View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2513_high_5 (Length: 449)

Name: NF2513_high_5
Description: NF2513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2513_high_5
NF2513_high_5
[»] chr6 (25 HSPs)
chr6 (1-432)||(17584710-17585141)
chr6 (267-351)||(32521881-32521965)
chr6 (212-350)||(12767552-12767686)
chr6 (204-353)||(30461427-30461572)
chr6 (245-350)||(2092283-2092384)
chr6 (210-350)||(12409405-12409541)
chr6 (243-351)||(21802549-21802653)
chr6 (296-351)||(31282190-31282245)
chr6 (260-326)||(33275791-33275858)
chr6 (268-351)||(32114352-32114435)
chr6 (296-350)||(3751958-3752012)
chr6 (243-348)||(7448254-7448354)
chr6 (267-351)||(31882454-31882538)
chr6 (275-350)||(28494161-28494236)
chr6 (275-350)||(29806570-29806645)
chr6 (296-351)||(33950831-33950886)
chr6 (307-349)||(3767160-3767202)
chr6 (307-349)||(9241476-9241518)
chr6 (307-349)||(12025613-12025655)
chr6 (209-348)||(14313183-14313318)
chr6 (209-351)||(21847314-21847450)
chr6 (206-267)||(22268499-22268560)
chr6 (308-349)||(25528352-25528393)
chr6 (296-352)||(6937848-6937904)
chr6 (296-351)||(15499440-15499496)
[»] chr5 (31 HSPs)
chr5 (212-351)||(12585598-12585738)
chr5 (243-353)||(19500787-19500898)
chr5 (211-351)||(13279473-13279609)
chr5 (243-349)||(3933925-3934027)
chr5 (267-351)||(14594115-14594199)
chr5 (243-350)||(36762140-36762243)
chr5 (210-348)||(6029447-6029581)
chr5 (267-351)||(4876756-4876840)
chr5 (243-351)||(20183958-20184062)
chr5 (299-353)||(141561-141615)
chr5 (245-351)||(31476386-31476488)
chr5 (243-351)||(8573293-8573397)
chr5 (243-351)||(27979257-27979361)
chr5 (212-348)||(31601491-31601623)
chr5 (243-351)||(36737393-36737497)
chr5 (268-351)||(40026975-40027058)
chr5 (211-349)||(1406182-1406316)
chr5 (209-351)||(15175816-15175954)
chr5 (267-351)||(5138909-5138993)
chr5 (296-348)||(19409152-19409204)
chr5 (267-351)||(20570204-20570288)
chr5 (267-351)||(36742167-36742251)
chr5 (275-358)||(38955497-38955581)
chr5 (307-349)||(20691211-20691253)
chr5 (210-267)||(2074739-2074796)
chr5 (296-345)||(18338138-18338187)
chr5 (240-318)||(31886358-31886432)
chr5 (306-351)||(40956840-40956885)
chr5 (298-350)||(6123871-6123923)
chr5 (240-283)||(15175331-15175375)
chr5 (307-351)||(24624913-24624957)
[»] chr3 (27 HSPs)
chr3 (212-351)||(49765073-49765208)
chr3 (212-349)||(11397584-11397717)
chr3 (243-349)||(54403587-54403689)
chr3 (210-351)||(40036340-40036477)
chr3 (243-361)||(1262425-1262540)
chr3 (212-346)||(13623172-13623301)
chr3 (212-350)||(25480524-25480658)
chr3 (267-351)||(27394299-27394383)
chr3 (260-348)||(48841970-48842058)
chr3 (296-358)||(6296681-6296744)
chr3 (243-351)||(14600405-14600509)
chr3 (207-351)||(48223552-48223692)
chr3 (269-347)||(3541032-3541110)
chr3 (307-349)||(11056494-11056536)
chr3 (296-350)||(30127669-30127723)
chr3 (307-349)||(37183697-37183739)
chr3 (267-351)||(17764905-17764990)
chr3 (267-351)||(19066225-19066310)
chr3 (308-349)||(41865075-41865116)
chr3 (243-353)||(44499986-44500091)
chr3 (211-267)||(1263083-1263139)
chr3 (202-266)||(5984934-5984998)
chr3 (243-351)||(27255313-27255418)
chr3 (245-350)||(30605291-30605392)
chr3 (299-351)||(33978635-33978687)
chr3 (296-351)||(49080034-49080090)
chr3 (235-267)||(54404152-54404184)
[»] chr2 (31 HSPs)
chr2 (211-351)||(31709055-31709196)
chr2 (211-350)||(22298196-22298331)
chr2 (243-351)||(11796755-11796858)
chr2 (245-351)||(34173658-34173760)
chr2 (243-351)||(5790035-5790137)
chr2 (243-320)||(5475109-5475182)
chr2 (245-353)||(37199542-37199646)
chr2 (266-348)||(3045546-3045628)
chr2 (297-353)||(41077569-41077625)
chr2 (296-351)||(31597299-31597354)
chr2 (243-351)||(33146060-33146164)
chr2 (267-354)||(37009601-37009688)
chr2 (268-351)||(43439743-43439826)
chr2 (297-351)||(4437923-4437977)
chr2 (280-350)||(40020157-40020227)
chr2 (245-351)||(28167567-28167669)
chr2 (243-348)||(7939352-7939453)
chr2 (296-351)||(17829663-17829718)
chr2 (296-351)||(37329774-37329829)
chr2 (307-349)||(551923-551965)
chr2 (267-353)||(11564411-11564497)
chr2 (307-353)||(11942100-11942146)
chr2 (307-349)||(16110580-16110622)
chr2 (307-349)||(20893305-20893347)
chr2 (243-354)||(22606924-22607031)
chr2 (245-348)||(40769318-40769416)
chr2 (275-351)||(32023023-32023100)
chr2 (269-349)||(13873932-13874012)
chr2 (269-349)||(14014057-14014137)
chr2 (210-262)||(37198921-37198973)
chr2 (307-358)||(43657517-43657569)
[»] chr1 (25 HSPs)
chr1 (240-353)||(49129618-49129727)
chr1 (211-351)||(45737298-45737434)
chr1 (212-351)||(27225670-27225805)
chr1 (204-348)||(45737986-45738126)
chr1 (232-350)||(10012397-10012511)
chr1 (245-350)||(1114828-1114929)
chr1 (210-345)||(16536364-16536495)
chr1 (267-353)||(28198066-28198152)
chr1 (270-351)||(33126798-33126879)
chr1 (245-320)||(4667518-4667594)
chr1 (211-351)||(25990422-25990558)
chr1 (210-346)||(36604719-36604851)
chr1 (205-267)||(9998023-9998085)
chr1 (209-351)||(7307524-7307664)
chr1 (243-349)||(18406555-18406657)
chr1 (245-351)||(19071739-19071840)
chr1 (245-351)||(19119629-19119730)
chr1 (212-349)||(50143379-50143512)
chr1 (296-351)||(27930843-27930898)
chr1 (299-350)||(29777950-29778001)
chr1 (268-351)||(44648666-44648749)
chr1 (296-346)||(25087375-25087425)
chr1 (268-350)||(36512004-36512086)
chr1 (211-267)||(1846564-1846620)
chr1 (307-351)||(51612411-51612455)
[»] chr4 (28 HSPs)
chr4 (235-350)||(21037316-21037427)
chr4 (209-351)||(51019643-51019781)
chr4 (243-348)||(6711258-6711359)
chr4 (211-351)||(23721996-23722132)
chr4 (269-348)||(35666000-35666079)
chr4 (244-358)||(32448877-32448988)
chr4 (243-350)||(37424393-37424495)
chr4 (270-358)||(7479917-7480005)
chr4 (211-325)||(8138316-8138426)
chr4 (270-351)||(49702987-49703068)
chr4 (243-348)||(25010005-25010106)
chr4 (267-351)||(33046606-33046690)
chr4 (267-351)||(50825230-50825314)
chr4 (275-351)||(54092783-54092859)
chr4 (245-353)||(4949962-4950066)
chr4 (243-351)||(16192260-16192364)
chr4 (212-351)||(20544963-20545098)
chr4 (306-358)||(4963982-4964035)
chr4 (210-348)||(7797561-7797695)
chr4 (307-358)||(796910-796962)
chr4 (307-358)||(26705120-26705171)
chr4 (313-358)||(6232524-6232570)
chr4 (307-349)||(23265721-23265763)
chr4 (248-346)||(17723369-17723463)
chr4 (267-344)||(44664752-44664829)
chr4 (307-358)||(12250770-12250822)
chr4 (307-351)||(19313431-19313475)
chr4 (299-351)||(46076426-46076478)
[»] chr8 (36 HSPs)
chr8 (245-358)||(17564698-17564807)
chr8 (211-336)||(44284310-44284431)
chr8 (243-348)||(34363939-34364039)
chr8 (268-348)||(8443273-8443353)
chr8 (211-346)||(32903609-32903741)
chr8 (245-348)||(14879550-14879649)
chr8 (212-353)||(34925348-34925490)
chr8 (209-350)||(43776941-43777078)
chr8 (248-351)||(24809616-24809716)
chr8 (267-346)||(41262122-41262201)
chr8 (269-351)||(11760012-11760094)
chr8 (299-353)||(39998978-39999032)
chr8 (207-351)||(30354472-30354617)
chr8 (296-349)||(31740096-31740149)
chr8 (243-349)||(36016707-36016808)
chr8 (258-351)||(37872812-37872905)
chr8 (307-351)||(11141006-11141050)
chr8 (297-353)||(13439557-13439612)
chr8 (267-358)||(37266079-37266171)
chr8 (267-351)||(40791094-40791178)
chr8 (296-347)||(4257210-4257261)
chr8 (266-353)||(17734855-17734941)
chr8 (243-351)||(37836947-37837051)
chr8 (248-351)||(3940162-3940261)
chr8 (307-349)||(6293132-6293174)
chr8 (307-349)||(14364396-14364438)
chr8 (211-269)||(40134143-40134201)
chr8 (267-351)||(253571-253656)
chr8 (267-351)||(662202-662287)
chr8 (267-351)||(848000-848085)
chr8 (275-351)||(17496315-17496392)
chr8 (301-350)||(21304579-21304628)
chr8 (210-267)||(29636411-29636468)
chr8 (240-269)||(42198563-42198592)
chr8 (266-351)||(44746221-44746306)
chr8 (211-267)||(14880213-14880269)
[»] chr7 (30 HSPs)
chr7 (215-350)||(3391755-3391886)
chr7 (243-350)||(40401497-40401600)
chr7 (262-351)||(5227893-5227982)
chr7 (269-353)||(23232912-23232996)
chr7 (208-351)||(16425954-16426093)
chr7 (209-348)||(22711626-22711761)
chr7 (243-354)||(27619575-27619682)
chr7 (245-327)||(36688828-36688906)
chr7 (266-351)||(42813067-42813152)
chr7 (296-348)||(48872086-48872138)
chr7 (270-349)||(11696258-11696337)
chr7 (243-351)||(38790098-38790202)
chr7 (296-358)||(26200415-26200477)
chr7 (275-349)||(26902711-26902785)
chr7 (296-353)||(33869890-33869947)
chr7 (213-351)||(46011064-46011198)
chr7 (307-358)||(2146800-2146852)
chr7 (243-323)||(11639922-11639998)
chr7 (243-351)||(29615542-29615646)
chr7 (264-351)||(32387523-32387610)
chr7 (243-351)||(38987778-38987882)
chr7 (275-343)||(23727822-23727887)
chr7 (243-326)||(29736157-29736236)
chr7 (307-349)||(40344374-40344416)
chr7 (267-348)||(8123225-8123305)
chr7 (298-351)||(19332995-19333048)
chr7 (269-350)||(45941500-45941581)
chr7 (307-358)||(29823956-29824008)
chr7 (299-351)||(34834894-34834946)
chr7 (268-348)||(36848445-36848525)
[»] scaffold0159 (1 HSPs)
scaffold0159 (243-351)||(34408-34510)
[»] scaffold0068 (1 HSPs)
scaffold0068 (243-351)||(59286-59390)
[»] scaffold0289 (1 HSPs)
scaffold0289 (243-354)||(3990-4096)
[»] scaffold0003 (2 HSPs)
scaffold0003 (208-351)||(14667-14806)
scaffold0003 (208-351)||(28813-28952)
[»] scaffold0043 (1 HSPs)
scaffold0043 (232-342)||(67730-67836)
[»] scaffold0971 (1 HSPs)
scaffold0971 (296-353)||(3174-3231)
[»] scaffold0189 (1 HSPs)
scaffold0189 (267-351)||(11335-11419)
[»] scaffold0004 (1 HSPs)
scaffold0004 (269-349)||(351316-351396)
[»] scaffold0051 (1 HSPs)
scaffold0051 (298-353)||(11573-11627)
[»] scaffold0067 (1 HSPs)
scaffold0067 (307-349)||(18679-18721)
[»] scaffold0036 (1 HSPs)
scaffold0036 (296-336)||(25295-25335)


