View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2505_low_32 (Length: 239)
Name: NF2505_low_32
Description: NF2505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2505_low_32 |
 |  |
|
| [»] scaffold0014 (2 HSPs) |
 |  |  |
|
| [»] scaffold0102 (1 HSPs) |
 |  |  |
|
| [»] scaffold0079 (1 HSPs) |
 |  |  |
|
| [»] scaffold0591 (1 HSPs) |
 |  |  |
|
| [»] scaffold0258 (1 HSPs) |
 |  |  |
|
| [»] scaffold0004 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 126; Significance: 4e-65; HSPs: 20)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 47570675 - 47570800
Alignment:
| Q |
1 |
ttccaatctcatagtttctttcactttcataaaagaatgttcaaaattttatcaatgttaattatttaacatatattttcgttgtgcatgattaatgtgg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47570675 |
ttccaatctcatagtttctttcactttcataaaagaatgttcaaaattttatcaatgttaattatttaacatatattttcgttgtgcatgattaatgtgg |
47570774 |
T |
 |
| Q |
101 |
actcaagagataatgaatttaattta |
126 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
47570775 |
actcaagagataatgaatttaattta |
47570800 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 123 - 222
Target Start/End: Complemental strand, 49486922 - 49486823
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
222 |
Q |
| |
|
||||||||| |||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49486922 |
tttaatgaggcatatcctcaatggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
49486823 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 15752697 - 15752602
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
15752697 |
tttaatgaggcatatcttcaatggacatccaagggggaatgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatacta |
15752602 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 2978433 - 2978338
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| || ||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
2978433 |
tttaatgaggcatatcctcgatggacatccaagggggagtgttataaatattaatagtggatgtccaaataacaaatgtgttagtgggccatacta |
2978338 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 123 - 218
Target Start/End: Original strand, 21883385 - 21883480
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| |||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
21883385 |
tttaatgaggcatatcctcaatggacatccaagggggagtgttataaatattaatagcggatgtccaaatagcaaatgtgttattgagccatacta |
21883480 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 21477454 - 21477547
Alignment:
| Q |
124 |
ttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
|||||||| |||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
21477454 |
ttaatgaggcatatcctcaatggacatccaagggggagtgttataaatattaatagtggatgtccaaatagc-aatgtgttattgggccatacta |
21477547 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 49491380 - 49491320
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
222 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49491380 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
49491320 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 21473104 - 21473164
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
222 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
21473104 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatactattag |
21473164 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 21453157 - 21453216
Alignment:
| Q |
159 |
tagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
21453157 |
tagtgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatacta |
21453216 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 21458332 - 21458390
Alignment:
| Q |
160 |
agtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
21458332 |
agtgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatacta |
21458390 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 15758452 - 15758395
Alignment:
| Q |
161 |
gtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
15758452 |
gtgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatacta |
15758395 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 2982338 - 2982282
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
2982338 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggctatacta |
2982282 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 21877164 - 21877220
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
21877164 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatacta |
21877220 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 3110708 - 3110634
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaa |
197 |
Q |
| |
|
||||||||| ||||||| ||||| |||||||||| |||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
3110708 |
tttaatgaggcatatctgagatggacatccaagggggagtgttatgaatattacaagtggatgtccatatagcaa |
3110634 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 9724802 - 9724748
Alignment:
| Q |
143 |
atggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaa |
197 |
Q |
| |
|
||||| |||||||||| |||||||| ||||||| ||||||||||||| ||||||| |
|
|
| T |
9724802 |
atggacatccaagggggagtgttatgaatattactagtggatgtccatatagcaa |
9724748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 222
Target Start/End: Complemental strand, 13980855 - 13980756
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
222 |
Q |
| |
|
||||||||| |||||| || ||||| |||||||| |||||||| ||||||| |||||||||| | |||| || || |||| |||| ||||||||||| |
|
|
| T |
13980855 |
tttaatgaggcatatcctcgatggacatccaaggaagagtgttatgaatattataagtggatgtctatataggaattgggttattgggtcatactattag |
13980756 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 2168830 - 2168776
Alignment:
| Q |
143 |
atggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaa |
197 |
Q |
| |
|
||||| |||||||||| |||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
2168830 |
atggacatccaagggggagtgttatgaatattacaagtggatgtccatatagcaa |
2168776 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 13990812 - 13990866
Alignment:
| Q |
143 |
atggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaa |
197 |
Q |
| |
|
