View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2512_low_42 (Length: 270)

Name: NF2512_low_42
Description: NF2512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2512_low_42
NF2512_low_42
[»] chr3 (37 HSPs)
chr3 (5-270)||(13414476-13414741)
chr3 (214-263)||(35222952-35223001)
chr3 (213-257)||(7928470-7928514)
chr3 (213-257)||(40993330-40993374)
chr3 (213-268)||(13845520-13845575)
chr3 (212-259)||(25093520-25093567)
chr3 (213-259)||(8383275-8383321)
chr3 (213-259)||(8789545-8789591)
chr3 (213-260)||(2941575-2941622)
chr3 (217-263)||(38731232-38731278)
chr3 (213-259)||(49505149-49505195)
chr3 (218-259)||(8039835-8039876)
chr3 (213-258)||(11507470-11507515)
chr3 (218-263)||(14028021-14028066)
chr3 (177-230)||(21367329-21367382)
chr3 (212-259)||(6780413-6780460)
chr3 (212-259)||(20691337-20691384)
chr3 (213-259)||(7614410-7614456)
chr3 (213-255)||(25775531-25775573)
chr3 (213-259)||(45451571-45451617)
chr3 (222-259)||(10690266-10690303)
chr3 (212-249)||(15505784-15505821)
chr3 (220-257)||(17005621-17005658)
chr3 (216-257)||(18426969-18427010)
chr3 (212-257)||(20389636-20389680)
chr3 (224-257)||(29508464-29508497)
chr3 (170-223)||(34185048-34185101)
chr3 (174-223)||(41961579-41961628)
chr3 (218-259)||(48353731-48353772)
chr3 (212-257)||(51206347-51206392)
chr3 (213-249)||(3631712-3631748)
chr3 (213-257)||(10954972-10955016)
chr3 (212-259)||(11251996-11252041)
chr3 (186-250)||(12674468-12674530)
chr3 (213-257)||(24633396-24633440)
chr3 (174-222)||(40993275-40993323)
chr3 (213-257)||(55401095-55401139)
[»] chr6 (42 HSPs)
chr6 (193-259)||(21924910-21924976)
chr6 (177-259)||(9025448-9025535)
chr6 (212-259)||(7265587-7265634)
chr6 (174-257)||(7938136-7938219)
chr6 (213-259)||(7377997-7378043)
chr6 (213-259)||(19040370-19040416)
chr6 (174-225)||(4388148-4388199)
chr6 (218-257)||(7027262-7027301)
chr6 (212-259)||(13360366-13360413)
chr6 (213-263)||(5626691-5626741)
chr6 (213-259)||(5732505-5732551)
chr6 (217-259)||(9629401-9629443)
chr6 (213-259)||(13364700-13364746)
chr6 (218-259)||(7996378-7996419)
chr6 (218-259)||(8022382-8022423)
chr6 (218-259)||(9617452-9617493)
chr6 (218-263)||(16488590-16488635)
chr6 (218-263)||(18367850-18367895)
chr6 (218-259)||(26562707-26562748)
chr6 (213-257)||(1700372-1700416)
chr6 (213-257)||(12627572-12627616)
chr6 (213-257)||(28152118-28152162)
chr6 (213-257)||(33001284-33001328)
chr6 (213-257)||(34595154-34595198)
chr6 (220-259)||(7086813-7086852)
chr6 (220-259)||(9658897-9658936)
chr6 (224-259)||(11591876-11591911)
chr6 (213-259)||(31579222-31579266)
chr6 (216-259)||(32511664-32511707)
chr6 (174-255)||(9027200-9027286)
chr6 (213-247)||(30851630-30851664)
chr6 (213-258)||(7740660-7740705)
chr6 (212-249)||(7977824-7977861)
chr6 (218-259)||(9195754-9195795)
chr6 (174-223)||(17327590-17327639)
chr6 (174-211)||(32839571-32839608)
chr6 (218-259)||(34073347-34073388)
chr6 (213-249)||(12690444-12690480)
chr6 (213-249)||(16388212-16388248)
chr6 (219-259)||(19044482-19044522)
chr6 (213-249)||(28715323-28715359)
chr6 (223-259)||(30866149-30866185)
[»] chr2 (38 HSPs)
chr2 (212-263)||(20242721-20242772)
chr2 (206-263)||(20922916-20922973)
chr2 (213-257)||(34691800-34691844)
chr2 (213-257)||(34714212-34714256)
chr2 (213-256)||(5367213-5367256)
chr2 (220-259)||(39279693-39279732)
chr2 (218-263)||(34784982-34785027)
chr2 (176-259)||(42832234-42832317)
chr2 (218-259)||(35056886-35056927)
chr2 (218-259)||(44860338-44860379)
chr2 (213-257)||(2438714-2438758)
chr2 (219-259)||(18889592-18889632)
chr2 (213-257)||(19536392-19536436)
chr2 (219-259)||(38355888-38355928)
chr2 (200-259)||(8300201-8300260)
chr2 (51-94)||(17277235-17277278)
chr2 (216-259)||(23718044-23718087)
chr2 (216-259)||(24105716-24105759)
chr2 (172-223)||(41843516-41843567)
chr2 (173-259)||(25072718-25072803)
chr2 (213-259)||(31018608-31018654)
chr2 (218-268)||(36096375-36096425)
chr2 (213-259)||(37411239-37411285)
chr2 (226-259)||(21616780-21616813)
chr2 (213-254)||(28596492-28596533)
chr2 (222-259)||(30527599-30527636)
chr2 (220-257)||(31808097-31808134)
chr2 (227-263)||(2665897-2665933)
chr2 (213-257)||(5040754-5040798)
chr2 (213-257)||(5473348-5473392)
chr2 (219-259)||(18276539-18276579)
chr2 (213-249)||(21624295-21624331)
chr2 (224-256)||(28524447-28524479)
chr2 (217-257)||(28677929-28677968)
chr2 (213-257)||(30404845-30404889)
chr2 (213-249)||(31855803-31855839)
chr2 (174-222)||(34784911-34784959)
chr2 (220-268)||(41843450-41843498)
[»] chr5 (32 HSPs)
chr5 (186-268)||(32426837-32426919)
chr5 (174-257)||(6247642-6247729)
chr5 (213-259)||(26312787-26312833)
chr5 (213-259)||(28588669-28588715)
chr5 (213-259)||(30502383-30502429)
chr5 (213-259)||(30542726-30542772)
chr5 (222-268)||(39758281-39758327)
chr5 (174-259)||(6326253-6326338)
chr5 (213-262)||(42029767-42029816)
chr5 (218-268)||(6401507-6401557)
chr5 (213-259)||(18421836-18421882)
chr5 (213-259)||(34879368-34879414)
chr5 (218-259)||(3966521-3966562)
chr5 (218-259)||(6471889-6471930)
chr5 (214-259)||(16203791-16203836)
chr5 (212-257)||(21191050-21191095)
chr5 (218-263)||(21814275-21814320)
chr5 (218-259)||(41091257-41091298)
chr5 (213-257)||(15884008-15884052)
chr5 (213-257)||(43564901-43564945)
chr5 (213-259)||(2548405-2548451)
chr5 (213-259)||(17925167-17925213)
chr5 (213-259)||(23012403-23012449)
chr5 (216-249)||(30099036-30099069)
chr5 (212-257)||(33178045-33178090)
chr5 (218-259)||(36838561-36838602)
chr5 (213-257)||(14422922-14422966)
chr5 (219-259)||(14873535-14873575)
chr5 (173-229)||(19429491-19429547)
chr5 (213-257)||(21576740-21576784)
chr5 (227-259)||(24273039-24273071)
chr5 (227-259)||(24389143-24389175)
[»] chr1 (52 HSPs)
chr1 (213-263)||(30749854-30749904)
chr1 (213-263)||(30771305-30771355)
chr1 (213-257)||(52903269-52903313)
chr1 (174-256)||(13436479-13436562)
chr1 (212-263)||(39130761-39130812)
chr1 (212-263)||(39953140-39953191)
chr1 (212-259)||(40181889-40181936)
chr1 (213-259)||(1864875-1864921)
chr1 (218-259)||(34371731-34371772)
chr1 (218-259)||(44482248-44482289)
chr1 (172-253)||(35702540-35702623)
chr1 (213-259)||(9709838-9709884)
chr1 (213-259)||(14332637-14332683)
chr1 (213-259)||(36878479-36878525)
chr1 (218-259)||(7918211-7918252)
chr1 (220-257)||(13997903-13997940)
chr1 (212-257)||(18337349-18337394)
chr1 (218-259)||(20157350-20157391)
chr1 (218-259)||(25361904-25361945)
chr1 (213-258)||(29163376-29163421)
chr1 (213-257)||(5898261-5898305)
chr1 (176-259)||(25452108-25452189)
chr1 (219-259)||(38503338-38503378)
chr1 (213-257)||(51410045-51410089)
chr1 (218-257)||(1486709-1486748)
chr1 (212-259)||(2784574-2784621)
chr1 (218-257)||(5944303-5944342)
chr1 (218-257)||(9828064-9828103)
chr1 (220-259)||(10233271-10233310)
chr1 (215-258)||(17705584-17705626)
chr1 (212-259)||(23636043-23636090)
chr1 (218-257)||(48148037-48148076)
chr1 (213-263)||(1815271-1815321)
chr1 (174-259)||(2288125-2288208)
chr1 (213-263)||(10577730-10577780)
chr1 (193-259)||(12443436-12443501)
chr1 (171-217)||(18556382-18556428)
chr1 (213-247)||(37598861-37598895)
chr1 (214-256)||(38075966-38076008)
chr1 (218-259)||(6427368-6427409)
chr1 (174-249)||(24334664-24334736)
chr1 (226-259)||(25098563-25098596)
chr1 (218-259)||(25272500-25272541)
chr1 (213-249)||(19058851-19058887)
chr1 (227-259)||(19324580-19324612)
chr1 (213-257)||(22515882-22515926)
chr1 (213-257)||(22881611-22881655)
chr1 (213-249)||(24462671-24462707)
chr1 (213-257)||(38078656-38078700)
chr1 (213-257)||(40258928-40258972)
chr1 (175-223)||(45534131-45534179)
chr1 (213-257)||(46348378-46348422)
[»] chr7 (38 HSPs)
chr7 (213-268)||(39138453-39138508)
chr7 (213-263)||(18213028-18213078)
chr7 (212-259)||(20549809-20549856)
chr7 (218-259)||(5548694-5548735)
chr7 (218-259)||(22602710-22602751)
chr7 (215-259)||(9482952-9482996)
chr7 (220-263)||(17851445-17851488)
chr7 (213-259)||(3721111-3721157)
chr7 (214-264)||(5835260-5835310)
chr7 (219-256)||(640134-640171)
chr7 (214-263)||(24146830-24146879)
chr7 (174-259)||(28155588-28155673)
chr7 (214-259)||(32287459-32287504)
chr7 (213-257)||(15680829-15680873)
chr7 (213-257)||(26733324-26733368)
chr7 (221-263)||(2948697-2948739)
chr7 (221-259)||(3520345-3520383)
chr7 (172-230)||(6490779-6490837)
chr7 (213-259)||(12278853-12278898)
chr7 (213-259)||(21880170-21880216)
chr7 (225-259)||(22868060-22868094)
chr7 (174-223)||(598278-598327)
chr7 (218-259)||(7328691-7328732)
chr7 (218-263)||(7758336-7758381)
chr7 (218-247)||(9949071-9949100)
chr7 (220-257)||(15902842-15902879)
chr7 (218-259)||(16341514-16341555)
chr7 (218-259)||(17307911-17307952)
chr7 (174-211)||(18212973-18213010)
chr7 (213-262)||(18226959-18227008)
chr7 (218-259)||(19992019-19992060)
chr7 (214-263)||(22484039-22484088)
chr7 (222-259)||(27732243-27732280)
chr7 (218-259)||(32308138-32308179)
chr7 (174-223)||(40131939-40131988)
chr7 (219-259)||(19206068-19206108)
chr7 (213-257)||(21826293-21826337)
chr7 (213-257)||(25481922-25481966)
[»] chr4 (41 HSPs)
chr4 (175-259)||(17425348-17425430)
chr4 (176-259)||(16189727-16189813)
chr4 (176-259)||(22440559-22440641)
chr4 (213-257)||(40179631-40179675)
chr4 (213-257)||(54580018-54580062)
chr4 (213-259)||(8423713-8423759)
chr4 (174-259)||(10499227-10499311)
chr4 (222-259)||(26504303-26504340)
chr4 (218-263)||(44132644-44132689)
chr4 (219-259)||(5775359-5775399)
chr4 (213-257)||(12797333-12797377)
chr4 (223-259)||(40613468-40613504)
chr4 (213-257)||(42640549-42640593)
chr4 (213-257)||(49431046-49431090)
chr4 (218-257)||(22234890-22234929)
chr4 (218-265)||(46083991-46084038)
chr4 (213-259)||(8402737-8402783)
chr4 (213-247)||(20950422-20950456)
chr4 (194-240)||(30094066-30094112)
chr4 (218-263)||(5414172-5414217)
chr4 (218-259)||(7970537-7970578)
chr4 (214-259)||(9996858-9996903)
chr4 (218-259)||(13134468-13134509)
chr4 (217-254)||(15029788-15029825)
chr4 (218-263)||(19097894-19097939)
chr4 (172-217)||(28964186-28964231)
chr4 (218-259)||(30982878-30982919)
chr4 (226-259)||(36635342-36635375)
chr4 (214-247)||(42014989-42015022)
chr4 (218-259)||(46160914-46160955)
chr4 (213-249)||(482233-482269)
chr4 (174-222)||(715545-715593)
chr4 (174-222)||(752871-752919)
chr4 (213-257)||(6879460-6879504)
chr4 (213-257)||(12895269-12895313)
chr4 (213-249)||(16073422-16073458)
chr4 (219-259)||(18576038-18576078)
chr4 (213-257)||(23292981-23293025)
chr4 (213-257)||(28964243-28964287)
chr4 (213-257)||(29205464-29205508)
chr4 (213-257)||(35157980-35158024)
[»] chr8 (31 HSPs)
chr8 (216-259)||(4786336-4786379)
chr8 (212-259)||(34897103-34897150)
chr8 (213-259)||(13844591-13844637)
chr8 (218-260)||(26902175-26902217)
chr8 (174-246)||(11833893-11833969)
chr8 (218-257)||(11927086-11927125)
chr8 (220-263)||(18964191-18964234)
chr8 (169-259)||(27213565-27213649)
chr8 (213-259)||(3025569-3025615)
chr8 (218-256)||(8847277-8847315)
chr8 (213-263)||(28747430-28747480)
chr8 (213-259)||(31236572-31236618)
chr8 (213-259)||(33405379-33405425)
chr8 (214-259)||(12606825-12606870)
chr8 (213-258)||(43737806-43737851)
chr8 (213-257)||(4948672-4948716)
chr8 (219-259)||(14134717-14134757)
chr8 (220-259)||(11803277-11803316)
chr8 (218-257)||(11944685-11944724)
chr8 (212-259)||(12985410-12985457)
chr8 (219-249)||(28384995-28385025)
chr8 (213-259)||(38079017-38079063)
chr8 (213-259)||(40332209-40332255)
chr8 (219-248)||(8293854-8293883)
chr8 (214-259)||(31109514-31109559)
chr8 (218-263)||(34451037-34451082)
chr8 (219-259)||(20679396-20679436)
chr8 (213-257)||(20873089-20873133)
chr8 (213-257)||(24613540-24613584)
chr8 (215-259)||(31580124-31580168)
chr8 (219-259)||(33382020-33382060)
[»] scaffold0623 (1 HSPs)
scaffold0623 (218-263)||(5996-6041)
[»] scaffold0123 (1 HSPs)
scaffold0123 (222-259)||(44529-44566)
[»] scaffold0116 (1 HSPs)
scaffold0116 (218-263)||(9912-9957)
[»] scaffold0036 (1 HSPs)
scaffold0036 (218-259)||(9747-9788)
[»] scaffold0020 (1 HSPs)
scaffold0020 (218-259)||(135312-135353)
[»] scaffold0050 (1 HSPs)
scaffold0050 (213-249)||(70306-70342)
[»] scaffold0171 (1 HSPs)
scaffold0171 (218-257)||(23440-23479)
[»] scaffold0022 (2 HSPs)
scaffold0022 (212-259)||(90861-90908)
scaffold0022 (218-263)||(99907-99952)