Alignment Details
Target: chr6 (Bit Score: 352; Significance: 0; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 1 - 432
Target Start/End: Original strand, 17584710 - 17585141
Alignment:
Q  1 accagaaactatttgacaatcttcaatcctcacattggtacaagaatctgtataaatggaaaatatatattttacaatctttaaaatatcaaacaagatc 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  17584710 accagaaactatttgacaatcttcaatcctcacattggtagaagaatctgtataaatggaaaatatatattttacaatctttaaaatatcaaacaagata 17584809  T
Q  101 actggtaatataatgtagcaccaacacttcacattgaaggcatctcgagtatctgaaaggtgtcggtaacattgacaaatatggttacataacttacaat 200  Q
      |||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |    
T  17584810 gttggtaatacaatgtagcaccaacacttcacattgaaggcatctcgagtgtttgaaaggtgtcggtaacattgacaaatatggttacataacttacatt 17584909  T
Q  201 caaatatttaagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttcccctt 300  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17584910 caaatatttaagagtaaattacatttctctaccctaagagaagcttgaattacactcccctcccctccctcttgtgttaaaatatacatttttccccctt 17585009  T
Q  301 gaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctctccctgaaagggaaagattggacggttggtttgttttgaatcggann 400  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||      
T  17585010 gaaaggtaaaatttatactcccctcccttatgagatatttgaattacaacctctccctgaaagggaaagattggatggttggtttgtttttaatcggatt 17585109  T
Q  401 nnnnnngtttgagtttgaatttggtttcagtt 432  Q
          ||||||||||||||||||||||||||    
T  17585110 ttttttgtttgagtttgaatttggtttcagtt 17585141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 267 - 351
Target Start/End: Original strand, 32521881 - 32521965
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||| ||||||||||||||||  || || |||||| ||||||||||||||||| |||| ||| |||||||||||||||||||    
T  32521881 ccctcttatgttaaaatatacattcatttcctttgaaaagtaaaatttatactcccttcccctataagatacttgaattacaacc 32521965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 212 - 350
Target Start/End: Complemental strand, 12767686 - 12767552
Alignment:
Q  212 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaa 311  Q
    |||||||||||| | | ||  |||||| ||||||||||||||||||||||||    |||||| |||||||||||||| ||    |||||||||  |||||    
T  12767686 gagtaaattacactcccctctcctaagagaagcttgaattacactcccctcc----cctcttatgttaaaatatacacttccctcccttgaaaaataaaa 12767591  T
Q  312 tttatactcccctcccgtatgagatacttgaattacaac 350  Q
    ||||||||| |||||| ||  |||| |||||||||||||    
T  12767590 tttatactctcctcccttaaaagatgcttgaattacaac 12767552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 353
Target Start/End: Original strand, 30461427 - 30461572
Alignment:
Q  204 atatttaagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaa 303  Q
    ||||| |||||||||| ||| ||| || |||| |  || |||||| ||||||| ||||||||||    || |||||||||||||| || |  ||||||||    
T  30461427 atattgaagagtaaataacacttccctcccctcaaagatgcttgatttacacttccctcccctc----ttatgttaaaatatacacttctctcccttgaa 30461522  T
Q  304 aggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 353  Q
    | |||| || ||||||||| |||| ||| |||||||||||||||||||||    
T  30461523 aagtaatatgtatactcccttcccttataagatacttgaattacaacctc 30461572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 245 - 350
Target Start/End: Complemental strand, 2092384 - 2092283
Alignment:
Q  245 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 344  Q
    |||||||||||||||||||||||    || | |||||||||||| ||    ||||||||| |||||||||||||||||||||| ||| |||  |||||||    
T  2092384 ttgaattacactcccctcccctc----ttatattaaaatatacacttccatcccttgaaaagtaaaatttatactcccctcccctataagaagcttgaat 2092289  T
Q  345 tacaac 350  Q
    ||||||    
T  2092288 tacaac 2092283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 210 - 350
Target Start/End: Original strand, 12409405 - 12409541
Alignment:
Q  210 aagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaa 309  Q
    |||||||||||||| | | || ||||||| ||||||||||| |||||||||||||||||    | |||||||||||||| | |   || |||||| ||||    
T  12409405 aagagtaaattacactcccctcccctaagagaagcttgaatcacactcccctcccctcc----tatgttaaaatatacactctcctccattgaaaagtaa 12409500  T
Q  310 aatttatactcccctcccgtatgagatacttgaattacaac 350  Q
    ||||||||||  | |||| |||||||| ||| |||| ||||    
T  12409501 aatttatacttacatcccttatgagatgcttaaattgcaac 12409541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 351
Target Start/End: Complemental strand, 21802653 - 21802549
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    ||||||||||||||| |||||||||    || |||||||||||||| |     ||||||||| |||||||||||||||||||||  ||| |||| |||||    
T  21802653 gcttgaattacactctcctcccctc----ttatgttaaaatatacactcccctcccttgaaaagtaaaatttatactcccctcctctataagatgcttga 21802558  T
Q  343 attacaacc 351  Q
    |||||||||    
T  21802557 attacaacc 21802549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 351
Target Start/End: Complemental strand, 31282245 - 31282190
Alignment:
Q  296 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||||| |||||||||||||||||||||||||| |||| ||||||||| ||||    
T  31282245 cccttgaaaagtaaaatttatactcccctcccgtataagatgcttgaattataacc 31282190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 326
Target Start/End: Original strand, 33275791 - 33275858
Alignment:
Q  260 ctcccctcc-ctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcc 326  Q
    ||||||||| ||||| |||||||||||||||||||  ||||||||| |||||||||||| ||||||||    
T  33275791 ctcccctcctctcttatgttaaaatatacatttttctcccttgaaaagtaaaatttatagtcccctcc 33275858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 351
Target Start/End: Complemental strand, 32114435 - 32114352
Alignment:
Q  268 cctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||| |||||||||||||| |  |  ||||||||| ||||||| ||||||||| |||| ||| |||| ||||||||||||||    
T  32114435 cctcttatgttaaaatatacactcctctcccttgaaaagtaaaatgtatactcccttcccttataagatgcttgaattacaacc 32114352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 350
Target Start/End: Original strand, 3751958 - 3752012
Alignment:
Q  296 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac 350  Q
    ||||||||| | |||||||||||||||||||| ||| |||| |||||||||||||    
T  3751958 cccttgaaaagaaaaatttatactcccctcccctataagatgcttgaattacaac 3752012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 348
Target Start/End: Original strand, 7448254 - 7448354
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    ||||||||||||||| |||    || ||||| ||||||||||||||||||   |||||||||  ||||| ||||||||||||||| ||| | || |||||    
T  7448254 gcttgaattacactctcct----tctctcttatgttaaaatatacattttcctcccttgaaaa-taaaagttatactcccctcccctataaaatgcttga 7448348  T
Q  343 attaca 348  Q
    ||||||    
T  7448349 attaca 7448354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 351
Target Start/End: Complemental strand, 31882538 - 31882454
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||||||||| ||||||||| || |  |||||||||  ||||| ||||||||   |||| ||| |||||||||||||||||||    
T  31882538 ccctcttgtgttcaaatatacacttctctcccttgaaaaataaaagttatactcttatcccctataagatacttgaattacaacc 31882454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 28494161 - 28494236
Alignment:
Q  275 tgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac 350  Q
    |||||||||||||||  |   ||||||||| ||||||||||||||| | |||| ||| |||| |||||||||||||    
T  28494161 tgttaaaatatacatcctcctcccttgaaaagtaaaatttatactctcatcccctataagatgcttgaattacaac 28494236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 29806570 - 29806645
Alignment:
Q  275 tgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac 350  Q
    |||||||||||||||  |   ||||||||| ||||||||||||||| | |||| ||| |||| |||||||||||||    
T  29806570 tgttaaaatatacatcctcctcccttgaaaagtaaaatttatactctcatcccctataagatgcttgaattacaac 29806645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 351
Target Start/End: Complemental strand, 33950886 - 33950831
Alignment:
Q  296 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||||||  ||||||| ||||||||||||| ||| |||| ||||||||||||||    
T  33950886 cccttgaaaaataaaattaatactcccctcccctataagatgcttgaattacaacc 33950831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 3767160 - 3767202
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    |||||||||||||| |||||| ||| |||||||||||||||||    
T  3767160 taaaatttatactctcctcccttataagatacttgaattacaa 3767202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 9241518 - 9241476
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  9241518 taaaatttatactcccctcccttataagatgcttgaattacaa 9241476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 12025613 - 12025655
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  12025613 taaaatttatactcccctcccttataagatgcttgaattacaa 12025655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 348
Target Start/End: Original strand, 14313183 - 14313318
Alignment:
Q  209 taagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggta 308  Q
    ||||||||||||||| | | || |||| |  || |||||||||||| ||| |||||||     || |||||||||||||| ||    |||||||||  ||    
T  14313183 taagagtaaattacactcccctcccctcaaagatgcttgaattacattcctctcccctt----ttatgttaaaatatacacttccctcccttgaaaaata 14313278  T
Q  309 aaatttatactcccctcccgtatgagatacttgaattaca 348  Q
    ||||||| ||||||||||| ||| |||| |||||||||||    
T  14313279 aaatttacactcccctcccctataagatgcttgaattaca 14313318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 351
Target Start/End: Complemental strand, 21847450 - 21847314
Alignment:
Q  209 taagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggta 308  Q
    ||||||||||||||||| | || |  ||||  |||||||||||| |||| |||||||||    || |||||||||||||| ||    || ||| || |||    
T  21847450 taagagtaaattacattccccttc--taagaaaagcttgaattagactctcctcccctc----ttatgttaaaatatacacttccctcctttgcaaagta 21847357  T
Q  309 aaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||||||||||||||| || |||||  ||||||| |||||    
T  21847356 aaatttatactcccctcccttaagagatgtttgaattgcaacc 21847314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 22268499 - 22268560
Alignment:
Q  206 atttaagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctc 267  Q
    ||||||||||| |||||| ||| || |||| |  |||||||||||||||||| |||||||||    
T  22268499 atttaagagtacattacacttcccttccctcaaagaagcttgaattacactctcctcccctc 22268560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 25528393 - 25528352
Alignment:
Q  308 aaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  25528393 aaaatttatactcccctcccttataagatgcttgaattacaa 25528352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 352
Target Start/End: Complemental strand, 6937904 - 6937848
Alignment:
Q  296 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacct 352  Q
    ||||||||| |||||||||||||| | ||| | ||| |||| |||||||||||||||    
T  6937904 cccttgaaaagtaaaatttatactacactctcttataagatgcttgaattacaacct 6937848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 351
Target Start/End: Complemental strand, 15499496 - 15499440
Alignment:
Q  296 cccttgaaaggtaaaatttatactcccc-tcccgtatgagatacttgaattacaacc 351  Q
    ||||||||| |||| ||||||||||||| |||| ||| |||| ||||||||||||||    
T  15499496 cccttgaaaagtaagatttatactccccatcccctataagatgcttgaattacaacc 15499440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 8e-31; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 212 - 351
Target Start/End: Original strand, 12585598 - 12585738
Alignment:
Q  212 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccc-tcttgtgttaaaatatacattttttccccttgaaaggtaaa 310  Q
    |||||||||||| ||| || ||||||| || ||||||||||||||||||||||||||| |||| |||||||||||||| |||   ||||||||| |||||    
T  12585598 gagtaaattacacttccctcccctaagagatgcttgaattacactcccctcccctcccctcttatgttaaaatatacactttcctcccttgaaaagtaaa 12585697  T
Q  311 atttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||||||||||| || | |||||| |||||||| |||||    
T  12585698 atttatactccccttccctttgagatgcttgaattgcaacc 12585738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 353
Target Start/End: Original strand, 19500787 - 19500898
Alignment:
Q  243 gcttgaattacactcccctcccctccct-cttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttg 341  Q
    |||||||||||||| |||||| |||||| ||| |||||||||||||| |  |  |||||| || |||||||||||||||||||||| ||| ||||| |||    
T  19500787 gcttgaattacacttccctcctctcccttcttatgttaaaatatacactcctctcccttgcaaagtaaaatttatactcccctcccctataagatatttg 19500886  T
Q  342 aattacaacctc 353  Q
    ||||||||||||    
T  19500887 aattacaacctc 19500898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 211 - 351
Target Start/End: Original strand, 13279473 - 13279609
Alignment:
Q  211 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaa 310  Q
    ||||||||||||| | | || | ||||| ||||||||||||||||| |||||| |||    || ||||||||| |||||| |   ||||||||| |||||    
T  13279473 agagtaaattacactcccctcctctaagagaagcttgaattacacttccctcctctc----ttatgttaaaatctacattctcctcccttgaaaagtaaa 13279568  T
Q  311 atttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||||||||||||| ||  |||| ||||||||||||||    
T  13279569 atttatactcccctcccttaaaagatgcttgaattacaacc 13279609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 349
Target Start/End: Complemental strand, 3934027 - 3933925
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    |||||||||||||| ||||||||||    || |||||||||||||||||     |||||||| |||||||||||||||||||||| ||| |||| |||||    
T  3934027 gcttgaattacacttccctcccctc----ttatgttaaaatatacatttcccttccttgaaaagtaaaatttatactcccctcccttataagatgcttga 3933932  T
Q  343 attacaa 349  Q
    |||||||    
T  3933931 attacaa 3933925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 351
Target Start/End: Original strand, 14594115 - 14594199
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||| |||||||||||||| ||    ||||||||| |||||||||||||||||||||| ||| |||| ||||||||||||||    
T  14594115 ccctcttatgttaaaatatacacttccctcccttgaaaagtaaaatttatactcccctcccttataagatgcttgaattacaacc 14594199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 350
Target Start/End: Original strand, 36762140 - 36762243
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    |||||||||||||||||||||||||    || | |||||||||||| ||    ||||||||| |||||||||||| ||||||||| ||| |||| |||||    
T  36762140 gcttgaattacactcccctcccctc----ttattttaaaatatacacttccctcccttgaaaagtaaaatttatattcccctcccttataagatgcttga 36762235  T
Q  343 attacaac 350  Q
    ||||||||    
T  36762236 attacaac 36762243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 210 - 348
Target Start/End: Original strand, 6029447 - 6029581
Alignment:
Q  210 aagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaa 309  Q
    |||||||||||||| ||| || |||| |  || ||||||||||||||| | ||| |||    || ||||||||||||||||||   ||||| ||| ||||    
T  6029447 aagagtaaattacacttccctcccctcaaagatgcttgaattacactctcatcctctc----ttatgttaaaatatacattttcctcccttaaaaagtaa 6029542  T
Q  310 aatttatactcccctcccgtatgagatacttgaattaca 348  Q
    |||||||| ||||||||| ||| |||| |||||||||||    
T  6029543 aatttatattcccctcccctataagatgcttgaattaca 6029581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 267 - 351
Target Start/End: Original strand, 4876756 - 4876840
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||| |||||||||||||||| |   |||||||||  ||||||||||| ||||||||| ||| |||| ||||||||||||||    
T  4876756 ccctcttatgttaaaatatacattctcctcccttgaaaaataaaatttataatcccctcccttataagatgcttgaattacaacc 4876840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 351
Target Start/End: Complemental strand, 20184062 - 20183958
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    |||||||||||||||||||||||||    || ||||| |||||||| ||    |||||||||  ||||||||||||||||||||| ||| |||| |||||    
T  20184062 gcttgaattacactcccctcccctc----ttatgttacaatatacacttccctcccttgaaaactaaaatttatactcccctcccctataagatgcttga 20183967  T
Q  343 attacaacc 351  Q
    ||| |||||    
T  20183966 attccaacc 20183958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 299 - 353
Target Start/End: Complemental strand, 141615 - 141561
Alignment:
Q  299 ttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 353  Q
    |||||| |||||||||||||||||||||| |||||||| |||||||||| |||||    
T  141615 ttgaaaagtaaaatttatactcccctcccctatgagatgcttgaattactacctc 141561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 245 - 351
Target Start/End: Original strand, 31476386 - 31476488
Alignment:
Q  245 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 344  Q
    |||||||| ||||||||||||||    || |||||||||||||||| |   ||| ||||| ||||||||||||||||| | || ||| |||| |||||||    
T  31476386 ttgaattagactcccctcccctc----ttatgttaaaatatacattctcctcccatgaaaagtaaaatttatactccctttccctataagatgcttgaat 31476481  T
Q  345 tacaacc 351  Q
    |||||||    
T  31476482 tacaacc 31476488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 351
Target Start/End: Complemental strand, 8573397 - 8573293
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    ||||||||||||||| |||    |||||||| |||||||||||||| |     || |||||| |||||||||| ||||||||||| ||| |||| |||||    
T  8573397 gcttgaattacactctcct----tccctcttatgttaaaatatacactcccctcctttgaaaagtaaaatttacactcccctcccctataagatgcttga 8573302  T
Q  343 attacaacc 351  Q
    |||||||||    
T  8573301 attacaacc 8573293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 351
Target Start/End: Original strand, 27979257 - 27979361
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    ||||||||||||||||||||    ||||||| ||||||||||||||||     ||||||||| |||||||| ||||||| ||||| ||| |||| ||| |    
T  27979257 gcttgaattacactcccctc----ccctcttatgttaaaatatacattcccctcccttgaaaagtaaaattaatactcctctcccttataagatgcttaa 27979352  T
Q  343 attacaacc 351  Q
     ||||||||    
T  27979353 cttacaacc 27979361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 348
Target Start/End: Complemental strand, 31601623 - 31601491
Alignment:
Q  212 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaa 311  Q
    |||||||||||| ||| || |||| |  || ||||||||||||||||||||||||     || | |||||||||| |||| |  || || ||| ||||||    
T  31601623 gagtaaattacacttccctccccttaaagatgcttgaattacactcccctcccctt----ttatattaaaatatatatttctctcctttaaaaagtaaaa 31601528  T
Q  312 tttatactcccctcccgtatgagatacttgaattaca 348  Q
    |||||| ||||||||| ||| |||| |||||||||||    
T  31601527 tttatattcccctcccctataagatgcttgaattaca 31601491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 351
Target Start/End: Complemental strand, 36737497 - 36737393
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    |||||||||||||||||||||    |||||| |||||||||||||| ||    |||||||||  ||||||| ||| ||||||||| ||| ||||  ||||    
T  36737497 gcttgaattacactcccctcc----cctcttatgttaaaatatacacttccctcccttgaaaaataaaattaatattcccctcccctataagatgattga 36737402  T
Q  343 attacaacc 351  Q
    |||||||||    
T  36737401 attacaacc 36737393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 351
Target Start/End: Original strand, 40026975 - 40027058
Alignment:
Q  268 cctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||| |||||||||||||| |||   ||||||||| | |||| ||||||||||||||| ||  |||| ||||||||||||||    
T  40026975 cctcttatgttaaaatatacactttcatcccttgaaaagaaaaaattatactcccctcccctagaagatgcttgaattacaacc 40027058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 211 - 349
Target Start/End: Complemental strand, 1406316 - 1406182
Alignment:
Q  211 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaa 310  Q
    ||||||||||||| | | || | ||||| |||||||||||||||||| | || ||||    || |||||||||||||| | |   || ||||||  ||||    
T  1406316 agagtaaattacactccccttctctaagagaagcttgaattacactctcatctcctc----ttatgttaaaatatacactctcctccattgaaaaataaa 1406221  T
Q  311 atttatactcccctcccgtatgagatacttgaattacaa 349  Q
    ||||||||||||||| | ||| |||| ||||||||||||    
T  1406220 atttatactcccctcgcctataagatgcttgaattacaa 1406182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 351
