View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2509_high_8 (Length: 249)
Name: NF2509_high_8
Description: NF2509
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2509_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 18645587 - 18645348
Alignment:
| Q |
1 |
gcaaggtagcagaatactataaacaacaggagaagctccttgagggctataatgacatggatactatgactgaaacaggactttttccaggaagtcttac |
100 |
Q |
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| T |
18645587 |
gcaaggtagcagaatactataaacaacaggagaagctccttgagggctataatgacatggatactatgactgaaacaggactttttccaggaagtcttac |
18645488 |
T |
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| Q |
101 |
cgaggtagattttttattttgtcaccataattgcgggcgcgattgataccaatgtgccagcaataacacaactgaaacacgctccttgattttgtagcaa |
200 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||| |
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| T |
18645487 |
cgaggtagattgtttattttgtcaccataattgcgggcgcgattgataccaatgtgccaccaataacacgactgaaaaacgctccttgattttgtagcaa |
18645388 |
T |
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| Q |
201 |
atgtggccaatgcggaagcaatttctgttgtcatttcatt |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
18645387 |
atgtggccaatgcggaagcaatttctgttgtcatttcatt |
18645348 |
T |
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