View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2513_low_3 (Length: 527)

Name: NF2513_low_3
Description: NF2513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2513_low_3
NF2513_low_3
[»] chr2 (37 HSPs)
chr2 (44-511)||(14772881-14773353)
chr2 (371-521)||(9583170-9583320)
chr2 (297-508)||(11921897-11922109)
chr2 (297-507)||(6710831-6711043)
chr2 (299-518)||(26312428-26312646)
chr2 (368-525)||(37347778-37347939)
chr2 (369-521)||(34375075-34375226)
chr2 (340-493)||(36887542-36887697)
chr2 (340-508)||(9733647-9733815)
chr2 (306-507)||(16117871-16118075)
chr2 (299-412)||(26297070-26297184)
chr2 (370-500)||(36267001-36267140)
chr2 (428-519)||(15269282-15269373)
chr2 (369-466)||(18970022-18970120)
chr2 (299-437)||(45135717-45135855)
chr2 (340-508)||(32887562-32887730)
chr2 (369-477)||(5038737-5038848)
chr2 (430-485)||(8798679-8798734)
chr2 (339-519)||(28857070-28857255)
chr2 (297-419)||(40999631-40999754)
chr2 (429-507)||(21455045-21455123)
chr2 (454-508)||(31050067-31050121)
chr2 (436-517)||(3668932-3669013)
chr2 (459-508)||(14332048-14332097)
chr2 (429-494)||(23394265-23394330)
chr2 (424-477)||(30465343-30465396)
chr2 (339-395)||(34234879-34234936)
chr2 (339-398)||(13022793-13022853)
chr2 (14-46)||(14766185-14766217)
chr2 (460-508)||(21848156-21848204)
chr2 (339-476)||(65383-65522)
chr2 (431-498)||(4634045-4634112)
chr2 (437-496)||(4755276-4755335)
chr2 (457-518)||(3948936-3948997)
chr2 (435-507)||(41068756-41068829)
chr2 (443-496)||(44677656-44677709)
chr2 (343-477)||(34820868-34821004)
[»] chr1 (39 HSPs)
chr1 (297-519)||(43822730-43822952)
chr1 (297-519)||(13983991-13984214)
chr1 (278-519)||(27544306-27544548)
chr1 (320-523)||(23333736-23333944)
chr1 (297-519)||(25813690-25813912)
chr1 (298-511)||(36166846-36167059)
chr1 (340-499)||(32851727-32851887)
chr1 (297-512)||(47783608-47783824)
chr1 (369-511)||(32451714-32451855)
chr1 (339-508)||(52353747-52353917)
chr1 (299-452)||(40287002-40287154)
chr1 (369-495)||(11120578-11120704)
chr1 (300-498)||(42831601-42831801)
chr1 (432-519)||(38902053-38902140)
chr1 (297-518)||(43675143-43675368)
chr1 (339-507)||(49003324-49003493)
chr1 (339-508)||(51504491-51504663)
chr1 (306-507)||(36297945-36298148)
chr1 (369-519)||(43506284-43506436)
chr1 (384-519)||(47364363-47364498)
chr1 (339-491)||(51061595-51061750)
chr1 (369-489)||(38600939-38601060)
chr1 (339-498)||(11241447-11241608)
chr1 (433-498)||(33780520-33780585)
chr1 (340-466)||(44665316-44665444)
chr1 (429-492)||(42401086-42401149)
chr1 (433-479)||(24555820-24555866)
chr1 (429-509)||(32913944-32914024)
chr1 (434-508)||(33326188-33326262)
chr1 (437-494)||(37073759-37073816)
chr1 (429-486)||(42483687-42483744)
chr1 (370-481)||(51263217-51263327)
chr1 (429-509)||(31206293-31206372)
chr1 (429-476)||(7789797-7789844)
chr1 (340-449)||(11566896-11567007)
chr1 (340-410)||(11569974-11570045)
chr1 (428-489)||(22680465-22680526)
chr1 (443-507)||(32545055-32545119)
chr1 (445-489)||(34942476-34942520)
[»] chr7 (31 HSPs)
chr7 (297-519)||(36657836-36658059)
chr7 (297-521)||(36481952-36482177)
chr7 (297-527)||(44441544-44441776)
chr7 (297-499)||(43302086-43302291)
chr7 (281-522)||(23156185-23156427)
chr7 (313-518)||(47841370-47841577)
chr7 (305-500)||(37698450-37698643)
chr7 (340-489)||(31330390-31330541)
chr7 (320-522)||(36656553-36656756)
chr7 (302-407)||(44441347-44441453)
chr7 (339-494)||(4958233-4958393)
chr7 (340-507)||(5513805-5513975)
chr7 (339-492)||(48767128-48767286)
chr7 (278-519)||(39853703-39853943)
chr7 (339-497)||(19987154-19987314)
chr7 (343-499)||(29914369-29914528)
