View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2505_high_18 (Length: 250)

Name: NF2505_high_18
Description: NF2505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2505_high_18
NF2505_high_18
[»] chr1 (54 HSPs)
chr1 (10-204)||(27142862-27143056)
chr1 (54-124)||(52382406-52382476)
chr1 (196-247)||(27142668-27142719)
chr1 (51-125)||(12267650-12267724)
chr1 (47-124)||(26924140-26924217)
chr1 (51-124)||(46363431-46363504)
chr1 (51-111)||(2886186-2886246)
chr1 (49-124)||(37495842-37495917)
chr1 (51-116)||(10587609-10587674)
chr1 (51-124)||(29756162-29756235)
chr1 (51-124)||(37541133-37541206)
chr1 (51-111)||(24131433-24131493)
chr1 (54-110)||(50333953-50334009)
chr1 (51-118)||(2219474-2219541)
chr1 (51-110)||(33149288-33149347)
chr1 (57-111)||(27210000-27210054)
chr1 (58-124)||(27932853-27932919)
chr1 (54-124)||(37925266-37925336)
chr1 (54-111)||(705382-705439)
chr1 (54-119)||(5115850-5115915)
chr1 (51-111)||(4466187-4466247)
chr1 (51-111)||(40754446-40754506)
chr1 (51-111)||(51049523-51049583)
chr1 (51-102)||(3718891-3718942)
chr1 (57-124)||(21304826-21304893)
chr1 (54-124)||(14352584-14352654)
chr1 (54-124)||(31798436-31798506)
chr1 (54-124)||(37281017-37281087)
chr1 (54-124)||(40061827-40061897)
chr1 (51-96)||(2571378-2571423)
chr1 (54-111)||(16040095-16040152)
chr1 (51-92)||(16451646-16451687)
chr1 (51-92)||(16460799-16460840)
chr1 (47-119)||(31634318-31634388)
chr1 (51-119)||(7785299-7785367)
chr1 (51-111)||(11425902-11425962)
chr1 (51-111)||(18186239-18186299)
chr1 (51-111)||(29225441-29225501)
chr1 (67-99)||(34987935-34987967)
chr1 (51-111)||(36232822-36232882)
chr1 (51-111)||(50086024-50086084)
chr1 (51-102)||(2246319-2246370)
chr1 (51-102)||(29225768-29225819)
chr1 (51-102)||(34813932-34813983)
chr1 (57-124)||(45305874-45305941)
chr1 (54-92)||(5359319-5359357)
chr1 (54-124)||(5503438-5503508)
chr1 (52-102)||(25842615-25842665)
chr1 (57-119)||(32587786-32587848)
chr1 (51-97)||(52146399-52146445)
chr1 (54-111)||(50267471-50267528)
chr1 (51-111)||(17342843-17342903)
chr1 (57-93)||(20988533-20988569)
chr1 (69-101)||(36467238-36467270)
[»] chr4 (37 HSPs)
chr4 (51-124)||(35998136-35998209)
chr4 (51-124)||(39052920-39052993)
chr4 (51-113)||(47277712-47277774)
chr4 (54-111)||(36047132-36047189)
chr4 (51-124)||(38319926-38319999)
chr4 (51-124)||(44633172-44633244)
chr4 (55-124)||(48400650-48400719)
chr4 (54-111)||(55360380-55360437)
chr4 (48-102)||(53848658-53848712)
chr4 (54-119)||(42132831-42132896)
chr4 (54-119)||(52677055-52677120)
chr4 (54-102)||(11583912-11583960)
chr4 (69-125)||(49401689-49401745)
chr4 (51-102)||(22020551-22020602)
chr4 (51-102)||(29550768-29550819)
chr4 (57-124)||(32949868-32949935)
chr4 (57-108)||(33093494-33093545)
chr4 (51-97)||(29644370-29644416)
chr4 (54-124)||(38160171-38160241)
chr4 (54-102)||(3505740-3505788)
chr4 (51-111)||(10099757-10099817)
chr4 (58-110)||(30680471-30680523)
chr4 (51-111)||(37315954-37316014)
chr4 (54-102)||(49218823-49218871)
chr4 (57-124)||(8759800-8759867)
chr4 (54-97)||(37309716-37309759)
chr4 (37-124)||(43421301-43421388)
chr4 (51-102)||(49448856-49448907)
chr4 (55-110)||(54217361-54217416)
chr4 (54-124)||(22872407-22872477)
chr4 (54-124)||(28330812-28330882)
chr4 (57-111)||(42051688-42051742)
chr4 (51-124)||(20964307-20964380)
chr4 (56-113)||(35029055-35029112)
chr4 (57-97)||(30568680-30568720)
chr4 (51-95)||(39976438-39976482)
chr4 (51-83)||(42185856-42185888)
[»] scaffold0685 (1 HSPs)
scaffold0685 (54-124)||(6419-6489)
[»] chr3 (25 HSPs)
chr3 (47-117)||(35300648-35300718)
chr3 (51-124)||(1334800-1334873)
chr3 (51-124)||(29858884-29858957)
chr3 (51-124)||(54021477-54021550)
chr3 (51-111)||(1923105-1923165)
chr3 (57-124)||(41287283-41287350)
chr3 (51-102)||(46194247-46194298)
chr3 (51-110)||(48409599-48409658)
chr3 (49-124)||(51164965-51165040)
chr3 (51-125)||(32977808-32977882)
chr3 (51-111)||(39329782-39329842)
chr3 (51-111)||(53051041-53051101)
chr3 (54-97)||(53876482-53876525)
chr3 (51-124)||(38600825-38600898)
chr3 (51-111)||(9218160-9218220)
chr3 (49-97)||(26134749-26134797)
chr3 (51-111)||(53754096-53754156)
chr3 (53-96)||(8498271-8498314)
chr3 (51-102)||(47496184-47496235)
chr3 (54-111)||(21585442-21585499)
chr3 (54-119)||(48744277-48744342)
chr3 (54-102)||(3862213-3862261)
chr3 (51-119)||(27668351-27668419)
chr3 (56-96)||(36317352-36317392)
chr3 (57-97)||(50150413-50150453)
[»] chr8 (32 HSPs)
chr8 (51-119)||(11637155-11637223)
chr8 (32-124)||(8394274-8394366)
chr8 (51-111)||(39998178-39998238)
chr8 (51-124)||(8418321-8418394)
chr8 (38-102)||(5878267-5878331)
chr8 (51-111)||(14748738-14748798)
chr8 (57-108)||(23764987-23765038)
chr8 (51-125)||(28791323-28791397)
chr8 (51-125)||(32679050-32679124)
chr8 (51-125)||(41726536-41726610)
chr8 (51-124)||(14689975-14690048)
chr8 (51-119)||(2875110-2875178)
chr8 (54-124)||(29638319-29638389)
chr8 (54-124)||(40077769-40077839)
chr8 (54-124)||(41759649-41759719)
chr8 (51-124)||(27868344-27868417)
chr8 (54-95)||(32231768-32231809)
chr8 (51-124)||(37459365-37459438)
chr8 (51-111)||(2195483-2195543)
chr8 (57-97)||(4274345-4274385)
chr8 (54-110)||(14117480-14117536)
chr8 (51-103)||(33826246-33826298)
chr8 (51-97)||(44790468-44790514)
chr8 (57-119)||(45197632-45197694)
chr8 (57-111)||(45420971-45421025)
chr8 (54-119)||(18725927-18725992)
chr8 (54-111)||(25174617-25174674)
chr8 (49-102)||(29451362-29451415)
chr8 (51-120)||(42412406-42412475)
chr8 (54-102)||(17005963-17006011)
chr8 (54-102)||(17571237-17571285)
chr8 (57-97)||(44615411-44615451)
[»] chr7 (31 HSPs)
chr7 (51-124)||(2849270-2849343)
chr7 (51-124)||(38589749-38589822)
chr7 (51-111)||(32775998-32776058)
chr7 (57-111)||(6838083-6838137)
chr7 (51-125)||(45218176-45218250)
chr7 (51-119)||(9602876-9602944)
chr7 (51-119)||(9830447-9830515)
chr7 (51-111)||(37496429-37496489)
chr7 (51-102)||(21412077-21412127)
chr7 (54-124)||(18731457-18731527)
chr7 (54-111)||(34064233-34064290)
chr7 (51-124)||(36070120-36070193)
chr7 (51-124)||(37264328-37264401)
chr7 (54-102)||(3667918-3667966)
chr7 (54-102)||(5068339-5068387)
chr7 (57-124)||(30459083-30459150)
chr7 (51-110)||(39343704-39343763)
chr7 (54-124)||(27337892-27337962)
chr7 (51-124)||(2842071-2842144)
chr7 (51-124)||(25778759-25778832)
chr7 (54-119)||(28333189-28333254)
chr7 (68-111)||(24288455-24288498)
chr7 (51-102)||(30462675-30462726)
chr7 (54-97)||(32972064-32972107)
chr7 (51-109)||(30659514-30659572)
chr7 (57-111)||(43007915-43007969)
chr7 (51-97)||(46095466-46095512)
chr7 (54-102)||(10355776-10355824)
chr7 (54-102)||(14648960-14649008)
chr7 (51-111)||(29997061-29997121)
chr7 (51-111)||(47238232-47238292)
[»] chr2 (40 HSPs)
chr2 (51-124)||(9472437-9472510)
chr2 (51-111)||(7931528-7931588)
chr2 (51-124)||(7213490-7213563)
chr2 (54-110)||(28844077-28844133)
chr2 (51-125)||(24356126-24356200)
chr2 (64-124)||(18460516-18460576)
chr2 (51-122)||(26273774-26273845)
chr2 (51-124)||(4283038-4283111)
chr2 (54-111)||(6972572-6972629)
chr2 (51-111)||(2427375-2427435)
chr2 (54-110)||(13222086-13222142)
chr2 (51-111)||(14384310-14384370)
chr2 (51-102)||(3199913-3199964)
chr2 (51-102)||(36748163-36748214)
chr2 (54-113)||(39166726-39166785)
chr2 (51-97)||(435124-435170)
chr2 (57-111)||(1908526-1908580)
chr2 (51-97)||(23684974-23685020)
chr2 (51-97)||(28301449-28301495)
chr2 (51-124)||(38872941-38873012)
chr2 (51-124)||(4794588-4794661)
chr2 (68-124)||(314459-314515)
chr2 (51-111)||(43427118-43427178)
chr2 (57-124)||(2048313-2048380)
chr2 (51-82)||(5711008-5711039)
chr2 (69-124)||(9724911-9724966)
chr2 (51-124)||(928557-928628)
chr2 (55-97)||(6685709-6685751)
chr2 (54-92)||(33880176-33880214)
chr2 (51-124)||(43182289-43182360)
chr2 (54-95)||(3487412-3487453)
chr2 (51-124)||(19515896-19515969)
chr2 (54-119)||(39095649-39095714)
chr2 (69-125)||(43056408-43056464)
chr2 (51-124)||(44424282-44424355)
chr2 (54-102)||(734053-734101)
chr2 (51-111)||(8550674-8550734)
chr2 (54-102)||(10069626-10069674)
chr2 (54-102)||(37529112-37529160)
chr2 (51-119)||(41436094-41436162)
[»] scaffold0086 (1 HSPs)
scaffold0086 (51-124)||(5833-5906)
[»] chr6 (15 HSPs)
chr6 (51-124)||(33017963-33018036)
chr6 (51-111)||(15371895-15371955)
chr6 (51-124)||(15351402-15351475)
chr6 (51-111)||(33921501-33921561)
chr6 (49-124)||(15355588-15355663)
chr6 (51-109)||(15321259-15321317)
chr6 (51-97)||(34803753-34803799)
chr6 (54-111)||(8232343-8232399)
chr6 (51-111)||(2310320-2310380)
chr6 (51-109)||(15325162-15325220)
chr6 (54-111)||(4552927-4552984)
chr6 (54-95)||(8569787-8569828)
chr6 (58-111)||(14312680-14312733)
chr6 (51-119)||(3166132-3166200)
chr6 (51-119)||(7739542-7739610)
[»] chr5 (35 HSPs)
chr5 (54-119)||(15898209-15898274)
chr5 (51-124)||(25111168-25111241)
chr5 (51-124)||(25170259-25170332)
chr5 (51-111)||(25108588-25108648)
chr5 (51-111)||(25167680-25167740)
chr5 (54-125)||(10044686-10044757)
chr5 (54-102)||(13087783-13087831)
chr5 (54-102)||(19889575-19889623)
chr5 (47-111)||(31196330-31196394)
chr5 (51-111)||(42818919-42818978)
chr5 (51-122)||(858350-858421)
chr5 (57-124)||(4044497-4044564)
chr5 (51-102)||(16883973-16884024)
chr5 (51-102)||(25344780-25344831)
chr5 (54-111)||(5357850-5357907)
chr5 (51-124)||(31090319-31090392)
chr5 (54-111)||(39060987-39061044)
chr5 (54-102)||(13016405-13016453)
chr5 (51-102)||(6173022-6173073)
chr5 (51-102)||(7871329-7871379)
chr5 (51-102)||(43525493-43525544)
chr5 (51-97)||(17243001-17243047)
chr5 (51-97)||(17699348-17699394)
chr5 (54-116)||(20189910-20189972)
chr5 (57-111)||(36006925-36006979)
chr5 (51-97)||(36446734-36446780)
chr5 (51-97)||(42211348-42211394)
chr5 (51-96)||(146748-146793)
chr5 (69-102)||(5072983-5073016)
chr5 (51-111)||(791991-792051)
chr5 (54-102)||(7311222-7311270)
chr5 (54-102)||(15564930-15564978)
chr5 (53-97)||(16283634-16283678)
chr5 (55-111)||(16926124-16926180)
chr5 (54-102)||(32659834-32659882)
[»] scaffold0221 (1 HSPs)
scaffold0221 (51-124)||(10810-10883)
[»] scaffold0262 (1 HSPs)
scaffold0262 (51-111)||(12468-12528)
[»] scaffold0155 (1 HSPs)
scaffold0155 (51-102)||(7995-8046)
[»] scaffold0003 (1 HSPs)
scaffold0003 (54-111)||(352493-352550)
[»] scaffold0576 (1 HSPs)
scaffold0576 (49-124)||(578-653)
[»] scaffold0009 (1 HSPs)
scaffold0009 (54-108)||(220011-220065)
[»] scaffold0020 (1 HSPs)
scaffold0020 (54-102)||(171244-171292)