[»] scaffold0122 (1 HSPs)
scaffold0122 (175-209)||(8761-8795)
[»] scaffold0044 (1 HSPs)
scaffold0044 (221-259)||(53198-53236)
[»] scaffold0236 (1 HSPs)
scaffold0236 (218-259)||(25768-25809)
[»] scaffold0003 (1 HSPs)
scaffold0003 (174-223)||(241675-241724)
[»] scaffold0793 (1 HSPs)
scaffold0793 (174-222)||(4821-4869)
[»] scaffold0652 (1 HSPs)
scaffold0652 (213-257)||(457-501)
[»] scaffold0227 (1 HSPs)
scaffold0227 (169-217)||(15047-15095)
[»] scaffold0083 (1 HSPs)
scaffold0083 (213-249)||(45525-45561)


Alignment Details
Target: chr3 (Bit Score: 250; Significance: 1e-139; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 5 - 270
Target Start/End: Complemental strand, 13414741 - 13414476
Alignment:
Q  5 ggtagattattctgaagagcaaaatggtgaactcttttacagtgtacttggaggattaggacagtttggcattataacaagagcaagaatcttgctagag 104  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13414741 ggtaaattgttctgaagagcaaaatggtgaactcttttacagtgtacttggaggattaggacagtttggcattataacaagagcaagaatcttgctagag 13414642  T
Q  105 ccagcacctaccatggtaataattcattttataggatgttagaaacaagcaaggttctttaatattcaactatgaagcatagacacttctcggataaggc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13414641 ccagcacctaccatggtaataattcattttataggatgttagaaacaagcaaggttctttaatattcaactatgaagtatagacacttctcggataaggc 13414542  T
Q  205 gtgtccctgtgtccgacaccgacacatataattacactgaattatttgattttctaaaacatttgg 270  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13414541 gtgtccctgtgtccgacaccgacacatataattacattgaattatttgattttctaaaacatttgg 13414476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 35223001 - 35222952
Alignment:
Q  214 tgtccgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  35223001 tgtccgacaccgacacatataattacattgaattatgtgattttctaaaa 35222952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 7928514 - 7928470
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  7928514 gtgtccgacaccgacacatataattacactgaattatgtgatttt 7928470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 40993330 - 40993374
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  40993330 gtgtccgacaccgacacatataattacactgaattatgtgatttt 40993374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 13845520 - 13845575
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttctaaaacattt 268  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||||||||| ||||    
T  13845520 gtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaaattt 13845575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 25093567 - 25093520
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||    
T  25093567 tgtgtccgacaccgacacatataattacactgaattgtgtgattttct 25093520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 8383321 - 8383275
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||    
T  8383321 gtgtccgacaccgacacttataattacactgaattatatgattttct 8383275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 8789545 - 8789591
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||    
T  8789545 gtgtccgacaccgacacatataattacacggaattatgtgattttct 8789591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 2941622 - 2941575
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttcta 260  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  2941622 gtgtccgacaccgacacatataattacactgtattttgtgattttcta 2941575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 38731278 - 38731232
Alignment:
Q  217 ccgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    ||||||||||||||||||| ||||||||||||| ||||||| |||||    
T  38731278 ccgacaccgacacatataactacactgaattatgtgattttttaaaa 38731232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 49505149 - 49505195
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||| |||||||||||||||||| |||||| |||||||||    
T  49505149 gtgtccgacactgacacatataattacactaaattatgtgattttct 49505195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 8039835 - 8039876
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||||||||||| | |||||||    
T  8039835 cgacaccgacacatataattacactgaattatataattttct 8039876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 11507470 - 11507515
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttc 258  Q
    |||||||| ||||| |||||||||||||||||||||| ||||||||    
T  11507470 gtgtccgataccgaaacatataattacactgaattatgtgattttc 11507515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 14028066 - 14028021
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    |||||||||||||||||||||||||| ||| | |||||||||||||    
T  14028066 cgacaccgacacatataattacactgcattttgtgattttctaaaa 14028021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 21367382 - 21367329
Alignment:
Q  177 tgaagcatagacacttctcggataaggcgtgtccctgtgtccgacaccgacaca 230  Q
    ||||||| ||||||||||||||| ||| ||||||  ||||||||||||||||||    
T  21367382 tgaagcacagacacttctcggattaggtgtgtccaagtgtccgacaccgacaca 21367329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 6780413 - 6780460
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||| |||||||||||||||||||| ||  |||||||||    
T  6780413 tgtgtccgacaccaacacatataattacactgaactacgtgattttct 6780460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 20691384 - 20691337
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||| ||||||||||||||| ||||||||||||||| | |||||||    
T  20691384 tgtgtctgacaccgacacatatgattacactgaattatgtcattttct 20691337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 7614410 - 7614456
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||| ||||||||||| ||||||||| |||||||||| |||||||||    
T  7614410 gtgttcgacaccgacatatataattatactgaattatgtgattttct 7614456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 255
Target Start/End: Complemental strand, 25775573 - 25775531
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatt 255  Q
    ||||||||||||||||| | ||||||||||||||||| |||||    
T  25775573 gtgtccgacaccgacacttgtaattacactgaattatgtgatt 25775531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 45451617 - 45451571
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||| |||| |||||| ||| |||||||||    
T  45451617 gtgtccgacaccgacacatattattatactgaagtatgtgattttct 45451571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 10690266 - 10690303
Alignment:
Q  222 accgacacatataattacactgaattatttgattttct 259  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  10690266 accgacaaatataattacactgaattatgtgattttct 10690303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 249
Target Start/End: Original strand, 15505784 - 15505821
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattat 249  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  15505784 tgtgtccgacaccaacacttataattacactgaattat 15505821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 17005621 - 17005658
Alignment:
Q  220 acaccgacacatataattacactgaattatttgatttt 257  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  17005621 acaccgacacttataattacactgaattatatgatttt 17005658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 18427010 - 18426969
Alignment:
Q  216 tccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||| |||||||||||| ||||||| |||||||    
T  18427010 tccgacaccgacatatataattacaccgaattatgtgatttt 18426969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 20389680 - 20389636
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||    
T  20389680 tgtgtccgacaccgacgcatata-ttacactgaattatgtgatttt 20389636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 224 - 257
Target Start/End: Complemental strand, 29508497 - 29508464
Alignment:
Q  224 cgacacatataattacactgaattatttgatttt 257  Q
    |||||||||||||||||||||||||| |||||||    
T  29508497 cgacacatataattacactgaattatatgatttt 29508464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 34185048 - 34185101
Alignment:
Q  170 tcaactatgaagcatagacacttctcggataaggcgtgtccctgtgtccgacac 223  Q
    ||||||||||||||  |||||| ||||||| ||||||||||| ||||| |||||    
T  34185048 tcaactatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 34185101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 41961579 - 41961628
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccctgtgtccgacac 223  Q
    ||||||||||  |||||||||||||| ||||||||||| ||||| |||||    
T  41961579 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacac 41961628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 48353731 - 48353772
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||| ||||||||||||| | ||||||||||||||||    
T  48353731 cgacaccgatacatataattacaattaattatttgattttct 48353772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 51206347 - 51206392
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    |||||||||||||||||| | || |||||||||||||| |||||||    
T  51206347 tgtgtccgacaccgacacttgtatttacactgaattatgtgatttt 51206392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 3631748 - 3631712
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattat 249  Q
    ||||||||||| | |||||||||||||||||||||||    
T  3631748 gtgtccgacactggcacatataattacactgaattat 3631712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 10955016 - 10954972
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | | ||||||||||||||| |||||||    
T  10955016 gtgtccgacaccgacacttgtgattacactgaattatgtgatttt 10954972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 11252041 - 11251996
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||| ||||||||||||||  ||||||||||||||| |||||||||    
T  11252041 tgtgtctgacaccgacacata--attacactgaattatgtgattttct 11251996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 12674468 - 12674530
Alignment:
Q  186 gacacttctcggataaggcgtgtccctgtgtccgacaccgacacatataattacactgaattatt 250  Q
    |||||| |||||||| ||||||||| ||| |||||||| |||||||  |||||||||||||||||    
T  12674468 gacactcctcggata-ggcgtgtccatgtatccgacac-gacacatgcaattacactgaattatt 12674530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 24633396 - 24633440
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    |||||| ||||||||||||||||||||| |||||||  |||||||    
T  24633396 gtgtccaacaccgacacatataattacattgaattacgtgatttt 24633440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 40993275 - 40993323
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccctgtgtccgaca 222  Q
    ||||||||||| |||||| ||||||| ||||||||||| ||||| ||||    
T  40993275 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggaca 40993323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 55401139 - 55401095
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | |||||||||| |||||| |||||||    
T  55401139 gtgtccgacaccgacacttgtaattacactaaattatgtgatttt 55401095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 21924910 - 21924976
Alignment:
Q  193 ctcggataaggcgtgtccctgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  21924910 ctcggattaggcgtgtcccggtgtccgacaccgacacatataattacactgaattatttgatattct 21924976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 259
Target Start/End: Original strand, 9025448 - 9025535
Alignment:
Q  177 tgaagcatagacacttctcggataaggcgtgtccctgtgtc-----cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||  |||||||||||||| ||||||||||| |||||     |||||||||||||||||||||||||||||||| |||||||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgacaccgacacatataattacactgaattatgtgattttct 9025535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 7265587 - 7265634
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  7265587 tgtgtccgacaccgacacatataattacactgaattatgtgattttct 7265634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 7938219 - 7938136
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccctgtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||  |||||| ||||||| ||||||||| | ||||| ||||||||||| |||||||||||| |||||| |||||||    
T  7938219 ctatgaagcacggacactcctcggatcaggcgtgtctcggtgtcggacaccgacacttataattacactaaattatatgatttt 7938136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 7378043 - 7377997
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||    
T  7378043 gtgtccgacaccgacacatataattacattgaattatgtgattttct 7377997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 19040416 - 19040370
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||    