chr7 (420-507)||(30859649-30859736)
chr7 (339-467)||(2008584-2008714)
chr7 (298-519)||(46747980-46748197)
chr7 (340-489)||(38360762-38360911)
chr7 (321-521)||(32724208-32724413)
chr7 (433-511)||(33815884-33815962)
chr7 (321-508)||(38223952-38224143)
chr7 (424-519)||(31322260-31322355)
chr7 (299-467)||(36901035-36901206)
chr7 (446-520)||(9429742-9429816)
chr7 (369-423)||(13057896-13057950)
chr7 (331-467)||(6068084-6068221)
chr7 (429-489)||(38974760-38974820)
chr7 (369-410)||(46282187-46282228)
chr7 (369-519)||(48615234-48615386)
[»] chr8 (45 HSPs)
chr8 (297-511)||(35468286-35468500)
chr8 (300-477)||(2603062-2603240)
chr8 (305-519)||(31226417-31226632)
chr8 (300-519)||(37673704-37673929)
chr8 (297-495)||(5535765-5535964)
chr8 (297-511)||(14426076-14426291)
chr8 (298-519)||(1155084-1155310)
chr8 (297-517)||(9604451-9604673)
chr8 (306-507)||(18806528-18806729)
chr8 (297-511)||(6518999-6519213)
chr8 (297-521)||(23982198-23982427)
chr8 (321-511)||(13628992-13629184)
chr8 (321-511)||(13729404-13729596)
chr8 (320-505)||(31128518-31128704)
chr8 (369-444)||(5978539-5978614)
chr8 (278-440)||(9134085-9134248)
chr8 (320-513)||(5139630-5139823)
chr8 (340-488)||(28540667-28540817)
chr8 (340-494)||(11777640-11777795)
chr8 (433-519)||(9135092-9135177)
chr8 (340-491)||(23036790-23036943)
chr8 (371-521)||(4797178-4797329)
chr8 (339-467)||(8673598-8673728)
chr8 (369-477)||(30714038-30714147)
chr8 (369-477)||(30721815-30721924)
chr8 (369-484)||(7288248-7288364)
chr8 (320-467)||(16531569-16531717)
chr8 (297-440)||(9133756-9133899)
chr8 (339-495)||(3628224-3628380)
chr8 (340-488)||(28557242-28557392)
chr8 (369-492)||(38937818-38937942)
chr8 (369-486)||(23812551-23812670)
chr8 (446-508)||(13079886-13079948)
chr8 (463-521)||(4326033-4326091)
chr8 (297-457)||(28567760-28567922)
chr8 (297-457)||(28575353-28575515)
chr8 (454-491)||(36316844-36316881)
chr8 (452-523)||(21353382-21353453)
chr8 (457-507)||(3194856-3194905)
chr8 (429-495)||(7177002-7177068)
chr8 (443-508)||(36317071-36317136)
chr8 (340-395)||(10954144-10954200)
chr8 (340-395)||(10962149-10962205)
chr8 (429-489)||(41438498-41438558)
chr8 (429-489)||(42374297-42374357)
[»] chr6 (17 HSPs)
chr6 (314-519)||(32977319-32977526)
chr6 (320-519)||(32658373-32658573)
chr6 (297-519)||(5002316-5002540)
chr6 (297-467)||(22281767-22281938)
chr6 (339-500)||(7693889-7694052)
chr6 (371-512)||(33755768-33755909)
chr6 (300-457)||(21940941-21941099)
chr6 (369-523)||(387751-387906)
chr6 (369-499)||(31743528-31743659)
chr6 (377-508)||(3705678-3705810)
chr6 (429-496)||(3543286-3543353)
chr6 (438-489)||(6321717-6321768)
chr6 (372-452)||(9491625-9491706)
chr6 (436-489)||(3436015-3436068)
chr6 (339-423)||(18804220-18804305)
chr6 (340-407)||(7879531-7879599)
chr6 (442-498)||(12119735-12119791)
[»] chr4 (42 HSPs)
chr4 (297-519)||(52199756-52199979)
chr4 (307-527)||(822319-822541)
chr4 (279-519)||(39055100-39055338)
chr4 (297-527)||(35331923-35332154)
chr4 (297-521)||(35382310-35382534)
chr4 (285-519)||(39629145-39629376)
chr4 (369-499)||(23359128-23359258)
chr4 (388-505)||(45833894-45834010)
chr4 (297-519)||(2396252-2396475)
chr4 (306-519)||(10180561-10180775)
chr4 (298-521)||(35144344-35144566)
chr4 (369-508)||(35308943-35309083)
chr4 (340-508)||(49211023-49211194)
chr4 (369-512)||(8824989-8825129)
chr4 (369-507)||(51655153-51655295)
chr4 (348-500)||(12447422-12447576)
chr4 (369-481)||(38864966-38865075)
chr4 (369-484)||(22628494-22628610)
chr4 (339-410)||(30865886-30865958)
chr4 (340-508)||(44500489-44500659)
chr4 (427-507)||(42426850-42426930)
