View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2510_high_18 (Length: 250)
Name: NF2510_high_18
Description: NF2510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2510_high_18 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 13120598 - 13120362
Alignment:
| Q |
1 |
tagtctgaagttaacttttatctaccttataattgtttttggttagccttaatgttaccaactaagccaacattataaatatgcatgcaacggatggaat |
100 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13120598 |
tagtttgaagttaacttctatctaccttataattgtttttggttagccttaatgttaccaactaagccaacattataaatatgcatgcaacggatggaat |
13120499 |
T |
|
| Q |
101 |
ctattgctacttgttcaattaaggatatatgatttgataatttaatttaattaacttacaagtttgattcgttttgatgggtaaaagtttaggagaatat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13120498 |
ctattgctacttgttcaattaaggatatatgatttgataatttaatttaattaacttacaagtttgattcgttttgatgggtaaaagtttaggagaatat |
13120399 |
T |
|
| Q |
201 |
atccctaattatcaagtgtgcatctcacgccaagttc |
237 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13120398 |
atccctaattatcaagtgtgcatctcacgccaagttc |
13120362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University