View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2509_low_5 (Length: 398)

Name: NF2509_low_5
Description: NF2509
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2509_low_5
NF2509_low_5
[»] chr4 (11 HSPs)
chr4 (1-377)||(32273164-32273532)
chr4 (306-369)||(28964188-28964251)
chr4 (307-375)||(3947702-3947770)
chr4 (306-369)||(23292926-23292989)
chr4 (306-369)||(16073450-16073513)
chr4 (307-365)||(30982808-30982866)
chr4 (304-369)||(49431082-49431147)
chr4 (304-364)||(715543-715603)
chr4 (304-364)||(752869-752929)
chr4 (308-340)||(7424742-7424774)
chr4 (329-369)||(27706129-27706169)
[»] chr2 (6 HSPs)
chr2 (302-368)||(26769579-26769645)
chr2 (305-369)||(24009351-24009415)
chr2 (306-369)||(30717459-30717522)
chr2 (307-369)||(28596525-28596587)
chr2 (308-369)||(2438661-2438722)
chr2 (306-342)||(19536361-19536397)
[»] chr7 (8 HSPs)
chr7 (306-375)||(5409771-5409840)
chr7 (306-375)||(9778555-9778624)
chr7 (304-369)||(24339709-24339774)
chr7 (305-369)||(21880208-21880272)
chr7 (306-364)||(29763129-29763187)
chr7 (306-375)||(32093954-32094024)
chr7 (306-375)||(43027404-43027473)
chr7 (306-346)||(35862030-35862070)
[»] chr8 (4 HSPs)
chr8 (306-369)||(34450961-34451024)
chr8 (306-369)||(15816058-15816121)
chr8 (306-369)||(36450694-36450757)
chr8 (307-369)||(29447040-29447102)
[»] chr3 (8 HSPs)
chr3 (306-369)||(40993275-40993338)
chr3 (308-366)||(28918062-28918120)
chr3 (306-369)||(7171557-7171620)
chr3 (306-369)||(55401131-55401194)
chr3 (306-360)||(5407199-5407253)
chr3 (306-368)||(41961579-41961641)
chr3 (307-364)||(15999951-16000008)
chr3 (306-375)||(27505301-27505370)
[»] chr1 (13 HSPs)
chr1 (307-365)||(40258874-40258932)
chr1 (304-341)||(1704933-1704970)
chr1 (308-375)||(1486646-1486713)
chr1 (306-369)||(22515827-22515890)
chr1 (306-369)||(25934683-25934746)
chr1 (306-369)||(32461393-32461456)
chr1 (306-369)||(37598887-37598950)
chr1 (306-369)||(51410081-51410144)
chr1 (308-369)||(16297223-16297284)
chr1 (307-367)||(10577676-10577736)
chr1 (306-342)||(27965940-27965976)
chr1 (306-366)||(40917819-40917879)
chr1 (307-343)||(48415667-48415703)
[»] scaffold0003 (1 HSPs)
scaffold0003 (304-369)||(241661-241726)
[»] chr6 (7 HSPs)
chr6 (306-375)||(17327590-17327659)
chr6 (307-366)||(31384989-31385048)
chr6 (306-368)||(8365448-8365510)
chr6 (304-369)||(34595190-34595255)
chr6 (306-342)||(5732474-5732510)
chr6 (306-342)||(10649371-10649407)
chr6 (309-369)||(32978842-32978902)
[»] chr5 (7 HSPs)
chr5 (305-377)||(31084376-31084448)
chr5 (306-369)||(21576685-21576748)
chr5 (306-369)||(28588614-28588677)
chr5 (306-369)||(39698608-39698671)
chr5 (307-369)||(6401565-6401627)
chr5 (307-369)||(21542097-21542159)
chr5 (305-365)||(42893420-42893480)
[»] scaffold0380 (1 HSPs)
scaffold0380 (306-364)||(8662-8720)
[»] scaffold0306 (1 HSPs)
scaffold0306 (308-369)||(13462-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (308-369)||(21804-21865)
[»] scaffold0793 (1 HSPs)
scaffold0793 (304-364)||(4819-4879)
[»] scaffold0361 (1 HSPs)
scaffold0361 (305-369)||(14583-14647)


Alignment Details
Target: chr4 (Bit Score: 332; Significance: 0; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 1 - 377
Target Start/End: Original strand, 32273164 - 32273532
Alignment:
Q  1 cataaaacaattaatagtattatcaaccctaacaattaatattaccatatggatgggcacacaattcaaagttggtcttgcccttatagacactctcctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32273164 cataaaacaattaatagtattatcaaccctaacaattaatat--------ggatgggcacacaattcaaagttggtcttgcccttatagacactctcctc 32273255  T
Q  101 aaccctagaccctacctatatgatgataatgatatcgtccatacttcaaagacctctaacgtttatacccttccttcgttagcctaagatactatttcgg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32273256 aaccctagaccctacctatatgatgataatgatatcgtccatacttcaaagacctctaacgtttatacccttccttcgttagcctaagatactatttcgg 32273355  T
Q  201 agctccatcttaagtatttgtaggaaccatcgtagtttcaaatcgtatggagtaatatccgattcatttatcttaagtttaaatacatgaatagacggtt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32273356 agctccatcttaagtatttgtaggaaccatcgtagtttcaaatcgtatggagtaatatccgattcatttatcttaagtttaaatacatgaatagacggtt 32273455  T
Q  301 atcatctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatc 377  Q
    |||||||||||||||  ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  32273456 atcatctatgaagcaccgacactccttggatttgtcgtgtccccgtatcggatacgtgtcgtgtccgactcgacatc 32273532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 306 - 369
Target Start/End: Original strand, 28964188 - 28964251
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    ||||||||||||||||||||| ||||| |||||||||  || ||||||| ||||||||||||||    
T  28964188 ctatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgac 28964251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 307 - 375
Target Start/End: Original strand, 3947702 - 3947770
Alignment:
Q  307 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgaca 375  Q
    ||||||||| |||||||||| ||||| || ||||||| || ||||| |||||||||||||||| |||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacacgaca 3947770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 369
Target Start/End: Original strand, 23292926 - 23292989
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||||||||| |||||||||| ||||| |||||||||  || ||||| ||||||||||||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgac 23292989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 369
