View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2506_high_9 (Length: 237)
Name: NF2506_high_9
Description: NF2506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2506_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 14168415 - 14168634
Alignment:
| Q |
1 |
tccaaaaatgttgctcctatgtctagcccttgatacatatgaccattgttgcttcctgatcttaatgttctatcaatcattaactatggttttgatggag |
100 |
Q |
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| T |
14168415 |
tccaaaaatgtcgctcctatgactagcccttgatacatatgaccattgttgcttcctgatcttaatgttgtatcaatcattaactatggttttgatggag |
14168514 |
T |
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| Q |
101 |
gaaaacaatattttatgttgggttattaaaagagtggtgtgtacaaaggaaccaagaactccaaacgagaagacacaggggcgagaaattatgggtatcc |
200 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||| |
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| T |
14168515 |
gaaaacaatattttatattgggttattaaaagagtggtgtgtacaaaggaaccaagaactccaaacgagaagatacatgggcgagaaattatggatatcc |
14168614 |
T |
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| Q |
201 |
atgtaggaaactagttgtat |
220 |
Q |
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|||||||||| ||||||||| |
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| T |
14168615 |
atgtaggaaagtagttgtat |
14168634 |
T |
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