View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2507_low_12 (Length: 302)

Name: NF2507_low_12
Description: NF2507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2507_low_12
NF2507_low_12
[»] chr4 (20 HSPs)
chr4 (19-199)||(27375282-27375456)
chr4 (218-302)||(47377544-47377628)
chr4 (207-248)||(25970113-25970154)
chr4 (199-248)||(36450727-36450776)
chr4 (199-248)||(30808620-30808669)
chr4 (199-248)||(39429224-39429273)
chr4 (207-255)||(232042-232090)
chr4 (200-248)||(23425207-23425255)
chr4 (200-248)||(25970803-25970851)
chr4 (227-275)||(31911441-31911489)
chr4 (227-275)||(32450191-32450239)
chr4 (200-248)||(39652059-39652107)
chr4 (200-247)||(55514355-55514402)
chr4 (213-267)||(34371475-34371529)
chr4 (207-248)||(39429937-39429978)
chr4 (128-184)||(24704135-24704191)
chr4 (200-248)||(30809505-30809553)
chr4 (200-248)||(45330565-45330613)
chr4 (200-248)||(45331453-45331501)
chr4 (200-248)||(47376852-47376900)
[»] chr7 (18 HSPs)
chr7 (202-267)||(44541689-44541754)
chr7 (207-267)||(24996664-24996724)
chr7 (207-267)||(24995859-24995919)
chr7 (200-248)||(27599211-27599259)
chr7 (200-248)||(27600095-27600143)
chr7 (207-266)||(42607088-42607147)
chr7 (200-242)||(9122650-9122692)
chr7 (207-261)||(42607799-42607853)
chr7 (207-248)||(29060739-29060780)
chr7 (197-248)||(32871140-32871191)
chr7 (207-266)||(40257784-40257843)
chr7 (207-248)||(40320410-40320451)
chr7 (152-193)||(47343183-47343224)
chr7 (200-248)||(5063323-5063371)
chr7 (207-243)||(6730162-6730198)
chr7 (207-247)||(36844619-36844659)
chr7 (200-248)||(43846916-43846963)
chr7 (200-236)||(46759274-46759310)
[»] chr1 (21 HSPs)
chr1 (200-276)||(36272519-36272595)
chr1 (200-276)||(6768090-6768166)
chr1 (207-254)||(4640535-4640582)
chr1 (207-254)||(4641756-4641803)
chr1 (200-255)||(29334214-29334269)
chr1 (200-255)||(43316357-43316412)
chr1 (200-255)||(50950145-50950200)
chr1 (207-249)||(30466189-30466231)
chr1 (198-255)||(38932121-38932178)
chr1 (207-248)||(47334206-47334247)
chr1 (200-248)||(11031431-11031479)
chr1 (200-248)||(11032219-11032267)
chr1 (200-248)||(47334900-47334948)
chr1 (120-163)||(4865822-4865865)
chr1 (200-247)||(11426853-11426900)
chr1 (207-248)||(38931321-38931362)
chr1 (207-248)||(41884229-41884270)
chr1 (207-248)||(48835097-48835138)
chr1 (199-247)||(294624-294672)
chr1 (199-267)||(7464051-7464119)
chr1 (199-247)||(36153897-36153945)
[»] chr6 (5 HSPs)
chr6 (200-302)||(24125972-24126074)
chr6 (207-283)||(8383983-8384059)
chr6 (207-248)||(29290130-29290171)
chr6 (97-161)||(6329839-6329902)
chr6 (199-248)||(24126718-24126767)
[»] chr5 (14 HSPs)
chr5 (207-266)||(4789527-4789586)
chr5 (207-266)||(6804898-6804957)
chr5 (199-248)||(1970514-1970563)
chr5 (200-247)||(9142047-9142094)
chr5 (199-296)||(472996-473093)
chr5 (200-248)||(4607136-4607184)
chr5 (207-247)||(26712389-26712429)
chr5 (207-247)||(26982127-26982167)
chr5 (200-247)||(4555390-4555437)
chr5 (201-267)||(6804814-6804880)
chr5 (149-187)||(29667894-29667932)
chr5 (200-248)||(9924124-9924171)
chr5 (200-248)||(32943517-32943565)
chr5 (207-267)||(35262459-35262519)
[»] chr2 (19 HSPs)
chr2 (200-255)||(7868134-7868189)
chr2 (125-182)||(39635308-39635365)
chr2 (207-255)||(36390964-36391012)
chr2 (200-247)||(5005462-5005509)
chr2 (200-262)||(23462405-23462467)
chr2 (199-248)||(37546564-37546613)
chr2 (200-248)||(20991287-20991335)
chr2 (207-247)||(23876064-23876104)
chr2 (207-267)||(34617660-34617720)
chr2 (207-255)||(36391665-36391713)
chr2 (199-267)||(41768724-41768792)
chr2 (129-172)||(6973127-6973170)
chr2 (200-247)||(7867170-7867217)
chr2 (207-266)||(15602802-15602861)
chr2 (225-266)||(42370932-42370973)
chr2 (200-248)||(4769052-4769100)
chr2 (207-247)||(6085702-6085742)
chr2 (199-247)||(36476747-36476795)
chr2 (200-248)||(37545676-37545724)
[»] chr3 (16 HSPs)
chr3 (200-246)||(44022089-44022135)
chr3 (199-248)||(43768025-43768074)
chr3 (200-267)||(52399009-52399076)
chr3 (207-248)||(49161808-49161849)
chr3 (207-255)||(8653713-8653761)
chr3 (199-255)||(44406952-44407008)
chr3 (120-187)||(23653216-23653283)
chr3 (207-266)||(33968188-33968247)
chr3 (207-250)||(45501292-45501335)
chr3 (200-255)||(51420861-51420916)
chr3 (207-248)||(31598794-31598835)
chr3 (207-248)||(33455781-33455822)
chr3 (119-172)||(49189496-49189549)
chr3 (207-248)||(51421675-51421716)
chr3 (207-255)||(8652817-8652865)
chr3 (207-247)||(49160994-49161034)
[»] chr8 (7 HSPs)
chr8 (199-248)||(42345393-42345442)
chr8 (200-248)||(7054090-7054138)
chr8 (207-261)||(35943083-35943137)
chr8 (207-248)||(35840530-35840571)
chr8 (200-248)||(13935053-13935101)
chr8 (207-267)||(34364661-34364721)
chr8 (200-248)||(43433811-43433859)
[»] scaffold0129 (1 HSPs)
scaffold0129 (198-250)||(43216-43268)
[»] scaffold2003 (1 HSPs)
scaffold2003 (200-255)||(524-579)
[»] scaffold0150 (1 HSPs)
scaffold0150 (199-242)||(14011-14054)


Alignment Details
Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 199
Target Start/End: Complemental strand, 27375456 - 27375282
Alignment:
Q  19 ataagattcattgaatcgtttggtattactattagactaatctgaagtctcaatcatctcaaaattgaagttcgcacgttttaaatgtggtaaaaataga 118  Q