T  19040416 gtgtccgacacagacacatataattacactgaattatgtgattttct 19040370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 4388199 - 4388148
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccctgtgtccgacaccg 225  Q
    |||||||||| ||||||||||||||||||||||||||  ||||| |||||||    
T  4388199 ctatgaagcacagacacttctcggataaggcgtgtcctcgtgtcagacaccg 4388148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 257
Target Start/End: Complemental strand, 7027301 - 7027262
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgatttt 257  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgatttt 7027262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 13360366 - 13360413
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||| |||||||| |||||||||||||||||||||| |||||||||    
T  13360366 tgtgtctgacaccgaaacatataattacactgaattatgtgattttct 13360413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 5626691 - 5626741
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    |||||||||||||||||||||| |||||||||| ||  |||||||||||||    
T  5626691 gtgtccgacaccgacacatatatttacactgaactaagtgattttctaaaa 5626741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 5732505 - 5732551
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||||||||| || ||| |||||||||    
T  5732505 gtgtccgacaccgacacatataattacactaaaatatgtgattttct 5732551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 9629443 - 9629401
Alignment:
Q  217 ccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||| |||||||| |||||||||    
T  9629443 ccgacaccgacacatataattacattgaattatgtgattttct 9629401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 13364700 - 13364746
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||| |||||||||||||| ||||||||||||||| |||||||||    
T  13364700 gtgtccaacaccgacacatatgattacactgaattatatgattttct 13364746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 7996378 - 7996419
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||| ||||||||||||||||||||| |||||||||    
T  7996378 cgacaccgacgcatataattacactgaattatatgattttct 7996419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 8022423 - 8022382
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||| ||||||||||||||||||||| |||||||||    
T  8022423 cgacaccgacgcatataattacactgaattatatgattttct 8022382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 9617493 - 9617452
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||||| |||||||| |||||||||    
T  9617493 cgacaccgacacatataattacattgaattatgtgattttct 9617452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 16488590 - 16488635
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    |||||||||||||||||||||||||| ||| | |||||||||||||    
T  16488590 cgacaccgacacatataattacactgcattttgtgattttctaaaa 16488635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 18367895 - 18367850
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    |||||||||||||||||||||||||| ||| | |||||||||||||    
T  18367895 cgacaccgacacatataattacactgcattttgtgattttctaaaa 18367850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 26562748 - 26562707
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  26562748 cgacatcgacacatataattacactgaattatgtgattttct 26562707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 1700416 - 1700372
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||||    
T  1700416 gtgtccgacaccgacacttataattacactgaaatatgtgatttt 1700372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 12627572 - 12627616
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    |||||||||| |||||||||| ||||||||||||||| |||||||    
T  12627572 gtgtccgacatcgacacatattattacactgaattatgtgatttt 12627616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 28152162 - 28152118
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | ||||||||||||||||| |||||||    
T  28152162 gtgtccgacaccgacacttgtaattacactgaattatgtgatttt 28152118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 33001284 - 33001328
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    |||||||||||||||||||||||||||| | |||||| |||||||    
T  33001284 gtgtccgacaccgacacatataattacatttaattatgtgatttt 33001328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 34595198 - 34595154
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | ||||||||||||||||| |||||||    
T  34595198 gtgtccgacaccgacacttgtaattacactgaattatgtgatttt 34595154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 7086852 - 7086813
Alignment:
Q  220 acaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||||| |||||| |||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttct 7086813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 9658936 - 9658897
Alignment:
Q  220 acaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  9658936 acaccgacaaatataattacactgaattatgtgattttct 9658897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 11591876 - 11591911
Alignment:
Q  224 cgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||||| |||||||||    
T  11591876 cgacacatataattacactgaattatgtgattttct 11591911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 31579222 - 31579266
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||    
T  31579222 gtgtccgacaccgacacata--attacactgaattatgtgattttct 31579266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 259
Target Start/End: Original strand, 32511664 - 32511707
Alignment:
Q  216 tccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||| |||| ||||||||||||||||||| |||||||||    
T  32511664 tccgacaccaacacttataattacactgaattatgtgattttct 32511707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 9027286 - 9027200
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccctgtgtc-----cgacaccgacacatataattacactgaattatttgatt 255  Q
    |||||||||| | ||||| || |||| || |||||||| |||||     |||||||||||||||||||||||| ||||||| |||||    
T  9027286 ctatgaagcacaaacactccttggattagccgtgtcccggtgtcggacacgacaccgacacatataattacacggaattatgtgatt 9027200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 247
Target Start/End: Complemental strand, 30851664 - 30851630
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaatt 247  Q
    |||||||||||||||||||||||||||| ||||||    
T  30851664 gtgtccgacaccgacacatataattacattgaatt 30851630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 7740705 - 7740660
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttc 258  Q
    ||||||||||| |||||||||||||||||| |||| | ||||||||    
T  7740705 gtgtccgacactgacacatataattacactcaattttgtgattttc 7740660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 249
Target Start/End: Original strand, 7977824 - 7977861
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattat 249  Q
    |||||||||||||||||| | |||||||||||||||||    
T  7977824 tgtgtccgacaccgacacttgtaattacactgaattat 7977861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 9195754 - 9195795
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||||||| |||||| | |||||||    
T  9195754 cgacaccgacacatataattacactaaattatgtcattttct 9195795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 17327590 - 17327639
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccctgtgtccgacac 223  Q
    ||||||||||  |||||| ||||||| ||||||||||||||||| |||||    
T  17327590 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacac 17327639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 32839571 - 32839608
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccc 211  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  32839571 ctatgaagcacagacacttctcggattaggcgtgtccc 32839608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 34073347 - 34073388
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||| |||||||||||||||||||||  ||||||||    
T  34073347 cgacaccgacccatataattacactgaattatgagattttct 34073388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 12690480 - 12690444
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattat 249  Q
    |||||||||| ||||||||||||||||| ||||||||    
T  12690480 gtgtccgacatcgacacatataattacattgaattat 12690444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 16388212 - 16388248
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattat 249  Q
    ||||||||||||||||| | |||||||||||||||||    
T  16388212 gtgtccgacaccgacacttgtaattacactgaattat 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 19044522 - 19044482
Alignment:
Q  219 gacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||| |||||||||||| |||| ||||    
T  19044522 gacaccgacacatataataacactgaattatgtgatattct 19044482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 28715359 - 28715323
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattat 249  Q
    ||||||||||||||||| | |||||||||||||||||    
T  28715359 gtgtccgacaccgacacttgtaattacactgaattat 28715323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 30866149 - 30866185
Alignment:
Q  223 ccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||| |||||||| |||||||||    
T  30866149 ccgacacatataattacattgaattatgtgattttct 30866185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 20242721 - 20242772
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20242721 tgtgtccgacaccgacacatataattacactgaattatgtgattttctaaaa 20242772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 20922916 - 20922973
Alignment:
Q  206 tgtccctgtgtccgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    |||||| ||||||||||| |||||||||||||||||| |||||| |||||||||||||    
T  20922916 tgtccccgtgtccgacacagacacatataattacactaaattatgtgattttctaaaa 20922973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 34691800 - 34691844
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  34691800 gtgtccgacaccgacacatataattacactgaattatatgatttt 34691844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 34714212 - 34714256
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  34714212 gtgtccgacaccgacacatataattacactgaattatatgatttt 34714256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 5367256 - 5367213
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattt 256  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  5367256 gtgtccgacaccgacacatataattacactgaattatgtgattt 5367213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 39279732 - 39279693
Alignment:
Q  220 acaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  39279732 acaccgacacatataattacactgaattatttgattttct 39279693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 34784982 - 34785027
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||    
T  34784982 cgacaccgacacatataattacactaaattatgtgattttctaaaa 34785027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 42832234 - 42832317
Alignment:
Q  176 atgaagcatagacacttctcggataaggcgtgtccctgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||  |||||| || |||| ||||||||||| | ||| ||||||||||| ||||||||||||||| ||| | |||||||    
T  42832234 atgaagcaaggacactccttggattaggcgtgtcccggagtcggacaccgacacttataattacactgaaatatgtaattttct 42832317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 35056927 - 35056886
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||||||||||| || ||||||    
T  35056927 cgacaccgacacatataattacactgaattatatggttttct 35056886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 44860379 - 44860338
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  44860379 cgacaccgacacatataattacactgaattatgcgattttct 44860338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 2438714 - 2438758
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | ||||||||||||||||| |||||||    
T  2438714 gtgtccgacaccgacacttgtaattacactgaattatgtgatttt 2438758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 18889592 - 18889632
Alignment:
Q  219 gacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgattttct 18889632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 19536392 - 19536436
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | ||||||||||||||||| |||||||    
T  19536392 gtgtccgacaccgacacttgtaattacactgaattatgtgatttt 19536436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 38355888 - 38355928
Alignment:
Q  219 gacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  38355888 gacaccgacacatataatcacactgaattatgtgattttct 38355928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 259
Target Start/End: Original strand, 8300201 - 8300260
Alignment:
Q  200 aaggcgtgtccctgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||| |||||| |||||||||| ||| |||||||| |||||| | |||||||    
T  8300201 aaggcgtgtcccggtgtccaacaccgacacttatgattacactaaattatgtcattttct 8300260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 94
Target Start/End: Original strand, 17277235 - 17277278
Alignment:
Q  51 cttggaggattaggacagtttggcattataacaagagcaagaat 94  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||||    
T  17277235 cttggaggattaggacaatttggaattataacaagggcaagaat 17277278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 23718087 - 23718044
Alignment:
Q  216 tccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||    
T  23718087 tccgtcaccgacacatataattacactgaattatgtgactttct 23718044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 24105759 - 24105716
Alignment:
Q  216 tccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||    
T  24105759 tccgtcaccgacacatataattacactgaattatgtgactttct 24105716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 41843567 - 41843516
Alignment:
Q  172 aactatgaagcatagacacttctcggataaggcgtgtccctgtgtccgacac 223  Q
    |||||||||||| ||||||| ||||||||| ||||||||| ||||| |||||    
T  41843567 aactatgaagcacagacactcctcggataaagcgtgtccccgtgtcggacac 41843516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 259
Target Start/End: Complemental strand, 25072803 - 25072718
Alignment:
Q  173 actatgaagcatagacacttctcggataaggcgtgtccctgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||| ||||||||| || || ||| ||||||| || ||||||||  |||| ||| |||| | ||||||||||||||||||    
T  25072803 actatgaagcacagacacttcacgcattaggtgtgtccc-gtatccgacactaacacctattattagattgaattatttgattttct 25072718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 31018654 - 31018608
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||| |||||||||||| ||| || |||||||||    
T  31018654 gtgtccgacaccgacacctataattacactaaatcatgtgattttct 31018608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 36096375 - 36096425
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttctaaaacattt 268  Q
    ||||||||||| |||||||||||||| ||| | ||||||||||||| ||||    
T  36096375 cgacaccgacaaatataattacactgcattttgtgattttctaaaaaattt 36096425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 37411239 - 37411285
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||| ||||| ||||||||||||| |||||||||||| |||||||||    
T  37411239 gtgttcgacatcgacacatataatcacactgaattatgtgattttct 37411285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 21616813 - 21616780
Alignment:
Q  226 acacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||| |||||||||    
T  21616813 acacatataattacactgaattatgtgattttct 21616780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 28596533 - 28596492
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgat 254  Q
    ||||||||||||||||| |||||||||||||| |||| ||||    
T  28596533 gtgtccgacaccgacacttataattacactgacttatgtgat 28596492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 30527599 - 30527636
Alignment:
Q  222 accgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  30527599 accgacacatataattacactaaattatatgattttct 30527636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 31808134 - 31808097
Alignment:
Q  220 acaccgacacatataattacactgaattatttgatttt 257  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  31808134 acactgacacatataattacactgaattatgtgatttt 31808097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 263
Target Start/End: Original strand, 2665897 - 2665933
Alignment:
Q  227 cacatataattacactgaattatttgattttctaaaa 263  Q
    |||||||||||||||| |||||| |||||||||||||    
T  2665897 cacatataattacactaaattatgtgattttctaaaa 2665933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 5040798 - 5040754
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | |||||||| |||||||| |||||||    
T  5040798 gtgtccgacaccgacacttgtaattacattgaattatgtgatttt 5040754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 5473392 - 5473348
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||||||  ||||||| ||||||| |||||||    
T  5473392 gtgtccgacaccgacacataatattacaccgaattatgtgatttt 5473348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 18276579 - 18276539
Alignment:
Q  219 gacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||| |||||||||||||||||  |||||||||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttct 18276539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 21624331 - 21624295
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattat 249  Q
    ||||||||||||||||| | |||||||||||||||||    
T  21624331 gtgtccgacaccgacacttgtaattacactgaattat 21624295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 256
Target Start/End: Complemental strand, 28524479 - 28524447
Alignment:
Q  224 cgacacatataattacactgaattatttgattt 256  Q
    |||||||||||||||||||||||||| ||||||    
T  28524479 cgacacatataattacactgaattatgtgattt 28524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 28677968 - 28677929
Alignment:
Q  217 ccgacaccgacacatataattacactgaattatttgatttt 257  Q
    |||||||||| |||||||||||||||||||||| |||||||    
T  28677968 ccgacaccga-acatataattacactgaattatgtgatttt 28677929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 30404845 - 30404889
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||| ||||||| | ||||||||||||||||| |||||||    
T  30404845 gtgtccgacgccgacacttgtaattacactgaattatgtgatttt 30404889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 31855803 - 31855839
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattat 249  Q
    |||| |||||||||||||| |||||||||||||||||    
T  31855803 gtgttcgacaccgacacatctaattacactgaattat 31855839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 34784911 - 34784959
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccctgtgtccgaca 222  Q
    |||||||||| ||||||| |||| |||||||||||||| ||||| ||||    
T  34784911 ctatgaagcacagacactcctcgaataaggcgtgtccccgtgtcagaca 34784959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 41843498 - 41843450
Alignment:
Q  220 acaccgacacatataattacactgaattatttgattttctaaaacattt 268  Q
    ||||||||||||||||||| || ||||||| |||||| |||||| ||||    
T  41843498 acaccgacacatataattataccgaattatgtgatttcctaaaaaattt 41843450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 7e-18; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 186 - 268
Target Start/End: Original strand, 32426837 - 32426919
Alignment:
Q  186 gacacttctcggataaggcgtgtccctgtgtccgacaccgacacatataattacactgaattatttgattttctaaaacattt 268  Q
    |||||| |||||||||||||| |||| ||||  |||||||||||| ||||||||| |||||||| ||||||||||||| ||||    
T  32426837 gacactcctcggataaggcgtatccccgtgttagacaccgacacaaataattacaatgaattatgtgattttctaaaaaattt 32426919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 6247729 - 6247642
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccct----gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    |||||||||| ||||||||||||||| ||| |||||||     ||||||||||||||||| | ||||||||||||||||| |||||||    
T  6247729 ctatgaagcacagacacttctcggattaggtgtgtcccgtgccgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 6247642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 26312833 - 26312787
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||    
T  26312833 gtgtccgacaccgatacatataattacactgaattaattgattttct 26312787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 28588669 - 28588715
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||    
T  28588669 gtgtccgacaccgacacctataattacactgaattatgtgattttct 28588715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 30502383 - 30502429
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||    
T  30502383 gtgtccgacaccgacacatataattacactgaattaagtgattttct 30502429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 30542726 - 30542772
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||    
T  30542726 gtgtccgacaccgacacatataattacactgaattaagtgattttct 30542772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 268
Target Start/End: Complemental strand, 39758327 - 39758281
Alignment:
Q  222 accgacacatataattacactgaattatttgattttctaaaacattt 268  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||    
T  39758327 accgacacatataattacactgaattatgtgattttctaaaaaattt 39758281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 6326253 - 6326338
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccctgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||  ||||||||||| || |||||||| || ||||||||| | ||||| | ||||||||||||||||| | |||||||    
T  6326253 ctatgaagcacggacacttctcgaattaggcgtgttccggtgtccgacgctgacacttgtaattacactgaattatgtaattttct 6326338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 42029816 - 42029767
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttctaaa 262  Q
    |||||||||||||| ||||||||||||| |||||||| ||||||||||||    
T  42029816 gtgtccgacaccgatacatataattacattgaattatgtgattttctaaa 42029767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 6401557 - 6401507
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttctaaaacattt 268  Q
    |||||||||||||||||||||||||| ||| | ||||||||||||| ||||    
T  6401557 cgacaccgacacatataattacactgtattttgtgattttctaaaaaattt 6401507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 18421836 - 18421882
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||| ||||||||||||||||||||| ||||| |||||||||    
T  18421836 gtgtccgacgccgacacatataattacactggattatgtgattttct 18421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 34879414 - 34879368
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||| |||||||||| ||||||||||||||| |||||||||    
T  34879414 gtgtccgacatcgacacatattattacactgaattatatgattttct 34879368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 3966562 - 3966521
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  3966562 cgacaccgacacatataattacactgaattgtgtgattttct 3966521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 6471889 - 6471930
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||| |||||||||||||||||||||||| |||||||||    
T  6471889 cgacacccacacatataattacactgaattatgtgattttct 6471930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 16203791 - 16203836
Alignment:
Q  214 tgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||||||||||| ||||||  ||||||||    
T  16203791 tgtccgacaccgacacatataattacactaaattatgagattttct 16203836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 21191050 - 21191095
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||    
T  21191050 tgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 21191095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 21814320 - 21814275
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    |||||||||||||||||||||||||| ||| | |||||||||||||    
T  21814320 cgacaccgacacatataattacactgcattttgtgattttctaaaa 21814275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 41091257 - 41091298
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  41091257 cgacatcgacacatataattacactgaattatgtgattttct 41091298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 15884052 - 15884008
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | ||||||||||||||||| |||||||    
T  15884052 gtgtccgacaccgacacttgtaattacactgaattatgtgatttt 15884008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 43564945 - 43564901
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| |||||||||||| |||||| |||||||    
T  43564945 gtgtccgacaccgacacttataattacactaaattatgtgatttt 43564901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 2548451 - 2548405
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||| ||| ||||||||||||||| | |||||||    
T  2548451 gtgtccgacaccgacacttatgattacactgaattatgtaattttct 2548405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 17925167 - 17925213
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||| |||||||||||||||| |||||| |||||||| |||||||||    