Target Start/End: Complemental strand, 16073513 - 16073450
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    ||||||||||||||||||||| ||||| |||||||| | || ||||| | || |||||||||||    
T  16073513 ctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgac 16073450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 365
Target Start/End: Original strand, 30982808 - 30982866
Alignment:
Q  307 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtc 365  Q
    ||||||||| |||||||| ||||||| |||||||||  || ||||| ||||||||||||    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 30982866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 369
Target Start/End: Complemental strand, 49431147 - 49431082
Alignment:
Q  304 atctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||||| |||||||||||||||| ||||  |||||||||  || | ||| ||||||||||||||||    
T  49431147 atctataaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgac 49431082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 715543 - 715603
Alignment:
Q  304 atctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgt 364  Q
    |||||||||||| |||||||||| ||||| |||||||||  || ||||| | |||||||||    
T  715543 atctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 715603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 752869 - 752929
Alignment:
Q  304 atctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgt 364  Q
    |||||||||||| |||||||||| ||||| |||||||||  || ||||| | |||||||||    
T  752869 atctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 752929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 340
Target Start/End: Complemental strand, 7424774 - 7424742
Alignment:
Q  308 atgaagcatggacactccttggatttggcgtgt 340  Q
    ||||||||||||||||||||||||| |||||||    
T  7424774 atgaagcatggacactccttggattaggcgtgt 7424742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 369
Target Start/End: Original strand, 27706129 - 27706169
Alignment:
Q  329 gatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||| |||||||||  |||||||||||||||||||||||||    
T  27706129 gattaggcgtgtcccggtatcggatacgtgtcgtgtccgac 27706169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 368
Target Start/End: Complemental strand, 26769645 - 26769579
Alignment:
Q  302 tcatctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccga 368  Q
    |||||||||||||| |||||||||| ||||| |||||||||  || ||||| |||||||||||||||    
T  26769645 tcatctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccga 26769579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 305 - 369
Target Start/End: Complemental strand, 24009415 - 24009351
Alignment:
Q  305 tctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    ||||||||||| |||||||||||||||  ||||||||| ||| || || ||||||||||||||||    
T  24009415 tctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgac 24009351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 369
Target Start/End: Original strand, 30717459 - 30717522
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||||||||| |||||||||||||||| ||||| |||  || ||| | ||||||||||||||||    
T  30717459 ctatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgac 30717522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 369
Target Start/End: Complemental strand, 28596587 - 28596525
Alignment:
Q  307 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    ||||||||| |||||||||| ||||| || ||||||  || ||||| ||||||||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgac 28596525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 369
Target Start/End: Original strand, 2438661 - 2438722
Alignment:
Q  308 atgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||||||| |||||||||| ||||| |||||||||  || ||||| | ||||||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgac 2438722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 342
Target Start/End: Original strand, 19536361 - 19536397
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcc 342  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  19536361 ctatgaagcatggacactcctcggattaggcgtgtcc 19536397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 375
Target Start/End: Original strand, 5409771 - 5409840
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgaca 375  Q
    |||||||||| |||||||||| ||||| |||||||||  || ||||| |||||||||||||||| |||||    
T  5409771 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgaca 5409840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 375
Target Start/End: Complemental strand, 9778624 - 9778555
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgaca 375  Q
    |||||||||| |||||||||||||||| |||||||||  || ||||| |||||| ||||||||| |||||    
T  9778624 ctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacacgaca 9778555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 369
Target Start/End: Complemental strand, 24339774 - 24339709
Alignment:
Q  304 atctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||||||||||| || ||||||| ||||| |||||||||  || ||||||||||||||||||||||    
T  24339774 atctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgac 24339709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 369
Target Start/End: Complemental strand, 21880272 - 21880208
Alignment:
Q  305 tctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    ||||||||||| ||||||| || ||||| |||||||||| || ||||| | ||||||||||||||    
