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagtg 582  Q
    |||||||| ||||||||||| | | || ||||||||  ||||||| ||||||||| |||||||| || |||||||||    
T  4966156 tataagctgttttcataagccatcctgaagagcttatggaaataaactgaaaacaacttatggacatatcataagtg 4966232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 545 - 581
Target Start/End: Complemental strand, 39539812 - 39539776
Alignment:
Q  545 aaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||||||||||||||||||||||| |||||||||||    
T  39539812 aaataagctgaaaacagcttatggacatgtcataagt 39539776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 497
Target Start/End: Original strand, 5276157 - 5276208
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaac-aaagataaaataaagtcaaac 497  Q
    ||||||||||||||||||| |||||| ||| |||||||| ||||||||||||    
T  5276157 aagtgcttatgtataagctatttttataacaaaagataacataaagtcaaac 5276208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 508 - 579
Target Start/End: Complemental strand, 9423662 - 9423591
Alignment:
Q  508 taagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataa 579  Q
    |||||| |||| |||||||| | || |||||||  |||||||||||||||||| |||||| | |||||||||    
T  9423662 taagctgttttaataagctatcctggagagcttcttgaaataagctgaaaacaacttatgaacatgtcataa 9423591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 534 - 581
Target Start/End: Complemental strand, 12234931 - 12234884
Alignment:
Q  534 agagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||||||  ||||||||||||||||||||||| || |||||||||||    
T  12234931 agagcttatggaaataagctgaaaacagcttatagacatgtcataagt 12234884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 474 - 576
Target Start/End: Complemental strand, 24363710 - 24363601
Alignment:
Q  474 aacaaagataaaataaagtcaaactactttcata-------taagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttat 566  Q
    ||||||||||||||| |||||| ||| |||||||       |||| | ||||||||||||| | || |||| |||  ||||||||||||||||| |||||    
T  24363710 aacaaagataaaatagagtcaatctattttcatacaggttataagttgttttcataagctatcctggagaggttatggaaataagctgaaaacaacttat 24363611  T
Q  567 ggaaatgtca 576  Q
    ||| ||||||    
T  24363610 ggacatgtca 24363601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 513
Target Start/End: Original strand, 31002694 - 31002761
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagct 513  Q
    |||||||||||||||| || |||  || ||||| ||||||||||||||||| || |||||||||||||    
T  31002694 aagtgcttatgtataaactatttcaaccacaaaagataaaataaagtcaaaatattttcatataagct 31002761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 429
Target Start/End: Complemental strand, 5010657 - 5010619
Alignment:
Q  391 tgtttggataaacaatttcattaagcgcttatagcataa 429  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  5010657 tgtttggataaacaatttatttaagcgcttatagcataa 5010619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 580
Target Start/End: Complemental strand, 6552362 - 6552288
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    ||||| || ||||||||| ||| |||| |||| |||   ||||||||||||||||||||||| | ||||||||||    
T  6552362 tataaactattttcataaactatcatgcagagtttatgaaaataagctgaaaacagcttatgaatatgtcataag 6552288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Complemental strand, 27496439 - 27496401
Alignment:
Q  544 gaaataagctgaaaacagcttatggaaatgtcataagtg 582  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  27496439 gaaataagctgaaaacagcttatggacatgtcatgagtg 27496401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 582
Target Start/End: Complemental strand, 27503097 - 27503059
Alignment:
Q  544 gaaataagctgaaaacagcttatggaaatgtcataagtg 582  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  27503097 gaaataagctgaaaacagcttatggacatgtcatgagtg 27503059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 27517888 - 27517851
Alignment:
Q  544 gaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  27517888 gaaataagctgaaaactgcttatggacatgtcataagt 27517851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 511
Target Start/End: Original strand, 35536044 - 35536105
Alignment:
Q  451 gcttatgtataagctgtttttacaaca-aagataaaataaagtcaaactactttcatataag 511  Q
    ||||||||||||||| ||| || |||| ||||||||||||||||||| |  |||||||||||    
T  35536044 gcttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataag 35536105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 580
Target Start/End: Complemental strand, 36598389 - 36598352
Alignment:
Q  543 tgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  36598389 tgaaataagctgaaaacagcttatgaacatgtcataag 36598352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 579
Target Start/End: Complemental strand, 44151550 - 44151477
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataa 579  Q
    |||||| | ||||||||| ||| | || | ||||||  ||||||||||||||||| |||||||| |||||||||    
T  44151550 tataagttgttttcataaactatcttgaaaagcttatggaaataagctgaaaacatcttatggacatgtcataa 44151477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Original strand, 45078316 - 45078353
Alignment:
Q  544 gaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  45078316 gaaataagttgaaaacagcttatggacatgtcataagt 45078353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 48157152 - 48157115
Alignment:
Q  544 gaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  48157152 gaaataagctgaaaacagcttatggacatggcataagt 48157115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 498
Target Start/End: Complemental strand, 3610877 - 3610825
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaac-aaagataaaataaagtcaaact 498  Q
    ||||||||||||||||||| ||| |||||| ||||||||||| ||| ||||||    
T  3610877 aagtgcttatgtataagctatttctacaacaaaagataaaatgaaggcaaact 3610825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 491
Target Start/End: Original strand, 7274394 - 7274438
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaagataaaataaag 491  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  7274394 aagtgcttatatataaactatttctacaacaaagataaaataaag 7274438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 545 - 581
Target Start/End: Original strand, 44808197 - 44808233
Alignment:
Q  545 aaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  44808197 aaataagctgaaaacaggttatggacatgtcataagt 44808233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 477 - 567
Target Start/End: Original strand, 11494117 - 11494207
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatg 567  Q