T  17925167 gtgttcgacaccgacacatattattacattgaattatgtgattttct 17925213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 23012403 - 23012449
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||| ||||||||||||||||||||| | |||||| |||||||||    
T  23012403 gtgtccaacaccgacacatataattacattaaattatatgattttct 23012449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 249
Target Start/End: Original strand, 30099036 - 30099069
Alignment:
Q  216 tccgacaccgacacatataattacactgaattat 249  Q
    |||||||||||||||||||||||||| |||||||    
T  30099036 tccgacaccgacacatataattacacagaattat 30099069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 33178090 - 33178045
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    |||||||||||||||||| | |||||||||| |||||| |||||||    
T  33178090 tgtgtccgacaccgacacttgtaattacactaaattatgtgatttt 33178045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 36838602 - 36838561
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||||||| |||||| | |||||||    
T  36838602 cgacaccgacacatataattacactaaattatgtaattttct 36838561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 14422966 - 14422922
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    |||||||||| ||| || ||||||||||||||||||| |||||||    
T  14422966 gtgtccgacatcgaaacttataattacactgaattatgtgatttt 14422922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 14873575 - 14873535
Alignment:
Q  219 gacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||| |||||| || ||||||    
T  14873575 gacaccgacacatataattacactaaattatgtgcttttct 14873535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 19429547 - 19429491
Alignment:
Q  173 actatgaagcatagacacttctcggataaggcgtgtccctgtgtccgacaccgacac 229  Q
    ||||||||||| |||||||||| |||| || |||| ||| ||||| |||||||||||    
T  19429547 actatgaagcacagacacttcttggattagacgtgacccggtgtcagacaccgacac 19429491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 21576740 - 21576784
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    |||||||||| |||||| | ||||||||||||||||| |||||||    
T  21576740 gtgtccgacatcgacacttgtaattacactgaattatgtgatttt 21576784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 24273039 - 24273071
Alignment:
Q  227 cacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||||| |||||||||    
T  24273039 cacatataattacactgaattatgtgattttct 24273071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 24389175 - 24389143
Alignment:
Q  227 cacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||||| |||||||||    
T  24389175 cacatataattacactgaattatgtgattttct 24389143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 7e-18; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 30749904 - 30749854
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30749904 gtgtccgacaccgacacatataattacactgaattatgtgattttctaaaa 30749854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 30771355 - 30771305
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30771355 gtgtccgacaccgacacatataattacactgaattatgtgattttctaaaa 30771305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 52903313 - 52903269
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  52903313 gtgtccgacaccgacacatataattacactgaattatatgatttt 52903269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 13436562 - 13436479
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccct-gtgtccgacaccgacacatataattacactgaattatttgattt 256  Q
    ||||||||||  |||||||||||||| || ||||| |   |||||||||||| |||||||||||||||||||||||| ||||||    
T  13436562 ctatgaagcacggacacttctcggattagtcgtgttctacgtgtccgacaccaacacatataattacactgaattatgtgattt 13436479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 39130761 - 39130812
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||||    
T  39130761 tgtgtccgacaccgacacatataattacactaaattatataattttctaaaa 39130812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 39953140 - 39953191
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    ||||||||||||||||||||| ||||||||| |||||| |||||||||||||    
T  39953140 tgtgtccgacaccgacacatacaattacactaaattatgtgattttctaaaa 39953191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 40181936 - 40181889
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||    
T  40181936 tgtgtccgacaccgatacatataattacactgaattatgtgattttct 40181889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 1864875 - 1864921
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||    
T  1864875 gtgtccaacaccgacacatataattacactgaattatgtgattttct 1864921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 34371772 - 34371731
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  34371772 cgacaccgacacatataattacactgaattatgtgattttct 34371731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 44482289 - 44482248
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  44482289 cgacaccgacacatataattacactgaattatgtgattttct 44482248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 253
Target Start/End: Original strand, 35702540 - 35702623
Alignment:
Q  172 aactatgaagcatagacacttctcggataaggcgtgtccct--gtgtccgacaccgacacatataattacactgaattatttga 253  Q
    ||||||||||||  |||||| ||||||| |||||||||||   ||||||||||| ||||| | |||||||||| ||||||||||    
T  35702540 aactatgaagcacggacactcctcggattaggcgtgtcccatcgtgtccgacactgacacttgtaattacacttaattatttga 35702623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 9709884 - 9709838
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||    
T  9709884 gtgtccgacaccgacacatataattacaacgaattatgtgattttct 9709838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 14332637 - 14332683
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||| ||||||||||||||| |||||| |||||||||    
T  14332637 gtgtccgacaccgagacatataattacactaaattatgtgattttct 14332683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 36878525 - 36878479
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||| ||||||||||| ||||||||||||||||||| |||||||||    
T  36878525 gtgtcagacaccgacacctataattacactgaattatgtgattttct 36878479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 7918211 - 7918252
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||| ||||||||||||||||||||||||| |||||||||    
T  7918211 cgacactgacacatataattacactgaattatgtgattttct 7918252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 13997940 - 13997903
Alignment:
Q  220 acaccgacacatataattacactgaattatttgatttt 257  Q
    |||||||||||||||||||||||||||||| |||||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttt 13997903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 18337394 - 18337349
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||    
T  18337394 tgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 18337349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 20157350 - 20157391
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  20157350 cgacaccgacacatatgattacactgaattatgtgattttct 20157391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 25361945 - 25361904
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||| ||||||||||||||||||||||||| |||||||||    
T  25361945 cgacactgacacatataattacactgaattatgtgattttct 25361904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 29163376 - 29163421
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttc 258  Q
    |||||||||||||||||||||||||| | |||||||| ||||||||    
T  29163376 gtgtccgacaccgacacatataattaaattgaattatgtgattttc 29163421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 5898261 - 5898305
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||    
T  5898261 gtgtctgacaccgacgcatataattacactgaattatgtgatttt 5898305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 25452108 - 25452189
Alignment:
Q  176 atgaagcatagacacttctcggataaggcgtgtccctgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||  |||||| |||| || |||||||| || ||||| |||||||||||  ||||||||||||||||||  ||||||||    
T  25452108 atgaagcacggacactgctcgaattaggcgtgttccggtgtctgacaccgacac--ataattacactgaattatgagattttct 25452189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 38503378 - 38503338
Alignment:
Q  219 gacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||||||||| ||| |||||||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttct 38503338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 51410089 - 51410045
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | ||||||||||||||||| |||||||    
T  51410089 gtgtccgacaccgacacttgtaattacactgaattatgtgatttt 51410045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 257
Target Start/End: Original strand, 1486709 - 1486748
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgatttt 257  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  1486709 cgacaccgacacttataattacactgaattatgtgatttt 1486748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 2784621 - 2784574
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||| |||||||||||||||||||| ||| |||||| |||||||||    
T  2784621 tgtgtctgacaccgacacatataattatactcaattatgtgattttct 2784574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 257
Target Start/End: Complemental strand, 5944342 - 5944303
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgatttt 257  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  5944342 cgacaccgacacttataattacactgaattatgtgatttt 5944303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 257
Target Start/End: Complemental strand, 9828103 - 9828064
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  9828103 cgacaccgacacataaaattacactgaattatgtgatttt 9828064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 10233310 - 10233271
Alignment:
Q  220 acaccgacacatataattacactgaattatttgattttct 259  Q
    |||| ||||||||||||||||||||||||| |||||||||    
T  10233310 acacagacacatataattacactgaattatgtgattttct 10233271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 258
Target Start/End: Original strand, 17705584 - 17705626
Alignment:
Q  215 gtccgacaccgacacatataattacactgaattatttgattttc 258  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||    
T  17705584 gtccgacac-gacacatataattacactgaattatgtgattttc 17705626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 23636043 - 23636090
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||| |||||||||||||| |||||||||||||||| | |||||||    
T  23636043 tgtgtctgacaccgacacatacaattacactgaattatgtaattttct 23636090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 257
Target Start/End: Original strand, 48148037 - 48148076
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  48148037 cgacaccgacatatataattacactgaattatatgatttt 48148076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 1815321 - 1815271
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    ||||| ||||||||||| | ||||||||||||||||| ||||||| |||||    
T  1815321 gtgtcggacaccgacacttgtaattacactgaattatgtgattttttaaaa 1815271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 2288125 - 2288208
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccctgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||  |||| | ||||||| |||||||  |  |||||||||||||||||  ||||||||| |||||||| |||||||||    
T  2288125 ctatgaagcactgacattcctcggattaggcgtgctcaggtgtccgacaccgacac--ataattacattgaattatgtgattttct 2288208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 10577730 - 10577780
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    ||||||| | ||||||||||||||||||||| ||| | |||||||||||||    
T  10577730 gtgtccgcccccgacacatataattacactgcattttgtgattttctaaaa 10577780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 12443436 - 12443501
Alignment:
Q  193 ctcggataaggcgtgtccctgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||| ||| ||||| | ||||||||||| | |||||| |||||||||||||||| |||||||||    
T  12443436 ctcggattaggtgtgtctcggtgtccgacac-gtcacatacaattacactgaattatgtgattttct 12443501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 18556382 - 18556428
Alignment:
Q  171 caactatgaagcatagacacttctcggataaggcgtgtccctgtgtc 217  Q
    |||||||||||||  |||||||||||||| ||||||||||| |||||    
T  18556382 caactatgaagcacggacacttctcggattaggcgtgtcccagtgtc 18556428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 247
Target Start/End: Complemental strand, 37598895 - 37598861
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaatt 247  Q