T  21880272 tctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgac 21880208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 29763129 - 29763187
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgt 364  Q
    |||||||||| |||||||||| ||||| ||||||||||  | ||||| |||||||||||    
T  29763129 ctatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtcgtgt 29763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 375
Target Start/End: Original strand, 32093954 - 32094024
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcg-tatcggatacgtgtcgtgtccgactcgaca 375  Q
    |||||||||| | |||||||| ||||| ||||||||| || | ||||| |||||||||||||||| |||||    
T  32093954 ctatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacacgaca 32094024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 375
Target Start/End: Original strand, 43027404 - 43027473
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgaca 375  Q
    |||||||||| |||||||| | ||||| |||||||||  || ||||| |||||||||||| ||| |||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacacgaca 43027473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 35862070 - 35862030
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgt 346  Q
    |||||||||| |||||||||| ||||| |||||||||||||    
T  35862070 ctatgaagcacggacactcctcggattaggcgtgtcctcgt 35862030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 369
Target Start/End: Original strand, 34450961 - 34451024
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||||||||| |||||||||||||||  ||||||||| ||| || || ||||||||||||||||    
T  34450961 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgac 34451024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 369
Target Start/End: Original strand, 15816058 - 15816121
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||||||||| ||||||| || ||||| |||||||||  || |||||| |||||||||||||||    
T  15816058 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgac 15816121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 369
Target Start/End: Original strand, 36450694 - 36450757
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    ||||||||||  ||||||||| ||||| |||||||||| || ||||| ||| ||||||||||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgac 36450757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 369
Target Start/End: Original strand, 29447040 - 29447102
Alignment:
Q  307 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    ||||||||| |||||||||| ||||| |||||||||| || || || || |||||||||||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgac 29447102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000004; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 369
Target Start/End: Original strand, 40993275 - 40993338
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    ||||||||||||||||||||| ||||| |||||||||  || ||||| | ||||||||||||||    
T  40993275 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgac 40993338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 366
Target Start/End: Complemental strand, 28918120 - 28918062
Alignment:
Q  308 atgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtcc 366  Q
    |||||||| |||||||||||||||| |||||||||  || ||||| |||||||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtcc 28918062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 369
Target Start/End: Complemental strand, 7171620 - 7171557
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||||||||||  |||||||||||||| ||||||||   || ||||| ||||||||||||||||    
T  7171620 ctatgaagcatatacactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgac 7171557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 369
Target Start/End: Complemental strand, 55401194 - 55401131
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||||||||| |||||||||| ||||| ||||||||   || ||||| ||||||||||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgac 55401131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 360
Target Start/End: Original strand, 5407199 - 5407253
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtc 360  Q
    ||||||||||||||||||| ||||||| |||||||||| |  ||||| |||||||    
T  5407199 ctatgaagcatggacactctttggattaggcgtgtcctggcgtcggacacgtgtc 5407253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 368
Target Start/End: Original strand, 41961579 - 41961641
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccga 368  Q
    |||||||||| ||||||| || ||||| |||||||||  || ||||| |||||||||||||||    
T  41961579 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccga 41961641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 364
Target Start/End: Original strand, 15999951 - 16000008
Alignment:
Q  307 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgt 364  Q
    ||||| ||| |||||||||||||||| |||||||||  || ||||| |||||||||||    
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgt 16000008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 375
Target Start/End: Complemental strand, 27505370 - 27505301
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgaca 375  Q
    |||||||||| |||||||||| ||||| ||| |||||  || ||||| |||||||||||| ||| |||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacacgaca 27505301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 365
Target Start/End: Original strand, 40258874 - 40258932
Alignment:
Q  307 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtc 365  Q