Target Start/End: Complemental strand, 15175954 - 15175816
Alignment:
Q  209 taagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggta 308  Q
    ||||||||||||||| | | || ||||||| || ||||||||||||||||||||    || |||| ||||||||||||||  | |  | ||||||| |||    
T  15175954 taagagtaaattacactcccctcccctaagagatgcttgaattacactcccctc----ccttcttatgttaaaatatacacatctctctcttgaaaagta 15175859  T
Q  309 aaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||| ||||||||  |||| | | |||| |||||||| |||||    
T  15175858 aaatctatactcctatcccctttcagatgcttgaattgcaacc 15175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 351
Target Start/End: Complemental strand, 5138993 - 5138909
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||| |||||||||||||| | |   |||| ||||  ||||||||||||||| ||||| ||| |||| ||||||||||||||    
T  5138993 ccctcttatgttaaaatatacactctcctccctcgaaaaataaaatttatactccactcccctataagatgcttgaattacaacc 5138909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 19409204 - 19409152
Alignment:
Q  296 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattaca 348  Q
    ||||||||| |||||||||||||||||||||| ||| |||| ||| |||||||    
T  19409204 cccttgaaaagtaaaatttatactcccctcccctataagatgcttaaattaca 19409152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 351
Target Start/End: Original strand, 20570204 - 20570288
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||| ||||||||||||||||     |||||||||  ||||||| ||||||||||| | ||| |||| ||||||||||||||    
T  20570204 ccctcttatgttaaaatatacattcccctcccttgaaaaataaaattaatactcccctctcctataagatgcttgaattacaacc 20570288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 351
Target Start/End: Original strand, 36742167 - 36742251
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||| |||||||||||||| |     |||||||||  ||||||||| ||||||||||| ||| |||| ||||||||||||||    
T  36742167 ccctcttatgttaaaatatacactaccctcccttgaaaaataaaatttacactcccctcccttataagatgcttgaattacaacc 36742251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 358
Target Start/End: Complemental strand, 38955581 - 38955497
Alignment:
Q  275 tgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac-ctctccct 358  Q
    ||||||||||||||||  |  ||||||||| ||||||||||||||||| ||||  || ||||  |||||||||||| ||||||||    
T  38955581 tgttaaaatatacattcctctcccttgaaaagtaaaatttatactcccttccctcataagatgtttgaattacaacactctccct 38955497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 20691211 - 20691253
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  20691211 taaaatttatactcccctcccatataagatgcttgaattacaa 20691253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 2074796 - 2074739
Alignment:
Q  210 aagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctc 267  Q
    |||||||||||| | | | || ||||||| ||| ||||||||||||||||||||||||    
T  2074796 aagagtaaattatactccccttccctaagagaaacttgaattacactcccctcccctc 2074739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 18338187 - 18338138
Alignment:
Q  296 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaatt 345  Q
    ||||||||| |||||| ||||||||||||||| ||| |||| ||||||||    
T  18338187 cccttgaaaagtaaaagttatactcccctcccctataagatgcttgaatt 18338138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 318
Target Start/End: Complemental strand, 31886432 - 31886358
Alignment:
Q  240 gaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatac 318  Q
    |||| |||||||||||||||||||||||    ||| ||||||||||||||||||  || ||||||  ||||| ||||||    
T  31886432 gaagtttgaattacactcccctcccctc----ttgagttaaaatatacatttttctccgttgaaaaataaaacttatac 31886358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 351
Target Start/End: Original strand, 40956840 - 40956885
Alignment:
Q  306 gtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||||||||||||||||||  || |||| ||||||||||||||    
T  40956840 gtaaaatttatactcccctccctcataagatgcttgaattacaacc 40956885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 350
Target Start/End: Complemental strand, 6123923 - 6123871
Alignment:
Q  298 cttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac 350  Q
    ||||||| ||||||| ||||||||| |||| |||  |||||||||||||||||    
T  6123923 cttgaaaagtaaaatgtatactcccatcccctatatgatacttgaattacaac 6123871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 15175331 - 15175375
Alignment:
Q  240 gaagcttgaattacactcccctcccct-ccctcttgtgttaaaat 283  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||||    
T  15175331 gaagcttgaattacattcccctcccctcccctcttttgttaaaat 15175375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 351
Target Start/End: Original strand, 24624913 - 24624957
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||||||||||||||| | ||| |||| ||||||||||||||    
T  24624913 taaaatttatactcccctctcttataagatgcttgaattacaacc 24624957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 8e-25; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 212 - 351
Target Start/End: Complemental strand, 49765208 - 49765073
Alignment:
Q  212 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaa 311  Q
    |||||||||||| |||||| |||  |  || | |||||||||||||||||||||||    || ||||||||||||||||     ||||||||||||||||    
T  49765208 gagtaaattacacttctctccccgcaaagatgtttgaattacactcccctcccctc----ttatgttaaaatatacattcccctcccttgaaaggtaaaa 49765113  T
Q  312 tttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  49765112 tttatactcccctcccctataagatacttgaattacaacc 49765073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 212 - 349
Target Start/End: Original strand, 11397584 - 11397717
Alignment:
Q  212 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaa 311  Q
    |||||||||||| |||  | ||||||| ||||||||||||||||| ||||||||||    || |||||||||||||| | |   ||||||||| ||||||    
T  11397584 gagtaaattacacttccttcccctaagagaagcttgaattacacttccctcccctc----ttatgttaaaatatacactctcatcccttgaaaagtaaaa 11397679  T
Q  312 tttatactcccctcccgtatgagatacttgaattacaa 349  Q
    |||||||||| ||||| ||| |||| ||||||||||||    
T  11397680 tttatactccactcccctataagatgcttgaattacaa 11397717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 349
Target Start/End: Original strand, 54403587 - 54403689
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    |||||||||||||||||||||||||    || |||||||||||||| ||    ||||||||| |||||| ||||||||||||||| ||| | ||||||||    
T  54403587 gcttgaattacactcccctcccctc----ttatgttaaaatatacacttccctcccttgaaaagtaaaagttatactcccctcccttataaaatacttga 54403682  T
Q  343 attacaa 349  Q
    |||||||    
T  54403683 attacaa 54403689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 351
Target Start/End: Complemental strand, 40036477 - 40036340
Alignment:
Q  210 aagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaa 309  Q
    |||||||||||||| |   ||||||| |  || |||||||||||| ||||||||||||    || |||||||||||||| |     |||||| || ||||    
T  40036477 aagagtaaattacactctcctaccctcaaagatgcttgaattacattcccctcccctc----ttatgttaaaatatacactcccctcccttgcaaagtaa 40036382  T
Q  310 aatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||||||||||||||| ||| |||||||||||||||||||    
T  40036381 aatttatactcccctcccctataagatacttgaattacaacc 40036340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 361
Target Start/End: Original strand, 1262425 - 1262540
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    |||||||||||||||||||||||||    || |||||||||||||| | |   | ||||||| |||||||||||||||| ||||| ||| |||| ||||     
T  1262425 gcttgaattacactcccctcccctc----ttatgttaaaatatacactctcctctcttgaaaagtaaaatttatactcctctcccctataagatgcttgc 1262520  T
Q  343 attacaacct-ctccctgaa 361  Q
    |||||||||| |||||||||    
T  1262521 attacaacctcctccctgaa 1262540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 346
Target Start/End: Original strand, 13623172 - 13623301
Alignment:
Q  212 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaa 311  Q
    |||||||||||| ||| || |||| |  || |||||||||||||| |||||    ||||||| |||||||||||||| ||    |||||||||  |||||    
T  13623172 gagtaaattacacttcactcccctcaaagatgcttgaattacacttccctc----ccctcttatgttaaaatatacacttccctcccttgaaaattaaaa 13623267  T
Q  312 tttatactcccctcccgtatgagatacttgaatta 346  Q
    ||||||| |||||||| ||| ||||||||||||||    
T  13623268 tttatac-cccctcccttataagatacttgaatta 13623301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 350
Target Start/End: Original strand, 25480524 - 25480658
Alignment:
Q  212 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaa 311  Q
    |||||||||||| || ||| |||| |  || |||||||||| ||||||||||| ||    || |||||||||||||| |||   |||||| || ||||||    
T  25480524 gagtaaattacacttttcttcccttaaagatgcttgaattatactcccctcccatc----ttatgttaaaatatacactttcctcccttgtaaagtaaaa 25480619  T
Q  312 tttatactcccctcccgtatgagatacttgaattacaac 350  Q
    ||||||| |||||||| ||| |||| ||| |||||||||    
T  25480620 tttatacacccctcccctataagatgcttaaattacaac 25480658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 351
Target Start/End: Original strand, 27394299 - 27394383
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||| ||||||||||||||||     ||||| ||| ||||||||||||||| |||| | ||| |||| ||||||||||||||    
T  27394299 ccctcttatgttaaaatatacattcccctcccttaaaaagtaaaatttatactctcctctcttataagatgcttgaattacaacc 27394383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 348
Target Start/End: Complemental strand, 48842058 - 48841970
Alignment:
Q  260 ctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattaca 348  Q
    ||||||||||| || |||||||||||||| |     ||||| ||| |||||||||||| ||||||||| ||| |||| |||||||||||    
T  48842058 ctcccctcccttttatgttaaaatatacactaccatcccttaaaaagtaaaatttatattcccctcccctataagatgcttgaattaca 48841970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 6296744 - 6296681
Alignment:
Q  296 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac-ctctccct 358  Q
    ||||| ||| |||||||||||||||||||||| ||| ||||| ||||||| |||| ||||||||    
T  6296744 cccttcaaaagtaaaatttatactcccctcccttataagatatttgaattgcaactctctccct 6296681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 351
Target Start/End: Original strand, 14600405 - 14600509
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    ||||||||||||||||||||||| |    || |||||||||||||| ||    || |||||| ||||| || ||||||||||||| | |||||| |||||    
T  14600405 gcttgaattacactcccctccccac----ttatgttaaaatatacacttcactcctttgaaaagtaaatttgatactcccctcccttgtgagatgcttga 14600500  T
Q  343 attacaacc 351  Q
    ||| |||||    
T  14600501 atttcaacc 14600509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 351
Target Start/End: Original strand, 48223552 - 48223692
Alignment:
Q  207 tttaagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaagg 306  Q
    ||||||||||||||||| | | ||  |||||| || ||||||||||||||  ||||    || |||| |||||||||||||| || |  |||| |||| |    
T  48223552 tttaagagtaaattacactcccctcgcctaagagatgcttgaattacactttcctc----ccttcttatgttaaaatatacacttctctccctcgaaaag 48223647  T
Q  307 taaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||| ||||||||| |||| | | |||| |||||||| |||||    
T  48223648 taaaatctatactcccatcccctttcagatgcttgaattgcaacc 48223692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 347
Target Start/End: Complemental strand, 3541110 - 3541032
Alignment:
Q  269 ctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattac 347  Q
    ||||| ||||||||||||||||     ||| ||||| |||||||||||||| ||||||| ||| |||| ||||||||||    
T  3541110 ctcttatgttaaaatatacattcccctcccatgaaaagtaaaatttatactaccctcccctataagatgcttgaattac 3541032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 11056536 - 11056494
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  11056536 taaaatttatactcccctcccttataagatgcttgaattacaa 11056494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 350
Target Start/End: Original strand, 30127669 - 30127723
Alignment:
Q  296 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac 350  Q
    ||||| ||| |||||||||||||||||||||  ||||||||  ||||||||||||    
T  30127669 cccttaaaaagtaaaatttatactcccctcctctatgagatgtttgaattacaac 30127723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 37183739 - 37183697
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    |||||||||||||||||| || ||| |||||||||||||||||    
T  37183739 taaaatttatactccccttccttataagatacttgaattacaa 37183697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 351
Target Start/End: Complemental strand, 17764990 - 17764905
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccc-tcccgtatgagatacttgaattacaacc 351  Q
    ||||||| |||||||||||||| |     ||||||||| |||| ||||||||||||| |||| ||| |||| ||||||||||||||    
T  17764990 ccctcttatgttaaaatatacactcccctcccttgaaaagtaagatttatactccccctcccctataagatgcttgaattacaacc 17764905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 351
Target Start/End: Complemental strand, 19066310 - 19066225
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccc-tcccgtatgagatacttgaattacaacc 351  Q
    ||||||| |||||||||||||| |     ||||||||| |||| ||||||||||||| |||| ||| |||| ||||||||||||||    
T  19066310 ccctcttatgttaaaatatacactcccctcccttgaaaagtaagatttatactccccctcccctataagatgcttgaattacaacc 19066225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 41865075 - 41865116
Alignment:
Q  308 aaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  41865075 aaaatttatactcccctcccttataagatgcttgaattacaa 41865116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 353
Target Start/End: Complemental strand, 44500091 - 44499986
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    |||||||||||||||||||||    |||||| |||||||||||||| ||    | ||||||| |||||| ||||| || | |||| ||| |||| |||||    
T  44500091 gcttgaattacactcccctcc----cctcttatgttaaaatatacacttccctctcttgaaaagtaaaa-ttataatcacatcccttataagatgcttga 44499997  T
Q  343 attacaacctc 353  Q
    |||||||||||    
T  44499996 attacaacctc 44499986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 1263139 - 1263083
Alignment:
Q  211 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctc 267  Q
    ||||||||||||||| | || |||| |  || |||||||||||||||||||||||||    
T  1263139 agagtaaattacattcccctcccctcaaagatgcttgaattacactcccctcccctc 1263083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 202 - 266
Target Start/End: Complemental strand, 5984998 - 5984934
Alignment:
Q  202 aaatatttaagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccct 266  Q
    ||||| |||||||||||||||| | | || |||| |  || ||||||||||||||||||||||||    
T  5984998 aaataattaagagtaaattacactcccctcccctcaaagatgcttgaattacactcccctcccct 5984934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 351
Target Start/End: Original strand, 27255313 - 27255418
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatt-tatactcccctcccgtatgagatacttg 341  Q
    ||||||||||||||| ||||    ||||||| |||||||||||||| |  |  ||||||||| ||||| ||  ||||||||||||| |||||||  ||||    
T  27255313 gcttgaattacactctcctc----ccctcttatgttaaaatatacactcatctcccttgaaaagtaaagttgaatactcccctcccttatgagaagcttg 27255408  T
Q  342 aattacaacc 351  Q
    |||| |||||    
T  27255409 aatttcaacc 27255418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 350
Target Start/End: Complemental strand, 30605392 - 30605291
Alignment:
Q  245 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 344  Q
    ||||||||||||||||||| |||    || |||||||||||||| ||    | ||||||  ||||||| || ||||||||||| ||| |||| |||||||    
T  30605392 ttgaattacactcccctccactc----ttatgttaaaatatacacttccctctcttgaatagtaaaatctacactcccctcccctataagatgcttgaat 30605297  T
Q  345 tacaac 350  Q
    ||||||    
T  30605296 tacaac 30605291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 351
Target Start/End: Original strand, 33978635 - 33978687
Alignment:
Q  299 ttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||| ||||||||||||||| |||||| ||| ||||  |||||||||||||    
T  33978635 ttgaaaagtaaaatttatactctcctcccctataagatgtttgaattacaacc 33978687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 351
Target Start/End: Original strand, 49080034 - 49080090
Alignment:
Q  296 cccttgaaaggtaaaatttatact-cccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||||| |||| ||||||||| |||||||| ||| |||| ||||||||||||||    
T  49080034 cccttgaaaagtaagatttatactccccctcccctataagatgcttgaattacaacc 49080090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 267
Target Start/End: Complemental strand, 54404184 - 54404152
Alignment:
Q  235 taagggaagcttgaattacactcccctcccctc 267  Q
    |||| ||||||||||||||||||||||||||||    
T  54404184 taagagaagcttgaattacactcccctcccctc 54404152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 3e-24; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 211 - 351
Target Start/End: Original strand, 31709055 - 31709196
Alignment:
Q  211 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccct-ccctcttgtgttaaaatatacattttttccccttgaaaggtaa 309  Q
    ||||||||||||| ||| || ||||||| || |||||||||||||||||||||||| ||||||| |||||||||||||| ||     |||||||| ||||    
T  31709055 agagtaaattacacttccctcccctaagagatgcttgaattacactcccctcccctcccctcttatgttaaaatatacacttcccttccttgaaaagtaa 31709154  T
Q  310 aatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||||| |||||| || | |||||| |||||||| |||||    
T  31709155 aatttatattccccttccatttgagatgcttgaattgcaacc 31709196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 211 - 350
Target Start/End: Complemental strand, 22298331 - 22298196
Alignment:
Q  211 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaa 310  Q
    ||||||||||||| | ||||   ||||| ||||||||||||||||||| ||||||||    || |||||||||||||| | ||  |||||||||  ||||    
T  22298331 agagtaaattacactcctctcttctaagagaagcttgaattacactcctctcccctc----ttatgttaaaatatacactcttctcccttgaaaaataaa 22298236  T
Q  311 atttatactcccctcccgtatgagatacttgaattacaac 350  Q
    ||||||||||||||| | ||| ||||||||||||||||||    
T  22298235 atttatactcccctcgcctataagatacttgaattacaac 22298196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 243 - 351
Target Start/End: Complemental strand, 11796858 - 11796755
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    |||||||||||||||||||||||||    ||  ||||||||||||||||   | |||||||| |||||||||||||||||||||| ||| |||| |||||    
T  11796858 gcttgaattacactcccctcccctc----ttaagttaaaatatacatttcc-ctccttgaaaagtaaaatttatactcccctcccctataagatgcttga 11796764  T
Q  343 attacaacc 351  Q
    |||||||||    
T  11796763 attacaacc 11796755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 245 - 351
Target Start/End: Complemental strand, 34173760 - 34173658
Alignment:
Q  245 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 344  Q
    |||||||||||||||||||||||    || ||||||||||||||||     ||||||||| |||||||||||| ||||||||| ||| |||| |||||||    
T  34173760 ttgaattacactcccctcccctc----ttatgttaaaatatacattcccctcccttgaaaagtaaaatttatattcccctcccctataagatgcttgaat 34173665  T
Q  345 tacaacc 351  Q
    |||||||    
T  34173664 tacaacc 34173658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 351
Target Start/End: Original strand, 5790035 - 5790137
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    |||||||||||||||||||||      |||| ||||||||||||||||  |  |||||||||  ||||||||||||||||||||| ||| |||| |||||    
T  5790035 gcttgaattacactcccctcc------tcttatgttaaaatatacattcctcacccttgaaaaataaaatttatactcccctcccttataagatgcttga 5790128  T
Q  343 attacaacc 351  Q
    ||| |||||    
T  5790129 attgcaacc 5790137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 320
Target Start/End: Complemental strand, 5475182 - 5475109
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactc 320  Q
    ||||||||||||||| |||||||||    || |||||||||||||||||||| ||| ||||| |||||||||||||||    
T  5475182 gcttgaattacactctcctcccctc----ttatgttaaaatatacatttttttcccctgaaaagtaaaatttatactc 5475109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 353