||||| |||||||||| |||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
13990812 |
atggacatccaagggggagtgttatgaatattacaagtggatgtccatatagcaa |
13990866 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 23344356 - 23344410
Alignment:
| Q |
143 |
atggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaa |
197 |
Q |
| |
|
||||| |||||||||| |||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
23344356 |
atggacatccaagggggagtgttatgaatattacaagtggatgtccatatagcaa |
23344410 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 40800817 - 40800763
Alignment:
| Q |
143 |
atggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaa |
197 |
Q |
| |
|
||||| |||||||||| |||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
40800817 |
atggacatccaagggggagtgttatgaatattacaagtggatgtccatatagcaa |
40800763 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 123 - 222
Target Start/End: Original strand, 111836 - 111935
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
222 |
Q |
| |
|
||||||||| |||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
111836 |
tttaatgaggcatatcctcaatggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
111935 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 106062 - 106122
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
222 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
106062 |
tgttataaatattaacagcggatgtccaaatagcaaatgtgttagtgggctatactattag |
106122 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 84; Significance: 5e-40; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 23053577 - 23053482
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23053577 |
tttaatgaggcatatcttcaatggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
23053482 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 123 - 222
Target Start/End: Complemental strand, 35264738 - 35264639
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
222 |
Q |
| |
|
||||||||| |||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35264738 |
tttaatgaggcatatcctcaatggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
35264639 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 123 - 218
Target Start/End: Original strand, 16675525 - 16675620
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| |||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
16675525 |
tttaatgaggcatatcctcaatggacatccaagggggagtgttataaatattaatagtgaatgtccaaatagcaaatgtgttagtgggccatacta |
16675620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 21171385 - 21171290
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
21171385 |
tttaatgaggcatatcctcaatggacatccaagggggagtgttataaatattaatagtggatgtccaaatggcaaatgtgttagtgggccatacta |
21171290 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 25365592 - 25365497
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| || ||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
25365592 |
tttaatgaggcatatcctcgatggacatccaagggggagtgttataaatattaatagtggatgttcaaatagcaaatgtgttattgggccatacta |
25365497 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 35270445 - 35270380
Alignment:
| Q |
157 |
ggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
222 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35270445 |
ggtactgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
35270380 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 23059113 - 23059057
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23059113 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
23059057 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 21178211 - 21178153
Alignment:
| Q |
160 |
agtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
21178211 |
agtgttataaatattaatagtggatgttcaaatggcaaatgtgttagtgggccatacta |
21178153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 39654086 - 39654030
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
39654086 |
tgttataaatattaatagtggatgtccaaataacaaatgtgttagtggaccatacta |
39654030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 30957776 - 30957722
Alignment:
| Q |
143 |
atggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaa |
197 |
Q |
| |
|
||||| |||||||||| |||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
30957776 |
atggacatccaagggggagtgttatgaatattacaagtggatgtccatatagcaa |
30957722 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 84; Significance: 5e-40; HSPs: 16)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 19437735 - 19437640
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19437735 |
tttaatgaggcatatcttcaatggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
19437640 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 24053486 - 24053391
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| ||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
24053486 |
tttaatgaggcatatcttcaatggacatctaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatacta |
24053391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 25445256 - 25445162
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| |||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
25445256 |
tttaatgaggcatatcctcaatggacatctaagggg-agtgttataaatattaatagtggatgtccaaatagcaaatgtgttaatgggccatacta |
25445162 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 43287591 - 43287496
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| |||||| | |||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||| |
|
|
| T |
43287591 |
tttaatgaggcatatcctcaatgaacatccaaggggaagtgttataaacattaatagtagatgtccaaatagcaaatgtgttattgggccatacta |
43287496 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 19443271 - 19443215
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19443271 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
19443215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 25454876 - 25454820
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
25454876 |
tgttataaatattaatagtgaatgtccaaatagcaaatgtgttagtgggccatacta |