    |||||||||||||||||||| ||||| |||||||||| || ||||| | ||||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtc 40258932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 341
Target Start/End: Original strand, 1704933 - 1704970
Alignment:
Q  304 atctatgaagcatggacactccttggatttggcgtgtc 341  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  1704933 atctatgaagcatggacactccttggattaggcgtgtc 1704970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 308 - 375
Target Start/End: Original strand, 1486646 - 1486713
Alignment:
Q  308 atgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgaca 375  Q
    ||||||||  ||||||||| ||||| |||||||||  || ||||| |||||||||||||||| |||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgaca 1486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 369
Target Start/End: Original strand, 22515827 - 22515890
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||||||||| |||||||||| ||||| ||||||||   || ||||||| ||||||||||||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgac 22515890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 369
Target Start/End: Complemental strand, 25934746 - 25934683
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||||||||| |||||||||||||||  ||||| ||| ||| || || ||||||||||||||||    
T  25934746 ctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgac 25934683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 369
Target Start/End: Original strand, 32461393 - 32461456
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||||||||| ||||||| |||||||| |||||||||  || || || ||||||||||||||||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgac 32461456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 369
Target Start/End: Complemental strand, 37598950 - 37598887
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||||||||| |||||||||| ||||| |||||||||   | ||||| ||||||||||||||||    
T  37598950 ctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgac 37598887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 369
Target Start/End: Complemental strand, 51410144 - 51410081
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||||||||| | | |||||||||||| ||||||||   || ||||||||||||||||||||||    
T  51410144 ctatgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgac 51410081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 369
Target Start/End: Original strand, 16297223 - 16297284
Alignment:
Q  308 atgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||||||| |||||||||| ||||| |||||||||| || ||||| ||  ||||||||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgac 16297284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 367
Target Start/End: Original strand, 10577676 - 10577736
Alignment:
Q  307 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccg 367  Q
    ||||||||| |||||||||||||||  ||||||||| ||| || || ||| ||||||||||    
T  10577676 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccg 10577736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 342
Target Start/End: Original strand, 27965940 - 27965976
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcc 342  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  27965940 ctatgaagcatggacactcctcggattaggcgtgtcc 27965976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 366
Target Start/End: Complemental strand, 40917879 - 40917819
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtcc 366  Q
    |||||||||| ||||| |||| ||||| |||||||||  || ||||| |||||||||||||    
T  40917879 ctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcc 40917819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 48415667 - 48415703
Alignment:
Q  307 tatgaagcatggacactccttggatttggcgtgtcct 343  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  48415667 tatgaagcacggacactccttggattaggcgtgtcct 48415703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 369
Target Start/End: Complemental strand, 241726 - 241661
Alignment:
Q  304 atctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||||||||||| ||||||| || ||||| |||||||||  || ||||| ||||||||||||||||    
T  241726 atctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgac 241661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000006; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 375
Target Start/End: Original strand, 17327590 - 17327659
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgaca 375  Q
    |||||||||| |||||||||| ||||| |||||||||  || || || |||||||||||||||| |||||    
T  17327590 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacacgaca 17327659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 366
Target Start/End: Complemental strand, 31385048 - 31384989
Alignment:
Q  307 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtcc 366  Q
    ||||||||| |||||||||||||||| |||||||||  || | ||| |||||||||||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtcc 31384989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 368
Target Start/End: Original strand, 8365448 - 8365510
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccga 368  Q
    |||||||||| ||| |||||| ||||| |||||||||  || ||||| |||||||||||||||    
T  8365448 ctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccga 8365510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 369
Target Start/End: Complemental strand, 34595255 - 34595190
Alignment:
Q  304 atctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||||||||||| |||||||||| ||||| || ||||||  || || || ||||||||||||||||    
T  34595255 atctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgac 34595190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 342
Target Start/End: Original strand, 5732474 - 5732510
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcc 342  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  5732474 ctatgaagcatggacactcctcggattaggcgtgtcc 5732510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 342
Target Start/End: Complemental strand, 10649407 - 10649371
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcc 342  Q
    |||||||||| |||||||||||||||| |||||||||    
T  10649407 ctatgaagcacggacactccttggattaggcgtgtcc 10649371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 369
Target Start/End: Original strand, 32978842 - 32978902
Alignment:
Q  309 tgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    ||||||| |||||||||||||||| | |||||||  || ||||| | ||||||||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgac 32978902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 377
Target Start/End: Complemental strand, 31084448 - 31084376
Alignment:
Q  305 tctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgactcgacatc 377  Q
    |||||||| || |||||||||| ||||| ||| |||||  || ||||| |||||||||||||||| |||||||    
T  31084448 tctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacacgacatc 31084376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 369
Target Start/End: Original strand, 21576685 - 21576748
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||||||||| |||||||||| ||||| |||||||||  || || || ||||||||||||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgac 21576748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 369
Target Start/End: Original strand, 28588614 - 28588677
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    ||||||||||||||||||| | |||||  ||||||||| || || |||| ||||||||||||||    
T  28588614 ctatgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgac 28588677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 369
Target Start/End: Complemental strand, 39698671 - 39698608
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||||||||| |||||||||| ||||| ||||||||   || |||||||| |||||||||||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgac 39698608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 369
Target Start/End: Complemental strand, 6401627 - 6401565
Alignment:
Q  307 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    ||||||||| |||||||||||||||  ||||| ||| ||| || || ||||||||||||||||    
T  6401627 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgac 6401565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 369
Target Start/End: Complemental strand, 21542159 - 21542097
Alignment:
Q  307 tatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    ||||| ||| ||||| |||||||||| |||||||||  || ||||| ||||||||||||||||    
T  21542159 tatgatgcacggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgac 21542097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 365
Target Start/End: Complemental strand, 42893480 - 42893420
Alignment:
Q  305 tctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtc 365  Q
    ||||||||||||||||||||||   ||| |||||||||| || ||||| |||||| |||||    
T  42893480 tctatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtc 42893420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 364
Target Start/End: Complemental strand, 8720 - 8662
Alignment:
Q  306 ctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgt 364  Q
    |||||||||| |||||||||||||||| ||||| |||  || ||||| |||||||||||    
T  8720 ctatgaagcacggacactccttggattaggcgtatcccagtgtcggacacgtgtcgtgt 8662  T

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Target: scaffold0306 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 369
Target Start/End: Complemental strand, 13523 - 13462
Alignment:
Q  308 atgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||||||| |||||||||||||||| || ||||||| || || ||  |||||||||||||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgac 13462  T

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Target: scaffold0152 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 369
Target Start/End: Original strand, 21804 - 21865
Alignment:
Q  308 atgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    |||||||| |||||||||||||||| || ||||||| || || ||  |||||||||||||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgac 21865  T

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Target: scaffold0793 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 4819 - 4879
Alignment:
Q  304 atctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgt 364  Q
    |||||||||||| |||||||||| ||||| |||||||||  || ||||| | |||||||||    
T  4819 atctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 4879  T

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Target: scaffold0361 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 369
Target Start/End: Complemental strand, 14647 - 14583
Alignment:
Q  305 tctatgaagcatggacactccttggatttggcgtgtcctcgtatcggatacgtgtcgtgtccgac 369  Q
    ||||||||||| | ||||||||| |||| ||||||||   || ||||| ||||||||||||||||    
T  14647 tctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgac 14583  T

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