Target Start/End: Complemental strand, 37199646 - 37199542
Alignment:
Q  245 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 344  Q
    |||||||||||||||||||||||    || |||||||||||||| |     ||||||||| |||||||||||||||||||||| ||| |||| || ||||    
T  37199646 ttgaattacactcccctcccctc----ttatgttaaaatatacactcccctcccttgaaaagtaaaatttatactcccctcccctataagatgctcgaat 37199551  T
Q  345 tacaacctc 353  Q
    |||| ||||    
T  37199550 tacatcctc 37199542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 266 - 348
Target Start/End: Complemental strand, 3045628 - 3045546
Alignment:
Q  266 tccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattaca 348  Q
    |||||||| |||||||||||||| ||    | ||||||| |||||||||||||||||||||| ||| |||| |||||||||||    
T  3045628 tccctcttatgttaaaatatacacttccctctcttgaaaagtaaaatttatactcccctcccctataagatgcttgaattaca 3045546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 41077569 - 41077625
Alignment:
Q  297 ccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 353  Q
    |||| ||| |||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  41077569 ccttaaaaagtaaaatttatactcccctcccttataagatgcttgaattacaacctc 41077625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 351
Target Start/End: Original strand, 31597299 - 31597354
Alignment:
Q  296 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||||| |||||||||| ||||||||||| ||| |||| ||||||||||||||    
T  31597299 cccttgaaaagtaaaatttacactcccctcccctataagatgcttgaattacaacc 31597354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 351
Target Start/End: Original strand, 33146060 - 33146164
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    ||||||||| |||||||||||||||    || |||||||||||||| |     ||||||||| | ||||||||||| |||||||| ||| |||| |||||    
T  33146060 gcttgaattgcactcccctcccctc----ttatgttaaaatatacactcccctcccttgaaaaggaaaatttatacccccctcccctataagatgcttga 33146155  T
Q  343 attacaacc 351  Q
    |||||||||    
T  33146156 attacaacc 33146164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 354
Target Start/End: Complemental strand, 37009688 - 37009601
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctct 354  Q
    ||||||| |||||||||||||| |     ||||||||| |||||||||| ||||||||||| ||| ||||  ||||||||||||||||    
T  37009688 ccctcttatgttaaaatatacactcccctcccttgaaaagtaaaatttacactcccctcccctataagatgtttgaattacaacctct 37009601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 351
Target Start/End: Complemental strand, 43439826 - 43439743
Alignment:
Q  268 cctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||| |||||||||||||| | |   |||||||||  |||||||||||||| |||||| ||| |||| ||||||||||||||    
T  43439826 cctcttatgttaaaatatacactctcctcccttgaaaaataaaatttatactctcctcccttataagatgcttgaattacaacc 43439743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 4437977 - 4437923
Alignment:
Q  297 ccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||| || |||||||||||||||||||||| ||| |||| ||||||||||||||    
T  4437977 ccttgtaaagtaaaatttatactcccctcccttataagatgcttgaattacaacc 4437923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 350
Target Start/End: Original strand, 40020157 - 40020227
Alignment:
Q  280 aaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac 350  Q
    ||||||||||||||| |||||||||  |||||||||||||||||| || | ||||||  ||||||| ||||    
T  40020157 aaatatacatttttttcccttgaaaaataaaatttatactccccttccctttgagatgtttgaattgcaac 40020227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 245 - 351
Target Start/End: Original strand, 28167567 - 28167669
Alignment:
Q  245 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 344  Q
    |||||||||||||||||    |||||||| |||||||||||||| | |   ||||| ||| ||||| |||||||| | ||||| ||| |||| |||||||    
T  28167567 ttgaattacactcccct----tccctcttatgttaaaatatacactctcctcccttaaaaagtaaagtttatacttctctcccttataagatgcttgaat 28167662  T
Q  345 tacaacc 351  Q
    |||||||    
T  28167663 tacaacc 28167669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 348
Target Start/End: Original strand, 7939352 - 7939453
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    ||||||||||||||| |||    |||||||| |||||||||||||| ||    ||||||||| ||||||||||||||| |||  | ||| |||| |||||    
T  7939352 gcttgaattacactctcct----tccctcttatgttaaaatatacacttacctcccttgaaaagtaaaatttatactctcctttcctataagatgcttga 7939447  T
Q  343 attaca 348  Q
    ||||||    
T  7939448 attaca 7939453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 351
Target Start/End: Complemental strand, 17829718 - 17829663
Alignment:
Q  296 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||||||  ||||||||| ||||||||||| ||| |||| ||||||||||||||    
T  17829718 cccttgaaaaataaaatttacactcccctcccttataagatgcttgaattacaacc 17829663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 351
Target Start/End: Original strand, 37329774 - 37329829
Alignment:
Q  296 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||||||  ||||||||||||| ||||||| ||| |||| ||||||||||||||    
T  37329774 cccttgaaaaataaaatttatactaccctcccttataagatgcttgaattacaacc 37329829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 551923 - 551965
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  551923 taaaatttatactcccctcccttataagatgcttgaattacaa 551965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 353
Target Start/End: Complemental strand, 11564497 - 11564411
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 353  Q
    ||||||| |||||||||||||| | |   ||||||||| |||||| |||||||| | |||| ||| |||| ||||||||||| ||||    
T  11564497 ccctcttatgttaaaatatacactctcctcccttgaaaagtaaaacttatactctcatcccctataagatgcttgaattacatcctc 11564411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 353
Target Start/End: Original strand, 11942100 - 11942146
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattacaacctc 353  Q
    ||||||||| ||||||||||| ||| |||| ||||||||||||||||    
T  11942100 taaaatttacactcccctcccttataagatgcttgaattacaacctc 11942146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 16110580 - 16110622
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  16110580 taaaatttatactcccctcccttataagatgcttgaattacaa 16110622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 20893305 - 20893347
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  20893305 taaaatttatactcccctcccttataagatgcttgaattacaa 20893347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 354
Target Start/End: Complemental strand, 22607031 - 22606924
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    ||||||||||||||||||||  |||    || |||||||||||||| | | | |||| |||| |||||| ||||||||||||| | ||| |||| |||      
T  22607031 gcttgaattacactcccctcttctc----ttatgttaaaatatacactctcttccctagaaaagtaaaacttatactcccctcgcctatcagatgcttat 22606936  T
Q  343 attacaacctct 354  Q
    ||||||||||||    
T  22606935 attacaacctct 22606924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 348
Target Start/End: Complemental strand, 40769416 - 40769318
Alignment:
Q  245 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 344  Q
    ||||||||||||||||||     |||||| |||||||||||||| | |   ||||||||| ||||||||||||||  |||||| ||| |||| |||||||    
T  40769416 ttgaattacactcccctc----acctcttatgttaaaatatacactctcctcccttgaaaagtaaaatttatact-acctcccctataagatgcttgaat 40769322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 351
Target Start/End: Original strand, 32023023 - 32023100
Alignment:
Q  275 tgttaaaatatacattttttccccttgaaaggtaaaatttatact-cccctcccgtatgagatacttgaattacaacc 351  Q
    |||||||||||||| ||    |||||| || |||||||||||||| |||||||| ||| |||| ||||||||||||||    
T  32023023 tgttaaaatatacacttccctcccttgcaaagtaaaatttatactccccctcccttataagatgcttgaattacaacc 32023100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 13874012 - 13873932
Alignment:
Q  269 ctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    ||||| |||||||||||||| |  |  |||||||||  ||||||| ||||||||||||| ||| |||| | ||||||||||    
T  13874012 ctcttatgttaaaatatacactcatctcccttgaaaaataaaattaatactcccctcccttataagatgcatgaattacaa 13873932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 14014137 - 14014057
Alignment:
Q  269 ctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    ||||| |||||||||||||| |  |  |||||||||  ||||||| ||||||||||||| ||| |||| | ||||||||||    
T  14014137 ctcttatgttaaaatatacactcatctcccttgaaaaataaaattaatactcccctcccttataagatgcatgaattacaa 14014057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 37198921 - 37198973
Alignment:
Q  210 aagagtaaattacatttctctaccctaagggaagcttgaattacactcccctc 262  Q
    |||||||||||||||||| || |||| |  || ||||||||||||||||||||    
T  37198921 aagagtaaattacatttccctcccctcaaagatgcttgaattacactcccctc 37198973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 358
Target Start/End: Complemental strand, 43657569 - 43657517
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattac-aacctctccct 358  Q
    ||||||||||||||||||||| ||| |||| ||||| |||| |||||||||||    
T  43657569 taaaatttatactcccctcccttataagatgcttgacttacaaacctctccct 43657517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 240 - 353
Target Start/End: Complemental strand, 49129727 - 49129618
Alignment:
Q  240 gaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatact 339  Q
    |||| |||||||||||||||||||||||    || |||||||||||||| | ||  |||||||||  ||||||||||||||||||||| ||| |||| ||    
T  49129727 gaagtttgaattacactcccctcccctc----ttatgttaaaatatacaatcttctcccttgaaaaataaaatttatactcccctcccttataagatgct 49129632  T
Q  340 tgaattacaacctc 353  Q
    ||||||||||||||    
T  49129631 tgaattacaacctc 49129618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 211 - 351
Target Start/End: Original strand, 45737298 - 45737434
Alignment:
Q  211 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaa 310  Q
    ||||||||||||| | |||| |||| |  || |||||||||||||||||||||||||    || |||||||||||||| | |   |||||||||  ||||    
T  45737298 agagtaaattacactcctctcccctcaaagatgcttgaattacactcccctcccctc----ttatgttaaaatatacactctcctcccttgaaaaataaa 45737393  T
Q  311 atttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||||||||||||| ||| |||| ||||||||||||||    
T  45737394 atttatactcccctcccttataagattcttgaattacaacc 45737434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 212 - 351
Target Start/End: Original strand, 27225670 - 27225805
Alignment:
Q  212 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaa 311  Q
    |||||||||||| | | || ||||||| || ||||||||||||||| |||||||||    || |||||||||||||| ||    ||||||||| ||||||    
T  27225670 gagtaaattacaatcccctcccctaagagatgcttgaattacactctcctcccctc----ttatgttaaaatatacacttccctcccttgaaaagtaaaa 27225765  T
Q  312 tttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||||||||||||| | |||||| |||||||| |||||    
T  27225766 tttatactcccctcccatttgagatgcttgaattgcaacc 27225805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 204 - 348
Target Start/End: Original strand, 45737986 - 45738126
Alignment:
Q  204 atatttaagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaa 303  Q
    |||||| ||||||||||||| | | || |||| |  || ||||||||||||||| |||||||||    || |||||||||||||| ||    ||||| ||    
T  45737986 atattttagagtaaattacactcccctcccctcaaagatgcttgaattacactctcctcccctc----ttatgttaaaatatacacttccctcccttaaa 45738081  T
Q  304 aggtaaaatttatactcccctcccgtatgagatacttgaattaca 348  Q
    | |||||||||||||||||||||| ||| |||| |||||||||||    
T  45738082 aagtaaaatttatactcccctcccctataagatgcttgaattaca 45738126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 350
Target Start/End: Complemental strand, 10012511 - 10012397
Alignment:
Q  232 ccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtat 331  Q
    ||||||| |||||||||||||| || || ||    ||||||| |||||||||||||| ||    ||||||||  |||||||||||||||||||||| |||    
T  10012511 ccctaagagaagcttgaattacccttccatc----ccctcttatgttaaaatatacacttccctcccttgaacagtaaaatttatactcccctcccttat 10012416  T
Q  332 gagatacttgaattacaac 350  Q
     |||| |||||||||||||    
T  10012415 aagatgcttgaattacaac 10012397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 245 - 350
Target Start/End: Complemental strand, 1114929 - 1114828
Alignment:
Q  245 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 344  Q
    |||||||||||||||||||||||    || |||||||||||||| ||||  |||||||||  |||||||||||||| | |||  ||| |||| |||||||    
T  1114929 ttgaattacactcccctcccctc----ttatgttaaaatatacacttttcacccttgaaaaataaaatttatactctcatcctttataagatgcttgaat 1114834  T
Q  345 tacaac 350  Q
    ||||||    
T  1114833 tacaac 1114828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 210 - 345
Target Start/End: Original strand, 16536364 - 16536495
Alignment:
Q  210 aagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaa 309  Q
    |||||||||||||| | | || |||| |  || |||||||||||||||||||||||||    || |||||||||||||| |     ||||||||| ||||    
T  16536364 aagagtaaattacactcccctcccctcaaagatgcttgaattacactcccctcccctc----ttatgttaaaatatacactcccctcccttgaaaagtaa 16536459  T
Q  310 aatttatactcccctcccgtatgagatacttgaatt 345  Q
    | || ||||||||||||| |||||||| ||||||||    
T  16536460 atttgatactcccctcccttatgagatgcttgaatt 16536495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 267 - 353
Target Start/End: Complemental strand, 28198152 - 28198066
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 353  Q
    ||||||| |||| ||||||||| | |   |||||||||  ||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  28198152 ccctcttatgtttaaatatacactctcctcccttgaaaaataaaatttatactcccctcccttataagatgcttgaattacaacctc 28198066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 351
Target Start/End: Complemental strand, 33126879 - 33126798
Alignment:
Q  270 tcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||| |||||||||||||| |||   ||||||||| ||||||||||||||||| |||| | |||||| |||||||| |||||    
T  33126879 tcttatgttaaaatatacactttcctcccttgaaaagtaaaatttatactcccatcccctttgagatgcttgaattgcaacc 33126798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 4667594 - 4667518
Alignment:
Q  245 ttgaattacactcccctcccctc-cctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactc 320  Q
    ||||||||||||| | ||||||| |||||| |||||||||||||| | ||  ||||||||| |||||||||||||||    
T  4667594 ttgaattacactctcatcccctctcctcttatgttaaaatatacactcttctcccttgaaaagtaaaatttatactc 4667518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 351
Target Start/End: Original strand, 25990422 - 25990558
Alignment:
Q  211 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaa 310  Q
    ||||||||||||||| |||| || | |  ||  ||||||||||||| ||||||||||    || |||||||||||||||| |    ||||||||  ||||    
T  25990422 agagtaaattacattcctcttccatcaaagatacttgaattacacttccctcccctc----ttatgttaaaatatacattctccttccttgaaaaataaa 25990517  T
Q  311 atttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||| | ||||||| ||| |||| ||||||||||||||    
T  25990518 atttataattccctcccttataagatgcttgaattacaacc 25990558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 346
Target Start/End: Original strand, 36604719 - 36604851
Alignment:
Q  210 aagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaa 309  Q
    |||||||||||||| | | || |||| |  || |||||||||||||||| ||    |||||||| |||||||||||||| ||    || |||||| ||||    
T  36604719 aagagtaaattacactcccctcccctcaaagatgcttgaattacactcctct----tccctcttatgttaaaatatacacttccctcctttgaaaagtaa 36604814  T
Q  310 aatttatactcccctcccgtatgagatacttgaatta 346  Q
    ||||||||||| |||||| ||| |||| |||||||||    
T  36604815 aatttatactctcctcccctataagatgcttgaatta 36604851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 267
Target Start/End: Complemental strand, 9998085 - 9998023
Alignment:
Q  205 tatttaagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctc 267  Q
    ||||||||| ||||||||||| | || ||||||| |||||||||||||| || ||||||||||    
T  9998085 tatttaagattaaattacattcccctcccctaagagaagcttgaattacccttccctcccctc 9998023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 351
Target Start/End: Complemental strand, 7307664 - 7307524
Alignment:
Q  209 taagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccc-tcttgtgttaaaatatacattttttccccttgaaaggt 307  Q
    ||||| ||||||||| | | || ||||||| ||  |||||||||||| |   ||||||||| |||| |||||||||||| | ||    ||||||||| ||    
T  7307664 taagaataaattacactcccctcccctaagagatacttgaattacacac---tcccctcccctcttatgttaaaatatataattccctcccttgaaaagt 7307568  T
Q  308 aaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
     ||||||||||||||||||| | |||||| |||||||| |||||    
T  7307567 taaatttatactcccctcccctttgagatgcttgaattgcaacc 7307524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 349
Target Start/End: Original strand, 18406555 - 18406657
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    ||||||||||||||||||||| |||    || |||||||||||||| |     |||||||||  ||||||||| ||||||||||| ||| |||| |||||    
T  18406555 gcttgaattacactcccctcctctc----ttatgttaaaatatacactaccctcccttgaaaaataaaatttacactcccctcccttataagatgcttga 18406650  T
Q  343 attacaa 349  Q
    |||||||    
T  18406651 attacaa 18406657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 245 - 351
Target Start/End: Original strand, 19071739 - 19071840
Alignment:
Q  245 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 344  Q
    ||||||||||||| |||||||||    || |||||||||||||| |   |||| | |||| |||||||||||||||||||||  ||| |||| |||||||    
T  19071739 ttgaattacactctcctcccctc----ttatgttaaaatatacactccctcccgt-gaaaagtaaaatttatactcccctcctctataagatgcttgaat 19071833  T
Q  345 tacaacc 351  Q
    |||||||    
T  19071834 tacaacc 19071840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 245 - 351
Target Start/End: Original strand, 19119629 - 19119730
Alignment:
Q  245 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 344  Q
    ||||||||||||| |||||||||    || |||||||||||||| |   |||| | |||| |||||||||||||||||||||  ||| |||| |||||||    
T  19119629 ttgaattacactctcctcccctc----ttatgttaaaatatacactccctcccgt-gaaaagtaaaatttatactcccctcctctataagatgcttgaat 19119723  T
Q  345 tacaacc 351  Q
    |||||||    
T  19119724 tacaacc 19119730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 349
Target Start/End: Original strand, 50143379 - 50143512
Alignment:
Q  212 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaa 311  Q
    |||||||||||| |  ||| |||| || || | ||||||||||||||||||    ||||||| ||||||||||||||||     |||||||||  || ||    
T  50143379 gagtaaattacactattcttccctcagagatgtttgaattacactcccctc----ccctcttatgttaaaatatacattcccctcccttgaaaaatataa 50143474  T
Q  312 tttatactcccctcccgtatgagatacttgaattacaa 349  Q
    || ||| ||||||||| ||| |||| ||||||||||||    
T  50143475 ttaataatcccctcccctataagatgcttgaattacaa 50143512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 351
Target Start/End: Original strand, 27930843 - 27930898
Alignment:
Q  296 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||| || |||||||||||||||| ||||| ||| |||| ||||||||||||||    
T  27930843 cccttgtaaagtaaaatttatactcctctcccttataagatgcttgaattacaacc 27930898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 350
Target Start/End: Complemental strand, 29778001 - 29777950
Alignment:
Q  299 ttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac 350  Q
    |||||| |||||||||||||||||||||| ||| ||||  ||||||||||||    
T  29778001 ttgaaaagtaaaatttatactcccctcccttataagatgtttgaattacaac 29777950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 351
Target Start/End: Original strand, 44648666 - 44648749
Alignment:
Q  268 cctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||| |||||||||||||| |||   |||||| || ||||||| || |||||||| || ||| |||| ||||||||||||||    
T  44648666 cctcttatgttaaaatatacactttcctcccttgtaaagtaaaatctacactccccttccctataagatgcttgaattacaacc 44648749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 25087375 - 25087425
Alignment:
Q  296 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaatta 346  Q