    ||||||||||||||||| |||||||||||||||||    
T  37598895 gtgtccgacaccgacacttataattacactgaatt 37598861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 256
Target Start/End: Original strand, 38075966 - 38076008
Alignment:
Q  214 tgtccgacaccgacacatataattacactgaattatttgattt 256  Q
    |||||||||||||||||||| |||||||||| |||| ||||||    
T  38075966 tgtccgacaccgacacatatgattacactgacttatgtgattt 38076008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 6427409 - 6427368
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||| ||||||||||||||| |||||||| |||||||||    
T  6427409 cgacaccaacacatataattacattgaattatgtgattttct 6427368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 24334664 - 24334736
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccctgtgtccgacaccgacacatataattacactgaattat 249  Q
    ||||||||||  |||||| || |||| ||||||| |   ||||||||||||||||| | |||||||||||||||||    
T  24334664 ctatgaagcacggacactacttggattaggcgtgac---gtgtccgacaccgacacttgtaattacactgaattat 24334736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 25098563 - 25098596
Alignment:
Q  226 acacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||| |||||||||    
T  25098563 acacatataattacactgaattatgtgattttct 25098596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 25272541 - 25272500
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||| |||||||||||| |||||| |||||||||    
T  25272541 cgacaccgacacttataattacactaaattatgtgattttct 25272500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 19058851 - 19058887
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattat 249  Q
    ||||||||||||||||| | |||||||||||||||||    
T  19058851 gtgtccgacaccgacacttgtaattacactgaattat 19058887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 19324612 - 19324580
Alignment:
Q  227 cacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||||| |||||||||    
T  19324612 cacatataattacactgaattatgtgattttct 19324580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 22515882 - 22515926
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | |||||||||| |||||| |||||||    
T  22515882 gtgtccgacaccgacacttgtaattacactaaattatgtgatttt 22515926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 22881611 - 22881655
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | |||||||||| |||||| |||||||    
T  22881611 gtgtccgacaccgacacttgtaattacactaaattatgtgatttt 22881655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 24462671 - 24462707
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattat 249  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  24462671 gtgtccaacaccgacagatataattacactgaattat 24462707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 38078656 - 38078700
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | |||||||| |||||||| |||||||    
T  38078656 gtgtccgacaccgacacttgtaattacattgaattatgtgatttt 38078700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 40258928 - 40258972
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||| ||||||||||| | ||||||||||||||||| |||||||    
T  40258928 gtgtctgacaccgacacttgtaattacactgaattatgtgatttt 40258972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 45534131 - 45534179
Alignment:
Q  175 tatgaagcatagacacttctcggataaggcgtgtccctgtgtccgacac 223  Q
    ||||||||| | ||||| |||||||||||||||||||| |||| |||||    
T  45534131 tatgaagcacaaacactcctcggataaggcgtgtccctatgtcagacac 45534179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 46348378 - 46348422
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | |||||||||| |||||| |||||||    
T  46348378 gtgtccgacaccgacacttgtaattacactaaattatatgatttt 46348422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 39138508 - 39138453
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttctaaaacattt 268  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||    
T  39138508 gtgtccgacaccgacatatataattacactgaattatgtgattttctaaaaaattt 39138453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 18213028 - 18213078
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  18213028 gtgtccgacaccgacacatataattacactaaattatgtgattttctaaaa 18213078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 20549856 - 20549809
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||    
T  20549856 tgtgtccgacaccgacacatataattacactgaattacgtgattttct 20549809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 5548735 - 5548694
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  5548735 cgacactgacacatataattacactgaattatttgattttct 5548694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 22602710 - 22602751
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  22602710 cgacaccgacacatataattacactgaattatgtgattttct 22602751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 9482996 - 9482952
Alignment:
Q  215 gtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||||||||||||||| | |||||||||    
T  9482996 gtccgacaccgacacatataattacactgaattgtgtgattttct 9482952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 17851488 - 17851445
Alignment:
Q  220 acaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    |||| ||||||||||||||||||||||||| |||||||||||||    
T  17851488 acacagacacatataattacactgaattatgtgattttctaaaa 17851445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 3721157 - 3721111
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||||| ||| |||||| |||||||||    
T  3721157 gtgtccgacaccgacacatataattatactaaattatgtgattttct 3721111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 5835310 - 5835260
Alignment:
Q  214 tgtccgacaccgacacatataattacactgaattatttgattttctaaaac 264  Q
    |||| ||||||||||||||||||||||||||||||| | ||||||| ||||    
T  5835310 tgtctgacaccgacacatataattacactgaattatgttattttctcaaac 5835260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 640171 - 640134
Alignment:
Q  219 gacaccgacacatataattacactgaattatttgattt 256  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  640171 gacaccgacacatataattacactgaattatgtgattt 640134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 24146879 - 24146830
Alignment:
Q  214 tgtccgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    |||| |||||||||||||||||||| | |||||||| |||||||||||||    
T  24146879 tgtcagacaccgacacatataattatattgaattatgtgattttctaaaa 24146830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 28155673 - 28155588
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccctgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||  |||| | || |||| ||||||||||  ||||||||||||||||| | ||||||||| ||||||| | |||||||    
T  28155673 ctatgaagcacggacattccttggattaggcgtgtcctggtgtccgacaccgacacttgtaattacaccgaattatgtaattttct 28155588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 32287459 - 32287504
Alignment:
Q  214 tgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||    
T  32287459 tgtccgacaccgacacatatacttgcactgaattatgtgattttct 32287504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 15680873 - 15680829
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| |||||||||||| |||||| |||||||    
T  15680873 gtgtccgacaccgacacttataattacactaaattatgtgatttt 15680829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 26733368 - 26733324
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||||| |||||| |||||||||| |||||||    
T  26733368 gtgtccgacaccgacacatttaattagactgaattatgtgatttt 26733324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 2948739 - 2948697
Alignment:
Q  221 caccgacacatataattacactgaattatttgattttctaaaa 263  Q
    |||||||||||||||||||||| |||||  |||||||||||||    
T  2948739 caccgacacatataattacactaaattacgtgattttctaaaa 2948697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 3520345 - 3520383
Alignment:
Q  221 caccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  3520345 caccgacacatataattacattgaattatatgattttct 3520383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 6490837 - 6490779
Alignment:
Q  172 aactatgaagcatagacacttctcggataaggcgtgtccctgtgtccgacaccgacaca 230  Q
    ||||||||||||  |||||| ||||||| | ||||||||| ||||| ||||||||||||    
T  6490837 aactatgaagcacggacactcctcggattaagcgtgtcccggtgtcggacaccgacaca 6490779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 12278898 - 12278853
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||| ||||||||||||||||||||||||| | |||||||    
T  12278898 gtgtccgacac-gacacatataattacactgaattatgtcattttct 12278853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 21880216 - 21880170
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||| | ||||||||||||||||| | |||||||    
T  21880216 gtgtccgacaccgacacttgtaattacactgaattatgtaattttct 21880170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 259
Target Start/End: Complemental strand, 22868094 - 22868060
Alignment:
Q  225 gacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||||||| |||||||||    
T  22868094 gacacatataattacactgaattatgtgattttct 22868060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 598327 - 598278
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccctgtgtccgacac 223  Q
    ||||||||||  |||||||||||||| ||||||||||| ||||| |||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacac 598278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 7328691 - 7328732
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||||||| |||||| | |||||||    
T  7328691 cgacaccgacacatataattacactaaattatgttattttct 7328732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 7758381 - 7758336
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    ||||||||||||| ||||||| |||||||||| | |||||||||||    
T  7758381 cgacaccgacacacataattatactgaattatataattttctaaaa 7758336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 247
Target Start/End: Original strand, 9949071 - 9949100
Alignment:
Q  218 cgacaccgacacatataattacactgaatt 247  Q
    ||||||||||||||||||||||||||||||    
T  9949071 cgacaccgacacatataattacactgaatt 9949100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 15902879 - 15902842
Alignment:
Q  220 acaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  15902879 acaccgacacatataattacactaaattatgtgatttt 15902842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 16341555 - 16341514
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||| |||||||||||||||| |||||| |||||||||    
T  16341555 cgacaccggcacatataattacacttaattatgtgattttct 16341514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 17307952 - 17307911
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||| |||||||||||||||||||||||| | |||||||    
T  17307952 cgacaccaacacatataattacactgaattatgttattttct 17307911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 18212973 - 18213010
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccc 211  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  18212973 ctatgaagcacagacactcctcggataaggcgtgtccc 18213010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 18227008 - 18226959
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttctaaa 262  Q
    |||| |||||||||||||||| |||| |||||||||| ||||||| ||||    
T  18227008 gtgttcgacaccgacacatatgattatactgaattatatgattttataaa 18226959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 19992060 - 19992019
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||| ||||||||||||||| ||| |||||||||    
T  19992060 cgacaccgacacttataattacactgaaatatgtgattttct 19992019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 22484088 - 22484039
Alignment:
Q  214 tgtccgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    |||| |||||||||||||||||||| ||||||||||   |||||||||||    
T  22484088 tgtctgacaccgacacatataattatactgaattatgcaattttctaaaa 22484039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 27732243 - 27732280
Alignment:
Q  222 accgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||||||| | |||||||    
T  27732243 accgacacatataattacactgaattatgtaattttct 27732280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 32308179 - 32308138
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||| |||||||| |||||||||||||||| |||||||||    
T  32308179 cgacactgacacatacaattacactgaattatgtgattttct 32308138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 40131939 - 40131988