Alignment Details
Target: chr1 (Bit Score: 127; Significance: 1e-65; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 27143056 - 27142862
Alignment:
Q  10 attattctccaaaagcgacaattattgtgaaacgaatggagtactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaa 109  Q
    |||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  27143056 attattctccaaaagcgacaattattatgaagcggatggagtactactttcaccactctca-ttcaatatattttactttacatttatcataaagaagaa 27142958  T
Q  110 tgtatcaatatttgaaccatttttctcc-nnnnnnngtttaatgtgtatgaaatggtcaaccgactgagttaaatagacacgaatgaagtaatatt 204  Q
    ||||||||||||||||||||||||||||        ||||||||||||||||||||||||| |||||||||||| ||||||| ||| |||||||||    
T  27142957 tgtatcaatatttgaaccatttttctccttttttttgtttaatgtgtatgaaatggtcaacggactgagttaaacagacacggatggagtaatatt 27142862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 52382476 - 52382406
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||| ||||    
T  52382476 tactttcaccactctcaattcaatatattttactttacatttatgataaagaagaatgcatcaatacttga 52382406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 27142719 - 27142668
Alignment:
Q  196 agtaatattttgacaaaacatatgatattgtgcattccgtacggacagcttt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27142719 agtaatattttgacaaaacatatgatattgtgcattccgtacggacagcttt 27142668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 12267724 - 12267650
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttgaa 125  Q
    |||||||||||| |||| |||||||||||||| |||||||||||||| |||| |||||||||| ||||| |||||    
T  12267724 tactactttcacaactcccaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgaa 12267650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 26924217 - 26924140
Alignment:
Q  47 ggagtactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||| ||||||||||||||||||||||||||||| |||||| ||||||| |||| |||||||| | ||||| ||||    
T  26924217 ggagtattactttcaccactctcaattcaatatattatactttgcatttatgataaagaagaatgcaccaatagttga 26924140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 46363504 - 46363431
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||| |||| |||||||| | ||||| ||||    
T  46363504 tactacttccaccactctcaattcaatatattttactttgcatttatgataaagaagaatgcaccaatagttga 46363431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 2886186 - 2886246
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||| |||| ||||||||    
T  2886186 tactactttcaccactctcaattcaatatattctactttgcatttatgataaagaagaatg 2886246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 37495842 - 37495917
Alignment:
Q  49 agtactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||||||||| |||| |||||||||||||| |||||||||||||| |||| |||||||| | ||||| ||||    
T  37495842 agtactactttcactactcccaattcaatatattctactttacatttataataaagaagaatgcaccaatacttga 37495917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 10587674 - 10587609
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatca 116  Q
    ||||||||||| |||||||||||||||||||| || ||| ||||||| |||| |||||||||||||    
T  10587674 tactactttcatcactctcaattcaatatattctattttgcatttatgataatgaagaatgtatca 10587609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 29756235 - 29756162
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||| |||| |||||||| | ||||| ||||    
T  29756235 tactactttcaccactcccaattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttga 29756162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 37541206 - 37541133
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||| |||| |||||||| | ||||| ||||    
T  37541206 tactactttcaccacttccaattcaatatattctactttacatttataataaagaagaatgcaccaatagttga 37541133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 24131493 - 24131433
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||| |||| ||||||||    
T  24131493 tactactttcaccactcccaattcaatatattatactttgcatttatgataaagaagaatg 24131433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 50333953 - 50334009
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaat 110  Q
    ||||||||||||||||||||||||||| | |||||||||||||| |||| |||||||    
T  50333953 tactttcaccactctcaattcaatatactctactttacatttatgataaagaagaat 50334009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 2219541 - 2219474
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaat 118  Q
    |||||| ||||| |||  ||||||||||||||||||||||||||||| |||| |||||||| ||||||    
T  2219541 tactacgttcacaacttccaattcaatatattttactttacatttatgataaagaagaatgcatcaat 2219474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 33149288 - 33149347
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaat 110  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||| |||| |||||||    
T  33149288 tactactttcatcactctcaattcaatatattctactttgcatttatgataaagaagaat 33149347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 27210054 - 27210000
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||||||||||||||||| | |||||||||||| |||| ||||||||    
T  27210054 tttcaccactctcaattcaatatattctcctttacatttatgataaagaagaatg 27210000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 27932919 - 27932853
Alignment:
Q  58 ttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||||||||||||||| |||||| ||||||| |||| |||||||| | ||||| ||||    
T  27932919 ttcaccactctcaattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttga 27932853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 37925336 - 37925266
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||||||||||||||||||| |||||| ||||||| |||| ||| |||| | ||||| ||||    
T  37925336 tactttcaccactctcaattcaatatattctactttgcatttatgataaagaaaaatgcaccaataattga 37925266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 705439 - 705382
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||| |||||||||||||||||||||| |||||||||| ||| |||| ||||||||    
T  705439 tacttttaccactctcaattcaatatattatactttacatctatgataaagaagaatg 705382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 5115915 - 5115850
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaata 119  Q
    |||||||||| |||||||||||||||||| ||  |||||||||| |||| |||||||| |||||||    
T  5115915 tactttcacctctctcaattcaatatattctatattacatttatgataaagaagaatgcatcaata 5115850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 4466247 - 4466187
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||||||||  |||| ||||||||| |||||||||||||| |||| ||||||||    
T  4466247 tactactttcaccacttccaatacaatatattctactttacatttatgataaagaagaatg 4466187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 40754506 - 40754446
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||| |||||||||| |||||||| |||||| ||||||| |||| ||||||||    
T  40754506 tactactttcacaactctcaatttaatatattctactttgcatttatgataaagaagaatg 40754446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 51049523 - 51049583
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||| |||| |||||||||||||| |||||||||||||| ||||  |||||||    
T  51049523 tactactttcacaactcccaattcaatatattatactttacatttatgataaaaaagaatg 51049583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 3718942 - 3718891
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||| |||| |||||||||||||||||||| |||||||||||||| ||||    
T  3718942 tactaccttcatcactctcaattcaatatattatactttacatttatgataa 3718891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 21304893 - 21304826
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||||||| ||||||||||||| ||||||| |||||| |||| ||| |||| ||||||| ||||    
T  21304893 tttcaccactcttaattcaatatattatactttatatttatgataaagaaaaatgcatcaatacttga 21304826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 14352584 - 14352654
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||||||||| |||||||||||||| ||||||| |||||  |||| |||||||| | ||||| ||||    
T  14352584 tactttcaccactcccaattcaatatattctactttatatttacgataaagaagaatgcaccaatacttga 14352654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 31798436 - 31798506
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||| ||||||||||||||||||| |||||| ||||||| |||| ||| |||| | ||||| ||||    
T  31798436 tactttcactactctcaattcaatatattctactttgcatttatgataaagaataatgcaccaatagttga 31798506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 37281087 - 37281017
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||| |||| |||||||||||||| |||||||||||||| ||||  ||||||| | ||||| ||||    
T  37281087 tactttcactactcccaattcaatatattctactttacatttatgataaaaaagaatgcaccaatacttga 37281017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 40061827 - 40061897
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||| |||||||||||||||||||| || ||| ||||||| |||| ||| |||||| ||||| ||||    
T  40061827 tactttcatcactctcaattcaatatattctaatttgcatttatgataatgaaaaatgtaacaatacttga 40061897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 2571378 - 2571423
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacattta 96  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||    
T  2571378 tactactttcatcactctcaattcaatatattctactttgcattta 2571423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 16040095 - 16040152
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||||  |||| ||||||||| |||||||||||||| |||| ||||||||    
T  16040095 tactttcaccacttccaatacaatatattctactttacatttatgataaagaagaatg 16040152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 16451646 - 16451687
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttaca 92  Q
    |||||||||||| |||||||||||||||||||| ||||||||    
T  16451646 tactactttcacaactctcaattcaatatatttaactttaca 16451687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 16460799 - 16460840
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttaca 92  Q
    |||||||||||| |||||||||||||||||||| ||||||||    
T  16460799 tactactttcacaactctcaattcaatatatttaactttaca 16460840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 31634388 - 31634318
Alignment:
Q  47 ggagtactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaata 119  Q
    ||||||||||||||| ||||| |||||||  ||||| |||||||||||||| |||| || ||||| |||||||    
T  31634388 ggagtactactttcaacactcccaattca--atattctactttacatttatgataaagaggaatgcatcaata 31634318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 7785367 - 7785299
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaata 119  Q
    ||||||||| | | ||||||||||||||||||| ||||||||||||| |||  | |||||| |||||||    
T  7785367 tactacttttatcgctctcaattcaatatatttcactttacatttatgatagtggagaatgcatcaata 7785299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 11425962 - 11425902
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||| |||  |||| ||||||||| |||||||||||||| |||| ||||||||    
T  11425962 tactactttcactacttccaatacaatatattctactttacatttatgataaagaagaatg 11425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 18186299 - 18186239
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||||||||| ||||||| |||||||||| ||| |||||| ||||  |||||||    
T  18186299 tactactttcaccactcccaattcagtatattttacattatatttatgataaaaaagaatg 18186239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 29225501 - 29225441
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||||||||  |||||||||||||| |||||| ||||||| ||||  |||||||    
T  29225501 tactactttcaccacttccaattcaatatattctactttccatttatgataaaaaagaatg 29225441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 34987967 - 34987935
Alignment:
Q  67 ctcaattcaatatattttactttacatttatca 99  Q
    |||||||||||||||||||||||||||||||||    
T  34987967 ctcaattcaatatattttactttacatttatca 34987935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 36232882 - 36232822
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||||| |  |||||||||||||| ||||||| |||||| |||| ||||||||    
T  36232882 tactactttcaccatttccaattcaatatattctactttatatttatgataaagaagaatg 36232822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 50086024 - 50086084
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||| ||||||||| |  ||||||||||||| |||||||||||||| |||| ||||||||    
T  50086024 tactattttcaccacaccaaattcaatatattctactttacatttatgataaagaagaatg 50086084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 2246370 - 2246319
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    ||||||||||| |||||||||||||| || || |||||||||||||| ||||    
T  2246370 tactactttcatcactctcaattcaacatcttctactttacatttatgataa 2246319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 29225768 - 29225819
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    ||||||||||| ||||| |||||||||||||| |||||| ||||||| ||||    
T  29225768 tactactttcatcactcccaattcaatatattctactttgcatttatgataa 29225819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 34813932 - 34813983
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    ||||||||||| || ||||||||||||||||| |||||| ||||||| ||||    
T  34813932 tactactttcatcattctcaattcaatatattctactttgcatttatgataa 34813983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 45305874 - 45305941
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||| || ||||||||||||||||| |||||| ||||||| |||| |||||||| || |||| ||||    
T  45305874 tttcatcaatctcaattcaatatattctactttgcatttatgataatgaagaatgcataaatacttga 45305941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 5359357 - 5359319