25454820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 43293297 - 43293241
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
43293297 |
tgttataaacattaatagtggatgtccaaatagcaaatgtgttattgggccatacta |
43293241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 24056784 - 24056727
Alignment:
| Q |
160 |
agtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||| |
|
|
| T |
24056784 |
agtgttataaatattaatagtggatgtccagatagcaaatgtgtta-ttggccatacta |
24056727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 31433045 - 31433082
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaat |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31433045 |
tgttataaatattaatagtggatgtccaaatagcaaat |
31433082 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 31437151 - 31437204
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccata |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||| | |||||| |||| ||| ||||| |
|
|
| T |
31437151 |
tgttataaatattaatagtggatgtccaaacaacaaatgagttaatggaccata |
31437204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 16443527 - 16443472
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaata |
178 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||| |||||||| |||| ||||| |
|
|
| T |
16443527 |
tttaatgagacatatctttcatggacatccaagggggagtgttatgaataataata |
16443472 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 7910162 - 7910096
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtcca |
189 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||| |||||||| ||||||| |||||||||||| |
|
|
| T |
7910162 |
tttaatgagacatatccgagatggacatccaagggggagtgttatgaatattacaagtggatgtcca |
7910096 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 22430328 - 22430382
Alignment:
| Q |
143 |
atggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaa |
197 |
Q |
| |
|
||||| |||||||||| |||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
22430328 |
atggacatccaagggggagtgttatgaatattacaagtggatgtccatatagcaa |
22430382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 22435922 - 22435976
Alignment:
| Q |
143 |
atggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaa |
197 |
Q |
| |
|
||||| |||||||||| |||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
22435922 |
atggacatccaagggggagtgttatgaatattacaagtggatgtccatatagcaa |
22435976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 43776971 - 43777025
Alignment:
| Q |
143 |
atggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaa |
197 |
Q |
| |
|
||||| |||||||||| |||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
43776971 |
atggacatccaagggggagtgttatgaatattacaagtggatgtccatatagcaa |
43777025 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 25231944 - 25231996
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatatta |
175 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||| | |||||| ||||||| |
|
|
| T |
25231944 |
tttaatgaggcatatctttgatggatatccaagggggaatgttatgaatatta |
25231996 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 29)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 12659389 - 12659294
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
12659389 |
tttaatgaggcatatcttcaatggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatacta |
12659294 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 16325916 - 16325821
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
16325916 |
tttaatgaggcatatcttcaatggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatacta |
16325821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 30673897 - 30673802
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30673897 |
tttaatgaggcatatcctcaatggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
30673802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 1874190 - 1874092
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactatta |
221 |
Q |
| |
|
||||| ||| |||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1874190 |
tttaacgaggcatatcctcaatggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactatta |
1874092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 123 - 223
Target Start/End: Original strand, 23200487 - 23200587
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
222 |
Q |
| |
|
||||||||| |||||| |||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
23200487 |
tttaatgaggcatatcctcaatggacatctaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactag |
23200586 |
T |
 |
| Q |
223 |
t |
223 |
Q |
| |
|
| |
|
|
| T |
23200587 |
t |
23200587 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 12435544 - 12435449
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| || ||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12435544 |
tttaatgaggcatatcctcgatggacatccaagggggagtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatacta |
12435449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 123 - 218
Target Start/End: Original strand, 29333598 - 29333693
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| || ||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29333598 |
tttaatgaggcatatcctcgatggacatccaagggggagtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatacta |
29333693 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 123 - 218
Target Start/End: Original strand, 42411068 - 42411163
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| || ||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42411068 |
tttaatgaggcatatcctcgatggacatccaagggggagtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatacta |
42411163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 133 - 223
Target Start/End: Complemental strand, 25687746 - 25687656
Alignment:
| Q |
133 |
catatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattagt |
223 |
Q |
| |
|
|||||| |||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
25687746 |
catatcctcaatgaacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactactagt |
25687656 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 911044 - 910949