    ||||||||| ||||||| |||||||||||||  |||||||| |||||||||    
T  25087375 cccttgaaaagtaaaatctatactcccctcctctatgagatgcttgaatta 25087425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 350
Target Start/End: Complemental strand, 36512086 - 36512004
Alignment:
Q  268 cctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac 350  Q
    |||||| |||||||||||| ||||||  || ||||||  ||||||||||||| ||||||  | |||||| |||||||| ||||    
T  36512086 cctcttatgttaaaatatatatttttctcctttgaaaaataaaatttatacttccctcctctttgagatgcttgaattgcaac 36512004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 1846620 - 1846564
Alignment:
Q  211 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctc 267  Q
    ||||||||||||| ||| || |||| |  || |||||||||||||||||||||||||    
T  1846620 agagtaaattacacttccctcccctcaaagatgcttgaattacactcccctcccctc 1846564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 51612455 - 51612411
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||||||||||| |||||| ||| |||| ||||||||||||||    
T  51612455 taaaatttatactctcctcccttataagatgcttgaattacaacc 51612411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 5e-20; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 235 - 350
Target Start/End: Original strand, 21037316 - 21037427
Alignment:
Q  235 taagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgag 334  Q
    |||| |||||||||||||||||||||||| |||    || |||||||||||||| |||   ||||||||| |||||||||||||||||||||  ||| ||    
T  21037316 taagagaagcttgaattacactcccctcctctc----ttatgttaaaatatacactttcctcccttgaaaagtaaaatttatactcccctccattataag 21037411  T
Q  335 atacttgaattacaac 350  Q
    || |||||||||||||    
T  21037412 attcttgaattacaac 21037427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 209 - 351
Target Start/End: Original strand, 51019643 - 51019781
Alignment:
Q  209 taagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggta 308  Q
    ||||||||||||||| | | || ||||||| || ||||||||||||||| ||||    ||||||| |||||||||||||| ||    ||||||||| |||    
T  51019643 taagagtaaattacactgccctcccctaagagatgcttgaattacactctcctc----ccctcttatgttaaaatatacacttccctcccttgaaaagta 51019738  T
Q  309 aaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||||||| ||||||  | |||||| |||||||| |||||    
T  51019739 aaatttatacttccctccaatttgagatgcttgaattgcaacc 51019781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 348
Target Start/End: Original strand, 6711258 - 6711359
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    |||||||||||||| ||||||||||    |||||||||||||||||  |    ||||||||| |||||||||||||||||||||| ||| |||| |||||    
T  6711258 gcttgaattacacttccctcccctc----ttgtgttaaaatatacacctccctcccttgaaaagtaaaatttatactcccctcccctataagatgcttga 6711353  T
Q  343 attaca 348  Q
    ||||||    
T  6711354 attaca 6711359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 211 - 351
Target Start/End: Complemental strand, 23722132 - 23721996
Alignment:
Q  211 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaa 310  Q
    ||||||||||||| ||| || |||| |  || |||||||||||||||||||||    |||||| |||||||||||||| |     |||||||||  ||||    
T  23722132 agagtaaattacacttccctcccctcaaagatgcttgaattacactcccctcc----cctcttatgttaaaatatacactaccctcccttgaaaaataaa 23722037  T
Q  311 atttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||| ||||||||||| ||| |||| || |||||||||||    
T  23722036 atttacactcccctcccttataagatgctagaattacaacc 23721996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 35666000 - 35666079
Alignment:
Q  269 ctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattaca 348  Q
    ||||| |||||||||||||| ||    ||||||||| |||||||||||||||||||||| ||| |||| |||||||||||    
T  35666000 ctcttatgttaaaatatacacttacctcccttgaaaagtaaaatttatactcccctcccctataagatgcttgaattaca 35666079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 244 - 358
Target Start/End: Complemental strand, 32448988 - 32448877
Alignment:
Q  244 cttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaa 343  Q
    ||||||||||||||| ||||||||    || |||||||||||||| ||    || |||||| |||||| ||||||||||||||| ||| | |||||||||    
T  32448988 cttgaattacactccactcccctc----ttatgttaaaatatacacttccctcctttgaaaagtaaaagttatactcccctcccttataaaatacttgaa 32448893  T
Q  344 ttacaa-cctctccct 358  Q
    |||||| |||||||||    
T  32448892 ttacaatcctctccct 32448877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 243 - 350
Target Start/End: Complemental strand, 37424495 - 37424393
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    |||||||||||| ||||||||||||    || |||||||||||||| |     |||||||||| ||||||||||||||||||||| ||| |||| |||||    
T  37424495 gcttgaattacattcccctcccctc----ttatgttaaaatatacactcacctcccttgaaag-taaaatttatactcccctcccctataagatgcttga 37424401  T
Q  343 attacaac 350  Q
    ||||||||    
T  37424400 attacaac 37424393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 358
Target Start/End: Complemental strand, 7480005 - 7479917
Alignment:
Q  270 tcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctccc-gtatgagatacttgaattacaacctctccct 358  Q
    |||| |||||||||||||| ||  |||| |||||| ||||||||||||||||||||||  ||| |||| ||||||||||||| |||||||    
T  7480005 tcttatgttaaaatatacacttcctccc-ttgaaaagtaaaatttatactcccctccctttataagatgcttgaattacaacttctccct 7479917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 211 - 325
Target Start/End: Original strand, 8138316 - 8138426
Alignment:
Q  211 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaa 310  Q
    ||||||||||||| | | || ||||||| |||||||||||||||| |||||    | |||||| |||||||||||||| ||    |||||||||  ||||    
T  8138316 agagtaaattacactcccctcccctaagagaagcttgaattacacacccct----ttcctcttatgttaaaatatacacttccctcccttgaaaaataaa 8138411  T
Q  311 atttatactcccctc 325  Q
    |||||||||||||||    
T  8138412 atttatactcccctc 8138426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 351
Target Start/End: Complemental strand, 49703068 - 49702987
Alignment:
Q  270 tcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||| |||||||||||||||||||  |||||| || |||||||||||||| | ||||| ||| ||||  |||||||||||||    
T  49703068 tcttatgttaaaatatacatttttctcccttgtaaagtaaaatttatacttctctcccttataagatgtttgaattacaacc 49702987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 348
Target Start/End: Complemental strand, 25010106 - 25010005
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    ||||||||||||||| |||||||||    || |||||||||||||| |   | ||||||||| |||||||||||||  ||||||| ||| |||| |||||    
T  25010106 gcttgaattacactctcctcccctc----ttatgttaaaatatacactccattcccttgaaaagtaaaatttatacgtccctcccttataagatgcttga 25010011  T
Q  343 attaca 348  Q
    ||||||    
T  25010010 attaca 25010005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 351
Target Start/End: Original strand, 33046606 - 33046690
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||| ||||||||| |||| |||   ||||||||| |||||||| ||||||||||||| ||| ||||  |||||||||||||    
T  33046606 ccctcttatgttaaaatctacactttactcccttgaaaagtaaaattaatactcccctcccttataagatgtttgaattacaacc 33046690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 351
Target Start/End: Complemental strand, 50825314 - 50825230
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||| |||||||||||||  | | | || |||||| ||||||||||||||| |||||| ||| |||| ||||||||||||||    
T  50825314 ccctcttatgttaaaatataccctctattcctttgaaaagtaaaatttatactctcctcccctataagatgcttgaattacaacc 50825230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 351
Target Start/End: Complemental strand, 54092859 - 54092783
Alignment:
Q  275 tgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||||||||||| ||    ||||||||| | |||||||| ||||||||||| ||| |||||||||||||||||||    
T  54092859 tgttaaaatatacaattccctcccttgaaaagaaaaatttacactcccctcccctataagatacttgaattacaacc 54092783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 353
Target Start/End: Original strand, 4949962 - 4950066
Alignment:
Q  245 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 344  Q
    ||||||||||||||||||| |||    || |||||||||||||| |   | ||||| |||  ||||||| ||||||||||||| ||| |||| |||||||    
T  4949962 ttgaattacactcccctcctctc----ttatgttaaaatatacactcccttcccttaaaaaataaaattaatactcccctcccctataagatgcttgaat 4950057  T
Q  345 tacaacctc 353  Q
    |||||||||    
T  4950058 tacaacctc 4950066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 351
Target Start/End: Complemental strand, 16192364 - 16192260
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    ||||||||||||||||||||| |||    || |||||||||||||| |     | |||| || |||||||||||||||||||||| ||| |||| |||||    
T  16192364 gcttgaattacactcccctcctctc----ttatgttaaaatatacactcccctcacttgcaatgtaaaatttatactcccctcccttataagatgcttga 16192269  T
Q  343 attacaacc 351  Q
    |||||||||    
T  16192268 attacaacc 16192260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 351
Target Start/End: Complemental strand, 20545098 - 20544963
Alignment:
Q  212 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaa 311  Q
    |||||||||||| | | || |||| || || |||||||||||||||||||||    |||||| ||||||||||||||||     ||||| |||  || ||    
T  20545098 gagtaaattacactcccctcccctcagagatgcttgaattacactcccctcc----cctcttatgttaaaatatacattcccctcccttaaaaaatataa 20545003  T
Q  312 tttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    || ||| ||||||||| ||| |||| ||||||||||||||    
T  20545002 ttaataatcccctcccctataagatgcttgaattacaacc 20544963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 4963982 - 4964035
Alignment:
Q  306 gtaaaatttatactcccctcccgtatgagatacttgaattaca-acctctccct 358  Q
    ||||||||||||||||||| || |||||||| ||||||||||| ||||||||||    
T  4963982 gtaaaatttatactcccctaccctatgagatgcttgaattacacacctctccct 4964035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 210 - 348
Target Start/End: Complemental strand, 7797695 - 7797561
Alignment:
Q  210 aagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaa 309  Q
    |||||||||||||| | | || |||| |  || |||||||||||| ||||||||| ||    || |||||||||||||| ||    ||||||||| ||||    
T  7797695 aagagtaaattacactcccctcccctcaaagatgcttgaattacattcccctcccttc----ttatgttaaaatatacacttccctcccttgaaaagtaa 7797600  T
Q  310 aatttatactcccctcccgtatgagatacttgaattaca 348  Q
    |||||| |||||| |||| ||| |||| |||||||||||    
T  7797599 aatttacactcccatcccctataagattcttgaattaca 7797561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 358
Target Start/End: Complemental strand, 796962 - 796910
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattac-aacctctccct 358  Q
    ||||||||||| ||||||||| ||| ||||||||||||||| |||||||||||    
T  796962 taaaatttatattcccctcccttataagatacttgaattacaaacctctccct 796910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 26705120 - 26705171
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattacaacctctccct 358  Q
    ||||||| ||||||||||||| ||| |||| |||||||||||||| ||||||    
T  26705120 taaaattaatactcccctcccctataagatgcttgaattacaacccctccct 26705171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 6232524 - 6232570
Alignment:
Q  313 ttatactcccctcccgtatgagatacttgaattac-aacctctccct 358  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||||||    
T  6232524 ttatactcccctcccttataagatacttgaattacaaacctctccct 6232570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 23265763 - 23265721
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  23265763 taaaatttatactcccctcccttataagatgcttgaattacaa 23265721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 346
Target Start/End: Complemental strand, 17723463 - 17723369
Alignment:
Q  248 aattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaatta 346  Q
    |||||||||||||||||||     || ||||||||||||||  ||   |||||||||  ||||||||||||||||||| | ||| |||| |||||||||    
T  17723463 aattacactcccctcccctt----ttatgttaaaatatacaccttcctcccttgaaaaataaaatttatactcccctcgcctataagatgcttgaatta 17723369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 344
Target Start/End: Original strand, 44664752 - 44664829
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 344  Q
    ||||||| |||||||||||||||| |   |||||||||  ||||||||||| |||||| || ||| |||| |||||||    
T  44664752 ccctcttatgttaaaatatacattctcctcccttgaaaaataaaatttataatccccttccttataagatgcttgaat 44664829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 12250770 - 12250822
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattac-aacctctccct 358  Q
    ||||||||||||||||||||  ||| |||| |||||||||| |||||||||||    
T  12250770 taaaatttatactcccctccattataagatgcttgaattacaaacctctccct 12250822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 351
Target Start/End: Original strand, 19313431 - 19313475
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||||| ||||||||||| ||| |||| ||||||||||||||    
T  19313431 taaaatttacactcccctcccttataagatgcttgaattacaacc 19313475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 351
Target Start/End: Original strand, 46076426 - 46076478
Alignment:
Q  299 ttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||| |||||||||||||||| || || ||||||||  |||||||||||||    
T  46076426 ttgaaaagtaaaatttatactcctcttccctatgagatgattgaattacaacc 46076478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 7e-19; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 245 - 358
Target Start/End: Original strand, 17564698 - 17564807
Alignment:
Q  245 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 344  Q
    |||||||||||| ||||||||||    || |||||||||||||| |     ||||||||| |||||||||||||||||||||| ||| |||| |||||||    
T  17564698 ttgaattacacttccctcccctc----ttatgttaaaatatacactcccctcccttgaaaagtaaaatttatactcccctcccctataagatgcttgaat 17564793  T
Q  345 tacaacctctccct 358  Q
    ||||||||||||||    
T  17564794 tacaacctctccct 17564807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 211 - 336
Target Start/End: Complemental strand, 44284431 - 44284310
Alignment:
Q  211 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaa 310  Q
    ||||||||||||| | | || ||||||| || |||||||||||||||||||||||||    || |||||||||||||| |||   |||||||||  ||||    
T  44284431 agagtaaattacactcccctcccctaagagatgcttgaattacactcccctcccctc----ttatgttaaaatatacactttcctcccttgaaaaataaa 44284336  T
Q  311 atttatactcccctcccgtatgagat 336  Q
    ||||||||||||||||| | ||||||    
T  44284335 atttatactcccctcccctttgagat 44284310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 348
Target Start/End: Original strand, 34363939 - 34364039
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    ||||||||||||||||||||||||     || |||||||||||||||||    ||||||||| ||||||||||||||||||| || ||| |||| |||||    
T  34363939 gcttgaattacactcccctcccct-----ttatgttaaaatatacatttccctcccttgaaaagtaaaatttatactccccttccctataagatgcttga 34364033  T
Q  343 attaca 348  Q
    ||||||    
T  34364034 attaca 34364039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 348
Target Start/End: Complemental strand, 8443353 - 8443273
Alignment:
Q  268 cctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattaca 348  Q
    |||||| |||||||||||||| ||  | ||||||||| ||||||||||||||| |||||| ||| |||| |||||||||||    
T  8443353 cctcttatgttaaaatatacacttccttcccttgaaaagtaaaatttatactctcctcccctataagatgcttgaattaca 8443273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 32903609 - 32903741
Alignment:
Q  211 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttt-tccccttgaaaggtaa 309  Q
    ||||||||||||| |||||| |  |||| |||| |||||||||||||| ||||| ||    || |||||||||||||| |  | ||||||| ||| ||||    
T  32903609 agagtaaattacacttctctccgttaagagaagtttgaattacactccactcccttc----ttatgttaaaatatacactcatctccccttaaaaagtaa 32903704  T
Q  310 aatttatactcccctcccgtatgagatacttgaatta 346  Q
    |||||||||||| ||||| | |||||| |||||||||    
T  32903705 aatttatactccgctcccatttgagatgcttgaatta 32903741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 245 - 348
Target Start/End: Original strand, 14879550 - 14879649
Alignment:
Q  245 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaat 344  Q
    ||||||||||||| |||||||||    || |||||||||||||||||    ||||||||| |||||||||||||||||||||| ||| | ||  ||||||    
T  14879550 ttgaattacactctcctcccctc----ttatgttaaaatatacatttccgtcccttgaaaagtaaaatttatactcccctcccctataacatgtttgaat 14879645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 212 - 353
Target Start/End: Complemental strand, 34925490 - 34925348
Alignment:
Q  212 gagtaaattacatttctctaccctaagggaagcttgaattacactcccctcc-cctccctcttgtgttaaaatatacattttttccccttgaaaggtaaa 310  Q
    |||||||||||| ||| || |||| |  || |||||||||||| || ||||| |||| ||||| |||||||||||||| |     ||||||||| |||||    
T  34925490 gagtaaattacacttccctcccctcaaagatgcttgaattacattctcctccacctctctcttatgttaaaatatacactcccctcccttgaaaagtaaa 34925391  T
Q  311 atttatactcccctcccgtatgagatacttgaattacaacctc 353  Q
    || ||||||| | |||| ||| |||| ||||||||||||||||    
T  34925390 atgtatactctcttcccttataagatgcttgaattacaacctc 34925348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 350
Target Start/End: Complemental strand, 43777078 - 43776941
Alignment:
Q  209 taagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggta 308  Q
    ||||||||||||| | | |||| |||| |  || |||||||||||||||| ||    |||||||| |||| ||||||||| |||   | ||| |||  ||    
T  43777078 taagagtaaattatactcctcttccctcaaagatgcttgaattacactccact----tccctcttatgtttaaatatacactttcctctcttaaaaaata 43776983  T
Q  309 aaatttatactcccctcccgtatgagatacttgaattacaac 350  Q
    ||||||||||||||||||| ||| |||| |||||||||||||    
T  43776982 aaatttatactcccctcccttataagatgcttgaattacaac 43776941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 351
Target Start/End: Original strand, 24809616 - 24809716
Alignment:
Q  248 aattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaag-gtaaaatttatactcccctcccgtatgagatacttgaatta 346  Q
    ||||||||||||||||||||    || |||||||||||||| ||    |||||||||  ||||||||| |||||||||||| ||| |||| |||||||||    
T  24809616 aattacactcccctcccctc----ttatgttaaaatatacacttccatcccttgaaaaagtaaaatttttactcccctcccttataagatgcttgaatta 24809711  T
Q  347 caacc 351  Q
    |||||    
T  24809712 caacc 24809716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 346
Target Start/End: Original strand, 41262122 - 41262201
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaatta 346  Q
    ||||||| |||||||||||| ||||    |||||||||  ||||||||||||||||||||| ||| |||| |||||||||    
T  41262122 ccctcttatgttaaaatatatatttccctcccttgaaaaataaaatttatactcccctcccttataagatgcttgaatta 41262201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 351
Target Start/End: Complemental strand, 11760094 - 11760012
Alignment:
Q  269 ctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||| |||||||||||||| | ||  || |||||| |||||||||||||||||||||  ||| |||| |||| |||||||||    
T  11760094 ctcttatgttaaaatatacactcttctcctttgaaaagtaaaatttatactcccctcctctataagatgcttgcattacaacc 11760012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 353
Target Start/End: Complemental strand, 39999032 - 39998978
Alignment:
Q  299 ttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 353  Q
    |||||| |||| ||||||||||||||||| ||| |||| ||||||||||||||||    
T  39999032 ttgaaaagtaagatttatactcccctcccttataagatgcttgaattacaacctc 39998978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 351
Target Start/End: Complemental strand, 30354617 - 30354472
Alignment:
Q  207 tttaagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctcc-ctcttgtgttaaaatatacattttttccccttgaaag 305  Q
    ||||||||||||||||||||| || |||| |  ||  ||||||||||||||| |||| |||| || || |||||||||||||| |  |  |||||||||     
T  30354617 tttaagagtaaattacatttccctcccctcaaagatacttgaattacactcctctcctctcctcttttatgttaaaatatacactcctctcccttgaaaa 30354518  T
Q  306 gtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||| || ||||||  ||| | | |||||| |||||||| |||||    