    |||||||| |||||||||||||  |||||||||| || ||||||||||||| | || ||||||||   ||||||||||||| |||||||||    
T  11494117 aaagataacataaagtcaaacttttttcatataaactattttcataagctatcttgaagagcttatgaaaataagctgaaagcagcttatg 11494207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 477 - 558
Target Start/End: Complemental strand, 6875366 - 6875285
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaa 558  Q
    ||||| ||||||||||||||||| ||||||||||| | |||||||| |||| | || ||||||||| |||||||| ||||||    
T  6875366 aaagacaaaataaagtcaaactattttcatataagttattttcatatgctatcttggagagcttaaggaaataagttgaaaa 6875285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 506 - 580
Target Start/End: Original strand, 11795092 - 11795166
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    ||||||||  ||||||||||||  ||| ||||||||  |||||||||||||||||| ||||||| ||||||||||    
T  11795092 tataagctgatttcataagctattatggagagcttatggaaataagctgaaaacaggttatggacatgtcataag 11795166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 534 - 581
Target Start/End: Complemental strand, 4055658 - 4055611
Alignment:
Q  534 agagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||||||    
T  4055658 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagt 4055611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 506 - 581
Target Start/End: Original strand, 11183545 - 11183620
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||| |||||| |||||| | || ||||||||  ||||||||||||||||||||||| || || ||||||||    
T  11183545 tataagctgttttcacaagctaccctggagagcttatggaaataagctgaaaacagcttatagacatatcataagt 11183620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 580
Target Start/End: Original strand, 10383885 - 10383959
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    |||| ||| ||||| ||| ||| ||| |||||||||  ||||||||||| |||||||||||| ||||||||||||    
T  10383885 tatatgctgttttcgtaaactatcatatagagcttatggaaataagctgtaaacagcttatgaaaatgtcataag 10383959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 515 - 581
Target Start/End: Original strand, 14949875 - 14949941
Alignment:
Q  515 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||||||||||| | |  |||| |||  |||||||||||||||||||||||||| |||||||||||    
T  14949875 ttttcataagctatcctaaagagattatagaaataagctgaaaacagcttatggacatgtcataagt 14949941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 515 - 581
Target Start/End: Complemental strand, 25869327 - 25869261
Alignment:
Q  515 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||| |||| |||| |||| |||  ||||||||||||||||| |||||||| |||||||||||    
T  25869327 ttttcataggctatcatggagagtttatggaaataagctgaaaacaacttatggacatgtcataagt 25869261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 506 - 579
Target Start/End: Complemental strand, 11813175 - 11813102
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataa 579  Q
    ||||| || ||||||||||||| | |  ||||||||  ||||||||||||||||||| |||||| |||||||||    
T  11813175 tataatctgttttcataagctatcttcaagagcttacagaaataagctgaaaacagcctatggatatgtcataa 11813102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 451 - 527
Target Start/End: Original strand, 26215433 - 26215510
Alignment:
Q  451 gcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagcttttttcataagcta 527  Q
    ||||||||||||||| ||| || |||||| ||||||||||||| |||||| |||| |||||  | |||||||||||||    
T  26215433 gcttatgtataagctatttctataacaaaagataaaataaagttaaactattttcgtataatatgttttcataagcta 26215510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 35453760 - 35453695
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataag 511  Q
    |||| ||||| ||||| |||||| ||||||||| ||||||||||||| |||||| |||||||||||    
T  35453760 aagtacttatatataatctgtttctacaacaaaagataaaataaagttaaactagtttcatataag 35453695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 477 - 513
Target Start/End: Complemental strand, 1470962 - 1470926
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagct 513  Q
    |||||||||||||||||||| ||||||||||||||||    
T  1470962 aaagataaaataaagtcaaattactttcatataagct 1470926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 580
Target Start/End: Complemental strand, 11569529 - 11569453
Alignment:
Q  504 catataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    |||||||||| ||||||||||||| |||| |||| ||    |||||||||||||||| |||||| | ||||||||||    
T  11569529 catataagctgttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataag 11569453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 561
Target Start/End: Original strand, 7645978 - 7646033
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacag 561  Q
    |||||| | ||||||||||||||| |||| ||||||  ||||||||||||||||||    
T  7645978 tataagttgttttcataagctaacctgtaaagcttatggaaataagctgaaaacag 7646033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 567
Target Start/End: Complemental strand, 33714340 - 33714245
Alignment:
Q  478 aagataaaataaagtcaaactacttt---ca---tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatg 567  Q
    |||||||||||||||||||||| |||   ||   |||||||| ||||||||||||| |  | ||||||||   |||||||||||||||||||||||    
T  33714340 aagataaaataaagtcaaactattttgtacaatctataagctattttcataagctatctgggagagcttataaaaataagctgaaaacagcttatg 33714245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 505 - 579
Target Start/End: Original strand, 5088851 - 5088925
Alignment:
Q  505 atataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataa 579  Q
    ||||||| | |||||| |||| | | || |||||||| ||||||||| ||||||||||||||||| |||| ||||    
T  5088851 atataagttgttttcacaagcgatcctggagagcttattgaaataagttgaaaacagcttatggacatgttataa 5088925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 527
Target Start/End: Original strand, 5290570 - 5290650
Alignment:
Q  443 atacaagtgcttatgtataagctgtttttacaacaaagataaaataaagtcaaactactttcatataagcttttttcataagcta 527  Q
    ||||||||||||||||||||||| ||| || |||||  |||||||  |||||||||  |||||| |||||| | |||||||||||    
T  5290570 atacaagtgcttatgtataagctatttctataacaa--ataaaat--agtcaaactgttttcatgtaagctatattcataagcta 5290650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 580
Target Start/End: Complemental strand, 6509373 - 6509299
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    |||||||| ||||||||||||| | || |||||||| ||||||||| |||||| || |||| |  ||||||||||    
T  6509373 tataagctgttttcataagctatcctggagagcttattgaaataaggtgaaaatagtttataggcatgtcataag 6509299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 545 - 579