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| || ||||| ||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
911044 |
tttaatgaggcatatcctcgatggacatccaagaggaagtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatacta |
910949 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 18890000 - 18890062
Alignment:
| Q |
160 |
agtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
222 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18890000 |
agtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
18890062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 1913892 - 1913832
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
222 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1913892 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
1913832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 30679951 - 30679895
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30679951 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
30679895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 12429080 - 12428986
Alignment:
| Q |
124 |
ttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
|||||||| |||||| |||||||| |||||||| | |||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||| |
|
|
| T |
12429080 |
ttaatgaggcatatcctcaatggacatccaaggaggagtgttataaatattaatagtggatgtccaaagagcaaataggtttatgggccatacta |
12428986 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 23187962 - 23188024
Alignment:
| Q |
161 |
gtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattagt |
223 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
23187962 |
gtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtggaccatactactagt |
23188024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 16334921 - 16334865
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
16334921 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatacta |
16334865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 42404643 - 42404699
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42404643 |
tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatacta |
42404699 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 25697483 - 25697424
Alignment:
| Q |
164 |
ttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattagt |
223 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
25697483 |
ttataaatattaatagtggatatccaaatagcaaatgtgttagtgggccatactactagt |
25697424 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 42119934 - 42119839
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| |||||| |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||| |
|
|
| T |
42119934 |
tttaatgaggcatatcctcaatgagcttccaagggagaatgttataaatattaatagtggatgtccaaatagcaaatggattaatgggtcatacta |
42119839 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 55325479 - 55325532
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccata |
215 |
Q |
| |
|
||||||||||||||||| | ||||||||||||||||||||||||||||| |||| |
|
|
| T |
55325479 |
tgttataaatattaataatagatgtccaaatagcaaatgtgttagtgggtcata |
55325532 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 917447 - 917391
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||| ||||||||||| |||||| |
|
|
| T |
917447 |
tgttataaatattaatattggatgtctaaatagcaaatatgttagtgggctatacta |
917391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 12439449 - 12439395
Alignment:
| Q |
164 |
ttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
12439449 |
ttataaatattaatagtggatgtccaaatagcaaataggtttatgggccatacta |
12439395 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 48305499 - 48305445
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatac |
216 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| | |||| |||||||||| |
|
|
| T |
48305499 |
tgttataaatattaaaagtggatgtccaaatagcaaacgcgttaatgggccatac |
48305445 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 4393940 - 4393869
Alignment:
| Q |
134 |
atatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgtta |
205 |
Q |
| |
|
||||| || ||||| |||||| || |||||||||||||||||||||||||||| ||||| |||||| |||| |
|
|
| T |
4393940 |
atatcctcgatggacatccaatggagagtgttataaatattaatagtggatgtctaaataacaaatgggtta |
4393869 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 33360341 - 33360282
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactatta |
221 |
Q |
| |
|
||||||||||||||| |||| |||| |||||||||||||||||||| | | ||||||||| |
|
|
| T |
33360341 |
tgttataaatattaagagtgaatgtacaaatagcaaatgtgttagttgactatactatta |
33360282 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 20192771 - 20192717
Alignment:
| Q |
143 |
atggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaa |
197 |
Q |
| |
|
||||| |||||||||| |||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
20192771 |
atggacatccaagggggagtgttatgaatattacaagtggatgtccatatagcaa |
20192717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 53982075 - 53982129
Alignment:
| Q |
143 |
atggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaa |
197 |
Q |
| |
|
||||| |||||||||| |||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
53982075 |
atggacatccaagggggagtgttatgaatattacaagtggatgtccatatagcaa |
53982129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 12665859 - 12665804
Alignment:
| Q |
166 |
ataaatattaatagtggatgt---ccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||||||| ||||||| |||||||||| |||||||||||| |
|
|
| T |
12665859 |
ataaatattaatagtggatgttgtccaaataataaatgtgttattgggccatacta |
12665804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 19581996 - 19582088
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccata |
215 |
Q |
| |
|
|||||||||||||||||| ||||| ||| |||| | |||||||| ||| ||| |||||||||||| ||| ||| || |||| || |||||| |
|
|
| T |
19581996 |
tttaatgagacatatctttgatggacatctaaggaggagtgttatgaattttataagtggatgtccatatatcaattgggttattgagccata |
19582088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 19)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 18535177 - 18535082