chr4 (436-507)||(23607447-23607518)
chr4 (369-519)||(26699032-26699183)
chr4 (369-475)||(53096599-53096706)
chr4 (376-521)||(8489442-8489588)
chr4 (340-410)||(43968777-43968848)
chr4 (446-520)||(28909426-28909500)
chr4 (437-508)||(28897685-28897756)
chr4 (299-410)||(2574106-2574218)
chr4 (429-489)||(17058763-17058823)
chr4 (339-481)||(25435889-25436032)
chr4 (340-410)||(31262471-31262545)
chr4 (297-360)||(5036067-5036130)
chr4 (470-521)||(54018401-54018452)
chr4 (423-509)||(22424974-22425060)
chr4 (445-491)||(30865978-30866024)
chr4 (446-488)||(44540009-44540051)
chr4 (367-401)||(45804010-45804044)
chr4 (463-500)||(28967347-28967384)
chr4 (429-509)||(36219162-36219242)
chr4 (436-492)||(41115940-41115996)
chr4 (297-360)||(45832521-45832585)
[»] chr3 (29 HSPs)
chr3 (297-521)||(46006024-46006248)
chr3 (369-512)||(35539616-35539759)
chr3 (369-500)||(13768520-13768649)
chr3 (368-519)||(46048908-46049061)
chr3 (369-500)||(13755119-13755248)
chr3 (425-523)||(36619242-36619339)
chr3 (449-519)||(55222597-55222667)
chr3 (339-517)||(26085062-26085232)
chr3 (340-507)||(36902283-36902451)
chr3 (432-486)||(29950766-29950820)
chr3 (432-486)||(29999920-29999974)
chr3 (340-523)||(30595024-30595209)
chr3 (439-511)||(24744374-24744445)
chr3 (333-489)||(41211973-41212130)
chr3 (343-520)||(45603381-45603563)
chr3 (437-499)||(40242152-40242214)
chr3 (429-507)||(1559518-1559596)
chr3 (446-496)||(28197541-28197591)
chr3 (332-409)||(47075605-47075683)
chr3 (457-518)||(44110945-44111006)
chr3 (442-507)||(54425526-54425591)
chr3 (427-495)||(40861203-40861271)
chr3 (436-508)||(52744678-52744750)
chr3 (323-489)||(36277738-36277910)
chr3 (369-499)||(49109025-49109156)
chr3 (339-444)||(54422720-54422826)
chr3 (432-527)||(55272859-55272954)
chr3 (299-360)||(35539517-35539579)
chr3 (429-489)||(1151543-1151603)
[»] chr5 (26 HSPs)
chr5 (298-527)||(7293000-7293230)
chr5 (321-519)||(41520809-41521009)
chr5 (297-519)||(18396466-18396688)
chr5 (340-519)||(26675427-26675607)
chr5 (340-519)||(26947035-26947215)
chr5 (340-519)||(1309710-1309890)
chr5 (340-521)||(13420654-13420836)
chr5 (300-443)||(42951756-42951900)
chr5 (369-483)||(2375574-2375688)
chr5 (298-452)||(13486535-13486693)
chr5 (306-508)||(12593087-12593291)
chr5 (369-478)||(33133236-33133345)
chr5 (339-519)||(837694-837874)
chr5 (377-491)||(25324196-25324309)
chr5 (369-492)||(29558363-29558486)
chr5 (369-523)||(1666716-1666870)
chr5 (371-457)||(3558800-3558887)
chr5 (402-495)||(42551051-42551145)
chr5 (439-507)||(8571950-8572018)
chr5 (427-498)||(2970342-2970413)
chr5 (429-500)||(4747036-4747107)
chr5 (424-497)||(11200476-11200549)
chr5 (340-507)||(15468082-15468250)
chr5 (369-491)||(35463202-35463326)
chr5 (428-523)||(8228852-8228947)
chr5 (446-489)||(10100397-10100440)
[»] scaffold0017 (1 HSPs)
scaffold0017 (369-520)||(31749-31900)
[»] scaffold0036 (2 HSPs)
scaffold0036 (386-521)||(63593-63729)
scaffold0036 (307-466)||(2073-2232)
[»] scaffold0040 (1 HSPs)
scaffold0040 (340-489)||(55755-55902)
[»] scaffold0991 (1 HSPs)
scaffold0991 (339-410)||(2940-3012)
[»] scaffold0568 (1 HSPs)
scaffold0568 (429-489)||(696-756)


Alignment Details
Target: chr2 (Bit Score: 287; Significance: 1e-161; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 44 - 511
Target Start/End: Complemental strand, 14773353 - 14772881
Alignment:
Q  44 aaacacgggcataaatgctcttaaattatctaccaaagaagtttttgcgataacaccgcgagttgaatttatacatttgtgggtatgagtaaggccggaa 143  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14773353 aaacacgggcataaatgcttataaattatctaccaaagaagtttttgcgataacaccgcgagttgaatttatacatttgtgggtatgagtaaggccggaa 14773254  T