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttaca 92  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  5359357 tactttcaccactctcaaatcaatatattctactttaca 5359319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 5503438 - 5503508
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||| |||||||||||||||||||| ||||||  ||| || |||| |||||||| | ||||| ||||    
T  5503438 tactttcatcactctcaattcaatatattatactttgaattaatgataaagaagaatgcaccaatagttga 5503508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 25842615 - 25842665
Alignment:
Q  52 actactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||||||| || ||||||| ||||||||| |||||||||||||| ||||    
T  25842615 actactttcatcattctcaatgcaatatattctactttacatttatgataa 25842665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 119
Target Start/End: Original strand, 32587786 - 32587848
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaata 119  Q
    ||||| ||||||||||||||||||||| ||||| ||||||| |||| | | |||| |||||||    
T  32587786 tttcatcactctcaattcaatatatttcactttgcatttatgataatggaaaatgcatcaata 32587848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 52146445 - 52146399
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttat 97  Q
    |||||||||||| ||||||||||| | |||||||||||| |||||||    
T  52146445 tactactttcacaactctcaattcgacatattttactttgcatttat 52146399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 50267528 - 50267471
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||| || || ||||||||||||||| ||||||||||||| |||| | ||||||    
T  50267528 tactttcatcattcccaattcaatatatttcactttacatttatgataatggagaatg 50267471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 17342843 - 17342903
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||| | ||||||||||||||||||||| |||||  |||||| |||| | ||||||    
T  17342843 tactacttttatcactctcaattcaatatatttcactttgtatttatgataatggagaatg 17342903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 20988569 - 20988533
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacat 93  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  20988569 tttcaccactcccaattcaatatattctactttacat 20988533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 36467270 - 36467238
Alignment:
Q  69 caattcaatatattttactttacatttatcata 101  Q
    ||||||||||||||| |||||||||||||||||    
T  36467270 caattcaatatatttcactttacatttatcata 36467238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 35998209 - 35998136
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||| ||||    
T  35998209 tactactttcaccactctcaattcaatatattttactttacatttatgataaagaagaatgtaccaatacttga 35998136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 39052993 - 39052920
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||| | ||||| ||||    
T  39052993 tactactttcaccactctcaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttga 39052920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 47277774 - 47277712
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgta 113  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||| |||| ||| ||||||    
T  47277774 tactactttaatcactctcaattcaatatattttactttacatttatgataaagaaaaatgta 47277712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 36047189 - 36047132
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||||||||||||||||||||| |||||| ||||||| |||| ||||||||    
T  36047189 tactttcaccactctcaattcaatatattctactttgcatttatgataaagaagaatg 36047132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 38319926 - 38319999
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||| |||| |||||||| | ||||| ||||    
T  38319926 tactactttcatcactctcaattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttga 38319999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 44633172 - 44633244
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||||||||||| |||||||||||| || ||||||||||||||||||| |||||||| | ||||| ||||    
T  44633172 tactactttcaccactttcaattcaatat-ttctactttacatttatcataaagaagaatgcaccaatacttga 44633244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 48400719 - 48400650
Alignment:
Q  55 actttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||| ||||||||||||||||||| |||||||||||||| |||| |||||||  ||||||| ||||    
T  48400719 actttcacaactctcaattcaatatattctactttacatttatgataaagaagaatacatcaatacttga 48400650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 55360437 - 55360380
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||| |||||||||||||||||||| |||||||||||||| |||| ||||||||    
T  55360437 tactttcatcactctcaattcaatatattgtactttacatttatgataaagaagaatg 55360380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 53848658 - 53848712
Alignment:
Q  48 gagtactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||||||||||| |||||||||||||||||||| |||||| ||||||| ||||    
T  53848658 gagtactactttcatcactctcaattcaatatattctactttgcatttatgataa 53848712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 42132831 - 42132896
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaata 119  Q
    |||||||||||||  |||||||||||||| |||||| ||||||| |||| |||||||| |||||||    
T  42132831 tactttcaccacttccaattcaatatattctactttgcatttatgataaagaagaatgcatcaata 42132896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 52677120 - 52677055
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaata 119  Q
    |||||||| ||||||||||| ||||||||||||||||||||||| |||| ||  |||| |||||||    
T  52677120 tactttcatcactctcaatttaatatattttactttacatttatgataatgataaatgcatcaata 52677055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 11583960 - 11583912
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||||| ||||||||||| ||||||||||||||||||||||| ||||    
T  11583960 tactttcatcactctcaatttaatatattttactttacatttataataa 11583912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 49401689 - 49401745
Alignment:
Q  69 caattcaatatattttactttacatttatcataacgaagaatgtatcaatatttgaa 125  Q
    |||||||||||||| |||||||||||||| |||| ||| |||||||||||| |||||    
T  49401689 caattcaatatattctactttacatttataataaagaacaatgtatcaatacttgaa 49401745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 22020602 - 22020551
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||||| ||||    
T  22020602 tactactttcaccattctcaattcaatatattctactttgcatttatgataa 22020551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 29550819 - 29550768
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||||||||| |||| |||||||||||||| |||||||||||||| ||||    
T  29550819 tactactttcacaactcccaattcaatatattctactttacatttatgataa 29550768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 32949935 - 32949868
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||| ||||||||||||||||||| |||||||||||||| |||| ||| |||| | ||||| ||||    
T  32949935 tttcactactctcaattcaatatattctactttacatttatgataaagaaaaatgcaccaatagttga 32949868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 33093545 - 33093494
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttatcataacgaaga 108  Q
    |||||||||||||||||||||||||  |||||||||||||| |||| |||||    
T  33093545 tttcaccactctcaattcaatatatcctactttacatttatgataaagaaga 33093494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 29644370 - 29644416
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttat 97  Q
    ||||||||||| || ||||||||||||||||| ||||||||||||||    
T  29644370 tactactttcatcattctcaattcaatatattctactttacatttat 29644416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 38160241 - 38160171
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||| | ||||||||||||||||||||| |||||  |||||| |||| | |||||| ||||||||||||    
T  38160241 tacttttatcactctcaattcaatatatttcactttgtatttatgataatggagaatgcatcaatatttga 38160171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 3505740 - 3505788
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    ||||||||| | ||||||||||||||||| |||||||||||||| ||||    
T  3505740 tactttcactaatctcaattcaatatattctactttacatttatgataa 3505788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 10099817 - 10099757
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||| |||| |||||||||||||| ||||||| |||||| |||| ||| ||||    
T  10099817 tactactttcacaactcccaattcaatatattctactttaaatttatgataaagaaaaatg 10099757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 30680523 - 30680471
Alignment:
Q  58 ttcaccactctcaattcaatatattttactttacatttatcataacgaagaat 110  Q
    ||||||||||  |||| |||||||| ||||||||||||||||||| |||||||    
T  30680523 ttcaccactcctaatttaatatattatactttacatttatcataaagaagaat 30680471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 37316014 - 37315954
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||||||||| |||||||| ||||| |||||| ||||||| |||| ||| ||||    
T  37316014 tactactttcaccactcccaattcaacatattctactttgcatttatgataaagaaaaatg 37315954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 49218871 - 49218823
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| ||||    
T  49218871 tactttcaccactctcaattcaatatattatactttgaatttatgataa 49218823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 8759800 - 8759867
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||| |||| |||||||||||||| |||||| ||||||| |||| ||| |||| ||||||| ||||    
T  8759800 tttcacaactcccaattcaatatattctactttgcatttatgataaagaaaaatgcatcaatagttga 8759867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 37309716 - 37309759
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttat 97  Q
    |||||||| ||||||||||||||||||||| ||||| |||||||    
T  37309716 tactttcatcactctcaattcaatatatttaactttgcatttat 37309759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 43421301 - 43421388
Alignment:
Q  37 tgaaacgaatggagtactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||| | |||||| ||||||||| |||  ||||||||||||||| | ||| ||||||| |||  | |||||||| ||||||||||    
T  43421301 tgaaacggaaggagtaatactttcacaacttccaattcaatatatttcattttgcatttatgatagtggagaatgtaccaatatttga 43421388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 49448856 - 49448907
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    ||||||||||| || ||||||||||||||||| |||||| ||||||| ||||    
T  49448856 tactactttcatcattctcaattcaatatattatactttgcatttatgataa 49448907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 54217361 - 54217416
Alignment:
Q  55 actttcaccactctcaattcaatatattttactttacatttatcataacgaagaat 110  Q
    ||||||||||||| |||||||||||||| |||||| || |||| |||| |||||||    
T  54217361 actttcaccactcccaattcaatatattatactttgcagttatgataaagaagaat 54217416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 22872477 - 22872407
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||| ||||||||||||||||||||  ||||| ||||||| |||| | |||||| | ||||| ||||    
T  22872477 tactttcatcactctcaattcaatatattccactttgcatttatgataatggagaatgcaccaatacttga 22872407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 28330812 - 28330882
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||||||||| |||||||||||| | | |||| ||||||| |||| |||||||| | ||||| ||||    
T  28330812 tactttcaccactcccaattcaatataatctgctttgcatttatgataaagaagaatgcaccaatagttga 28330882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 42051742 - 42051688
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||  ||||||| |||||| |||||||||||||| |||| ||||||||    
T  42051742 tttcaccacttccaattcattatattctactttacatttatgataaagaagaatg 42051688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 20964380 - 20964307
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||||||  |||||| ||||||| |||||| ||||||  |||| |||||||| | ||||| ||||    
T  20964380 tactactttcaccacttccaattcgatatattctactttgcatttacgataaagaagaatgcaccaatagttga 20964307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 35029055 - 35029112
Alignment:
Q  56 ctttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgta 113  Q
    ||||||||||||  |||| ||| |||| |||||||||||||| |||| ||||||||||    
T  35029055 ctttcaccactcctaatttaatttattctactttacatttatgataaagaagaatgta 35029112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 30568680 - 30568720
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttat 97  Q
    ||||| ||||||||||||||||||||| ||||| |||||||    
T  30568680 tttcatcactctcaattcaatatatttcactttgcatttat 30568720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 39976482 - 39976438
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacattt 95  Q
    ||||||||||| ||||||||||||||||||||  ||||| |||||    
T  39976482 tactactttcatcactctcaattcaatatattccactttgcattt 39976438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 83
Target Start/End: Complemental strand, 42185888 - 42185856
Alignment:
Q  51 tactactttcaccactctcaattcaatatattt 83  Q
    ||||||||||| |||||||||||||||||||||    
T  42185888 tactactttcatcactctcaattcaatatattt 42185856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0685 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 6489 - 6419
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||| ||||    
T  6489 tactttcaccactctcaattcaatatattttactttacatttatgataaagaagaatgcatcaatacttga 6419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 35300648 - 35300718
Alignment:
Q  47 ggagtactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaa 117  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  35300648 ggagtactactttcatcactctctattcaatatattttactttacatttatgataacgatgaatgtatcaa 35300718  T

