View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2505_low_35 (Length: 236)
Name: NF2505_low_35
Description: NF2505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2505_low_35 |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 41842958 - 41843178
Alignment:
| Q |
1 |
tgttgctgagcctcttggtctagtcctcataatctcatcatggaattttccttttggtgagtaaaataaagttttagtatattaaatctataaagaaatc |
100 |
Q |
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| T |
41842958 |
tgttgctgagcctcttggtctagtcctcataatctcatcatggaattttccctttggtgagtaaaataaagttttagtatattaaatctataaagaaatc |
41843057 |
T |
|
| Q |
101 |
aagtgcaaagtggtgcctctcttggttacaatatcaacaagatatggttggttttatgaacaggactgtccttggagccattaattggagccatagctgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41843058 |
aagtgcaaagtggtgcctctcttggttacaatatcaacaagatatggttggttttatgaacaggactgtccttggagccattaattggagccatagctgc |
41843157 |
T |
|
| Q |
201 |
tggaaatgttgcagtactaaa |
221 |
Q |
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||||||||||||||| ||||| |
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| T |
41843158 |
tggaaatgttgcagtcctaaa |
41843178 |
T |
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