T  30354517 gtaaatttgatactcatctctcttgtgagatgcttgaatttcaacc 30354472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 31740149 - 31740096
Alignment:
Q  296 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    ||||||||| |||||||||||||||||||||| ||| |||| ||| ||||||||    
T  31740149 cccttgaaaagtaaaatttatactcccctcccttataagatgcttaaattacaa 31740096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 349
Target Start/End: Complemental strand, 36016808 - 36016707
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    |||||||||||| |||||||    | ||||| |||||||||||||| |   | ||||||||| ||||||||||||||| |||||| ||| |||| |||||    
T  36016808 gcttgaattacaatcccctc----ctctcttatgttaaaatatacactccct-cccttgaaaagtaaaatttatactctcctcccttataagatgcttga 36016714  T
Q  343 attacaa 349  Q
    |||||||    
T  36016713 attacaa 36016707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 37872905 - 37872812
Alignment:
Q  258 ccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||||  ||||||| ||||||||||||||||      |||||||| |||||| |||||||||||| || ||| | |||||||||||||||||    
T  37872905 ccctccctcccctcttatgttaaaatatacattccccttccttgaaaagtaaaagttatactcccctaccttataaaatacttgaattacaacc 37872812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 11141050 - 11141006
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||||    
T  11141050 taaaatttatactcccctcccttataagattcttgaattacaacc 11141006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 13439557 - 13439612
Alignment:
Q  297 ccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 353  Q
    ||||||||| ||||||||||||||||||||| ||| ||||  |||||||||||||||    
T  13439557 ccttgaaag-taaaatttatactcccctcccttataagatgtttgaattacaacctc 13439612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 358
Target Start/End: Complemental strand, 37266171 - 37266079
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccc-tcccgtatgagatacttgaattacaacctctccct 358  Q
    ||||||| |||||||||||||| |     ||||||||| |||| ||||||||||||| |||| ||| |||| |||||||||||||| ||||||    
T  37266171 ccctcttatgttaaaatatacactccactcccttgaaaagtaagatttatactccccctcccctataagatgcttgaattacaacccctccct 37266079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 351
Target Start/End: Original strand, 40791094 - 40791178
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||| |||||||||||||| |     ||||||||| ||||||||||||||||| |||| ||| ||||  |||||||||||||    
T  40791094 ccctcttatgttaaaatatacactaccctcccttgaaaagtaaaatttatactcccttcccttataagatgtttgaattacaacc 40791178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 347
Target Start/End: Complemental strand, 4257261 - 4257210
Alignment:
Q  296 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattac 347  Q
    ||||||||| ||| |||||||||||||||||| ||||||||  |||||||||    
T  4257261 cccttgaaaagtagaatttatactcccctcccctatgagatgattgaattac 4257210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 353
Target Start/End: Complemental strand, 17734941 - 17734855
Alignment:
Q  266 tccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 353  Q
    |||||||| ||||||||||||||||     ||||||||| |||||||||||| |||||| || ||| |||| |||| |||||||||||    
T  17734941 tccctcttatgttaaaatatacattcacctcccttgaaaagtaaaatttata-tccccttccttataagatgcttggattacaacctc 17734855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 351
Target Start/End: Original strand, 37836947 - 37837051
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    |||||||||||||||||||    || || || ||||||||||||||||     ||||||||| |||||||||||||| | |||||  || |||| |||||    
T  37836947 gcttgaattacactcccct----tctctattatgttaaaatatacattcccctcccttgaaaagtaaaatttatacttctctccccaataagatgcttga 37837042  T
Q  343 attacaacc 351  Q
    |||||||||    
T  37837043 attacaacc 37837051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 351
Target Start/End: Complemental strand, 3940261 - 3940162
Alignment:
Q  248 aattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattac 347  Q
    ||||||||||||||||||||    || | |||||||||||||||||  || |||||| ||||||||||||  | |||  | ||| |||| ||||||||||    
T  3940261 aattacactcccctcccctc----ttatattaaaatatacatttttctcctttgaaaagtaaaatttatatccacctttcctataagatgcttgaattac 3940166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 6293174 - 6293132
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  6293174 taaaatttatactcccctcccttataagatgcttgaattacaa 6293132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 14364438 - 14364396
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  14364438 taaaatttatactcccctcccttataagatgcttgaattacaa 14364396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 269
Target Start/End: Complemental strand, 40134201 - 40134143
Alignment:
Q  211 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccc 269  Q
    ||||||||||||| | | || ||||| | |||||||||||||||||||| |||||||||    
T  40134201 agagtaaattacactcccctcccctatgagaagcttgaattacactcccttcccctccc 40134143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 351
Target Start/End: Original strand, 253571 - 253656
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatact-cccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||| |||||||||||||| |  |  ||||||||| |||| ||||||||| |||||||| ||| ||||  |||||||||||||    
T  253571 ccctcttatgttaaaatatacactcctctcccttgaaaagtaagatttatactccccctcccctataagatgattgaattacaacc 253656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 351
Target Start/End: Complemental strand, 662287 - 662202
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatact-cccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||| |||||||||||||| |  |  ||||||||| |||| ||||||||| |||||||| ||| ||||  |||||||||||||    
T  662287 ccctcttatgttaaaatatacactcctctcccttgaaaagtaagatttatactccccctcccctataagatgattgaattacaacc 662202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 351
Target Start/End: Complemental strand, 848085 - 848000
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatact-cccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||| |||||||||||||| |  |  ||||||||| |||| ||||||||| |||||||| ||| ||||  |||||||||||||    
T  848085 ccctcttatgttaaaatatacactcctctcccttgaaaagtaagatttatactccccctcccctataagatgattgaattacaacc 848000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 351
Target Start/End: Original strand, 17496315 - 17496392
Alignment:
Q  275 tgttaaaatatacattttttccccttgaaaggtaaaatttatact-cccctcccgtatgagatacttgaattacaacc 351  Q
    |||||||||||||| | |   ||||||||| |||| ||||||||| |||||||| ||| |||| ||||||||||||||    
T  17496315 tgttaaaatatacactctcctcccttgaaaagtaagatttatactccccctcccctataagatgcttgaattacaacc 17496392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 21304628 - 21304579
Alignment:
Q  301 gaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac 350  Q
    ||||||||||||||| |||||| |||| ||| |||| |||||||||||||    
T  21304628 gaaaggtaaaatttacactcccatcccttataagattcttgaattacaac 21304579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 29636468 - 29636411
Alignment:
Q  210 aagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctc 267  Q
    |||||||||||||| | |||| |||| |  || |||||||||||||||||||||||||    
T  29636468 aagagtaaattacaatcctcttccctcaaagatgcttgaattacactcccctcccctc 29636411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 269
Target Start/End: Original strand, 42198563 - 42198592
Alignment:
Q  240 gaagcttgaattacactcccctcccctccc 269  Q
    ||||||||||||||||||||||||||||||    
T  42198563 gaagcttgaattacactcccctcccctccc 42198592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 351
Target Start/End: Original strand, 44746221 - 44746306
Alignment:
Q  266 tccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||||| ||||||||||||||||     |||||||||  ||||||| ||||| ||||||| ||| ||||  |||||||||||||    
T  44746221 tccctcttatgttaaaatatacattcccctcccttgaaaaataaaattaatacttccctcccctataagatgtttgaattacaacc 44746306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 14880269 - 14880213
Alignment:
Q  211 agagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctc 267  Q
    ||||||||||||| | |||| |||| |  || |||||||||||||||||||||||||    
T  14880269 agagtaaattacactcctctcccctcaaagatgcttgaattacactcccctcccctc 14880213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 350
Target Start/End: Original strand, 3391755 - 3391886
Alignment:
Q  215 taaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaattt 314  Q
    ||||||||| |||||| ||||||| |||| |||||||||| | | ||||||||    || |||||||||||||| |     ||||| ||| |||||||||    
T  3391755 taaattacacttctcttccctaagagaagtttgaattacatttcactcccctc----ttatgttaaaatatacactcccctcccttaaaaagtaaaattt 3391850  T
Q  315 atactcccctcccgtatgagatacttgaattacaac 350  Q
    ||||||||||||| |||||||| |||||||||||||    
T  3391851 atactcccctcccctatgagatgcttgaattacaac 3391886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 350
Target Start/End: Complemental strand, 40401600 - 40401497
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    |||||||||||||||||||||||||    || |||||||||||||| |   | ||||||||| ||||||||||||||| |||||| ||| |||| |||||    
T  40401600 gcttgaattacactcccctcccctc----ttatgttaaaatatacactcccttcccttgaaaagtaaaatttatactctcctcccttataagatgcttga 40401505  T
Q  343 attacaac 350  Q
    ||||||||    
T  40401504 attacaac 40401497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 262 - 351
Target Start/End: Original strand, 5227893 - 5227982
Alignment:
Q  262 cccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||||||||| ||||||||||||||||     ||||| ||| |||||||||||||||||||||| ||| |||| ||||||||||||||    
T  5227893 cccctccctcttatgttaaaatatacattcccctcccttaaaaagtaaaatttatactcccctcccttataagatgcttgaattacaacc 5227982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 353
Target Start/End: Original strand, 23232912 - 23232996
Alignment:
Q  269 ctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 353  Q
    ||||||||||||||||||||||      |||||||| |||||||||||||||||||||  ||| |||| ||||||||||||||||    
T  23232912 ctcttgtgttaaaatatacattccccttccttgaaaagtaaaatttatactcccctcctctataagatgcttgaattacaacctc 23232996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 208 - 351
Target Start/End: Complemental strand, 16426093 - 16425954
Alignment:
Q  208 ttaagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggt 307  Q
    |||||||||||||||| | | || ||||||| || |||| || || |||||| |||||||    || |||||||||||||| |     ||||||||| ||    
T  16426093 ttaagagtaaattacactcccctcccctaagagatgcttcaagtatactcccttcccctc----ttatgttaaaatatacactcccctcccttgaaaagt 16425998  T
Q  308 aaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    || ||||||||||||||||| |||||||| |||||| |||||||    
T  16425997 aatatttatactcccctcccctatgagatgcttgaaatacaacc 16425954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 209 - 348
Target Start/End: Original strand, 22711626 - 22711761
Alignment:
Q  209 taagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggta 308  Q
    ||||||||||||||| | |||| |||| |  || |||||| |||||||| |||||||||    || |||||||||||||| |     | ||||||| |||    
T  22711626 taagagtaaattacactcctcttccctcaaagatgcttgatttacactctcctcccctc----ttatgttaaaatatacactccactctcttgaaaagta 22711721  T
Q  309 aaatttatactcccctcccgtatgagatacttgaattaca 348  Q
    ||||||||||||||||||| ||| |||| |||||||||||    
T  22711722 aaatttatactcccctcccctataagatgcttgaattaca 22711761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 243 - 354
Target Start/End: Complemental strand, 27619682 - 27619575
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    |||||||||||||||||||||||||    || |||||||||||||| |  |  ||||| ||| ||||| || ||||||||||||| | |||||| |||||    
T  27619682 gcttgaattacactcccctcccctc----ttatgttaaaatatacactcctctcccttaaaaagtaaatttgatactcccctcccttgtgagatgcttga 27619587  T
Q  343 attacaacctct 354  Q
    ||| ||||||||    
T  27619586 atttcaacctct 27619575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 245 - 327
Target Start/End: Complemental strand, 36688906 - 36688828
Alignment:
Q  245 ttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctccc 327  Q
    |||||||||||||||||||||||    || |||||||||||||| |||   ||||||||| |||||| |||||||||||||||    
T  36688906 ttgaattacactcccctcccctc----ttatgttaaaatatacactttcctcccttgaaaagtaaaagttatactcccctccc 36688828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 351
Target Start/End: Original strand, 42813067 - 42813152
Alignment:
Q  266 tccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||||| ||||||||||||||   |   || |||||| |||||||||||||||||||||| ||| |||| ||||||||||||||    
T  42813067 tccctcttatgttaaaatatacacactcctccgttgaaaagtaaaatttatactcccctcccctataagatgcttgaattacaacc 42813152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 48872086 - 48872138
Alignment:
Q  296 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattaca 348  Q
    ||||||||| |||||||||||||||||||||| ||| |||| |||||||||||    
T  48872086 cccttgaaaagtaaaatttatactcccctcccatataagatgcttgaattaca 48872138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 11696258 - 11696337
Alignment:
Q  270 tcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    |||| |||||||| ||||| |||   || |||||| |||||||||||||||| ||||| |||||||| ||||||||||||    
T  11696258 tcttatgttaaaagatacactttcctccattgaaaagtaaaatttatactcctctcccctatgagatgcttgaattacaa 11696337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 351
Target Start/End: Original strand, 38790098 - 38790202
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    ||||||||||||||||||||    ||||||| |||||||||||||| |  |  || |||||| ||||| || ||||||||||||| |||||||  |||||    
T  38790098 gcttgaattacactcccctc----ccctcttatgttaaaatatacactcatctcctttgaaaagtaaagttgatactcccctcccttatgagaagcttga 38790193  T
Q  343 attacaacc 351  Q
    ||| |||||    
T  38790194 atttcaacc 38790202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 26200477 - 26200415
Alignment:
Q  296 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctctccct 358  Q
    ||||||||| ||||||||| ||||  |||||| ||| |||| |||||||||||||||||||||    
T  26200477 cccttgaaaagtaaaatttgtactttcctcccttataagatgcttgaattacaacctctccct 26200415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 349
Target Start/End: Original strand, 26902711 - 26902785
Alignment:
Q  275 tgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    |||||||||||||| ||||  |||||||||  ||||||||| |||| |||||| ||| |||| ||||||||||||    
T  26902711 tgttaaaatatacacttttctcccttgaaaaataaaatttacactctcctcccctataagatgcttgaattacaa 26902785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 353
Target Start/End: Complemental strand, 33869947 - 33869890
Alignment:
Q  296 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 353  Q
    ||||||||| |||||||||||||||||||| | ||| ||||  |||||||||||||||    
T  33869947 cccttgaaaagtaaaatttatactcccctctcttataagatgtttgaattacaacctc 33869890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 351
Target Start/End: Complemental strand, 46011198 - 46011064
Alignment:
Q  213 agtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaat 312  Q
    ||||||||||| | |||| |||| |  || |||||||||||||||||||    || ||||| ||||||||||| || |     ||||||||| | |||||    
T  46011198 agtaaattacactcctctcccctcaaagatgcttgaattacactcccct----tctctcttatgttaaaatatgcactcccctcccttgaaaaggaaaat 46011103  T
Q  313 ttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||||||||||| ||| ||||  |||||||||||||    
T  46011102 ttatactcccctcccctataagatgtttgaattacaacc 46011064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 358
Target Start/End: Complemental strand, 2146852 - 2146800
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattac-aacctctccct 358  Q
    ||||||||||||||||||||| ||| |||| |||||||||| |||||||||||    
T  2146852 taaaatttatactcccctcccttataagatgcttgaattacaaacctctccct 2146800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 11639922 - 11639998
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccc 323  Q
    ||||||||||||||||||||    ||||||| |||||||||||||| | |   || |||||| ||||||||||||||||||    
T  11639922 gcttgaattacactcccctc----ccctcttatgttaaaatatacactctcctcctttgaaaagtaaaatttatactcccc 11639998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 351
Target Start/End: Original strand, 29615542 - 29615646
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    ||||||||||||||| ||||    ||||||| ||||||||||||||||     ||||| ||| |||||||| |||||||| |||| ||| |||| ||| |    
T  29615542 gcttgaattacactctcctc----ccctcttatgttaaaatatacattcccctcccttaaaaagtaaaattaatactcccttcccttataagatgcttaa 29615637  T
Q  343 attacaacc 351  Q
    |||||||||    
T  29615638 attacaacc 29615646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 351
Target Start/End: Original strand, 32387523 - 32387610
Alignment:
Q  264 cctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||||||| |||||||||||||| ||    ||||||||| ||||||||||||||||  | || | |||||| |||||||| |||||    
T  32387523 cctccctcttatgttaaaatatacacttccatcccttgaaaagtaaaatttatactccttttccatttgagatgcttgaattgcaacc 32387610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 351
Target Start/End: Original strand, 38987778 - 38987882
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    |||||||||| ||||||||||||||    || |||||||||||||| |     | ||||||| |||||||||| ||||||||||| ||| ||||  ||||    
T  38987778 gcttgaattaaactcccctcccctc----ttatgttaaaatatacactccactctcttgaaaagtaaaatttacactcccctcccctataagatgtttga 38987873  T
Q  343 attacaacc 351  Q
    |||||||||    
T  38987874 attacaacc 38987882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 23727822 - 23727887
Alignment:
Q  275 tgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaa 343  Q
    |||||||||||||| || |||   |||||| |||||||||||||||||||||| ||| |||| ||||||    
T  23727822 tgttaaaatatacacttcttc---ttgaaaagtaaaatttatactcccctcccttataagatgcttgaa 23727887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 326
Target Start/End: Original strand, 29736157 - 29736236
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcc 326  Q
    |||||||||||||||| ||    |||||||| ||||||||||||||||||   ||||||||| ||||||| || ||||| ||||    
T  29736157 gcttgaattacactccact----tccctcttatgttaaaatatacattttccacccttgaaaagtaaaatctacactcctctcc 29736236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 40344416 - 40344374
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  40344416 taaaatttatactcccctcccttataagatgcttgaattacaa 40344374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 348
Target Start/End: Complemental strand, 8123305 - 8123225
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattaca 348  Q
    ||||||| |||||||||||||| ||    | |||||||  |||||||||||| |||||||| ||| ||||||||||||||||    
T  8123305 ccctcttatgttaaaatatacacttccctctcttgaaaattaaaatttatac-cccctcccctataagatacttgaattaca 8123225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 351
Target Start/End: Complemental strand, 19333048 - 19332995
Alignment:
Q  298 cttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||| |||||||||||||||||||||| ||| |||| |||| | |||||||    
T  19333048 cttgaaaagtaaaatttatactcccctcccctataagatgcttgcactacaacc 19332995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 350
Target Start/End: Original strand, 45941500 - 45941581
Alignment:
Q  269 ctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaac 350  Q
    ||||| |||||||||||| |||  |  || ||| || ||||||| ||||||||| |||| ||| ||||||||||||||||||    
T  45941500 ctcttatgttaaaatatatattcctctcctttgtaaagtaaaatgtatactcccgtcccttataagatacttgaattacaac 45941581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 358
Target Start/End: Complemental strand, 29824008 - 29823956
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattac-aacctctccct 358  Q
    ||||||||||||||||||| | ||| |||| |||||||||| |||||||||||    
T  29824008 taaaatttatactcccctctcttataagatgcttgaattacaaacctctccct 29823956  T