    ||||||||||||||||||||||||||||      || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27375456 ataagattcattgaatcgtttggtatta------gattaatctgaagtctcaatcatctcaaaactgaagttcgcacgttttaaatgtggtaaaaataga 27375363  T
Q  119 atgttcggagttcgaactccaacccctacgtatattatgcaatgtttttaccaatcgagttaagttcacagtgacgtaggt 199  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||| ||||| |||||||||||    
T  27375362 atgttcggagttcgaactccaacccctacgtatattatacaatgttcttatcaatcgagttaaattcacggtgacgtaggt 27375282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 302
Target Start/End: Complemental strand, 47377628 - 47377544
Alignment:
Q  218 aaaggggagttgtttcccaccatgggaaagtaatttttggccatcagatttaggaggatcgttgattttagtataatctacccac 302  Q
    ||||||||||||||||||||||||||||||| |||||  ||||| ||||||| ||||| | || |||||| |||| |||| ||||    
T  47377628 aaaggggagttgtttcccaccatgggaaagttattttcagccattagatttaagaggaacattaattttattatagtctatccac 47377544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 25970113 - 25970154
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  25970113 tttagcatgggaaaggggagttgtttcccaccatgggaaagt 25970154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 36450727 - 36450776
Alignment:
Q  199 tggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  36450727 tggtggtatttagcatgggaaaggggagttgttttccaccatgggaaagt 36450776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 30808620 - 30808669
Alignment:
Q  199 tggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    ||||||||||||  |||| ||||| |||||||||||||||||||||||||    
T  30808620 tggtggcatttaaaatgggaaaggagagttgtttcccaccatgggaaagt 30808669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 39429224 - 39429273
Alignment:
Q  199 tggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||||||||||| || || ||||||||||| |||||||||||||    
T  39429224 tggtggcatttagcatgggaatggagagttgtttcctaccatgggaaagt 39429273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 232090 - 232042
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaattttt 255  Q
    ||||| |||| |||||| |||||||||||||||||||||||||| ||||    
T  232090 tttagtatgggaaagggaagttgtttcccaccatgggaaagtaaatttt 232042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 23425255 - 23425207
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||||| |||| || || |||||||||||||||||||||||||    
T  23425255 ggtggcatttagtatgggaatggagagttgtttcccaccatgggaaagt 23425207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 25970851 - 25970803
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||||| |||| ||| |||||||||||||||||||| ||||||    
T  25970851 ggtggcatttagtatgggaaaagggagttgtttcccaccatgagaaagt 25970803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 275
Target Start/End: Complemental strand, 31911489 - 31911441
Alignment:
Q  227 ttgtttcccaccatgggaaagtaatttttggccatcagatttaggagga 275  Q
    |||||||||||||||| |||||| |||||| |||||||||| |||||||    
T  31911489 ttgtttcccaccatggaaaagtattttttgaccatcagattaaggagga 31911441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 275
Target Start/End: Complemental strand, 32450239 - 32450191
Alignment:
Q  227 ttgtttcccaccatgggaaagtaatttttggccatcagatttaggagga 275  Q
    |||||||||||||||| |||||| |||||| |||||||||| |||||||    
T  32450239 ttgtttcccaccatggaaaagtattttttgaccatcagattaaggagga 32450191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 39652107 - 39652059
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    ||||||||||||||||| || || |||||||||| ||||||||||||||    
T  39652107 ggtggcatttagcatgggaatggagagttgtttctcaccatgggaaagt 39652059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 55514402 - 55514355
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaag 247  Q
    |||| |||||||||||| |||||  |||||||||||||||||||||||    
T  55514402 ggtgccatttagcatgggaaaggaaagttgtttcccaccatgggaaag 55514355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 34371475 - 34371529
Alignment:
Q  213 atggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagatt 267  Q
    |||| |||||||| ||||||||||||||||||||||  |||||| |||| |||||    
T  34371475 atgggaaaggggaattgtttcccaccatgggaaagttttttttgtccattagatt 34371529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 39429978 - 39429937
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||| || || |||||||||||||||||||||||||    
T  39429978 tttagcatgggaatggagagttgtttcccaccatgggaaagt 39429937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 24704191 - 24704135
Alignment:
Q  128 gttcgaactccaacccctacgtatattatgcaatgtttttaccaatcgagttaagtt 184  Q
    ||||||||||| |||||| | || |||||||||||||  ||||||| ||||||||||    
T  24704191 gttcgaactccgacccctgcataaattatgcaatgttcctaccaattgagttaagtt 24704135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 30809553 - 30809505
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||||  |||| ||||||||||||||| |||||||| ||||||    
T  30809553 ggtggcatttaaaatgggaaaggggagttgttttccaccatgagaaagt 30809505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 45330565 - 45330613
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    ||||| |||||  |||| ||||||||||||||||||||||||| |||||    