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Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 1334873 - 1334800
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| |||| |||||||| | ||||| ||||    
T  1334873 tactactttcaccactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttga 1334800  T

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Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 29858957 - 29858884
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||| |||| |||||||||| ||||| ||||    
T  29858957 tactactttcaccactcataattcaatatattctactttacatttatgataaagaagaatgtaccaatacttga 29858884  T

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Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 54021550 - 54021477
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||| |||| |||||||| | ||||||||||    
T  54021550 tactactttcaccactccgaattcaatatattctactttacatttataataaagaagaatgcaacaatatttga 54021477  T

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Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 1923105 - 1923165
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||| |||| ||||||||    
T  1923105 tactactttcaccactcccaattcaatatattctactttgcatttatgataaagaagaatg 1923165  T

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Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 41287283 - 41287350
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||| ||||||||||||||||||| |||||||||||||| |||| ||| |||| ||||||| ||||    
T  41287283 tttcacaactctcaattcaatatattctactttacatttatgataaagaataatgcatcaatacttga 41287350  T

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Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 46194298 - 46194247
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||| ||||    
T  46194298 tactactttcaccactctcaattcaatatattctactttgcatttatgataa 46194247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 48409599 - 48409658
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaat 110  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||||| |||| |||||||    
T  48409599 tactactttcaccactcccaattcaacatattctactttacatttatgataaagaagaat 48409658  T

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Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 51164965 - 51165040
Alignment:
Q  49 agtactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||||||||| ||||  ||||||||||||| |||||||||||||| |||| |||||||| | ||||| ||||    
T  51164965 agtactactttcactactccaaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttga 51165040  T