Target Start/End: Complemental strand, 10062172 - 10062138
Alignment:
Q  545 aaataagctgaaaacagcttatggaaatgtcataa 579  Q
    |||||||||||||||||||||| ||||||||||||    
T  10062172 aaataagctgaaaacagcttatagaaatgtcataa 10062138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 515 - 581
Target Start/End: Original strand, 33553249 - 33553315
Alignment:
Q  515 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||||||||||| | || ||||||||  |||||||||||  ||||||||| ||| |||||||||||    
T  33553249 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagt 33553315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 511
Target Start/End: Complemental strand, 34213631 - 34213601
Alignment:
Q  481 ataaaataaagtcaaactactttcatataag 511  Q
    |||||||||||||||||||||||||||||||    
T  34213631 ataaaataaagtcaaactactttcatataag 34213601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 515 - 580
Target Start/End: Original strand, 20672759 - 20672824
Alignment:
Q  515 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    |||| |||||||| | || ||||||||   ||||||||||||||||||||||| | ||||||||||    
T  20672759 tttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataag 20672824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 512
Target Start/End: Original strand, 26717190 - 26717254
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaagataaaataaagtcaaactactttcatataagc 512  Q
    |||||||| || |||||||  ||||| ||||| |||||||||||||||||||| ||||| ||||||    
T  26717190 aagtgcttctgaataagctaattttataacaa-gataaaataaagtcaaactattttcaaataagc 26717254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 567
Target Start/End: Original strand, 27028831 - 27028892
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatg 567  Q
    |||||||| ||||||||||||| | || ||||||||   |||||||||||||| ||||||||    
T  27028831 tataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatg 27028892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 429
Target Start/End: Original strand, 27320198 - 27320235
Alignment:
Q  392 gtttggataaacaatttcattaagcgcttatagcataa 429  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  27320198 gtttggaaaaacaatttaattaagcgcttatagcataa 27320235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 510
Target Start/End: Complemental strand, 27728127 - 27728094
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataa 510  Q
    ||||||||||||||||||||||| ||||||||||    
T  27728127 aaagataaaataaagtcaaactattttcatataa 27728094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 492
Target Start/End: Complemental strand, 40280400 - 40280296
Alignment:
Q  385 taggcctgtttggataaacaatttcattaagcgcttatagc-ataacgcttatcatacaatacaagtgcttatgtataagctgtttttacaac-aaagat 482  Q
    |||| |||||||||| |||||||  |||||||||||||||| ||| ||||||||     ||| |||||| ||| |||||| | ||| |||||| ||||||    
T  40280400 taggtctgtttggattaacaattgaattaagcgcttatagcaatagcgcttatc-----atataagtgcctatatataagttatttctacaacaaaagat 40280306  T
Q  483 aaaataaagt 492  Q
    ||||||||||    
T  40280305 aaaataaagt 40280296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 521
Target Start/End: Original strand, 2100769 - 2100813
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagcttttttcat 521  Q
    |||||||||||||||||||| || ||||||||||| | |||||||    
T  2100769 aaagataaaataaagtcaaaatattttcatataagttgttttcat 2100813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 580
Target Start/End: Original strand, 3254263 - 3254299
Alignment:
Q  544 gaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    |||||||||||||||||||||||| | ||||||||||    
T  3254263 gaaataagctgaaaacagcttatgaacatgtcataag 3254299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 429
Target Start/End: Original strand, 7008512 - 7008548
Alignment:
Q  393 tttggataaacaatttcattaagcgcttatagcataa 429  Q
    ||||||||||||| || ||||||||||||||||||||    
T  7008512 tttggataaacaacttaattaagcgcttatagcataa 7008548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 566
Target Start/End: Complemental strand, 7918843 - 7918783
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttat 566  Q
    |||||| | ||||||||||||| | ||||||||||   |||||||||||||||||| ||||    
T  7918843 tataagttgttttcataagctatcttgtagagcttgtggaaataagctgaaaacagattat 7918783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 580
Target Start/End: Original strand, 12361230 - 12361266
Alignment:
Q  544 gaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  12361230 gaaataagttgaaaacagcttatggacatgtcataag 12361266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 578
Target Start/End: Complemental strand, 28769409 - 28769337
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcata 578  Q
    |||||||| |||||||||||||   || |||| |||  ||||||||||||||||| |||||||| || |||||    
T  28769409 tataagctgttttcataagctattttggagagtttatggaaataagctgaaaacaacttatggacatatcata 28769337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 450 - 513
Target Start/End: Complemental strand, 34788561 - 34788497
Alignment:
Q  450 tgcttatgtataagctgtttttacaac-aaagataaaataaagtcaaactactttcatataagct 513  Q
    |||||| ||||||||| ||||||  || ||||||||||||||||||||||  || ||||||||||    
T  34788561 tgcttacgtataagctatttttatgaccaaagataaaataaagtcaaactgtttccatataagct 34788497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 529 - 579
Target Start/End: Original strand, 34380468 - 34380518
Alignment:
Q  529 catgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataa 579  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  34380468 catgtacagcttattgaaataagctgaaaacagcttatggaaatgtcataa 34380518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 507 - 567
Target Start/End: Original strand, 5047147 - 5047207
Alignment:
Q  507 ataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatg 567  Q
    ||||||||||||||||||||| |||| ||||||||  ||||||||||||||||||| ||||    
T  5047147 ataagcttttttcataagctatcatgaagagcttatggaaataagctgaaaacagcgtatg 5047207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 505 - 580
Target Start/End: Original strand, 27140477 - 27140552
Alignment:
Q  505 atataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    ||||||||| |||| |||||||| |||| ||||||||   |||||||||||||||| |||||||| ||||||||||    
T  27140477 atataagctgtttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcataag 27140552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 469 - 579