T  45330565 ggtggaatttaaaatgggaaaggggagttgtttcccaccatggaaaagt 45330613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 45331501 - 45331453
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||||  |||  |||||||||||||||||||||||| ||||||    
T  45331501 ggtggcatttaaaatgagaaaggggagttgtttcccaccatgagaaagt 45331453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 47376852 - 47376900
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||||   ||| ||||||||||||||||||| |||||||||||    
T  47376852 ggtggcatttaatttgggaaaggggagttgtttcccatcatgggaaagt 47376900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 44541754 - 44541689
Alignment:
Q  202 tggcatttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagatt 267  Q
    ||||||||||||||| |||| ||| |||||||| |||||||||||||| |||||||||||||||||    
T  44541754 tggcatttagcatgggaaagtggaattgtttccgaccatgggaaagtattttttggccatcagatt 44541689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 24996724 - 24996664
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagatt 267  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||| |||| |||||    
T  24996724 tttagcatgggaaaggggagttgtttcccaccatgggaaagtattttttgaccattagatt 24996664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 24995859 - 24995919
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagatt 267  Q
    ||||| |||| |||||||||||||||||||||||||||||||| |||||| |||| |||||    
T  24995859 tttagaatgggaaaggggagttgtttcccaccatgggaaagtattttttgaccattagatt 24995919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 27599211 - 27599259
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||||  |||| |||||||||||||||||||||||||||||||    
T  27599211 ggtggcatttaaaatgggaaaggggagttgtttcccaccatgggaaagt 27599259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 27600143 - 27600095
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||||  |||| |||||||||||||||||||||||||||||||    
T  27600143 ggtggcatttaaaatgggaaaggggagttgtttcccaccatgggaaagt 27600095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 266
Target Start/End: Original strand, 42607088 - 42607147
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagat 266  Q
    |||||||||| |||||||| ||||||||||||||||||||||  |||||| |||| ||||    
T  42607088 tttagcatgggaaaggggaattgtttcccaccatgggaaagttgtttttgtccattagat 42607147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 9122650 - 9122692
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgg 242  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  9122650 ggtggcatttagcatgggaaagggaagttgtttcccaccatgg 9122692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 261
Target Start/End: Complemental strand, 42607853 - 42607799
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccat 261  Q
    ||||||||||||||||||| |||||||||| ||| ||||||| ||||||| ||||    
T  42607853 tttagcatggaaaaggggaattgtttcccatcataggaaagttatttttgtccat 42607799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 29060780 - 29060739
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  29060780 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 29060739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 248
Target Start/End: Complemental strand, 32871191 - 32871140
Alignment:
Q  197 ggtggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    ||||||||  |||||||||| || |||||||||||||||||||| |||||||    
T  32871191 ggtggtggggtttagcatgggaatggggagttgtttcccaccataggaaagt 32871140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 266
Target Start/End: Complemental strand, 40257843 - 40257784
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagat 266  Q
    |||||||||| ||| |||||||||||||||||||| ||||||  |||||| |||| ||||    
T  40257843 tttagcatgggaaatgggagttgtttcccaccatgagaaagttgtttttgtccattagat 40257784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 40320451 - 40320410
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||| ||||| ||||||||||||||||||| |||||    
T  40320451 tttagcatgggaaaggagagttgtttcccaccatggaaaagt 40320410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 47343224 - 47343183
Alignment:
Q  152 attatgcaatgtttttaccaatcgagttaagttcacagtgac 193  Q
    |||||||| ||| ||||||||| |||||||||||||||||||    
T  47343224 attatgcactgtctttaccaattgagttaagttcacagtgac 47343183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 5063323 - 5063371
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    ||||||||||||| |||||| |||  ||| |||||||||||||||||||    
T  5063323 ggtggcatttagcctggaaatgggatgttttttcccaccatgggaaagt 5063371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 6730198 - 6730162
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatggg 243  Q
    |||||||||| |||||| |||||||||||||||||||    
T  6730198 tttagcatgggaaagggaagttgtttcccaccatggg 6730162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 36844619 - 36844659
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaag 247  Q
    |||||||||| ||||| |||||||||||||||||| |||||    
T  36844619 tttagcatgggaaaggtgagttgtttcccaccatgagaaag 36844659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 43846963 - 43846916