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Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 32977882 - 32977808
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttgaa 125  Q
    |||||||||||| ||||||||||||||||||| ||  |||||||||| |||| ||| |||| ||||||| |||||    
T  32977882 tactactttcacaactctcaattcaatatattctaaattacatttatgataaagaaaaatgcatcaatacttgaa 32977808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 39329842 - 39329782
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||| ||||  |||||||    
T  39329842 tactactttcatcactctcaattcaatatattctactttgcatttatgataagaaagaatg 39329782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 53051041 - 53051101
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||| |||| |||||||||||||| |||||||||||||| ||||  |||||||    
T  53051041 tactactttcacaactcccaattcaatatattatactttacatttatgataaacaagaatg 53051101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 53876525 - 53876482
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttat 97  Q
    |||||||| ||||||||||||||||||||| |||||||||||||    
T  53876525 tactttcatcactctcaattcaatatatttcactttacatttat 53876482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 38600898 - 38600825
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||| ||||| || ||||||||||| ||||||||||||||  ||| |||||||| | ||||| ||||    
T  38600898 tactactttcatcactcccagttcaatatattatactttacatttatggtaaagaagaatgcaccaatacttga 38600825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 9218160 - 9218220
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||| ||||||||||||| |||||| |||||| ||||||| ||||  |||||||    
T  9218160 tactactttcatcactctcaattcattatattctactttgcatttatgataagaaagaatg 9218220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 26134797 - 26134749
Alignment:
Q  49 agtactactttcaccactctcaattcaatatattttactttacatttat 97  Q
    ||||||||||||| ||||| ||||||||||||||| ||||| |||||||    
T  26134797 agtactactttcatcactcccaattcaatatatttcactttgcatttat 26134749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 53754156 - 53754096
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||| || | ||| ||||||||||||| |||||||||||||| |||| ||||||||    
T  53754156 tactacttttactattcttaattcaatatattctactttacatttatgataaagaagaatg 53754096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 8498271 - 8498314
Alignment:
Q  53 ctactttcaccactctcaattcaatatattttactttacattta 96  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||    
T  8498271 ctacttttaccactctcaattcaatatattttactctgcattta 8498314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 47496184 - 47496235
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    ||||||||||| |||||| |||||||||||||  ||||||||||||| ||||    
T  47496184 tactactttcatcactcttaattcaatatattagactttacatttatgataa 47496235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 21585499 - 21585442
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||||  |||| ||||||||| || ||||||||||| |||| ||||||||    
T  21585499 tactttcaccacttccaatacaatatattctattttacatttatgataaagaagaatg 21585442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 48744277 - 48744342
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaata 119  Q
    |||||||| || | |||||||||||||||| ||||||||||||| |||  | |||||| |||||||    
T  48744277 tactttcatcattttcaattcaatatatttcactttacatttatgatagtggagaatgcatcaata 48744342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 3862261 - 3862213
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||||| ||||||||||||| ||||||||| ||| ||||||| ||||    
T  3862261 tactttcatcactctcaattcagtatattttaatttgcatttatgataa 3862213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 27668419 - 27668351
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaata 119  Q
    ||||||||| | |||||| |||||||||||||| ||||| ||||||| |||| ||| |||  |||||||    
T  27668419 tactacttttatcactcttaattcaatatatttcactttgcatttatgataatgaaaaatacatcaata 27668351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 36317392 - 36317352
Alignment:
Q  56 ctttcaccactctcaattcaatatattttactttacattta 96  Q
    ||||||||||||||||||||||||||| | ||||| |||||    
T  36317392 ctttcaccactctcaattcaatatattctgctttatattta 36317352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 50150453 - 50150413
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttat 97  Q
    ||||||||||| ||||| ||||||||||| |||||||||||    
T  50150453 tttcaccactcccaatttaatatattttaatttacatttat 50150413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 11637155 - 11637223
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaata 119  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| ||||||||||||    
T  11637155 tactactttcaccactctcaattcaatatattctactttacatttatgataaagaataatgtatcaata 11637223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 8394366 - 8394274
Alignment:
Q  32 tattgtgaaacgaatggagtactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||  |||||| |||| ||| |||| | ||||| ||||    
T  8394366 tattttgaaacggagggagtactactttcaccactctcaattcaatatattttactttgtatttatgataaagaataatgcaccaatagttga 8394274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 39998178 - 39998238
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||    
T  39998178 tactactttcaccactctcaattcaatatattctactttacatttatgataaagaagaatg 39998238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 8418394 - 8418321
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||| ||||||||||||| |||||| |||||||||||||| |||| ||| |||| ||||||| ||||    
T  8418394 tactactttcatcactctcaattcagtatattctactttacatttatgataaagaataatgcatcaatacttga 8418321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 5878331 - 5878267
Alignment:
Q  38 gaaacgaatggagtactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||| | ||||||||| |||||| ||||||||||||||||||| |||||||||||||| ||||    
T  5878331 gaaacggagggagtactaatttcacaactctcaattcaatatattctactttacatttatgataa 5878267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 14748798 - 14748738
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||||| |||| ||||||||    
T  14748798 tactactttcaccattctcaattcaatatattctactttgcatttatgataaagaagaatg 14748738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 23764987 - 23765038
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttatcataacgaaga 108  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||| |||||    
T  23764987 tttcatcactctcaattcaatatattttactttacatttatgataaagaaga 23765038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 28791323 - 28791397
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttgaa 125  Q
    |||||||||||| |||| |||||||||||||| || ||||||||||| |||| |||||||| | ||||| |||||    
T  28791323 tactactttcacaactcccaattcaatatattctagtttacatttatgataaagaagaatgcaccaatacttgaa 28791397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 32679050 - 32679124
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttgaa 125  Q
    ||||||||| || |||||||||| ||||||||||||||||||||||| |||| ||| |||| | ||||| |||||    
T  32679050 tactacttttacaactctcaatttaatatattttactttacatttatgataaagaataatgcaccaatacttgaa 32679124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 41726536 - 41726610
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttgaa 125  Q
    ||||| |||||| |||| |||||||||||||| |||||||||||||| |||| |||||||| | ||||| |||||    
T  41726536 tactaatttcacaactcccaattcaatatattctactttacatttatgataaagaagaatgcaacaatacttgaa 41726610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 14689975 - 14690048
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||| ||||  ||||||| | ||||| ||||    
T  14689975 tactactttcaccactcccaattcaatatattctactttgcatttatgataaaaaagaatgcaccaatagttga 14690048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 2875178 - 2875110
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaata 119  Q
    |||||||||||   |||| ||||||||||||| |||||| ||||||| |||| ||||||||||||||||    
T  2875178 tactactttcattcctctaaattcaatatattctactttgcatttatgataaggaagaatgtatcaata 2875110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 29638319 - 29638389
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||||  ||||||||||||| |||||||||||||| |||| ||| |||| | ||||| ||||    
T  29638319 tactttcaccactcctaattcaatatattatactttacatttatgataaagaataatgaaccaatacttga 29638389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 40077839 - 40077769
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||| ||||  ||||||||||||| |||||||||||||| |||| |||||||| | ||||| ||||    
T  40077839 tactttcacaactccaaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttga 40077769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 41759719 - 41759649
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||| |||| |||||||||||||||||||||  |||||| |||| |||||||| | ||||| ||||    
T  41759719 tactttcactactcccaattcaatatattttactttgtatttatgataaagaagaatgcaccaataattga 41759649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 27868417 - 27868344
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||| || ||||||||||||||||| |||||| ||||||| |||| ||  |||| ||||||| ||||    
T  27868417 tactactttcatcattctcaattcaatatattctactttgcatttatgataatgataaatggatcaatacttga 27868344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 32231809 - 32231768
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacattt 95  Q
    |||||||||||||| ||||||||||||||||||||| |||||    
T  32231809 tactttcaccactcccaattcaatatattttactttgcattt 32231768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 37459365 - 37459438
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||||||| ||||| ||||||||  ||||| ||||||| |||| |||||||  ||||||| ||||    
T  37459365 tactactttcaccactcccaatttaatatattcaactttgcatttatgataaagaagaatacatcaatagttga 37459438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 2195483 - 2195543
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||| ||||| |||||||||||||| |||||| ||||||| ||||  |||||||    
T  2195483 tactactttcatcactcccaattcaatatattctactttgcatttatgataagaaagaatg 2195543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 4274385 - 4274345
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttat 97  Q
    ||||||||||||||||||||||||||| ||||| |||||||    
T  4274385 tttcaccactctcaattcaatatatttcactttgcatttat 4274345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 14117480 - 14117536
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaat 110  Q
    ||||||||| ||| |||||||||||||||  ||||||||||||| |||| |||||||    
T  14117480 tactttcacaactttcaattcaatatattcaactttacatttatgataaagaagaat 14117536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 33826246 - 33826298
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataac 103  Q
    ||||||||||| || ||||||||||||||||| | |||||||||||| |||||    
T  33826246 tactactttcatcattctcaattcaatatattctgctttacatttatgataac 33826298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 44790514 - 44790468
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttat 97  Q
    |||||||||||||| || ||||||||||||||  |||||||||||||    
T  44790514 tactactttcaccattcccaattcaatatattccactttacatttat 44790468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 119
Target Start/End: Original strand, 45197632 - 45197694
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaata 119  Q
    ||||| ||||||||||||||||||||| | ||||||||||| | |  |||||||| |||||||    
T  45197632 tttcatcactctcaattcaatatatttcattttacatttatgacagtgaagaatgcatcaata 45197694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 45421025 - 45420971
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||   ||||||||||||||||||| ||||||| |||| ||||||||    
T  45421025 tttcaccactcctgattcaatatattttactttgcatttatgataaagaagaatg 45420971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 18725927 - 18725992
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaata 119  Q
    ||||||||  ||||| |||| |||||||| |||||||||||||| |||| ||| |||| |||||||    
T  18725927 tactttcattactcttaattaaatatattctactttacatttataataatgaaaaatgcatcaata 18725992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 25174674 - 25174617
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||| | ||||||||||||||||||| |||||| ||||||| |||| ||| ||||    
T  25174674 tactttccctactctcaattcaatatattctactttgcatttataataaagaataatg 25174617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 29451362 - 29451415
Alignment:
Q  49 agtactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    ||||||||||||| ||| |||||||||||||||| ||||||  |||||| ||||    
T  29451362 agtactactttcatcaccctcaattcaatatattatactttggatttatgataa 29451415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 42412475 - 42412406
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatat 120  Q
    ||||||||||| ||||| ||||||||||||||  ||||| ||||||| |||| | |||||| | ||||||    
T  42412475 tactactttcatcactcccaattcaatatattccactttgcatttatgataatggagaatgcaccaatat 42412406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 17005963 - 17006011
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||||| ||||| |||||||||||||| |||||| ||||||| ||||    
T  17005963 tactttcatcactcccaattcaatatattctactttgcatttatgataa 17006011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 17571285 - 17571237
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||||| ||||| |||||||||||||| |||||| ||||||| ||||    
T  17571285 tactttcatcactcccaattcaatatattctactttgcatttatgataa 17571237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 44615451 - 44615411
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttat 97  Q
    ||||| |||||||||||||||||||| |||||| |||||||    
T  44615451 tttcatcactctcaattcaatatattctactttgcatttat 44615411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 2849270 - 2849343
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||| | ||||| ||||    
T  2849270 tactactttcaccactctcaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttga 2849343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 38589749 - 38589822
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| |||| |||||||| | ||||| ||||    
T  38589749 tactactttcaccactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatagttga 38589822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 32775998 - 32776058