Target Start/End: Original strand, 30257639 - 30257756
Alignment:
Q  469 tttacaacaaagataaaataaagtcaaactactttcatataagctt-------ttttcataagctaacatgtagagcttaatgaaataagctgaaaacag 561  Q
    ||||||| ||||||||||||||||||||||  || |||||||||||       ||||||||| ||| | || || |||||  ||||||||||||||||||    
T  30257639 tttacaaaaaagataaaataaagtcaaactgtttccatataagctttaagttgttttcataaactatcctggagggcttatagaaataagctgaaaacag 30257738  T
Q  562 cttatggaaatgtcataa 579  Q
    |||||| | |||||||||    
T  30257739 cttatgaacatgtcataa 30257756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 447 - 580
Target Start/End: Complemental strand, 45999425 - 45999284
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagct-------tttttcataagctaacatgtagagc 538  Q
    ||||||| ||||||||||| ||| || |||||| ||||| ||||||||||||| ||||||||||||||        ||||| ||||||| ||| |||||     
T  45999425 aagtgctcatgtataagctatttctataacaaaagataagataaagtcaaactgctttcatataagctataaccaattttcgtaagctatcatttagaga 45999326  T
Q  539 ttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    |||  || ||||||||||||||| ||||| | ||||||||||    
T  45999325 ttacggacataagctgaaaacagtttatgaacatgtcataag 45999284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 447 - 581
Target Start/End: Complemental strand, 4699749 - 4699610
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaaca-aagataaaataaagtcaaactactttcatata----agcttttttcataagctaacatgtagagctta 541  Q
    ||||||||||| ||||||| ||| ||||||| ||||| |||||||||||||||| |||  ||||    || | ||||||||| ||| |  | ||||||||    
T  4699749 aagtgcttatgaataagctatttctacaacacaagattaaataaagtcaaactatttttgtataatccagttattttcataaactatcccggagagctta 4699650  T
Q  542 atgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
      |||||||||| ||||||||||||| | |||||||||||    
T  4699649 tagaaataagctaaaaacagcttatgaacatgtcataagt 4699610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 526
Target Start/End: Complemental strand, 41516186 - 41516137
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagcttttttcataagct 526  Q
    |||||||||| |||||||||||| ||||||||||||| ||||||||||||    
T  41516186 aaagataaaagaaagtcaaactattttcatataagctattttcataagct 41516137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 581
Target Start/End: Original strand, 45205032 - 45205143
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagctt-------ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatgga 569  Q
    ||||||||||||||||||||||| || ||||||||||        ||||||||||||| ||||||||| | |  ||||||||||||||||| |||| |||    
T  45205032 aaagataaaataaagtcaaactatttccatataagctagaagttgttttcataagctatcatgtagagttcatggaaataagctgaaaacaacttaggga 45205131  T
Q  570 aatgtcataagt 581  Q
     || ||||||||    
T  45205132 catatcataagt 45205143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 477 - 580
Target Start/End: Complemental strand, 12477393 - 12477283
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataag-------cttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatgga 569  Q
    ||||||||||||||||||||||  |||||| ||||       ||||||| |||||||| |||| ||||  ||  ||||||||||||||||| ||||||||    
T  12477393 aaagataaaataaagtcaaactgttttcatgtaagatatatgcttttttaataagctatcatggagagtgtatggaaataagctgaaaacaacttatgga 12477294  T
Q  570 aatgtcataag 580  Q
     ||||||||||    
T  12477293 catgtcataag 12477283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 45107556 - 45107620
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaagataaaataaagtcaaactactttcatataag 511  Q
    |||||||||| |||||||| ||| || || ||| ||||||||||||||||||| |||||||||||    
T  45107556 aagtgcttatctataagctatttctataagaaaaataaaataaagtcaaactattttcatataag 45107620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 506 - 577
Target Start/End: Complemental strand, 6231886 - 6231815
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcat 577  Q
    |||||||| ||||| ||||||||| || ||| ||||  |||||||||||||||||| ||||||| |||||||    
T  6231886 tataagctgttttcgtaagctaacctgaagaacttatagaaataagctgaaaacagtttatggacatgtcat 6231815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 447 - 499
Target Start/End: Original strand, 1730825 - 1730878
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaac-aaagataaaataaagtcaaacta 499  Q
    ||||||||||||||||||| |||||  ||| |||||||||||||||||||||||    
T  1730825 aagtgcttatgtataagctatttttttaaccaaagataaaataaagtcaaacta 1730878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 476 - 513
Target Start/End: Complemental strand, 48830183 - 48830146
Alignment:
Q  476 caaagataaaataaagtcaaactactttcatataagct 513  Q
    |||||||||||||||||||||||| |||||||||||||    
T  48830183 caaagataaaataaagtcaaactattttcatataagct 48830146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 513 - 581
Target Start/End: Complemental strand, 35080132 - 35080064
Alignment:
Q  513 ttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||||||| ||||| |||| |||||||   |||||||||| ||||||||||||| | |||||||||||    
T  35080132 ttttttcatgagctatcatggagagcttgtcgaaataagctcaaaacagcttatgaacatgtcataagt 35080064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 440
Target Start/End: Complemental strand, 48133130 - 48133078
Alignment:
Q  389 cctgtttggataaacaatttcattaagcgcttatagcat-aacgcttatcata 440  Q
    |||||||||||| |||| || |||||||||||||||||| |||||||||||||    
T  48133130 cctgtttggatagacaacttaattaagcgcttatagcataaacgcttatcata 48133078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 580
Target Start/End: Complemental strand, 10199513 - 10199404
Alignment:
Q  478 aagataaaataaagtcaaactactttcatataa-------gcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaa 570  Q
    |||||||||||||||||||||| |||| |||||       |||||||||||||||||   |  ||||||||   |||||||||||||||| |||||| |     
T  10199513 aagataaaataaagtcaaactattttcgtataatcgataagcttttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaac 10199414  T
Q  571 atgtcataag 580  Q
    ||||||||||    
T  10199413 atgtcataag 10199404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 569
Target Start/End: Complemental strand, 12564944 - 12564881
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatgga 569  Q
    |||||| | ||||||||||||| | | ||| |||||  ||||||||||||||||||||||||||    
T  12564944 tataagttgttttcataagctatcttttagtgcttacggaaataagctgaaaacagcttatgga 12564881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 581
Target Start/End: Original strand, 15579482 - 15579557