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||| |||||| ||| ||||||||||| |||||||||||||||||||    
T  43846963 ggtggcgtttagcctgggaaaggggagtt-tttcccaccatgggaaagt 43846916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 46759310 - 46759274
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttccca 236  Q
    |||||||||||| |||| |||||||||||||||||||    
T  46759310 ggtggcatttagtatgggaaaggggagttgtttccca 46759274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 276
Target Start/End: Complemental strand, 36272595 - 36272519
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagatttaggaggat 276  Q
    ||||||||||||||||| || ||| | ||||||||||||||||||||||| |||||||||||| |||| | ||||||    
T  36272595 ggtggcatttagcatgggaatgggaacttgtttcccaccatgggaaagtattttttggccatctgattaaagaggat 36272519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 276
Target Start/End: Complemental strand, 6768166 - 6768090
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagatttaggaggat 276  Q
    ||||||||||||||||| || ||| | || |||||||||||||||||||| |||||||||||| |||| | ||||||    
T  6768166 ggtggcatttagcatgggaatgggaacttatttcccaccatgggaaagtattttttggccatctgattaaagaggat 6768090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 4640535 - 4640582
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttt 254  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  4640535 tttagcatggtaaaggggaattgtttcccaccatgggaaagtaatttt 4640582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 4641803 - 4641756
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttt 254  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||||||    
T  4641803 tttagcatgggaaaggggaattgtttcccaccaagggaaagtaatttt 4641756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 29334214 - 29334269
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagtaattttt 255  Q
    ||||||||||||||||| || ||  |||||||||||||||||||||||||| ||||    
T  29334214 ggtggcatttagcatgggaatggatagttgtttcccaccatgggaaagtaaatttt 29334269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 43316357 - 43316412
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagtaattttt 255  Q
    ||||||||||||||||| || ||  |||||||||||||||||||||||||| ||||    
T  43316357 ggtggcatttagcatgggaatggatagttgtttcccaccatgggaaagtaaatttt 43316412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 50950145 - 50950200
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagtaattttt 255  Q
    |||||||||||||||||||| ||  |||||||||||||||||| ||||||| ||||    
T  50950145 ggtggcatttagcatggaaatggatagttgtttcccaccatggaaaagtaaatttt 50950200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 249
Target Start/End: Original strand, 30466189 - 30466231
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagta 249  Q
    |||||||||| || |||||||||||||||||||||||||||||    
T  30466189 tttagcatgggaatggggagttgtttcccaccatgggaaagta 30466231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 38932178 - 38932121
Alignment:
Q  198 gtggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagtaattttt 255  Q
    ||||||||||||||||||| ||| || |||||||| ||||||| ||||||| ||||||    
T  38932178 gtggtggcatttagcatgggaaaaggaagttgttttccaccataggaaagtcattttt 38932121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 47334206 - 47334247
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||| |||||||||||||||||||||||| ||||||||||    
T  47334206 tttagcctggaaaaggggagttgtttcccacaatgggaaagt 47334247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 11031431 - 11031479
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    ||||||||||| ||||| |||||||| | ||||||||||||||||||||    
T  11031431 ggtggcatttaacatgggaaaggggaatagtttcccaccatgggaaagt 11031479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 11032267 - 11032219
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    ||||||||||| ||||| |||||||| | ||||||||||||||||||||    
T  11032267 ggtggcatttaacatgggaaaggggaatagtttcccaccatgggaaagt 11032219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 47334948 - 47334900
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||||| |||| ||| ||||||||||||||||||| |||||||    
T  47334948 ggtggcatttagtatgggaaaagggagttgtttcccaccataggaaagt 47334900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 163
Target Start/End: Original strand, 4865822 - 4865865
Alignment:
Q  120 tgttcggagttcgaactccaacccctacgtatattatgcaatgt 163  Q
    ||||||| ||||||||||| |||||||| |||||||||||||||    
T  4865822 tgttcggggttcgaactccgacccctacatatattatgcaatgt 4865865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 11426853 - 11426900
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaag 247  Q
    |||||||||||||||||||||||| |   |||||||||||||||||||    
T  11426853 ggtggcatttagcatggaaaagggaaagagtttcccaccatgggaaag 11426900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 38931321 - 38931362
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||  |||||||| ||||||||||||||||||||||    
T  38931321 tttagcatgagaaaggggaattgtttcccaccatgggaaagt 38931362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 41884270 - 41884229
