View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2505_high_8 (Length: 391)
Name: NF2505_high_8
Description: NF2505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2505_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 353; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 29 - 381
Target Start/End: Complemental strand, 972548 - 972196
Alignment:
| Q |
29 |
tattaatgagactaagtatatttaaaacctttttataaaatgaacatggtatgtttgaaaaccatatgtaaaatgaggagatataggtggctcatagaaa |
128 |
Q |
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| T |
972548 |
tattaatgagactaagtatatttaaaacctttttataaaatgaacatggtatgtttgaaaaccatatgtaaaatgaggagatataggtggctcatagaaa |
972449 |
T |
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| Q |
129 |
aatgtgcatgtgtggaattatatatgaagtttcttgaaaaagaaatgcaacaagtggatattaattaaaagctgtcaaatggtgcacattttattgataa |
228 |
Q |
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| T |
972448 |
aatgtgcatgtgtggaattatatatgaagtttcttgaaaaagaaatgcaacaagtggatattaattaaaagctgtcaaatggtgcacattttattgataa |
972349 |
T |
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| Q |
229 |
gcaaaaagtagcaacaaaaatattaaataggtgtcatgtgttcaagtaagaccatgttctttggttgagaataaaagtgatgtgcatgttagacttcaca |
328 |
Q |
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| T |
972348 |
gcaaaaagtagcaacaaaaatattaaataggtgtcatgtgttcaagtaagaccatgttctttggttgagaataaaagtgatgtgcatgttagacttcaca |
972249 |
T |
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| Q |
329 |
tataaaaagactattgtctttgatgatacaatggaaaattgatgcctttgctt |
381 |
Q |
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| T |
972248 |
tataaaaagactattgtctttgatgatacaatggaaaattgatgcctttgctt |
972196 |
T |
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