View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2510_low_16 (Length: 316)
Name: NF2510_low_16
Description: NF2510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2510_low_16 |
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Alignment Details
Target: chr3 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 32493618 - 32493320
Alignment:
| Q |
1 |
taatttgctgctaatttttgacttgtttgcctaaaatgccttgcagcttgatcggaaaccttccaagtgtgtggttttcgaagatgatcctcgaggagta |
100 |
Q |
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| T |
32493618 |
taatttggtgctaatttttgacttgtttgcctaaaatgccttgcagcttgatcggaaaccttccaagtgtgttgttttcgaagatgatcctcgaggagta |
32493519 |
T |
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| Q |
101 |
actgccgcgcacaattgcacaatgatggctgtagcattgattggagcatatcgcgcgtgagtaattctcgttaatgcataaataaatagcacacgatgtt |
200 |
Q |
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| T |
32493518 |
actgctgcgcacaattgcacaatgatggctgtagcattgattggagcatatcgcgcgtgagtaattctcgttaatgcataaataaatagcacacgatgtt |
32493419 |
T |
|
| Q |
201 |
aatatatgaaaataaaattccatgaaacatactcaagagtacataaaattcggttgagttaataacatcaaattagttgtaatcccttgtattgaaatg |
299 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
32493418 |
aatatatgaaaataaaattccatgaaacatactcaagagtacataaaattcggttgagttaataacatcaaattagttgtattcccttgtattgaaatg |
32493320 |
T |
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