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    ||||||||||||||||| | |||||||||||||| |||||||    
T  41884270 tttagcatggaaaagggaaattgtttcccaccataggaaagt 41884229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 48835138 - 48835097
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||| |||||||| |||||| |||||||||||||||    
T  48835138 tttagcatgggaaaggggaattgttttccaccatgggaaagt 48835097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 294624 - 294672
Alignment:
Q  199 tggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaag 247  Q
    ||||||| ||||| |||| || |||||||| ||||||||||||||||||    
T  294624 tggtggcgtttagtatgggaatggggagttttttcccaccatgggaaag 294672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 7464119 - 7464051
Alignment:
Q  199 tggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagatt 267  Q
    |||||||||||| |||||||||||| |   ||||||||||||||||||   | ||||| ||||||||||    
T  7464119 tggtggcatttaacatggaaaagggaaagagtttcccaccatgggaaaactaattttgaccatcagatt 7464051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 36153945 - 36153897
Alignment:
Q  199 tggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaag 247  Q
    |||||||||||||| ||| ||  ||||||| ||||||||||||||||||    
T  36153945 tggtggcatttagcctgggaatagggagttttttcccaccatgggaaag 36153897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 24125972 - 24126074
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagatttaggaggatcgttgattttagtataatctacc 299  Q
    |||||||||||   ||| ||||||||||||||||||||||||||||||| |||||  ||||| ||||||| ||||| | || |||||| |||| |||| |    
T  24125972 ggtggcatttaatttgggaaaggggagttgtttcccaccatgggaaagttattttcagccattagatttaagaggaacattaattttattatagtctatc 24126071  T
Q  300 cac 302  Q
    |||    
T  24126072 cac 24126074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 283
Target Start/End: Complemental strand, 8384059 - 8383983
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagatttaggaggatcgttgat 283  Q
    |||||||||| |||| |||||||||||||||||||| ||| || |||||| |  | ||||||| |||||||||||||    
T  8384059 tttagcatgggaaagtggagttgtttcccaccatggaaaaatattttttgacggttagatttaagaggatcgttgat 8383983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 29290130 - 29290171
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  29290130 tttagcatggaaatggagagttgtttcccaccatgggaaagt 29290171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 6329839 - 6329902
Alignment:
Q  97 ttttaaatgtggtaaaaatagaatgttcggagttcgaactccaacccctacgtatattatgcaat 161  Q
    |||||||||||| | || |||||||| ||| |||| ||||||||||||||| |||||||||||||    
T  6329839 ttttaaatgtgg-agaagtagaatgtacggggttcaaactccaacccctacatatattatgcaat 6329902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 24126767 - 24126718
Alignment:
Q  199 tggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    ||||||||||||   ||| ||||||||||||||||||| |||||||||||    
T  24126767 tggtggcatttaatttgggaaaggggagttgtttcccatcatgggaaagt 24126718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 266
Target Start/End: Original strand, 4789527 - 4789586
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagat 266  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||| ||| |||| ||||    
T  4789527 tttagcatgggaaaggggagttgtttcccaccatgggaaagttattcttgaccattagat 4789586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 266
Target Start/End: Original strand, 6804898 - 6804957
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagat 266  Q
    |||||||||| |||| |||||||||||||||||||| |||||| |||||| |||||||||    
T  6804898 tttagcatgggaaagaggagttgtttcccaccatggaaaagtactttttgaccatcagat 6804957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 1970563 - 1970514
Alignment:
Q  199 tggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||||||||||| || || |||||||||||||||||||||||||    
T  1970563 tggtggcatttagcatgggaatggagagttgtttcccaccatgggaaagt 1970514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 9142047 - 9142094
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaag 247  Q
    |||||||||||| |||| |||||| |||||||||||||||||||||||    
T  9142047 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 9142094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 296
Target Start/End: Complemental strand, 473093 - 472996
Alignment:
Q  199 tggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagatttaggaggatcgttgattttagtataatct 296  Q
    ||||||||||||  |||| |||||| ||| |||||||||||| | |||||| ||||| ||||||||||| | ||||| |  |||| ||| ||||||||    
T  473093 tggtggcatttaatatgggaaagggaagtcgtttcccaccatagaaaagtattttttagccatcagattaaagaggaccactgatcttattataatct 472996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 4607184 - 4607136
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    ||||||||||||||||| || || |||||||||||||||||| ||||||    
T  4607184 ggtggcatttagcatgggaatggagagttgtttcccaccatgagaaagt 4607136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 26712429 - 26712389
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaag 247  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  26712429 tttagcatgggaaagggaagttgtttcccaccatgggaaag 26712389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 26982167 - 26982127
