View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2507_low_13 (Length: 296)
Name: NF2507_low_13
Description: NF2507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2507_low_13 |
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Alignment Details
Target: chr6 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 12 - 279
Target Start/End: Original strand, 979617 - 979884
Alignment:
| Q |
12 |
atgaagagggaaaatgttctctgaaagaaaaatgaagacaaacccaacactataatttactnnnnnnnnttagagatgaatggagtacctggaagaccaa |
111 |
Q |
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| T |
979617 |
atgaagagggaaaatgttctctgaaagaaaaatgaagacaaacccaacactataatttactaaaaaaaattagagatgaatggagtaccttgaagaccaa |
979716 |
T |
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| Q |
112 |
atagccactacaaatttttcaaaacagaactccaaaaactggcgacaatgatttctcatgaacactgaaaaaacaacaccagattagtaaagagaataag |
211 |
Q |
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| T |
979717 |
atagccactacaattttttcaaaacagaactccaaaaactggtgacaatgatttctcatgaacactaaaaaaacaacaccaaattagtaaagagaataat |
979816 |
T |
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| Q |
212 |
ctcattagagatgatgggcagaaagtaaaaagaatcaatcacatccacgattttacaattattgatgg |
279 |
Q |
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| T |
979817 |
ctcattagagatgatgggcagaaagtaaaaagaatcaatcacttccacgattttacaattattgatgg |
979884 |
T |
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