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccctgtgtccgacac 223  Q
    |||||||||| ||||||| ||||||| || |||||||||||||| |||||    
T  40131939 ctatgaagcacagacactcctcggattagacgtgtccctgtgtcggacac 40131988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 19206108 - 19206068
Alignment:
Q  219 gacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||| | |||||||| |||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttct 19206068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 21826337 - 21826293
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||||||| |||| ||||| |||| |||||||    
T  21826337 gtgtccgacaccgacacatattattagactgagttatgtgatttt 21826293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 25481966 - 25481922
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    |||||||||||| |||| | ||||||||||||||||| |||||||    
T  25481966 gtgtccgacaccaacacttgtaattacactgaattatgtgatttt 25481922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 259
Target Start/End: Original strand, 17425348 - 17425430
Alignment:
Q  175 tatgaagcatagacacttctcggataaggcgtgtccctgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||| ||||||| ||||||| |||||||||| |||||| ||||| ||||||||  |||||||||||||||  ||||||||    
T  17425348 tatgaagcacagacactcctcggattaggcgtgtccttgtgtctgacacagacacata--attacactgaattatgcgattttct 17425430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 16189813 - 16189727
Alignment:
Q  176 atgaagcatagacacttctcggataaggcgtgtccc---tgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||| |||||||||| ||| || | ||||||   |||||||| |||||||||| |||||||||||||||||| |||||||||    
T  16189813 atgaagcatggacacttctcagattagccatgtcccggctgtgtccgtcaccgacacacataattacactgaattatgtgattttct 16189727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 22440559 - 22440641
Alignment:
Q  176 atgaagcatagacacttctcggataaggcgtgtccctgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||  |||||| ||||||| ||||||||||  ||||| ||||| | ||||||||||||||||||||||| |||||||||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggacac-gtcacatataattacactgaattatgtgattttct 22440641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 40179631 - 40179675
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||    
T  40179631 gtgtccgacaccgacgcatataattacactgaattatgtgatttt 40179675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 54580018 - 54580062
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||    
T  54580018 gtgtccgacaccgacacttataattacactgaattatgtgatttt 54580062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 8423713 - 8423759
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||||    
T  8423713 gtgtccgacaccgacatttataattacactgaattatgtgattttct 8423759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 10499227 - 10499311
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccctgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||  |||| | ||||||| ||||||||  | | ||||||||| |||||||||||||||||| |||||| |||||||||    
T  10499227 ctatgaagcacggacaatcctcggattaggcgtgtgtcgg-gtccgacactgacacatataattacactaaattatgtgattttct 10499311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 26504303 - 26504340
Alignment:
Q  222 accgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||| |||||||||||||    
T  26504303 accgacacatataattacactgaactatttgattttct 26504340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 44132644 - 44132689
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    ||||||||||||||||||||| |||||||||  |||||||||||||    
T  44132644 cgacaccgacacatataattatactgaattacgtgattttctaaaa 44132689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 5775359 - 5775399
Alignment:
Q  219 gacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||| |||||| |||||||||    
T  5775359 gacaccgacacatataattacacttaattatgtgattttct 5775399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 12797333 - 12797377
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | ||||||||||||||||| |||||||    
T  12797333 gtgtccgacaccgacacttgtaattacactgaattatgtgatttt 12797377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 223 - 259
Target Start/End: Complemental strand, 40613504 - 40613468
Alignment:
Q  223 ccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||||||||| |||||||||    
T  40613504 ccgacacatataattacactgaattatgtgattttct 40613468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 42640593 - 42640549
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | ||||||||||||||||| |||||||    
T  42640593 gtgtccgacaccgacacttgtaattacactgaattatgtgatttt 42640549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 49431090 - 49431046
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | ||||||||||||||||| |||||||    
T  49431090 gtgtccgacaccgacacttttaattacactgaattatgtgatttt 49431046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 257
Target Start/End: Original strand, 22234890 - 22234929
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  22234890 cgacaccgacacatagaattacactgaattatgtgatttt 22234929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 265
Target Start/End: Original strand, 46083991 - 46084038
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttctaaaaca 265  Q
    |||||||||||||||||||||||||  ||||| |||||| ||||||||    
T  46083991 cgacaccgacacatataattacactagattatgtgatttactaaaaca 46084038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 8402737 - 8402783
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||| ||||| || |||||||||||||||||||||| |||||||||    
T  8402737 gtgtctgacactgagacatataattacactgaattatatgattttct 8402783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 247
Target Start/End: Original strand, 20950422 - 20950456
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaatt 247  Q
    ||||| |||||||||||||||||||||||||||||    
T  20950422 gtgtctgacaccgacacatataattacactgaatt 20950456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 30094112 - 30094066
Alignment:
Q  194 tcggataaggcgtgtccctgtgtccgacaccgacacatataattaca 240  Q
    |||||| ||||||||||| ||||||||||||||||| | ||||||||    
T  30094112 tcggattaggcgtgtcccggtgtccgacaccgacacttgtaattaca 30094066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 5414172 - 5414217
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    ||||||||| |||||||||||||||| ||| | |||||||||||||    
T  5414172 cgacaccgatacatataattacactgcattttgtgattttctaaaa 5414217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 7970578 - 7970537
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||| | |||||||||||||||||||||| |||||||||    
T  7970578 cgacaccaaaacatataattacactgaattatatgattttct 7970537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 259
Target Start/End: Complemental strand, 9996903 - 9996858
Alignment:
Q  214 tgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||| |||||||| ||||||||||| |||||||||| |||||||||    
T  9996903 tgtctgacaccgagacatataattatactgaattatgtgattttct 9996858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 13134509 - 13134468
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||| ||||||||||||||||||| |||||| |||||||||    
T  13134509 cgacatcgacacatataattacactaaattatgtgattttct 13134468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 15029825 - 15029788
Alignment:
Q  217 ccgacaccgacacatataattacactgaattatttgat 254  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  15029825 ccgacaccaacacatataattacactgaattatgtgat 15029788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 19097894 - 19097939
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    ||||||||||| ||||||||| |||||||||  |||||||||||||    
T  19097894 cgacaccgacaaatataattatactgaattacgtgattttctaaaa 19097939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 28964186 - 28964231
Alignment:
Q  172 aactatgaagcatagacacttctcggataaggcgtgtccctgtgtc 217  Q
    ||||||||||||| |||||| ||||||| ||||||||||| |||||    
T  28964186 aactatgaagcatggacactcctcggattaggcgtgtcccagtgtc 28964231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 30982878 - 30982919
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||| ||||||||||||||| ||| |||||||||    
T  30982878 cgacaccgacacttataattacactgaaatatgtgattttct 30982919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 36635375 - 36635342
Alignment:
Q  226 acacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||| |||||||||    
T  36635375 acacatataattacactgaattatgtgattttct 36635342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 42015022 - 42014989
Alignment:
Q  214 tgtccgacaccgacacatataattacactgaatt 247  Q
    ||||||||||| ||||||||||||||||||||||    
T  42015022 tgtccgacaccaacacatataattacactgaatt 42014989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 46160955 - 46160914
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||| |||||||||||| | |||||||    
T  46160955 cgacaccgacacatataataacactgaattatgttattttct 46160914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 482233 - 482269
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattat 249  Q
    ||||||||||||||||  |||||||||||||||||||    
T  482233 gtgtccgacaccgacagttataattacactgaattat 482269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 715545 - 715593
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccctgtgtccgaca 222  Q
    ||||||||||  |||||| ||||||| ||||||||||||||||| ||||    
T  715545 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 715593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 752871 - 752919
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccctgtgtccgaca 222  Q
    ||||||||||  |||||| ||||||| ||||||||||||||||| ||||    
T  752871 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 752919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 6879460 - 6879504
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | |||||||||| |||||| |||||||    
T  6879460 gtgtccgacaccgacacttgtaattacacttaattatgtgatttt 6879504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 12895269 - 12895313
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| |||||||||||  |||||| |||||||    
T  12895269 gtgtccgacaccgacacttataattacacaaaattatgtgatttt 12895313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 16073458 - 16073422
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattat 249  Q
    ||||||||||||||||| | |||||||||||||||||    
T  16073458 gtgtccgacaccgacacttgtaattacactgaattat 16073422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 18576038 - 18576078
Alignment:
Q  219 gacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||| |||||||||||||||| ||||||| |||||||||    
T  18576038 gacaccaacacatataattacaccgaattatgtgattttct 18576078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 23292981 - 23293025
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | |||||| |||||||||| |||||||    
T  23292981 gtgtccgacaccgacacttgtaattatactgaattatgtgatttt 23293025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 28964243 - 28964287
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||| ||||| | ||||||||||||||||| |||||||    
T  28964243 gtgtccgacacagacacttgtaattacactgaattatgtgatttt 28964287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 29205508 - 29205464
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    |||||| |||||||||| | ||||||||||||||||| |||||||    
T  29205508 gtgtccaacaccgacacttgtaattacactgaattatgtgatttt 29205464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 35157980 - 35158024
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||    
T  35157980 gtgtcagacaccgacacttataattacactaaattatgtgatttt 35158024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 259
Target Start/End: Original strand, 4786336 - 4786379
Alignment:
Q  216 tccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  4786336 tccgacaccgacacatataattacactgaattatgtgattttct 4786379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 34897150 - 34897103
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  34897150 tgtgtccgacatcgacacatataattacactgaattatgtgattttct 34897103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 13844591 - 13844637
