View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2505_high_30 (Length: 237)
Name: NF2505_high_30
Description: NF2505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2505_high_30 |
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Alignment Details
Target: chr6 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 30 - 220
Target Start/End: Complemental strand, 5705103 - 5704913
Alignment:
| Q |
30 |
ttttgttgaaatatttgtcatttctacttactttccatggtgtgatcaaggtgagcagttaagagaataggaagaataaaaaattcaattaatcatactg |
129 |
Q |
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| T |
5705103 |
ttttgttgaaatatttgtcatttctacttactttccatggtgtgatcaaggtgagcagttaaaagaataggaagaataaaaaattcaattaatcatactg |
5705004 |
T |
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| Q |
130 |
tgctaattaccctaatatattattgtgcactaacccacgctttgtaagacaccaatatatacataacaaattcttgttaaagtaggtgtta |
220 |
Q |
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| T |
5705003 |
tgctaattaccctaatatattattgtgcactcacccacgctttgtaagacaccaatatatacataacaaattcttgttaaagtaggtgtta |
5704913 |
T |
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