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Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 351
Target Start/End: Original strand, 34834894 - 34834946
Alignment:
Q  299 ttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    |||||| |||||||||||| ||||||||  ||| |||| ||||||||||||||    
T  34834894 ttgaaaagtaaaatttatattcccctcctttataagatgcttgaattacaacc 34834946  T

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Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 348
Target Start/End: Complemental strand, 36848525 - 36848445
Alignment:
Q  268 cctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattaca 348  Q
    |||||| |||||||||||||| |||   ||||| ||| |||||||||||||| ||||||| ||| | ||  ||||||||||    
T  36848525 cctcttatgttaaaatatacactttcctccctttaaaagtaaaatttatacttccctcccttataaaatgtttgaattaca 36848445  T

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Target: scaffold0159 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 351
Target Start/End: Original strand, 34408 - 34510
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    |||||||||||||||||||||      |||| ||||||||||||||||  |  |||||||||  ||||||||||||||||||||| ||| |||| |||||    
T  34408 gcttgaattacactcccctcc------tcttatgttaaaatatacattcctcacccttgaaaaataaaatttatactcccctcccttataagatgcttga 34501  T
Q  343 attacaacc 351  Q
    ||| |||||    
T  34502 attgcaacc 34510  T

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Target: scaffold0068 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 351
Target Start/End: Original strand, 59286 - 59390
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    ||||||||||||||| |||||||||    || |||||||||||||| |     ||||||||| |||||||||||||||||||||  ||| |||| |||||    
T  59286 gcttgaattacactctcctcccctc----ttatgttaaaatatacactcccctcccttgaaaagtaaaatttatactcccctcctctataagatgcttga 59381  T
Q  343 attacaacc 351  Q
    |||||||||    
T  59382 attacaacc 59390  T