Q  144 tagagtgacatgtaaaggaacttaatgttggtcaactaaatgtctatgtaattacataattgccttagaccctc--ggagggtctta---atttaagacc 238  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||    |||||||||   |||||||| |    
T  14773253 tagagtgacatgtaaaggaacttaatgttggtcaacttcatgtctatgtaattacataattgccttagatcctccaaaagggtcttaaacatttaagatc 14773154  T
Q  239 tagtatctattaggtatcctcattgtagtgaannnnnnncaaggttttataagaatacgggtcttatttaagacccccaactttaagcgggccccgcacg 338  Q
    |  ||||||||||||||| |||||| ||||||       ||| || ||||||||||   ||||||||||||||||| |||||||||||||| || |||||    
T  14773153 tgatatctattaggtatcttcattggagtgaatttttttcaaagtcttataagaattatggtcttatttaagaccctcaactttaagcggggcctgcacg 14773054  T
Q  339 tttttaatattaaaaaattgaagtgcagtgtataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgat 438  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||| |||||||  ||    
T  14773053 tttttaatattaaaaaattgaaatgcagtgtataaagttattgatagttgattaatgagtcccatttaagaactttgtgtgagatctgtgttggaggaat 14772954  T
Q  439 tgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaac 511  Q
    ||||| |||||||| ||||| | |||||| ||||||||||| |||||||||| ||||||||| ||||||||||    
T  14772953 tgagtacttattaggtactattgttaaaaaattataaatgaatgatgtgtacgcgtgagacccatttaagaac 14772881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 371 - 521
Target Start/End: Original strand, 9583170 - 9583320
Alignment:
Q  371 taaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatat 470  Q
    |||||||||||| | |||||||||| |||| ||||||||||| ||||| ||||||| ||| |||||||||||||||||||||||||||||||||||| ||    
T  9583170 taaagttattgacaattgattagtgggtccaatttaagaactttgtgtgagatctgagtttgagtgattgagtgcttattagatactactattaaaaaat 9583269  T
Q  471 tataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaatag 521  Q
    ||||||| ||||||| |||||||||||||  ||||||||||| ||||||||    
T  9583270 tataaataagtgatgcgtacacgtgagactcatttaagaacccaaaaatag 9583320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 297 - 508
Target Start/End: Original strand, 11921897 - 11922109
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    |||||||| |||||||||||||  ||||||||| | | |||  ||||||||||||||||||  | |  | || ||||||||||||| ||||||||||||     
T  11921897 gggtcttacttaagacccccaatcttaagcgggactcacacacttttaatattaaaaaattagaatctaatgatataaagttattggtagttgattagta 11921996  T
Q  396 agtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtg 495  Q
     |||||||||||||| | ||||| |||| ||||||||||  ||||||||||| |||| |||||||||||||| ||||||||||||| |||||||||||||    
T  11921997 ggtcccatttaagaaatttgtgtgagatttgggttggaggaattgagtgctttttaggtactactattaaaaaattataaatgagtaatgtgtacacgtg 11922096  T
Q  496 agacctatttaag 508  Q
    ||||| |||||||    
T  11922097 agacccatttaag 11922109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 297 - 507
Target Start/End: Complemental strand, 6711043 - 6710831
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaa-ttgaagtgcagtg-tataaagttattgatagttgattagt 394  Q
    |||| ||| ||||||||||||  ||||| |||  || |||| ||| ||||||||||||| || || || | || |||||||||||||||||||||||| |    
T  6711043 gggttttacttaagacccccacttttaaacggaacctgcacttttataatattaaaaaaattaaaatgtaatgatataaagttattgatagttgattaat 6710944  T
Q  395 gagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgt 494  Q
       | | ||||||||||| ||||| |||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  6710943 tgattctatttaagaactttgtgtgagatctaggttggagtgactgagtgcttattagatactactattaaaaaattataaatgagtgatctgtacacgt 6710844  T
Q  495 gagacctatttaa 507  Q
    |||||| ||||||    
T  6710843 gagacccatttaa 6710831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 299 - 518
