View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2509_high_17 (Length: 207)
Name: NF2509_high_17
Description: NF2509
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2509_high_17 |
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Alignment Details
Target: chr4 (Bit Score: 179; Significance: 8e-97; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 179; E-Value: 8e-97
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 35815857 - 35815679
Alignment:
| Q |
15 |
aggcaaagttggaaagaatttagctaaaaaagttaaaatctgaggaattggccatttgggtctaaccttatcagagattttacacatgggtgctaccaaa |
114 |
Q |
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| T |
35815857 |
aggcaaagttggaaagaatttagctaaaaaagttaaaatctgaggaattggccatttgggtctaaccttatcagagattttacacatgggtgctaccaaa |
35815758 |
T |
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| Q |
115 |
atagcaccttgaaacccttttggatcagcaaaatgaatcaaaagactaatagcaccacccattgattcaccatataaaa |
193 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35815757 |
atagcaccttgaaacccttttggatcagcaaaatgaatcaaaagactaatagcaccacccattgattcaccatataaaa |
35815679 |
T |
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