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18535177 |
tttaatgaggcatatcctcaatggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
18535082 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 31093145 - 31093050
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31093145 |
tttaatgaggcatatcctcaatggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
31093050 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 37356931 - 37356836
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
37356931 |
tttaatgaggcatatcttcaatggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatacta |
37356836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 123 - 218
Target Start/End: Original strand, 11660138 - 11660233
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |
|
|
| T |
11660138 |
tttaatgaggcatatcctcaatggacatccaagggggagtgttataaatattaatagtggatgtccaagtaacaaatgtgttagtgggccatacta |
11660233 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 123 - 218
Target Start/End: Original strand, 28519236 - 28519331
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| || ||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28519236 |
tttaatgaggcatatcctcgatggacatccaagggggagtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatacta |
28519331 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 123 - 218
Target Start/End: Original strand, 38991060 - 38991155
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| || ||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38991060 |
tttaatgaggcatatcctcgatggacatccaagggggagtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatacta |
38991155 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 18540864 - 18540808
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18540864 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
18540808 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 31099712 - 31099656
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31099712 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
31099656 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 35625411 - 35625355
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
35625411 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatacta |
35625355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 38984912 - 38984968
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38984912 |
tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatacta |
38984968 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 37365312 - 37365254
Alignment:
| Q |
160 |
agtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
37365312 |
agtgttataaatattaatagtggatgtccaaatagcaaatgtgttattggaccatacta |
37365254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 27347326 - 27347270
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
27347326 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgagccatacta |
27347270 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 7876091 - 7876147
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
7876091 |
tgttataaatattaatagtgaatgtccaaataacaaatgtgttagtggaccatacta |
7876147 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 11654020 - 11654076
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
11654020 |
tgttataaatattaatagtggatatccaaatagcaaatgtgttagtggatcatacta |
11654076 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 38736039 - 38736099
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
222 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||| ||||| |||||||||||||||| |
|
|
| T |
38736039 |
tgttataaatattaatagtggttgtccaaatagaaaatatgttattgggccatactattag |
38736099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 28512810 - 28512866
Alignment:
| Q |
160 |
agtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
28512810 |
agtgttataaatattaatattggatgtccaa--agcaaatgtgttagtgggccatacta |
28512866 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 39492740 - 39492777
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaat |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39492740 |
tgttataaatattaatagtggatgtccaaatagcaaat |
39492777 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 33493116 - 33493062
Alignment:
| Q |
143 |
atggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaa |
197 |
Q |
| |
|
||||| |||||||||| |||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
33493116 |
atggacatccaagggggagtgttatgaatattacaagtggatgtccatatagcaa |
33493062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 15716610 - 15716658
Alignment:
| Q |
149 |
atccaaggggtagtgttataaatattaatagtggatgtccaaatagcaa |
197 |
Q |
| |
|
|||||||||| |||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
15716610 |
atccaagggggagtgttatgaatattacaagtggatgtccatatagcaa |
15716658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 77; Significance: 7e-36; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 8248071 - 8248163
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccata |
215 |
Q |
| |
|
||||||||| |||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8248071 |
tttaatgaggcatatcctcaatggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccata |
8248163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 340491 - 340396
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| |||||||| |||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||| || ||||||||| |
|
|
| T |
340491 |
tttaatgaggcatatcctcaatggacatccaagggggagtgttataaatattaatagcggatgtccaaataacaaatgtgttattgagccatacta |
340396 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 22822535 - 22822593
Alignment:
| Q |
160 |
agtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22822535 |
agtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatacta |
22822593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 218
Target Start/End: Original strand, 29185487 - 29185579