Target Start/End: Original strand, 26312428 - 26312646
Alignment:
Q  299 gtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtgt-ataaagttattgatagttgattagtgag 397  Q
    |||||| |||||||||||||  ||||||||||| | | |  || |||||||||||||| ||| || | ||  |||||||||||| ||||||||||||| |    
T  26312428 gtcttacttaagacccccaatcttaagcgggccacactc--ttctaatattaaaaaatagaaatgtaatgacataaagttattggtagttgattagtggg 26312525  T
Q  398 tcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgag 497  Q
    | | |||||| || | ||||| ||||||| |||||||  |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |    
T  26312526 ttctatttaataaatttgtgtgagatctgagttggaggaattgagtgcttattaggtactactattaaaaaattataaatgagtgatgtgtacacgtgtg 26312625  T
Q  498 acctatttaagaacctaaaaa 518  Q
    |||  |||||| ||| |||||    
T  26312626 acccgtttaagtacccaaaaa 26312646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 368 - 525
Target Start/End: Complemental strand, 37347939 - 37347778
Alignment:
Q  368 gtataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat----ctgggttggagtgattgagtgcttattagatactactatt 463  Q
    ||||||||||||||| | |||||| ||  |||  ||||||||||| ||||| ||||    ||||||||||| |||||| | ||||||||||| |||||||    
T  37347939 gtataaagttattgacacttgatttgtaggtcatatttaagaactttgtgtgagatgatgctgggttggagggattgaattcttattagatattactatt 37347840  T
Q  464 aaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaatagatat 525  Q
    |||| ||||||||| | |||||||||||||||||| | ||||||||||| ||||||||||||    
T  37347839 aaaaaattataaataaatgatgtgtacacgtgagatccatttaagaacccaaaaatagatat 37347778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 369 - 521
Target Start/End: Original strand, 34375075 - 34375226
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctg-ggttggagtgattgagtgcttattagatactactattaaaa 467  Q
    |||||||||||||||||||||||| || |||||||||||||  | | ||  ||||||  |||||||| |||||| | |||||||| ||||||||||||||    
T  34375075 tataaagttattgatagttgattaatgggtcccatttaagatttttttg--agatcttaggttggagggattgaattcttattaggtactactattaaaa 34375172  T
Q  468 tattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaatag 521  Q
     ||||||||| ||||||||||||| |||||| ||||||||| | | ||||||||    
T  34375173 aattataaataagtgatgtgtacatgtgagatctatttaagtatccaaaaatag 34375226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 340 - 493
Target Start/End: Complemental strand, 36887697 - 36887542
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaaga-tctgggttggagtga 437  Q
    ||||||||||||||||||||| |||| || |||||| ||||||||||||||||||||  || |||||||||| | | ||| ||| |||| | || || ||    
T  36887697 ttttaatattaaaaaattgaaatgcaatgatataaatttattgatagttgattagtggatctcatttaagaattttttgtgagactctgcgctgaaggga 36887598  T
Q  438 ttgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacg 493  Q
     |||||  ||||||||||||| ||||||||  |||||||| |||||||||||||||    
T  36887597 ctgagttattattagatactattattaaaaatttataaataagtgatgtgtacacg 36887542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 340 - 508
Target Start/End: Original strand, 9733647 - 9733815
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtga 437  Q
    ||||||||||||||| ||||| || || | |||||| |||||| ||||||||| || ||||||||||||||| ||| ||| |||| ||| |||||||  |    
T  9733647 ttttaatattaaaaa-ttgaaatgtagagatataaaattattgctagttgattggtaagtcccatttaagaattgt-tgtgagatgctgagttggaggaa 9733744  T
Q  438 ttgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaag 508  Q
    |||||| |||||||||||||| |||||||   |||||||| ||||||||||||||||| || | |||||||    
