View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2512_high_47 (Length: 251)
Name: NF2512_high_47
Description: NF2512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2512_high_47 |
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Alignment Details
Target: chr8 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 39550272 - 39550443
Alignment:
| Q |
1 |
cagtggaacaaatccatccttattcgctaactctaacccaaaacggttacagttgcggtttttcgcttcgggcaaaaatggcggcaatgatggtgttgtg |
100 |
Q |
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||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
39550272 |
cagtggaacaaatccatccctattcgctaactctaaccgaaaacggttacagttgcggtttttcgcttcgggcaaaaatggcggcaatggtggtgttgta |
39550371 |
T |
|
| Q |
101 |
gatgagatatccgaaaccgtaaaggcgcacgcgaatttcgtgtggcctgacaacaaggttttgaatcgttcc |
172 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
39550372 |
gatgagatatccgaaaccgtaaaggcgcacgctaatttcgtgtggcctgacaacaaggttttgaatcgttcc |
39550443 |
T |
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