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Target: scaffold0289 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 243 - 354
Target Start/End: Complemental strand, 4096 - 3990
Alignment:
Q  243 gcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttga 342  Q
    |||||||||||||||||||||| ||    || |||||||||||||| ||    |||||||||  |||||||||||| |||||||| ||| ||||||||||    
T  4096 gcttgaattacactcccctcccatc----ttatgttaaaatatacacttccgtcccttgaaaattaaaatttatac-cccctcccctataagatacttga 4002  T
Q  343 attacaacctct 354  Q
    |||||| |||||    
T  4001 attacatcctct 3990  T

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Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 208 - 351
Target Start/End: Complemental strand, 14806 - 14667
Alignment:
Q  208 ttaagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggt 307  Q
    |||||||||||||||| | | || ||||||| || |||| || || |||||| |||||||    || |||||||||||||| |     ||||||||| ||    
T  14806 ttaagagtaaattacactcccctcccctaagagatgcttcaagtatactcccttcccctc----ttatgttaaaatatacactcccctcccttgaaaagt 14711  T
Q  308 aaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    || ||||||||||||||||| |||||||| |||||| |||||||    
T  14710 aatatttatactcccctcccctatgagatgcttgaaatacaacc 14667  T

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Target: scaffold0003; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 208 - 351
Target Start/End: Complemental strand, 28952 - 28813
Alignment:
Q  208 ttaagagtaaattacatttctctaccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggt 307  Q
    |||||||||||||||| | | || ||||||| || |||| || || |||||| |||||||    || |||||||||||||| |     ||||||||| ||    
T  28952 ttaagagtaaattacactcccctcccctaagagatgcttcaagtatactcccttcccctc----ttatgttaaaatatacactcccctcccttgaaaagt 28857  T
Q  308 aaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    || ||||||||||||||||| |||||||| |||||| |||||||    
T  28856 aatatttatactcccctcccctatgagatgcttgaaatacaacc 28813  T

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Target: scaffold0043 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 232 - 342
Target Start/End: Original strand, 67730 - 67836
Alignment:
Q  232 ccctaagggaagcttgaattacactcccctcccctccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtat 331  Q
    ||||||| ||| | ||||||||||||||||||||||    || || ||||||||||| ||||  || |||||| |||||||||||||||| ||||| |||    
T  67730 ccctaagagaaacatgaattacactcccctcccctc----ttatgataaaatatacacttttctcctttgaaaagtaaaatttatactccactcccatat 67825  T
Q  332 gagatacttga 342  Q
     |||| |||||    
T  67826 aagatgcttga 67836  T

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Target: scaffold0971 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0971
Description:

Target: scaffold0971; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 353
Target Start/End: Original strand, 3174 - 3231
Alignment:
Q  296 cccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 353  Q
    ||||||||| |||||||| ||||||||||||| |||||||| ||| |||| |||||||    
T  3174 cccttgaaaagtaaaattgatactcccctcccttatgagatgcttaaatttcaacctc 3231  T

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Target: scaffold0189 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 351
Target Start/End: Original strand, 11335 - 11419
Alignment:
Q  267 ccctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacc 351  Q
    ||||||| |||||||||||||| |     ||||||||| |||||||||| |||||| |||| ||| |||| ||||||||||||||    
T  11335 ccctcttatgttaaaatatacactcccctcccttgaaaagtaaaatttacactcccttcccctataagatgcttgaattacaacc 11419  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 349
Target Start/End: Original strand, 351316 - 351396
Alignment:
Q  269 ctcttgtgttaaaatatacattttttccccttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    ||||| |||||||||||||| ||    |||||||||  ||| ||||||||||||||||| ||| |||| ||||||||||||    
T  351316 ctcttatgttaaaatatacacttcactcccttgaaaaataacatttatactcccctcccctataagatgcttgaattacaa 351396  T

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Target: scaffold0051 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 353
Target Start/End: Complemental strand, 11627 - 11573
Alignment:
Q  298 cttgaaaggtaaaatttatactcccctcccgtatgagatacttgaattacaacctc 353  Q
    ||||||| ||||||||||||| |||||||| ||| |||| ||||||||||||||||    
T  11627 cttgaaaagtaaaatttatac-cccctcccctataagatgcttgaattacaacctc 11573  T

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Target: scaffold0067 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 18721 - 18679
Alignment:
Q  307 taaaatttatactcccctcccgtatgagatacttgaattacaa 349  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  18721 taaaatttatactcccctcccttataagatgcttgaattacaa 18679  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 25295 - 25335
Alignment:
Q  296 cccttgaaaggtaaaatttatactcccctcccgtatgagat 336  Q
    ||||||||| |||||||||||||||||||||| ||| ||||    
T  25295 cccttgaaaagtaaaatttatactcccctcccctataagat 25335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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