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaag 247  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  26982167 tttagcatgggaaagggaagttgtttcccaccatgggaaag 26982127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 4555437 - 4555390
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaag 247  Q
    |||||||||||| |||| |||||| |||||||||| ||||||||||||    
T  4555437 ggtggcatttagtatgggaaagggaagttgtttcctaccatgggaaag 4555390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 6804880 - 6804814
Alignment:
Q  201 gtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagatt 267  Q
    ||||||||||||||||   || | |||||||||||||||||||||||| | ||||| |||| |||||    
T  6804880 gtggcatttagcatgggtcagtgaagttgtttcccaccatgggaaagtcaattttgaccattagatt 6804814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 187
Target Start/End: Original strand, 29667894 - 29667932
Alignment:
Q  149 tatattatgcaatgtttttaccaatcgagttaagttcac 187  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  29667894 tatattatgcattgtttttaccaattgagttaagttcac 29667932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 9924171 - 9924124
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    ||||||||||||||||| |  || |||||||||||||||||||||||||    
T  9924171 ggtggcatttagcatgggat-ggagagttgtttcccaccatgggaaagt 9924124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 32943517 - 32943565
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    ||||| ||||||||||| |||||  | ||||||||||||||||||||||    
T  32943517 ggtgggatttagcatgggaaaggatatttgtttcccaccatgggaaagt 32943565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 35262459 - 35262519
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagatt 267  Q
    |||||||||| |||||  | |||||||| ||||||||||||| ||||||| |||| |||||    
T  35262459 tttagcatgggaaaggataattgtttcctaccatgggaaagttatttttgaccattagatt 35262519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 7868189 - 7868134
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagtaattttt 255  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||||||||| ||||    
T  7868189 ggtgggatttagcatgagaaaggggagttgtttcccaccatgggaaagtaaatttt 7868134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 39635365 - 39635308
Alignment:
Q  125 ggagttcgaactccaacccctacgtatattatgcaatgtttttaccaatcgagttaag 182  Q
    ||||||||||| || ||||| || ||||||||||||||||||||||||| ||||||||    
T  39635365 ggagttcgaaccccgaccccaacatatattatgcaatgtttttaccaattgagttaag 39635308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 36390964 - 36391012
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaattttt 255  Q
    |||||||||| |||||| |||||||||||||||||||||||||| ||||    
T  36390964 tttagcatgggaaagggaagttgtttcccaccatgggaaagtaaatttt 36391012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 5005462 - 5005509
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaag 247  Q
    ||||||||||||||||| |||||||| |||||||||| ||||||||||    
T  5005462 ggtggcatttagcatgggaaaggggaattgtttcccatcatgggaaag 5005509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 23462405 - 23462467
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatc 262  Q
    |||| ||||||||||||||| ||| | |||||| | |||||||||||||| ||||||||||||    
T  23462405 ggtgacatttagcatggaaatgggaacttgttttctaccatgggaaagtattttttggccatc 23462467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 37546613 - 37546564
Alignment:
Q  199 tggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    ||||||||||||  |||| ||||||||||||||||||| |||||||||||    
T  37546613 tggtggcatttaaaatgggaaaggggagttgtttcccatcatgggaaagt 37546564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 20991287 - 20991335
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    ||||||||||||||||| || || ||||||||| |||||||||||||||    
T  20991287 ggtggcatttagcatgggaatggagagttgttttccaccatgggaaagt 20991335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 23876104 - 23876064
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaag 247  Q
    |||||||||| ||| ||||||||||||||||||||||||||    
T  23876104 tttagcatgggaaatgggagttgtttcccaccatgggaaag 23876064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 34617660 - 34617720
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagatt 267  Q
    |||||||||| |||||  | |||||||||||||||||||||| ||||||| |||| |||||    
T  34617660 tttagcatgggaaaggataattgtttcccaccatgggaaagttatttttgaccattagatt 34617720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 36391713 - 36391665
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaattttt 255  Q
    ||||| |||| ||||||||||||||| ||||||||||||||||| ||||    
T  36391713 tttagtatgggaaaggggagttgttttccaccatgggaaagtaaatttt 36391665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 41768792 - 41768724
Alignment:
Q  199 tggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagatt 267  Q
    ||||||||||||||||||   || | |||||||||||||||||||||||| | ||||| |||| |||||    
T  41768792 tggtggcatttagcatgggtcagtgaagttgtttcccaccatgggaaagtcaattttgaccattagatt 41768724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 172