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttct 13844637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 260
Target Start/End: Original strand, 26902175 - 26902217
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttcta 260  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  26902175 cgacaccgacacatataattacactgaattatgtgattttcta 26902217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 11833969 - 11833893
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtc----cctgtgtccgacaccgacacatataattacactgaat 246  Q
    |||||||||| ||||||| ||||||| ||||||||     | ||||||||||||| |||||||||||||||||||||    
T  11833969 ctatgaagcacagacactcctcggattaggcgtgtaattacatgtgtccgacaccaacacatataattacactgaat 11833893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 257
Target Start/End: Original strand, 11927086 - 11927125
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgatttt 257  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  11927086 cgacaccgacacatataattacactgaattatgtgatttt 11927125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 18964234 - 18964191
Alignment:
Q  220 acaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    ||||||||||||||||||||| |||||||| |||||||||||||    
T  18964234 acaccgacacatataattacattgaattatgtgattttctaaaa 18964191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 27213649 - 27213565
Alignment:
Q  169 ttcaactatgaagcatagacacttctcggataaggcgtgtccctgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||| ||||||||||  |||||||||||||| || |||||||| |||||||      ||||||||||||||| |||||||| |||||||||    
T  27213649 ttcacctatgaagcacggacacttctcggattagccgtgtcccggtgtccg------acacatataattacagtgaattatgtgattttct 27213565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 3025615 - 3025569
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||| ||||| ||||||||||||||||||| |||||||||    
T  3025615 gtgtccgacactgacacctataattacactgaattatgtgattttct 3025569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 8847315 - 8847277
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattt 256  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  8847315 cgacaccgacacatataattacactgaattatgtgattt 8847277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 28747430 - 28747480
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    |||||||||||||||||||||||||||| |||  ||| |||||||||||||    
T  28747430 gtgtccgacaccgacacatataattacattgagctatctgattttctaaaa 28747480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 31236572 - 31236618
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||| |||||||||||||||||||| |||||||| |||||||||    
T  31236572 gtgtccgtcaccgacacatataattacattgaattatgtgattttct 31236618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 33405379 - 33405425
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||||||||| |||||| || ||||||    
T  33405379 gtgtccgacaccgacacatataattacactaaattatgtgtttttct 33405425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 12606825 - 12606870
Alignment:
Q  214 tgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||| |||||||||||||||||||||| |||||||| |||||||||    
T  12606825 tgtctgacaccgacacatataattacattgaattatatgattttct 12606870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 43737806 - 43737851
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttc 258  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||||    
T  43737806 gtgtccgacaccgacacatataattacactgtattttgtgattttc 43737851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 4948716 - 4948672
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | ||||||||||||||||| |||||||    
T  4948716 gtgtccgacaccgacacttgtaattacactgaattatgtgatttt 4948672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 14134757 - 14134717
Alignment:
Q  219 gacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||| |||||||||||||||||||| |||||||||    
T  14134757 gacaccgacatatataattacactgaattatgtgattttct 14134717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 11803316 - 11803277
Alignment:
Q  220 acaccgacacatataattacactgaattatttgattttct 259  Q
    ||||| |||||||||||||||||||||||| |||||||||    
T  11803316 acaccaacacatataattacactgaattatgtgattttct 11803277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 257
Target Start/End: Complemental strand, 11944724 - 11944685
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  11944724 cgacaccgacacatataattacactgagttatgtgatttt 11944685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 12985457 - 12985410
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||| |||| |||||| |||||||| |||||||||    
T  12985457 tgtgtccgacaccgacatatatgattacattgaattatgtgattttct 12985410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 249
Target Start/End: Original strand, 28384995 - 28385025
Alignment:
Q  219 gacaccgacacatataattacactgaattat 249  Q
    |||||||||||||||||||||||||||||||    
T  28384995 gacaccgacacatataattacactgaattat 28385025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 38079063 - 38079017
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||| |||| |||||||||||||||||| || |||||||||    
T  38079063 gtgtccgacatcgacgcatataattacactgaatcatgtgattttct 38079017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 40332255 - 40332209
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||| |||||||||| | ||||||||||||||||| |||||||||    
T  40332255 gtgtcccacaccgacacttgtaattacactgaattatgtgattttct 40332209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 248
Target Start/End: Complemental strand, 8293883 - 8293854
Alignment:
Q  219 gacaccgacacatataattacactgaatta 248  Q
    ||||||||||||||||||||||||||||||    
T  8293883 gacaccgacacatataattacactgaatta 8293854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 31109514 - 31109559
Alignment:
Q  214 tgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||| |||||||||| ||| |||||||| |||||||||||    
T  31109514 tgtccgacactgacacatatagttagactgaattgtttgattttct 31109559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 34451037 - 34451082
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    |||||||||||||||||||||||||| ||| | |||||||| ||||    
T  34451037 cgacaccgacacatataattacactgcattttgtgattttcaaaaa 34451082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 20679396 - 20679436
Alignment:
Q  219 gacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||| ||||||||||||||| ||| |||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttct 20679436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 20873133 - 20873089
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | |||||||||| |||||| |||||||    
T  20873133 gtgtccgacaccgacacttgtaattacactaaattatgtgatttt 20873089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 24613584 - 24613540
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | |||||||||| |||||| |||||||    
T  24613584 gtgtccgacaccgacacttgtaattacacttaattatgtgatttt 24613540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 31580124 - 31580168
Alignment:
Q  215 gtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||| |||||| |||||||||||| |||||| |||||||||    
T  31580124 gtccgacatcgacacctataattacactcaattatgtgattttct 31580168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 33382020 - 33382060
Alignment:
Q  219 gacaccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||||||||||||||| ||||||||| | |||||||    
T  33382020 gacaccgacacatataattactctgaattatgtcattttct 33382060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 5996 - 6041
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    |||||||||||||||||||||||||| ||| | |||||||||||||    
T  5996 cgacaccgacacatataattacactgcattttgtgattttctaaaa 6041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 44529 - 44566
Alignment:
Q  222 accgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||||||| |||||||||    
T  44529 accgacacatataattacactgaattatgtgattttct 44566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 9957 - 9912
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    |||||||||||||||||||||||||| ||| | |||||||||||||    
T  9957 cgacaccgacacatataattacactgcattttatgattttctaaaa 9912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 9747 - 9788
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  9747 cgacaccgacacatataattacactgaattaagtgattttct 9788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 135312 - 135353
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||||||||||||||| ||||||| |||||||||    
T  135312 cgacaccgacacatataattacacagaattatgtgattttct 135353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 70342 - 70306
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattat 249  Q
    ||||||||||||||||| |||||||||||||||||||    
T  70342 gtgtccgacaccgacacttataattacactgaattat 70306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 257
Target Start/End: Complemental strand, 23479 - 23440
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgatttt 257  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  23479 cgacaccgacacttataattacactgaattatgtgatttt 23440  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 90908 - 90861
Alignment:
Q  212 tgtgtccgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||| |||| ||||| |||||||||||||||||||| |||||||||    
T  90908 tgtgtctgacatcgacatatataattacactgaattatatgattttct 90861  T

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Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 99952 - 99907
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttctaaaa 263  Q
    ||||||| ||||||||||||||| |||||||| | |||||||||||    
T  99952 cgacaccaacacatataattacattgaattatgttattttctaaaa 99907  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 8795 - 8761
Alignment:
Q  175 tatgaagcatagacacttctcggataaggcgtgtc 209  Q
    |||||||||| ||||||||||||||||||||||||    
T  8795 tatgaagcatggacacttctcggataaggcgtgtc 8761  T

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Target: scaffold0044 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 53236 - 53198
Alignment:
Q  221 caccgacacatataattacactgaattatttgattttct 259  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  53236 caccgacacttataattacactgaattatgtgattttct 53198  T

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Target: scaffold0236 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 25768 - 25809
Alignment:
Q  218 cgacaccgacacatataattacactgaattatttgattttct 259  Q
    |||||||||||| |||||||||||| |||||| |||||||||    
T  25768 cgacaccgacacttataattacactaaattatgtgattttct 25809  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 241724 - 241675
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccctgtgtccgacac 223  Q
    ||||||||||  |||||||||||||| ||||||||||| ||||| |||||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacac 241675  T

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Target: scaffold0793 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 4821 - 4869
Alignment:
Q  174 ctatgaagcatagacacttctcggataaggcgtgtccctgtgtccgaca 222  Q
    ||||||||||  |||||| ||||||| ||||||||||||||||| ||||    
T  4821 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 4869  T

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Target: scaffold0652 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 457 - 501
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattatttgatttt 257  Q
    ||||||||||||||||| | ||||||||||||||| | |||||||    
T  457 gtgtccgacaccgacacttgtaattacactgaattttgtgatttt 501  T

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Target: scaffold0227 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 15095 - 15047
Alignment:
Q  169 ttcaactatgaagcatagacacttctcggataaggcgtgtccctgtgtc 217  Q
    |||| |||||||||| | ||||| ||||||||||||||||||| |||||    
T  15095 ttcatctatgaagcacaaacactcctcggataaggcgtgtccccgtgtc 15047  T

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Target: scaffold0083 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 45525 - 45561
Alignment:
Q  213 gtgtccgacaccgacacatataattacactgaattat 249  Q
    ||||||||||||||||| | |||||||||||||||||    
T  45525 gtgtccgacaccgacacttgtaattacactgaattat 45561  T

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