View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2506_low_8 (Length: 249)
Name: NF2506_low_8
Description: NF2506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2506_low_8 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 19 - 249
Target Start/End: Original strand, 53453418 - 53453648
Alignment:
| Q |
19 |
atcatgatcgtcctccgtaactctcctcaatttgctctcaccttcctcggtgcctccttccgtggcgcggttatcaccaccgcaaatcccttctacacct |
118 |
Q |
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| T |
53453418 |
atcatgatcgtcctccgtaactctcctcaatttgcactcaccttcctcggtgcctccttccgcggcgcggttatcaccaccgcaaatcccttctacacct |
53453517 |
T |
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| Q |
119 |
catcggagctcgctaaacaagccaccgcaacaaaatctaaactcatcataacacaatccgcgtatctcaataaaatcaatgatttcgcaaaactcaacga |
218 |
Q |
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| T |
53453518 |
catcggagctcgctaaacaagccaccgcaacaaaatctaaactcatcataacacaatccgtatatctcaataaaatcaacgatttcgcaaaactcatcga |
53453617 |
T |
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| Q |
219 |
catcaaaatcgtgtgcattgattcatcaccg |
249 |
Q |
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| T |
53453618 |
catcaaaatcgtgtgcattgattcatcaccg |
53453648 |
T |
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