Target Start/End: Original strand, 6973127 - 6973170
Alignment:
Q  129 ttcgaactccaacccctacgtatattatgcaatgtttttaccaa 172  Q
    |||||||||| |||||| ||||||||||||||||||| ||||||    
T  6973127 ttcgaactccgacccctgcgtatattatgcaatgtttataccaa 6973170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 7867170 - 7867217
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaag 247  Q
    ||||| ||||||||||||||||||||||| ||| | ||||||||||||    
T  7867170 ggtggaatttagcatggaaaaggggagttattttctaccatgggaaag 7867217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 266
Target Start/End: Complemental strand, 15602861 - 15602802
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagat 266  Q
    |||||||| | |||||| |||||||||||||||||||||| || |||||| |||| ||||    
T  15602861 tttagcataggaaagggaagttgtttcccaccatgggaaaatattttttgaccattagat 15602802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 42370973 - 42370932
Alignment:
Q  225 agttgtttcccaccatgggaaagtaatttttggccatcagat 266  Q
    |||||||||||||||||||||||||| | |||||||| ||||    
T  42370973 agttgtttcccaccatgggaaagtaaatattggccattagat 42370932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 4769100 - 4769052
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    ||||||||||| |||||||||||||| |  ||||||||||| |||||||    
T  4769100 ggtggcatttaacatggaaaaggggaatcctttcccaccataggaaagt 4769052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 6085742 - 6085702
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaag 247  Q
    |||||||||| ||||| ||||||||||| ||||||||||||    
T  6085742 tttagcatgggaaaggtgagttgtttcctaccatgggaaag 6085702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 36476795 - 36476747
Alignment:
Q  199 tggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaag 247  Q
    |||| ||||||||| | ||||||||||||| ||||||| ||||||||||    
T  36476795 tggttgcatttagcctagaaaaggggagttctttcccatcatgggaaag 36476747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 37545676 - 37545724
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||||  || | |||||| ||||||||||||||||||||||||    
T  37545676 ggtggcatttaaaataggaaagggaagttgtttcccaccatgggaaagt 37545724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 44022135 - 44022089
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaa 246  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  44022135 ggtggcatttagcatggaaaaggagagttgttttccaccatgggaaa 44022089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 43768025 - 43768074
Alignment:
Q  199 tggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||||||||||| || || |||||||||||||||||||||||||    
T  43768025 tggtggcatttagcatgggaatggagagttgtttcccaccatgggaaagt 43768074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 267
Target Start/End: Complemental strand, 52399076 - 52399009
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagatt 267  Q
    |||||||||||||||||||||||| |   |||||||| ||||||||||||| ||||| |||| |||||    
T  52399076 ggtggcatttagcatggaaaagggaaagagtttcccatcatgggaaagtaaattttgaccattagatt 52399009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 49161849 - 49161808
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  49161849 tttagcatgggaaaggggaattgtttcccaccatgggaaagt 49161808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 8653761 - 8653713
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaattttt 255  Q
    ||||||||||||||||||  ||||||||||||||| |||||||| ||||    
T  8653761 tttagcatggaaaagggggattgtttcccaccatgagaaagtaaatttt 8653713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 44407008 - 44406952
Alignment:
Q  199 tggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagtaattttt 255  Q
    |||||||||||||||||| ||  |  |||||||||||||||||||||||||| ||||    
T  44407008 tggtggcatttagcatgggaatagatagttgtttcccaccatgggaaagtaaatttt 44406952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 187
Target Start/End: Original strand, 23653216 - 23653283
Alignment:
Q  120 tgttcggagttcgaactccaacccctacgtatattatgcaatgtttttaccaatcgagttaagttcac 187  Q
    ||||||| |||||||| || |||||| | |||||||||||||||| |||||||  |||||||| ||||    
T  23653216 tgttcggggttcgaaccccgacccctgcatatattatgcaatgttcttaccaactgagttaagctcac 23653283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 266
Target Start/End: Original strand, 33968188 - 33968247
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagat 266  Q
    |||||||||| |||||| | |||||||||||||||||||| || |||||| |||| ||||    
T  33968188 tttagcatgggaaagggaacttgtttcccaccatgggaaaatattttttgaccattagat 33968247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 250
Target Start/End: Complemental strand, 45501335 - 45501292
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaa 250  Q
    ||||| |||| ||||||||||||||| |||||||||||||||||    
T  45501335 tttagtatgggaaaggggagttgttttccaccatgggaaagtaa 45501292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 51420861 - 51420916
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagtaattttt 255  Q
    ||||||||||||||||| ||| || |||||||| ||||||| ||||||| ||||||    
T  51420861 ggtggcatttagcatgggaaaaggaagttgttttccaccataggaaagtcattttt 51420916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 31598835 - 31598794