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| |||| ||||||||    
T  32775998 tactactttcaccactcccaattcaatatattctactttacatttatgataaagaagaatg 32776058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 6838083 - 6838137
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| ||||||||    
T  6838083 tttcaccactctcaattcaatatattttactttatatttatgataaagaagaatg 6838137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 45218250 - 45218176
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttgaa 125  Q
    |||||||||||| |||| |||||||||||||| |||||||||||||| |||| |||||||| | ||||| |||||    
T  45218250 tactactttcacaactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgaa 45218176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 9602876 - 9602944
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaata 119  Q
    ||||||||||||||||||||||||||||| || |||||| ||||||| ||||  ||||||| |||||||    
T  9602876 tactactttcaccactctcaattcaatatgttctactttgcatttatgataaaaaagaatgcatcaata 9602944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 9830447 - 9830515
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaata 119  Q
    ||||||||||||||||||||||||||||| || |||||| ||||||| ||||  ||||||| |||||||    
T  9830447 tactactttcaccactctcaattcaatatgttctactttgcatttatgataaaaaagaatgcatcaata 9830515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 37496489 - 37496429
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||| ||||  |||||||    
T  37496489 tactactttcatcactctcaattcaatatattctactttacatttatgataagaaagaatg 37496429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 21412127 - 21412077
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  21412127 tactactttcacca-tctcaattcaatatattttactttacatttatgataa 21412077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 18731457 - 18731527
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||||||||  |||||||||||||| |||||||||||||| |||| |||||||  ||||||| ||||    
T  18731457 tactttcaccacttccaattcaatatattctactttacatttatgataaagaagaattcatcaatacttga 18731527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 34064233 - 34064290
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||| |||||||||||||||||||| |||||||||||||| ||||  |||||||    
T  34064233 tactttcatcactctcaattcaatatattctactttacatttatgataagaaagaatg 34064290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 36070120 - 36070193
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||| ||||||||||||| |||||| |||||||| ||||| |||| ||| |||| | ||||||||||    
T  36070120 tactactttcatcactctcaattcagtatattctactttacgtttatgataaagaataatgcaccaatatttga 36070193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 37264328 - 37264401
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||| |||| ||  |||| ||||||| ||||    
T  37264328 tactactttcaccactcccaattcaatatattctactttgcatttatgataaagagcaatgcatcaatacttga 37264401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 3667966 - 3667918
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||||| |||||||||||||||||||| |||||||||||||| ||||    
T  3667966 tactttcatcactctcaattcaatatattctactttacatttatgataa 3667918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 5068387 - 5068339
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| ||||    
T  5068387 tactttcaccactcttaattcaatatattctactttacatttatgataa 5068339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 30459083 - 30459150
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||| || ||||||||||||||||| || ||||||||||| |||| ||| |||| ||||||||||||    
T  30459083 tttcagcattctcaattcaatatattctattttacatttattataaagaataatgcatcaatatttga 30459150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 39343763 - 39343704
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaat 110  Q
    ||||| |||||||||||  ||||||||||||| |||||||||||||| |||| |||||||    
T  39343763 tactattttcaccactccaaattcaatatattctactttacatttatgataaagaagaat 39343704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 27337962 - 27337892
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||| ||||||| |||||||||||||| |||||||||||||| |||| ||| |||| | ||||| ||||    
T  27337962 tacttttaccactcccaattcaatatattatactttacatttatgataaagaataatgcaccaatacttga 27337892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 2842144 - 2842071
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||| |||||| |||||||||||||| ||||| ||||||| |||  | |||||| ||||||| ||||    
T  2842144 tactactttcatcactctaaattcaatatatttcactttgcatttatgatagtggagaatgcatcaatacttga 2842071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 25778759 - 25778832
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||| ||||  ||||||||||||||||||||| ||||||| ||||  | ||||||| ||||| ||||    
T  25778759 tactactttcatcacttccaattcaatatattttactttgcatttatgataagaaggaatgtaccaatacttga 25778832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 28333189 - 28333254
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaata 119  Q
    |||||||| ||||| |||||||||||||| |||||||||||||| ||||  || |||| |||||||    
T  28333189 tactttcatcactcccaattcaatatattctactttacatttatgataagaaataatgcatcaata 28333254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 24288455 - 24288498
Alignment:
Q  68 tcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||    
T  24288455 tcaattcaatatattctactttacatttatgataaagaagaatg 24288498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 30462675 - 30462726
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    ||||| ||||| |||||||||||||||||||| || ||||||||||| ||||    
T  30462675 tactaatttcatcactctcaattcaatatattatattttacatttatgataa 30462726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 32972107 - 32972064
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttat 97  Q
    |||||||||||||| |||||||||||||| |||||| |||||||    
T  32972107 tactttcaccactcacaattcaatatattctactttgcatttat 32972064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 30659572 - 30659514
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaa 109  Q
    ||||||||||||||||   ||||||||||||| ||||||| |||||| |||| ||||||    
T  30659572 tactactttcaccacttcaaattcaatatattctactttatatttatgataaagaagaa 30659514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 43007915 - 43007969
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||||||||||||||||| || |||| |||||| |||| ||| ||||    
T  43007915 tttcaccactctcaattcaatatattctaatttaaatttatgataaagaaaaatg 43007969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 46095512 - 46095466
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttat 97  Q
    ||||||||| | ||||||||||||||||||||| ||||| |||||||    
T  46095512 tactacttttatcactctcaattcaatatatttcactttgcatttat 46095466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 10355824 - 10355776
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||| |||| ||||||||||||||||| |||||| ||||||| ||||    
T  10355824 tacttttaccattctcaattcaatatattctactttgcatttatgataa 10355776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 14649008 - 14648960
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||||| |||||||||||||||||||| ||| || ||||||| ||||    
T  14649008 tactttcatcactctcaattcaatatattctaccttgcatttatgataa 14648960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 29997121 - 29997061
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||| | || ||| |||||||||| |||||| ||||||| |||| ||||||||    
T  29997121 tactactttcacaattcccaactcaatatattatactttgcatttatgataaagaagaatg 29997061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 47238232 - 47238292
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||||||||||||  |||| || || |||||| ||||||| |||| ||||||||    
T  47238232 tactactttcaccactctcatctcaacattttgtactttgcatttatgataaagaagaatg 47238292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 9472437 - 9472510
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||||||||||| ||||||||||||||| |||| ||||||||| |||| |||||||||||||||| ||||    
T  9472437 tactactttcaccactatcaattcaatatattctactatacatttatgataaagaagaatgtatcaatacttga 9472510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 7931588 - 7931528
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||    
T  7931588 tactactttcacaactctcaattcaatatattttactttacatttatgataaagaagaatg 7931528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 7213490 - 7213563
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||||||| |||||||||||||||||||  ||||||||||||| |||| |||||||| | ||||||||||    
T  7213490 tactactttcacaactctcaattcaatatattccactttacatttataataaagaagaatgcaccaatatttga 7213563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 28844077 - 28844133
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaat 110  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||    
T  28844077 tactttcaccactctcaattcaatatattatactttacatttatgataaagaagaat 28844133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 24356126 - 24356200
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttgaa 125  Q
    |||||||||||| |||| |||||||| ||||| |||||||||||||| |||| |||||||| ||||||| |||||    
T  24356126 tactactttcacgactcccaattcaacatattctactttacatttatgataaagaagaatgcatcaatacttgaa 24356200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 18460516 - 18460576
Alignment:
Q  64 actctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||||||||| |||||||||||||| | || |||||||||| ||||||||||    
T  18460516 actctcaattcaatatattctactttacatttatgacaaagaagaatgtaccaatatttga 18460576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 26273774 - 26273845
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatattt 122  Q
    ||||||||||| ||||| |||||||||||||| |||||| ||||||| |||| ||  |||||||||||||||    
T  26273774 tactactttcatcactcccaattcaatatattctactttgcatttatgataatgataaatgtatcaatattt 26273845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 4283111 - 4283038
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||| |||| || ||||| | ||||| ||||    
T  4283111 tactacttttaccactctcaattcaatatattctattttacatttatgataaagaggaatgcaccaatacttga 4283038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 6972629 - 6972572
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||| |||||||||||||||||||||| |||||| ||||||| |||| ||||||||    
T  6972629 tacttttaccactctcaattcaatatattctactttgcatttatgataaagaagaatg 6972572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 2427375 - 2427435
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||| | || ||||||||    
T  2427375 tactactttcaccactcccaattcaatatattctactttgcatttatgacaaagaagaatg 2427435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 13222086 - 13222142
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaat 110  Q
    |||||||||||||  ||||||||||||||||||||| ||||||| |||| |||||||    
T  13222086 tactttcaccacttccaattcaatatattttactttgcatttatgataaagaagaat 13222142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 14384370 - 14384310
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||  |||||||||||||||||||| |||||||||||||| |||| || |||||    
T  14384370 tactactttcttcactctcaattcaatatattatactttacatttatgataatgatgaatg 14384310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 3199913 - 3199964
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||| ||||    
T  3199913 tactactttcaccactcccaattcaatatattatactttgcatttatgataa 3199964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 36748163 - 36748214
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||||||||| | ||||||||||||||||||||||||| |||||| ||||    
T  36748163 tactactttcacaattctcaattcaatatattttactttaaatttatgataa 36748214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 39166785 - 39166726
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgta 113  Q
    ||||||||| |||| |||||||||||||| |||||||||||||| ||||  |||||||||    
T  39166785 tactttcactactcccaattcaatatattatactttacatttatgataaaaaagaatgta 39166726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 435170 - 435124
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttat 97  Q
    ||||||||||| || |||||||||||||||||| |||||||||||||    
T  435170 tactactttcatcattctcaattcaatatatttcactttacatttat 435124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 1908580 - 1908526
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||  |||||||||||||| |||||||||||||| |||| ||||||||    
T  1908580 tttcaccacttccaattcaatatattctactttacatttatgataaagaagaatg 1908526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 23684974 - 23685020
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttat 97  Q
    ||||||||||| ||||||||||||||||||||| ||||| |||||||    
T  23684974 tactactttcatcactctcaattcaatatatttcactttgcatttat 23685020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 28301449 - 28301495
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttat 97  Q
    ||||||||||| ||||||||||||||||||||| ||||| |||||||    
T  28301449 tactactttcatcactctcaattcaatatatttcactttgcatttat 28301495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 38873012 - 38872941
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||||||| ||||||||||||  |||||||| |||||| |||| || ||||| ||||||| ||||    
T  38873012 tactactttcaccactcccaattcaatata--ttactttatatttatgataaagaggaatgcatcaatagttga 38872941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 4794588 - 4794661
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||| |||| |||||||||||||||  ||||| ||||||| ||||  || |||| ||||||||||||    
T  4794588 tactactttcatcactttcaattcaatatattccactttgcatttatgataataaaaaatgcatcaatatttga 4794661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 314459 - 314515
Alignment:
Q  68 tcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||||| |||||| ||||||| |||| |||||||| ||||||| ||||    
T  314459 tcaattcaatatattctactttgcatttatgataaagaagaatgcatcaatagttga 314515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 43427178 - 43427118
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||| ||||| |||||||||||||| || ||| ||||||| |||| ||||||||    
T  43427178 tactactttcatcactcccaattcaatatattctattttgcatttatgataaagaagaatg 43427118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 2048313 - 2048380
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||| ||||||||||||||||||| |||||| ||||||| ||||  ||||||| | ||||| ||||    
