View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2513_low_18 (Length: 281)
Name: NF2513_low_18
Description: NF2513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2513_low_18 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 39986930 - 39987210
Alignment:
| Q |
1 |
tgatccttccctcaactccaccaccaccttaacaacttctagcagctctagatcctcaagacaaacaacatatcattattacaaccaacaagaagaagac |
100 |
Q |
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| T |
39986930 |
tgatccttccctcaactccaccaccaccttaacaacttctagcagctctagatcctcaagacaaacaacatatcattattacaaccaacaagaagaagac |
39987029 |
T |
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| Q |
101 |
gaagaatgcttcaacaacttttattacatggatcataataacaacaatgatgaagatttatcctcatcttcttctaaacaacactattatacttatcctt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39987030 |
gaagaatgcttcaacaacttttattacatggatcataataacaacaatgatgaagatttatcctcatcttcttctaaacaacactattatacttatcctt |
39987129 |
T |
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| Q |
201 |
atgcttccactactaatatcactactccaaacactacttataatactatcaacacccccaccacaactgataattactctt |
281 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39987130 |
atgcttccactactactatcactactccaaacactacttataatactatcaacacccccaccacaactgataattactctt |
39987210 |
T |
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