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||| || || ||||||| ||||| ||| |||  |||||||||||| |||| |||||||| |||||||||||    
T  15579482 tataagctgttctcgtaagctatcatgttgagtttatggaaataagctgagaacaacttatggacatgtcataagt 15579557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 513
Target Start/End: Original strand, 50998489 - 50998552
Alignment:
Q  451 gcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagct 513  Q
    ||||||||||||||| ||| |  |||||| ||||||| ||| ||||||||||||||||||||||    
T  50998489 gcttatgtataagctatttctgtaacaaaagataaaacaaaatcaaactactttcatataagct 50998552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 515 - 581
Target Start/End: Complemental strand, 3052767 - 3052701
Alignment:
Q  515 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||||||||||| |||| |||||||| ||||| |||||||| | |||||||| | |||||| ||||    
T  3052767 ttttcataagctagcatggagagcttattgaaagaagctgaatatagcttatgaacatgtcaaaagt 3052701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 523
Target Start/End: Original strand, 25719498 - 25719544
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagcttttttcataa 523  Q
    |||||| ||||||||| |||||| ||||||||| |||||||||||||    
T  25719498 aaagatgaaataaagtaaaactattttcatatatgcttttttcataa 25719544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 534 - 580
Target Start/End: Original strand, 26184776 - 26184822
Alignment:
Q  534 agagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    ||||||||  ||||||| |||||||||||||||||| ||||||||||    
T  26184776 agagcttatggaaataatctgaaaacagcttatggacatgtcataag 26184822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 515 - 569
Target Start/End: Complemental strand, 29834966 - 29834912
Alignment:
Q  515 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatgga 569  Q
    ||||||||||||| |||||||||||||  |||||||  |||||| ||||||||||    
T  29834966 ttttcataagctatcatgtagagcttatggaaataaattgaaaaaagcttatgga 29834912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 580
Target Start/End: Original strand, 34290236 - 34290310
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    |||||||| ||||||||||||| | || ||| ||||   |||||||||||||||| |||||| | ||||||||||    
T  34290236 tataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaatatgtcataag 34290310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 560
Target Start/End: Original strand, 49175595 - 49175673
Alignment:
Q  482 taaaataaagtcaaactactttcatataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaaca 560  Q
    |||||||||| |||||   ||||||||||| | ||| || |||||| |||||||| ||||  |||||||||||||||||    
T  49175595 taaaataaagccaaacagttttcatataagttatttgcacaagctatcatgtagaacttatggaaataagctgaaaaca 49175673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Original strand, 17628637 - 17628674
Alignment:
Q  544 gaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  17628637 gaaatatgctgaaaacagcttatggacatgtcataagt 17628674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 515 - 580
Target Start/End: Complemental strand, 27963431 - 27963366
Alignment:
Q  515 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    |||||||||||||  ||| ||||||||   ||||||||| |||||| |||||||| ||||||||||    
T  27963431 ttttcataagctattatggagagcttatataaataagctaaaaacaacttatggacatgtcataag 27963366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 519 - 580
Target Start/End: Original strand, 35925703 - 35925764
Alignment:
Q  519 cataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    ||||||||| |||| |||| |||  |||||||| ||||||||||||||| | ||||||||||    
T  35925703 cataagctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataag 35925764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 581
Target Start/End: Complemental strand, 37593744 - 37593679
Alignment:
Q  516 tttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||||||||||   || ||||||||   ||||||||||||||||||||||| | |||||||||||    
T  37593744 tttcataagctattttgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagt 37593679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 561
Target Start/End: Original strand, 43332486 - 43332539
Alignment:
Q  508 taagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacag 561  Q
    |||||| ||||||||||||| | || |||||||| | |||||||||||||||||    
T  43332486 taagctgttttcataagctatcttgaagagcttattaaaataagctgaaaacag 43332539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 515 - 580
Target Start/End: Original strand, 43338125 - 43338190
Alignment:
Q  515 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    |||||||||||||||||| ||||||||   ||||| |||||||| || ||||| | ||||||||||    
T  43338125 ttttcataagctaacatggagagcttatgaaaataggctgaaaatagattatgaacatgtcataag 43338190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 515 - 580
Target Start/End: Original strand, 52190138 - 52190203
Alignment:
Q  515 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    ||||||||||||| |||| ||||||||   ||||||||||||||| |||| ||||  |||||||||    
T  52190138 ttttcataagctatcatggagagcttacgaaaataagctgaaaacggcttgtggacttgtcataag 52190203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 513
Target Start/End: Original strand, 15360858 - 15360894
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagct 513  Q
    ||||||||||||||||||||||  |||||||||||||    
T  15360858 aaagataaaataaagtcaaactgttttcatataagct 15360894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 513
Target Start/End: Complemental strand, 18434584 - 18434548
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagct 513  Q
    |||||||||||||||||||||| || |||||||||||    
T  18434584 aaagataaaataaagtcaaactgctctcatataagct 18434548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 513
Target Start/End: Complemental strand, 28467413 - 28467377
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagct 513  Q
    |||||||||||||||||||| || |||||||||||||    
T  28467413 aaagataaaataaagtcaaattattttcatataagct 28467377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 516 - 560
Target Start/End: Complemental strand, 35590952 - 35590908
Alignment:
Q  516 tttcataagctaacatgtagagcttaatgaaataagctgaaaaca 560  Q
    |||||||||||| |||| ||||||||  |||||||||||||||||    
T  35590952 tttcataagctatcatggagagcttatggaaataagctgaaaaca 35590908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 580
Target Start/End: Original strand, 37811854 - 37811926
Alignment:
Q  508 taagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    |||||| ||||||||||| | |||| |||||| |  |||||||| ||||||||| ||||| | ||||||||||    
T  37811854 taagctgttttcataagccatcatggagagctaatggaaataagttgaaaacagtttatgaacatgtcataag 37811926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 505 - 569
Target Start/End: Complemental strand, 39270496 - 39270432
Alignment:
Q  505 atataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatgga 569  Q
    ||||||||| ||||||||||||| |||  ||||| ||   ||||||| |||||||||||||||||    
T  39270496 atataagctgttttcataagctaccatagagagcatatgaaaataagttgaaaacagcttatgga 39270432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 498
Target Start/End: Original strand, 42550170 - 42550226
Alignment:
Q  443 atacaagtgcttatgtataagctgtttttac-aacaaagataaaataaagtcaaact 498  Q
    |||||||||||||||||||||||  || ||| |  ||||||||||||||||||||||    
T  42550170 atacaagtgcttatgtataagctagttctacgataaaagataaaataaagtcaaact 42550226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 513
Target Start/End: Complemental strand, 44936696 - 44936660
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagct 513  Q
    |||||||| |||||||||||||| |||||||||||||    
T  44936696 aaagataagataaagtcaaactattttcatataagct 44936660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 455 - 563
Target Start/End: Complemental strand, 40837557 - 40837448
Alignment:
Q  455 atgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagcttttttcataagctaacatgtagagcttaatgaaataagct 553  Q
    ||||||||||| ||| || |||||| |||||| |||||||||| |  ||||||||| | | |||| |||||||| |||||||||||||  ||||||||||    
T  40837557 atgtataagctatttctataacaaaagataaattaaagtcaaattgttttcatatatgttgttttaataagctatcatgtagagcttatggaaataagct 40837458  T
Q  554 gaaaacagct 563  Q
    ||||| ||||    
T  40837457 gaaaatagct 40837448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 514 - 581
Target Start/End: Complemental strand, 34652098 - 34652031
Alignment:
Q  514 tttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||||||||| | || ||||||||  |||||||| ||||||||||||||||| |||||||||||    
T  34652098 tttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataagt 34652031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 447 - 528
Target Start/End: Original strand, 43808509 - 43808591
Alignment:
Q  447 aagtgcttatgtataagctgttttt-acaacaaagataaaataaagtcaaactactttcatataagcttttttcataagctaa 528  Q
    ||||| ||||||||||||| ||||| | |||||| |||||||||||| |||||| ||||||||||||| |||  |||||||||    
T  43808509 aagtgtttatgtataagctattttttataacaaacataaaataaagttaaactattttcatataagctgtttctataagctaa 43808591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 566
Target Start/End: Complemental strand, 33267653 - 33267534
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaaga-taaaataaagtcaaactactttcatataagcttttttcataagctaacatgtagagcttaatga 545  Q
    |||||||||||||||| || ||| || |||||| | ||||||||||| |||||  ||||||||||||| |||| ||||||||   || ||||||| ||||    
T  33267653 aagtgcttatgtataatctatttctataacaaacagtaaaataaagttaaactgttttcatataagctgtttttataagctatgctggagagctt-atga 33267555  T
Q  546 aataagctgaaaacagcttat 566  Q
    | |||| || |||||||||||    
T  33267554 agtaagttgtaaacagcttat 33267534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 451 - 513
Target Start/End: Complemental strand, 17952834 - 17952771
Alignment:
Q  451 gcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagct 513  Q
    |||||| |||||||| ||| || |||||| |||||||||||||||||||| |||||||||||||    
T  17952834 gcttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataagct 17952771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 447 - 513
Target Start/End: Complemental strand, 18962175 - 18962108
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagct 513  Q
    |||||||||||||| |||| |||||| |||||| ||||||||||||| |||||  |||||||||||||    
T  18962175 aagtgcttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataagct 18962108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 506 - 581
Target Start/End: Original strand, 32821809 - 32821884
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||| || ||||||||||||| | |  ||||||||  ||||||| |||||||||||||||||| |||||||||||    
T  32821809 tataaactgttttcataagctatcctaaagagcttatagaaataaactgaaaacagcttatggacatgtcataagt 32821884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 515 - 581
Target Start/End: Complemental strand, 1939393 - 1939327
Alignment:
Q  515 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||||||||   || ||||||||  |||||||| ||||||||||||||||| |||||||||||    
T  1939393 ttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatgtcataagt 1939327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 519 - 581
Target Start/End: Original strand, 10285873 - 10285935
Alignment:
Q  519 cataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||||||||  ||| ||||  |||||||| ||||||||||||||||| |||||||||||    
T  10285873 cataagctaacatagagaacttatggaaataagttgaaaacagcttatggacatgtcataagt 10285935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 515 - 581
Target Start/End: Original strand, 42131626 - 42131692
Alignment:
Q  515 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||||||||||| |||| ||| ||||| |||||||||| ||| ||||||||||| |||| ||||||    
T  42131626 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagt 42131692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 515 - 581
Target Start/End: Complemental strand, 43065511 - 43065445
Alignment:
Q  515 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||||| || | || |||||||| ||||||||||||||||||  ||||||| |||||||||||    
T  43065511 ttttcataagttatcgtggagagcttattgaaataagctgaaaacaatttatggacatgtcataagt 43065445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 477 - 524
Target Start/End: Original strand, 3458621 - 3458669
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagct-tttttcataag 524  Q
    ||||||||||||||||||||||  ||||||||||||| |||||||||||    
T  3458621 aaagataaaataaagtcaaacttttttcatataagctgtttttcataag 3458669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 506 - 578
Target Start/End: Complemental strand, 10563628 - 10563556
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcata 578  Q
    |||||| | |||||||||||||   || |||||||||  |||||||||||||| |||||||||| ||||||||    
T  10563628 tataagttgttttcataagctatgctgaagagcttaagaaaataagctgaaaatagcttatggacatgtcata 10563556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 477 - 513
Target Start/End: Complemental strand, 31740065 - 31740029