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||||||||   ||||||||||||||||||||||||    
T  31598835 tttagcatggaaaagaaaagttgtttcccaccatgggaaagt 31598794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 33455822 - 33455781
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||| |||||||| |||||||||||||| |||||||    
T  33455822 tttagcatgggaaaggggaattgtttcccaccataggaaagt 33455781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 49189549 - 49189496
Alignment:
Q  119 atgttcggagttcgaactccaacccctacgtatattatgcaatgtttttaccaa 172  Q
    ||||||||||||||||||||||  | | | ||||||||||||||||| ||||||    
T  49189549 atgttcggagttcgaactccaattcttgcttatattatgcaatgtttctaccaa 49189496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 51421716 - 51421675
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||  |||||||| ||||||||||||||||||||||    
T  51421716 tttagcatgagaaaggggaattgtttcccaccatgggaaagt 51421675  T

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Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 8652817 - 8652865
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaattttt 255  Q
    |||||||||| |||||||| | | |||||||||||||||||||| ||||    
T  8652817 tttagcatgggaaaggggaatcggttcccaccatgggaaagtaaatttt 8652865  T

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Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 49160994 - 49161034
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaag 247  Q
    |||||||||| ||||||||||||||||| ||||||| ||||    
T  49160994 tttagcatgggaaaggggagttgtttcctaccatggaaaag 49161034  T

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Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 42345393 - 42345442
Alignment:
Q  199 tggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||||||||||| || || |||||||||||||||||||||||||    
T  42345393 tggtggcatttagcatgggaatggagagttgtttcccaccatgggaaagt 42345442  T

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Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 7054090 - 7054138
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    ||||||||||||||||| || || ||||||||||||||||||| |||||    
T  7054090 ggtggcatttagcatgggaatggagagttgtttcccaccatggaaaagt 7054138  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 261
Target Start/End: Original strand, 35943083 - 35943137
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccat 261  Q
    |||||||||| |||||| ||||||||||||||||||| ||||  |||||| ||||    
T  35943083 tttagcatgggaaagggaagttgtttcccaccatggggaagttttttttgtccat 35943137  T

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Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 35840571 - 35840530
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    |||||||||| |||||| ||||||||||||| ||||||||||    
T  35840571 tttagcatgggaaagggaagttgtttcccacgatgggaaagt 35840530  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 13935101 - 13935053
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    ||||||||||||||||| |||||  |||||||| ||||||| |||||||    
T  13935101 ggtggcatttagcatgggaaaggaaagttgttttccaccataggaaagt 13935053  T

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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 34364721 - 34364661
Alignment:
Q  207 tttagcatggaaaaggggagttgtttcccaccatgggaaagtaatttttggccatcagatt 267  Q
    ||||| ||||||||||| |||||||| ||| ||||| ||| || ||||||||||| |||||    
T  34364721 tttagaatggaaaagggaagttgttttccatcatggaaaaatattttttggccattagatt 34364661  T

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Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 43433811 - 43433859
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagt 248  Q
    ||||||||||| ||||| |||||||| |  |||||||||||||||||||    
T  43433811 ggtggcatttaacatgggaaaggggaatcatttcccaccatgggaaagt 43433859  T

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Target: scaffold0129 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 43268 - 43216
Alignment:
Q  198 gtggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagtaa 250  Q
    |||||||  ||||| |||||||||||||||||||||||| |||||||||||||    
T  43268 gtggtggggtttagtatggaaaaggggagttgtttcccatcatgggaaagtaa 43216  T

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Target: scaffold2003 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold2003
Description:

Target: scaffold2003; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 579 - 524
Alignment:
Q  200 ggtggcatttagcatggaaaaggggagttgtttcccaccatgggaaagtaattttt 255  Q
    ||||| ||| ||||||| ||||||||||||||||||||||||| ||||||| ||||    
T  579 ggtgggattaagcatgggaaaggggagttgtttcccaccatggaaaagtaaatttt 524  T

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Target: scaffold0150 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 242
Target Start/End: Original strand, 14011 - 14054
Alignment:
Q  199 tggtggcatttagcatggaaaaggggagttgtttcccaccatgg 242  Q
    |||||| ||||||||||| |||||||||||||||||||||||||    
T  14011 tggtgggatttagcatgggaaaggggagttgtttcccaccatgg 14054  T

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