View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2508_low_11 (Length: 250)
Name: NF2508_low_11
Description: NF2508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2508_low_11 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 43 - 250
Target Start/End: Complemental strand, 19643982 - 19643775
Alignment:
| Q |
43 |
cttgaatcccgtaaaaggaccacaaaagatggcgacatgcgcagacaaacaatgcttcaaaaagcgtgactcctaagcacgatcatcatcgatgattcca |
142 |
Q |
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| T |
19643982 |
cttgaatcccgtaaaaggaccacaaaagatggccacatgcgcagacaaacaatgcttcaaaaagcgtgactcataagcacgatcatcatcgatgattcca |
19643883 |
T |
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| Q |
143 |
ctaggatcctttgaacgacgaaaccatgatatcgactttaggacgcatgttagtgtgactatcaaaattaaactcttgtaaaatatgtagtaggtgatac |
242 |
Q |
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| T |
19643882 |
ctaggatccttcgaacgacgaaaccatgataccgactttaggacatatgttagcatgactatcaaaattaaactcttgtaaaatatgtagtaggtgatac |
19643783 |
T |
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| Q |
243 |
taattctt |
250 |
Q |
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| T |
19643782 |
taattctt |
19643775 |
T |
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