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| || ||||| |||||||||| |||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
29185487 |
tttaatgaggcatatcctcgatggacatccaagggggagtgttat---tattaatattggatgtccaaatagaaaatgtgttagtgggccatacta |
29185579 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 22826840 - 22826896
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22826840 |
tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatacta |
22826896 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 8242541 - 8242594
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccata |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
8242541 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggtcata |
8242594 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 29176544 - 29176600
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
29176544 |
tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggtcatacta |
29176600 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 346686 - 346630
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
346686 |
tgttataaatattaatagcggatgtccaaatagcaaatgtgttattgagccatacta |
346630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 199
Target Start/End: Complemental strand, 25830585 - 25830510
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaat |
199 |
Q |
| |
|
||||| ||| |||||| || ||||| || ||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25830585 |
tttaacgaggcatatcctcgatggacattcaagggg-agtgttataaatattaatagtggatgtccaaatagcaaat |
25830510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 222
Target Start/End: Original strand, 25499014 - 25499113
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
222 |
Q |
| |
|
||||||||| |||||| || ||||| |||||||||| |||||||| ||||||| |||||||||||| ||||||| | |||| |||| ||||||||||| |
|
|
| T |
25499014 |
tttaatgaggcatatcctcgatggacatccaagggggagtgttatgaatattataagtggatgtccatatagcaattaggttattgggtcatactattag |
25499113 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 2068882 - 2068826
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| | ||| |||||| |
|
|
| T |
2068882 |
tgttataaatattaatagtggatgtccaaatagcaaatgagttaataggctatacta |
2068826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 222
Target Start/End: Complemental strand, 558071 - 557972
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
222 |
Q |
| |
|
||||||||| |||||| || ||||| |||||||||| |||||||| ||||||| |||||||||| | ||| ||| | |||| |||| ||||||||||| |
|
|
| T |
558071 |
tttaatgaggcatatcctcgatggacatccaagggggagtgttatgaatattataagtggatgtctatataacaattcggttattgggtcatactattag |
557972 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 16648383 - 16648457
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaa |
197 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||| | |||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
16648383 |
tttaatgagacatatccgaaatggacatccaagggggaatgttatgaatattacaagtggatgtccatatagcaa |
16648457 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 17622744 - 17622818
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaa |
197 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||| | |||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
17622744 |
tttaatgagacatatccgaaatggacatccaagggggaatgttatgaatattacaagtggatgtccatatagcaa |
17622818 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 42208874 - 42208927
Alignment:
| Q |
144 |
tggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaa |
197 |
Q |
| |
|
|||| |||||||||| |||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
42208874 |
tggacatccaagggggagtgttatgaatattacaagtggatgtccatatagcaa |
42208927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 42162428 - 42162380
Alignment:
| Q |
149 |
atccaaggggtagtgttataaatattaatagtggatgtccaaatagcaa |
197 |
Q |
| |
|
|||||||||| |||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
42162428 |
atccaaggggaagtgttatgaatattacaagtggatgtccatatagcaa |
42162380 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0102 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0102
Description:
Target: scaffold0102; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 123 - 218
Target Start/End: Original strand, 13986 - 14081
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
13986 |
tttaatgaggcatatcctcaatggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgagccatacta |
14081 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 76; Significance: 3e-35; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 30714413 - 30714318
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
30714413 |
tttaatgaggcatatcctcaatggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaattgtgttagtgggccatacta |
30714318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 30722190 - 30722095
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
30722190 |
tttaatgaggcatatcctcaatggacatccaagggggagtgttataaatattaatagtggatgtccaaatagcaattgtgttagtgggccatacta |
30722095 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 27679822 - 27679727
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| || ||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27679822 |
tttaatgaggcatatcctcgatggacatccaagggggagtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatacta |
27679727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 123 - 218
Target Start/End: Original strand, 37209673 - 37209768
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| || ||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37209673 |
tttaatgaggcatatcctcgatggacatccaagggggagtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatacta |
37209768 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 123 - 218
Target Start/End: Original strand, 21247637 - 21247732
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| || ||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
21247637 |
tttaatgaggcatatcctcgatggacatccaagggggagtgttataaatattaatattggatgtccaaatagcaaatgtgttagtggaccatacta |