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagct 513  Q
    ||||||||||||||||||||||| |||||||||||||    
T  31740065 aaagataaaataaagtcaaactattttcatataagct 31740029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 513
Target Start/End: Complemental strand, 40722610 - 40722547
Alignment:
Q  449 gtgcttatgtataagctgtttttacaacaaagataaaataaagtcaaactactttcatataagct 513  Q
    ||||||||| ||||||| |||||| |||||| ||||||||||||| ||||  |||||||||||||    
T  40722610 gtgcttatgcataagctttttttataacaaa-ataaaataaagtcgaactgttttcatataagct 40722547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 534 - 581
Target Start/End: Complemental strand, 25796242 - 25796195
Alignment:
Q  534 agagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||| |||||||||||||||||| |||||||| |||| ||||||    
T  25796242 agagcttattgaaataagctgaaaacaacttatggatatgtaataagt 25796195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 513
Target Start/End: Original strand, 28902010 - 28902077
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaaca-aagataaaataaagtcaaactactttcatataagct 513  Q
    ||||||||||||||||||| |||||| |||| ||| ||||||||| | |||||  |||||||||||||    
T  28902010 aagtgcttatgtataagctatttttataacataagttaaaataaaattaaactgttttcatataagct 28902077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 581
Target Start/End: Original strand, 29633073 - 29633148
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||| ||||||||||||| | |  | ||||||   ||||| ||||||||||||||||||| |||||||||||    
T  29633073 tataagctcttttcataagctatcctaaatagcttatcaaaatatgctgaaaacagcttatggagatgtcataagt 29633148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 579
Target Start/End: Original strand, 33192212 - 33192275
Alignment:
Q  516 tttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataa 579  Q
    |||||||||||| | || ||||||||   | ||||||||||||||||||||||| |||||||||    
T  33192212 tttcataagctatcctggagagcttataaatataagctgaaaacagcttatggatatgtcataa 33192275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 545 - 579
Target Start/End: Original strand, 10285394 - 10285428
Alignment:
Q  545 aaataagctgaaaacagcttatggaaatgtcataa 579  Q
    ||||||||||||||||||||||||| |||||||||    
T  10285394 aaataagctgaaaacagcttatggacatgtcataa 10285428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 429
Target Start/End: Complemental strand, 14317008 - 14316970
Alignment:
Q  391 tgtttggataaacaatttcattaagcgcttatagcataa 429  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  14317008 tgtttggataaacaaattaattaagcgcttatagcataa 14316970  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 547 - 580
Target Start/End: Original strand, 787373 - 787406
Alignment:
Q  547 ataagctgaaaacagcttatggaaatgtcataag 580  Q
    ||||||||||||||||||||||| ||||||||||    
T  787373 ataagctgaaaacagcttatggacatgtcataag 787406  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 510
Target Start/End: Original strand, 3102629 - 3102690
Alignment:
Q  450 tgcttatgtataagctgtttttacaacaaag-ataaaataaagtcaaactactttcatataa 510  Q
    |||||||||||||||| |||||| | ||||  ||||||||||||||||||| ||| ||||||    
T  3102629 tgcttatgtataagctatttttatagcaaaatataaaataaagtcaaactatttttatataa 3102690  T

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Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 498
Target Start/End: Complemental strand, 3235568 - 3235468
Alignment:
Q  396 ggataaacaatttcattaagcgcttatagcataa-cgcttatcatacaatacaagtgcttatgtataagctgtttttacaacaaagataaaataaagtca 494  Q
    ||||||| || || ||| ||| |||||||||||| | |||||||||   || |||||||||||||| |||| |||||| ||||||   ||||||||||||    
T  3235568 ggataaaaaacttaattgagcacttatagcataaacacttatcata---tataagtgcttatgtattagctatttttataacaaatgaaaaataaagtca 3235472  T
Q  495 aact 498  Q
    ||||    
T  3235471 aact 3235468  T

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Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 495
Target Start/End: Complemental strand, 5045294 - 5045245
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaac-aaagataaaataaagtcaa 495  Q
    ||||| ||||||||||||| |||||| ||| |||||||||||||||||||    
T  5045294 aagtgtttatgtataagctatttttataacaaaagataaaataaagtcaa 5045245  T

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Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 526
Target Start/End: Original strand, 14209241 - 14209290
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagcttttttcataagct 526  Q
    |||||||||||||| |||||||  ||||||||||||| ||| ||||||||    
T  14209241 aaagataaaataaattcaaactgttttcatataagctatttccataagct 14209290  T

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Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 14451082 - 14451045
Alignment:
Q  544 gaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||||||||||||||||||||  |||||||||||    
T  14451082 gaaataagctgaaaacagcttatggtcatgtcataagt 14451045  T

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Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 567
Target Start/End: Complemental strand, 36415743 - 36415682
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatg 567  Q
    |||||||| ||||||||||||| |||||||| ||||   ||||||| |||||||| ||||||    
T  36415743 tataagctgttttcataagctatcatgtagaacttacgaaaataagatgaaaacaacttatg 36415682  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 513
Target Start/End: Complemental strand, 1160846 - 1160814
Alignment:
Q  481 ataaaataaagtcaaactactttcatataagct 513  Q
    ||||||||||||||||||| |||||||||||||    
T  1160846 ataaaataaagtcaaactattttcatataagct 1160814  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 505 - 581
Target Start/End: Complemental strand, 1742103 - 1742027
Alignment:
Q  505 atataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||||||| ||||||||| ||| |||| |||| |||  |||||||| |||| | |||||||| | |||||||||||    
T  1742103 atataagctgttttcataatctatcatgaagagtttatggaaataagttgaagatagcttatgcacatgtcataagt 1742027  T

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Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 510
Target Start/End: Complemental strand, 3423909 - 3423841
Alignment:
Q  443 atacaagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataa 510  Q
    ||||||||| ||||||||||| | |||||  | |||| ||||||||||||||||| || ||||||||||    
T  3423909 atacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 3423841  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 513
