View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2513_high_11 (Length: 315)
Name: NF2513_high_11
Description: NF2513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2513_high_11 |
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Alignment Details
Target: chr6 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 13 - 298
Target Start/End: Original strand, 6971887 - 6972172
Alignment:
| Q |
13 |
agatttacatcaaacatttcaaaaatacgtagattttattttattttcgaaaatttaatataccaagtttaaaattataattgttcaatattgatccaac |
112 |
Q |
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| T |
6971887 |
agatttacatcaaacatttcaaaaatacgtagattttattttattttcgaaaatttgatataccaagtttaaaattaaaattgttacatattgatctaac |
6971986 |
T |
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| Q |
113 |
attcattgatacagggtgactgtgtgaattcaggatatcccaaccgcaaggaatcatgatacaaaaattgagactaattaattagtgacacgctaataaa |
212 |
Q |
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| T |
6971987 |
attcattgatacagggtgactgtgtgaattcaggatatcccaaccacaaggaatcatgatacaaaaattgagactaattaattagtgacacgctaataaa |
6972086 |
T |
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| Q |
213 |
gtttacactagttaaagttgtgtttctaaattgccattgtgattacgccacaaaccttgatattagggcaaaatacggtgggatac |
298 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |
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| T |
6972087 |
gtttacactagttaaagttgtgtttctaaattgccattgtgattacgccacaaaccttgatattaaggcaaaatacggttggatac |
6972172 |
T |
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