21247732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 30727759 - 30727703
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30727759 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
30727703 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 26196858 - 26196952
Alignment:
| Q |
124 |
ttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||||| |||||||||||| ||| |||||||||||| |
|
|
| T |
26196858 |
ttaatgagacatatcctcaatggacattcaagggggggtgttataaatattaatagtggatgttcaaatagcaaataggtttatgggccatacta |
26196952 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 37204233 - 37204291
Alignment:
| Q |
160 |
agtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37204233 |
agtgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatacta |
37204291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 27683565 - 27683509
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27683565 |
tgttataaatattaatattggatgtccaaatagcaaatgtgttagtgggccatacta |
27683509 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 21241172 - 21241228
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
21241172 |
tgttataaatattaatattggatgtccaaatagcaaatgtgttagtggaccatacta |
21241228 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 26197089 - 26197052
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaat |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26197089 |
tgttataaatattaatagtggatgtccaaatagcaaat |
26197052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 24043004 - 24042953
Alignment:
| Q |
171 |
tattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
222 |
Q |
| |
|
||||||| |||| |||||||||| ||||||||||| ||||||||| |||||| |
|
|
| T |
24043004 |
tattaattgtgggtgtccaaataacaaatgtgttaatgggccataatattag |
24042953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 12756361 - 12756295
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtcca |
189 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||| |||||||| ||||||| |||||||||||| |
|
|
| T |
12756361 |
tttaatgagacatatccgagatggacatccaagggggagtgttatgaatattacaagtggatgtcca |
12756295 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 41048845 - 41048893
Alignment:
| Q |
149 |
atccaaggggtagtgttataaatattaatagtggatgtccaaatagcaa |
197 |
Q |
| |
|
|||||||||| |||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
41048845 |
atccaaggggaagtgttatgaatattacaagtggatgtccatatagcaa |
41048893 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 64; Significance: 4e-28; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 123 - 218
Target Start/End: Original strand, 23427443 - 23427538
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||| |||||| || ||||| |||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
23427443 |
tttaatgaggcatatcctcgatggacatccaagggggagtgttataaatattaatatttgatgtccaaatagcaaatgtgttagtggaccatacta |
23427538 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 18738573 - 18738629
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18738573 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
18738629 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 23421636 - 23421692
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||||||||||||||| | |||||| |
|
|
| T |
23421636 |
tgttataaatattaatatttgatgtccaaatagcaaatgtgttagtggactatacta |
23421692 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 33661052 - 33661015
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaat |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33661052 |
tgttataaatattaatagtggatgtccaaatagcaaat |
33661015 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 222
Target Start/End: Original strand, 6933000 - 6933099
Alignment:
| Q |
123 |
tttaatgagacatatcttcaatggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatactattag |
222 |
Q |
| |
|
||||||||| ||||||||| | ||| |||||||| | ||||||| ||||||| |||||||||||| ||||||| || |||| |||| |||||| |||| |
|
|
| T |
6933000 |
tttaatgaggcatatcttcgacggacatccaaggagctgtgttatgaatattataagtggatgtccatatagcaattgggttattgggtcatactgttag |
6933099 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 14855917 - 14855971
Alignment:
| Q |
143 |
atggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaa |
197 |
Q |
| |
|
||||| |||||||||| |||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
14855917 |
atggacatccaagggggagtgttatgaatattacaagtggatgtccatatagcaa |
14855971 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0079 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0079
Description:
Target: scaffold0079; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 57939 - 57995
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
57939 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttattgggccatacta |
57995 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0591 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0591
Description:
Target: scaffold0591; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 9323 - 9379
Alignment:
| Q |
162 |
tgttataaatattaatagtggatgtccaaatagcaaatgtgttagtgggccatacta |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
9323 |
tgttataaatattaatagtggatgtccaaatagcaaatgtattattgggccatacta |
9379 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0258 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0258
Description:
Target: scaffold0258; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 199
Target Start/End: Complemental strand, 6435 - 6400
Alignment:
| Q |
164 |
ttataaatattaatagtggatgtccaaatagcaaat |
199 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |
|
|
| T |
6435 |
ttataaatattaacagtggatgtccaaatagcaaat |
6400 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 345850 - 345796
Alignment:
| Q |
143 |
atggatatccaaggggtagtgttataaatattaatagtggatgtccaaatagcaa |
197 |
Q |
| |
|
||||| |||||||||| |||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
345850 |
atggacatccaagggggagtgttatgaatattacaagtggatgtccatatagcaa |
345796 |
T |
 |
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