Target Start/End: Complemental strand, 5043666 - 5043630
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagct 513  Q
    ||||||||||||||||||||||  |||||||||||||    
T  5043666 aaagataaaataaagtcaaactgttttcatataagct 5043630  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 580
Target Start/End: Original strand, 6547940 - 6547976
Alignment:
Q  544 gaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  6547940 gaaataagctgaaaacagcttatggacatggcataag 6547976  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 581
Target Start/End: Original strand, 9174815 - 9174891
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatgga-aatgtcataagt 581  Q
    |||||||| ||||||||||||| | |  ||||||||   |||||||||||||| |||||||| | ||||||||||||    
T  9174815 tataagctgttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatgaacaatgtcataagt 9174891  T

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Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 544 - 580
Target Start/End: Original strand, 18884905 - 18884941
Alignment:
Q  544 gaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  18884905 gaaataatctgaaaacagctaatggaaatgtcataag 18884941  T

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Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 513
Target Start/End: Complemental strand, 28803612 - 28803576
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagct 513  Q
    ||||||||||||||||||||||  |||||||||||||    
T  28803612 aaagataaaataaagtcaaactgatttcatataagct 28803576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 545 - 581
Target Start/End: Complemental strand, 30538204 - 30538168
Alignment:
Q  545 aaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    |||||||||||||||| |||||||| |||||||||||    
T  30538204 aaataagctgaaaacaacttatggacatgtcataagt 30538168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 540 - 580
Target Start/End: Original strand, 33503041 - 33503081
Alignment:
Q  540 taatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    |||||| |||||||||||| |||||||| ||||||||||||    
T  33503041 taatgagataagctgaaaatagcttatgaaaatgtcataag 33503081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 452 - 511
Target Start/End: Original strand, 34339844 - 34339904
Alignment:
Q  452 cttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataag 511  Q
    ||||||| |||| |||||||| |||||| ||||||||||||||||| || |||| ||||||    
T  34339844 cttatgtgtaagttgtttttaaaacaaaagataaaataaagtcaaattattttcgtataag 34339904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 513
Target Start/End: Complemental strand, 37292453 - 37292417
Alignment:
Q  477 aaagataaaataaagtcaaactactttcatataagct 513  Q
    |||||||||||||||| |||||| |||||||||||||    
T  37292453 aaagataaaataaagtaaaactattttcatataagct 37292417  T

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Target: scaffold0590 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 447 - 512
Target Start/End: Complemental strand, 1211 - 1145
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagc 512  Q
    ||||||||||||||||||| ||| || |||||| |||||||||||||||||||| | ||||||||||    
T  1211 aagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataagc 1145  T

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Target: scaffold0275 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 447 - 512
Target Start/End: Original strand, 2764 - 2830
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagc 512  Q
    ||||||||||||||||||| ||| || |||||| |||||||||||||||||||| | ||||||||||    
T  2764 aagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataagc 2830  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 510
Target Start/End: Original strand, 27455 - 27573
Alignment:
Q  389 cctgtttggataaacaatttcattaagcgcttatagcataa-cgcttatcatacaatacaagtgcttatgtataagctgtttttacaaca-aagataaaa 486  Q
    ||||||||||||||||| || | ||| |||||||||||||| | ||||||||  ||     ||||||||||||||| | ||| || |||| |||||||||    
T  27455 cctgtttggataaacaacttaaataaacgcttatagcataagctcttatcatgtaa-----gtgcttatgtataagttatttctataacagaagataaaa 27549  T
Q  487 taaagtcaaactactttcatataa 510  Q
    |||||||||| |  ||||||||||    
T  27550 taaagtcaaattgttttcatataa 27573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 452 - 527
Target Start/End: Complemental strand, 21410 - 21334
Alignment:
Q  452 cttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagcttttttcataagcta 527  Q
    |||||||||||||| |||||| |  ||| ||||||||||||| ||| |  |||| |||||||| |||||||||||||    
T  21410 cttatgtataagctatttttataggaaaagataaaataaagttaaattgttttcgtataagctgttttcataagcta 21334  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 581
Target Start/End: Complemental strand, 143132 - 143057
Alignment:
Q  506 tataagcttttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagt 581  Q
    ||||||||  |||||||||||| || | |||||||| |   ||||||||||||||||||| |||||| ||||||||    
T  143132 tataagctgatttcataagctatcaaggagagcttattttcataagctgaaaacagcttacggaaatttcataagt 143057  T

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Target: scaffold0072 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 519 - 580
Target Start/End: Original strand, 4972 - 5033
Alignment:
Q  519 cataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataag 580  Q
    ||||| ||| |||||| ||||||  |||||||||| ||| ||||||||||| ||||||||||    
T  4972 cataaactatcatgtatagcttatagaaataagctaaaatcagcttatggacatgtcataag 5033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 29; Significance: 0.0000008; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 513
Target Start/End: Complemental strand, 6600 - 6568
Alignment:
Q  481 ataaaataaagtcaaactactttcatataagct 513  Q
    ||||||||||||||||||| |||||||||||||    
T  6600 ataaaataaagtcaaactattttcatataagct 6568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 513
Target Start/End: Complemental strand, 13620 - 13588
Alignment:
Q  481 ataaaataaagtcaaactactttcatataagct 513  Q
    ||||||||||||||||||| |||||||||||||    
T  13620 ataaaataaagtcaaactattttcatataagct 13588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 479
Target Start/End: Complemental strand, 35933 - 35901
Alignment:
Q  447 aagtgcttatgtataagctgtttttacaacaaa 479  Q
    |||||||||||||||||||||||||| ||||||    
T  35933 aagtgcttatgtataagctgtttttataacaaa 35901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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