T  2048313 tttcactactctcaattcaatatattctactttgcatttatgataaacaagaatgcaccaatagttga 2048380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 82
Target Start/End: Original strand, 5711008 - 5711039
Alignment:
Q  51 tactactttcaccactctcaattcaatatatt 82  Q
    ||||||||||||||||||||||||||||||||    
T  5711008 tactactttcaccactctcaattcaatatatt 5711039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 9724911 - 9724966
Alignment:
Q  69 caattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||||||||| |||||||||||||| |||| |||||||| | ||||| ||||    
T  9724911 caattcaatatattctactttacatttatgataaagaagaatgcaccaatacttga 9724966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 928628 - 928557
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||||||||||||  |||||||| || ||| ||||||| |||| |||||||| | ||||| ||||    
T  928628 tactactttcaccactctcaat--aatatattctattttgcatttatgataaagaagaatgcaccaatagttga 928557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 6685751 - 6685709
Alignment:
Q  55 actttcaccactctcaattcaatatattttactttacatttat 97  Q
    ||||||||||||  |||||||||||||| ||||||||||||||    
T  6685751 actttcaccacttccaattcaatatattctactttacatttat 6685709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 92
Target Start/End: Original strand, 33880176 - 33880214
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttaca 92  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  33880176 tactttcaccactcccaattcaatatattctactttaca 33880214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 43182289 - 43182360
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||| ||||||||||  |||||||||||||| |||  ||||||||| |||| |||||||| | ||||||||||    
T  43182289 tactattttcaccacttccaattcaatatattatac--tacatttataataaagaagaatgcaccaatatttga 43182360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 3487412 - 3487453
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacattt 95  Q
    |||||||| |||||||||||||||||||| |||||| |||||    
T  3487412 tactttcatcactctcaattcaatatattctactttgcattt 3487453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 19515896 - 19515969
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||||||  |||  ||||||||||||||||||||| ||||||| |||| ||| |||| | ||||| ||||    
T  19515896 tactactttcattacttacaattcaatatattttactttgcatttatgataatgaaaaatgaaccaatacttga 19515969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 39095649 - 39095714
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaata 119  Q
    |||||||| ||||  ||||||||||||||  ||||| ||||||| |||| | ||||||||||||||    
T  39095649 tactttcatcactgacaattcaatatattccactttgcatttatgataatggagaatgtatcaata 39095714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 43056408 - 43056464
Alignment:
Q  69 caattcaatatattttactttacatttatcataa-cgaagaatgtatcaatatttgaa 125  Q
    |||||||||||||| |||||||||||||| |||| || | ||||||||||||||||||    
T  43056408 caattcaatatattatactttacatttatgataatcgta-aatgtatcaatatttgaa 43056464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 44424355 - 44424282
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||| || |||||||||||||||||  ||||| ||||||| ||||  || |||| ||||||| ||||    
T  44424355 tactactttcatcattctcaattcaatatattcaactttgcatttatgataataaaaaatgcatcaatacttga 44424282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 734101 - 734053
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||||| ||||| ||| ||||||||||||||| ||||||||| ||||    
T  734101 tactttcatcactcccaactcaatatattttactatacatttatgataa 734053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 8550734 - 8550674
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||| |||||| |||||||||||||  ||||| ||||||| |||| | ||||||    
T  8550734 tactactttcatcactcttaattcaatatattagactttgcatttatgataatggagaatg 8550674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 10069674 - 10069626
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||||| ||||||||||||||||||||  ||||| ||||||| ||||    
T  10069674 tactttcatcactctcaattcaatatattcgactttgcatttatgataa 10069626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 37529160 - 37529112
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||||||||||  ||||||||| |||| |||||||||||||| ||||    
T  37529160 tactttcaccacttccaattcaatttattctactttacatttatgataa 37529112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 41436094 - 41436162
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaata 119  Q
    ||||||||||| || |||||||||||||||||  ||||| ||||||| |||  |||||||  |||||||    
T  41436094 tactactttcatcattctcaattcaatatattccactttgcatttatgatagtgaagaatacatcaata 41436162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 5833 - 5906
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||  |||| ||||||| ||||    
T  5833 tactactttcaccactctcaattcaatatattctactttacatttatgataaagagcaatgcatcaatacttga 5906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 33018036 - 33017963
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| |||| |||||||| | ||||| ||||    
T  33018036 tactactttcaccactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttga 33017963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 15371955 - 15371895
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||| |||| ||||||||    
T  15371955 tactactttcaccactcccaattcaatatattctactttgcatttatgataaagaagaatg 15371895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 15351475 - 15351402
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||| |||||||||||||||||| ||| || ||||||| |||| |||||| | ||||||| ||||    
T  15351475 tactactttcaccgctctcaattcaatatattctaccttgcatttatgataaagaagaacgcatcaatagttga 15351402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 33921561 - 33921501
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||| || |||| |||||||||||||| |||||||||||||| |||| ||||||||    
T  33921561 tactacttttacaactcccaattcaatatattctactttacatttatgataaagaagaatg 33921501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 15355588 - 15355663
Alignment:
Q  49 agtactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||| ||||||||||||| |||||| ||||||  |||||| |||| |||||||| | ||||| ||||    
T  15355588 agtactactttcaacactctcaattcattatattctactttggatttatgataaagaagaatgcaccaatagttga 15355663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 15321317 - 15321259
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaa 109  Q
    ||||||||||| || ||||||||||||||||| |||||| ||||||| |||| ||||||    
T  15321317 tactactttcaacattctcaattcaatatattctactttgcatttatgataaagaagaa 15321259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 34803799 - 34803753
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttat 97  Q
    |||||||||||| |||||||||||||||||||||| ||| |||||||    
T  34803799 tactactttcacaactctcaattcaatatattttattttgcatttat 34803753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 8232399 - 8232343
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||| | |||||||||||||||||| ||||||||||||| |||| ||||||||    
T  8232399 tactttcacaagtctcaattcaatatattt-actttacatttatgataaagaagaatg 8232343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 2310380 - 2310320
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||| ||||| |||||||||||||| ||| || ||||||| |||| ||||||||    
T  2310380 tactactttcatcactcccaattcaatatattataccttgcatttatgataaagaagaatg 2310320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 109
Target Start/End: Original strand, 15325162 - 15325220
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaa 109  Q
    ||||| |||||||||||||||| ||||||||| |||||| ||||||  |||| ||||||    
T  15325162 tactagtttcaccactctcaatccaatatattctactttgcatttacgataaagaagaa 15325220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 4552927 - 4552984
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||||| ||||| |||||||| || ||| ||||||| |||| ||||||||    
T  4552927 tactttcaccactcccaatttaatatattctaatttgcatttatgataaagaagaatg 4552984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 8569828 - 8569787
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacattt 95  Q
    |||||||||||||||||||| ||||||||| ||||| |||||    
T  8569828 tactttcaccactctcaatttaatatatttcactttgcattt 8569787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 14312733 - 14312680
Alignment:
Q  58 ttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||| |||||||||||||||| |||| ||||||||||||| |||| | ||||||    
T  14312733 ttcatcactctcaattcaatacatttcactttacatttatgataatggagaatg 14312680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 3166200 - 3166132
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaata 119  Q
    |||||||||||||| ||   |||||||||||| |||||||||||||| |||| ||| |||  |||||||    
T  3166200 tactactttcaccaatcctcattcaatatattctactttacatttatgataaagaaaaatacatcaata 3166132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 7739610 - 7739542
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaata 119  Q
    ||||||||| | || |||||||||||||| || |||||||||||||| |||| |  ||||| |||||||    
T  7739610 tactacttttatcattctcaattcaatatcttctactttacatttataataatggtgaatgcatcaata 7739542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 15898209 - 15898274
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaata 119  Q
    ||||||||||||||||||||||||||||| |||||| ||||||| |||| |||||||| |||||||    
T  15898209 tactttcaccactctcaattcaatatattctactttgcatttatgataaagaagaatgcatcaata 15898274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 25111241 - 25111168
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||| |||| |||||||| | ||||| ||||    
T  25111241 tactactttcaccacttccaattcaatatattctactttacatttatgataaagaagaatgcagcaatacttga 25111168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 25170332 - 25170259
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||| |||| |||||||| | ||||| ||||    
T  25170332 tactactttcaccacttccaattcaatatattctactttacatttatgataaagaagaatgcagcaatacttga 25170259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 25108588 - 25108648
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||| |||| ||||||||    
T  25108588 tactactttcaccacttccaattcaatatattatactttacatttatgataaagaagaatg 25108648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 25167680 - 25167740
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||| |||| ||||||||    
T  25167680 tactactttcaccacttccaattcaatatattatactttacatttatgataaagaagaatg 25167740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 10044686 - 10044757
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttgaa 125  Q
    ||||||||| |||||||| |||||||| |||||||||||||||| ||||  ||||||| ||||||| |||||    
T  10044686 tactttcacaactctcaaatcaatatactttactttacatttatgataaaaaagaatgcatcaatacttgaa 10044757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 13087831 - 13087783
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    ||||||||||||||||||||||||||||| |||||| ||||||| ||||    
T  13087831 tactttcaccactctcaattcaatatattctactttgcatttatgataa 13087783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 19889623 - 19889575
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| ||||    
T  19889623 tactttcaccactttcaattcaatatattctactttacatttatgataa 19889575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 31196330 - 31196394
Alignment:
Q  47 ggagtactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||||||||||||||||| ||||||||| |||||| ||| ||| |||| ||| ||||    
T  31196330 ggagtactactttcaccactctcaatccaatatattctactttgcatgtataataaagaaaaatg 31196394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 42818919 - 42818978
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||| |||||||||||||| ||||||||||| |||||||||||||| |||| ||||||||    
T  42818919 tactattttcaccactctca-ttcaatatattctactttacatttatgataaagaagaatg 42818978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 858350 - 858421
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatattt 122  Q
    ||||||||||| ||||||||||| ||||||||| | ||| ||||||| |||| | |||||||| ||||||||    
T  858350 tactactttcatcactctcaattaaatatatttcattttgcatttatgataatggagaatgtaccaatattt 858421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 4044564 - 4044497
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||| | |||||||||||||| |||||||||||||| |||| |||||||| | ||||| ||||    
T  4044564 tttcaccacacccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttga 4044497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 16884024 - 16883973
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    ||||||||||||||| |  |||||||||||||||||||||||||||| ||||    
T  16884024 tactactttcaccacccctaattcaatatattttactttacatttatgataa 16883973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 25344831 - 25344780
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    ||||||||||| || ||||||||||||||||| |||||||||||||| ||||    
T  25344831 tactactttcatcattctcaattcaatatattctactttacatttatgataa 25344780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 5357907 - 5357850
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||||  |||| ||||||||| |||||||||||||| |||| ||||||||    
T  5357907 tactttcaccacttccaatacaatatattctactttacatttatgataaagaagaatg 5357850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 31090319 - 31090392
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||| |||||||||||| ||||||| |||||| | ||||| |||| |||||||| | ||||| ||||    
T  31090319 tactactttcaacactctcaattccatatattctactttgcgtttatgataaagaagaatgcaccaatagttga 31090392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 39061044 - 39060987
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||||||  ||||||||||||| |||||| ||||||| |||| ||||||||    
T  39061044 tactttcaccactcctaattcaatatattctactttgcatttatgataaagaagaatg 39060987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 13016453 - 13016405
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||||||||||| |||||||||||||| |||||| ||||||| ||||    
T  13016453 tactttcaccactcccaattcaatatattctactttgcatttatgataa 13016405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 6173073 - 6173022
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    ||||||||||| ||||| |||||||||||||| |||||| ||||||| ||||    
T  6173073 tactactttcatcactcacaattcaatatattatactttgcatttatgataa 6173022  T

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Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 7871329 - 7871379
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||||| ||||    
T  7871329 tactactttcaccactc-caatttaatatattctactttacatttatgataa 7871379  T

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Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 43525493 - 43525544
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    ||||||||||||||||  |||||||| ||||| |||||||||||||| ||||    
T  43525493 tactactttcaccacttccaattcaacatattatactttacatttatgataa 43525544  T

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Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 17243047 - 17243001
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttat 97  Q
    ||||||||||| ||||||||||||||||||||  ||||| |||||||    
T  17243047 tactactttcatcactctcaattcaatatattccactttgcatttat 17243001  T

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Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 17699348 - 17699394
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttat 97  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  17699348 tactactttcattactctcaattcaatatattataccttacatttat 17699394  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 20189910 - 20189972
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatca 116  Q
    |||||||| || |||||||||||||||||  ||||||||||||| |||| | |||||| ||||    
T  20189910 tactttcatcattctcaattcaatatattccactttacatttatgataatggagaatgcatca 20189972  T

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Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 36006979 - 36006925
Alignment:
Q  57 tttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||||  ||||||| |||||| |||||||||||||| |||| ||||||||    
T  36006979 tttcaccacttccaattcagtatattctactttacatttatgataaagaagaatg 36006925  T

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Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 36446780 - 36446734
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttat 97  Q
    ||||||||||| |||| ||||||||||||||| |||||| |||||||    
T  36446780 tactactttcatcactttcaattcaatatattatactttgcatttat 36446734  T

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Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 42211348 - 42211394
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttat 97  Q
    ||||||||||| ||||| ||||||||||||||| ||||| |||||||    
T  42211348 tactactttcatcactcacaattcaatatatttcactttgcatttat 42211394  T

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Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 146793 - 146748
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacattta 96  Q
    ||||||||| | |||||||||||||||||||| |||||| ||||||    
T  146793 tactacttttatcactctcaattcaatatattctactttgcattta 146748  T

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Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 102
Target Start/End: Original strand, 5072983 - 5073016
Alignment:
Q  69 caattcaatatattttactttacatttatcataa 102  Q
    ||||||||||||||||||||||||||||| ||||    
T  5072983 caattcaatatattttactttacatttatgataa 5073016  T

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Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 791991 - 792051
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||||||||  ||||||||||||| || ||| ||||||| |||| || |||||    
T  791991 tactactttcaccactcataattcaatatattctattttgcatttataataaagaggaatg 792051  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 7311270 - 7311222
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||||| |||||| ||||||||||||| |||||| ||||||| ||||    
T  7311270 tactttcatcactcttaattcaatatattctactttgcatttatgataa 7311222  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 15564978 - 15564930
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||||| ||||||||||| |||||||| |||||| ||||||| ||||    
T  15564978 tactttcatcactctcaatttaatatattctactttgcatttatgataa 15564930  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 16283678 - 16283634
Alignment:
Q  53 ctactttcaccactctcaattcaatatattttactttacatttat 97  Q
    ||||||||| ||||||||||||||||||||  ||||| |||||||    
T  16283678 ctactttcatcactctcaattcaatatattccactttgcatttat 16283634  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 16926180 - 16926124
Alignment:
Q  55 actttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||| |||  |||||||||||||| |||||| ||||||| |||| ||||||||    
T  16926180 actttcacaacttccaattcaatatattctactttccatttatgataaagaagaatg 16926124  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 32659834 - 32659882
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||| |||| ||||||||||||||||| |||||| ||||||| ||||    
T  32659834 tacttttaccagtctcaattcaatatattatactttgcatttataataa 32659882  T

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Target: scaffold0221 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 10883 - 10810
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    |||||||||||||||||  |||||||||||||||||||| ||||||| |||| |||||||| | ||||| ||||    
T  10883 tactactttcaccactcctaattcaatatattttactttgcatttatgataaagaagaatgaaccaatagttga 10810  T

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Target: scaffold0262 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 12528 - 12468
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    |||||||||||||| ||| ||||||||||||| |||||||||||||| |||| ||||||||    
T  12528 tactactttcaccattcttaattcaatatattctactttacatttataataaagaagaatg 12468  T

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Target: scaffold0155 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 8046 - 7995
Alignment:
Q  51 tactactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||||||||| | |||||||||||||||||||||||||||||||| ||||    
T  8046 tactactttcacaattctcaattcaatatattttactttacatttatgataa 7995  T

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Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 352550 - 352493
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatg 111  Q
    ||||||||| |||| |||||||||||||| |||||||||||||| |||| ||||||||    
T  352550 tactttcactactcccaattcaatatattctactttacatttatgataaagaagaatg 352493  T

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Target: scaffold0576 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 578 - 653
Alignment:
Q  49 agtactactttcaccactctcaattcaatatattttactttacatttatcataacgaagaatgtatcaatatttga 124  Q
    ||||||||||||| ||||||||||||| |||||| ||||||  |||||| |||| |||||||| | ||||| ||||    
T  578 agtactactttcaacactctcaattcattatattctactttggatttatgataaagaagaatgcaccaatagttga 653  T

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Target: scaffold0009 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 220011 - 220065
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataacgaaga 108  Q
    ||||||||||||||||||||||||||||| || ||| ||||||| |||| |||||    
T  220011 tactttcaccactctcaattcaatatattctattttgcatttatgataaagaaga 220065  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 171244 - 171292
Alignment:
Q  54 tactttcaccactctcaattcaatatattttactttacatttatcataa 102  Q
    |||||||| |||||  ||||||||||||| |||||||||||||| ||||    
T  171244 tactttcatcactcctaattcaatatattctactttacatttatgataa 171292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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