T  9733745 ttgagttcttattagatactattattaaagagttataaataagtgatgtgtacacgtgtgatccatttaag 9733815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 306 - 507
Target Start/End: Complemental strand, 16118075 - 16117871
Alignment:
Q  306 ttaagacccccaact-ttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccat 403  Q
    ||||||||||||| | ||||| ||| | ||||| |||||||||||||||||| |   |  | || ||||||||||||||||||||||| |||  | ||||    
T  16118075 ttaagacccccaaatcttaagtgggactcgcacctttttaatattaaaaaatggttatataatgatataaagttattgatagttgatttgtggataccat 16117976  T
Q  404 ttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagaccta 502  Q
    ||| | | | ||||| |||| |  ||||||||  |||||||||||||||| || |  |||||||| |||||||||||||||| ||||||||||||||| |    
T  16117975 ttatggaatatgtgtgagatgcatggttggaggaattgagtgcttattaggtattgatattaaaaaattataaatgagtgatatgtacacgtgagaccca 16117876  T
Q  503 tttaa 507  Q
    |||||    
T  16117875 tttaa 16117871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 26297070 - 26297184
Alignment:
Q  299 gtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgag 397  Q
    ||||||||||| ||| ||||||||||||||| ||| |||   |||||||||||||||||||| ||  ||| ||||||||||||||||||||||||  |      
T  26297070 gtcttatttaacacctccaactttaagcggggcccacacacatttaatattaaaaaattgaaatgtggtgatataaagttattgatagttgattatcgga 26297169  T
Q  398 tcccatttaagaact 412  Q
    |||||||||||||||    
T  26297170 tcccatttaagaact 26297184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 370 - 500
Target Start/End: Original strand, 36267001 - 36267140
Alignment:
Q  370 ataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagata--------ctact 460  Q
    |||||||||||||||| ||||||||| ||| |||||||||| |  |||| |||| |||||||| || |||| ||| |||||||||||        |||||    
T  36267001 ataaagttattgatagctgattagtgggtctcatttaagaaattcgtgtgagatgctgggttgaagagattaagtacttattagatactactaatctact 36267100  T
Q  461 attaaaatattataaatgagtgatgtgtacacgtgagacc 500  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  36267101 attaaaaaattataaatgagtgatgtgtacacgtgcgacc 36267140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 428 - 519
Target Start/End: Original strand, 15269282 - 15269373
Alignment:
Q  428 gttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaat 519  Q
    ||||||| |||||| | ||||||||  ||||||||||||| ||||||||||||| ||||||||| |||||||| ||||||| ||| ||||||    
T  15269282 gttggagggattgaatacttattaggcactactattaaaaaattataaatgagtaatgtgtacatgtgagacccatttaagtaccgaaaaat 15269373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 369 - 466
Target Start/End: Original strand, 18970022 - 18970120
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaaga-tctgggttggagtgattgagtgcttattagatactactattaaa 466  Q
    |||||||||||| |||||||||||||||||  |||||||||| | ||||| |||  ||| |||| || ||||||||| ||||||| |||||||||||||    
T  18970022 tataaagttattaatagttgattagtgagtttcatttaagaaatttgtgtgagaggctgagttgaagagattgagtgtttattaggtactactattaaa 18970120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 437
Target Start/End: Original strand, 45135717 - 45135855
Alignment:
Q  299 gtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgag 397  Q
    |||||| |||||||| |||  |||||||| | |||||||  ||||||||||||| || |||| |  | || ||||||||||||||||||||||| ||| |    
T  45135717 gtcttacttaagacctccacttttaagcgagacccgcactcttttaatattaaataactgaaatataatgatataaagttattgatagttgatttgtggg 45135816  T
Q  398 tcccatttaagaactgtgtgtaagatctgggttggagtga 437  Q
    | |||||||| |||| ||| | | ||||||||||||||||    
T  45135817 t-ccatttaaaaactttgtatgatatctgggttggagtga 45135855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 508
Target Start/End: Complemental strand, 32887730 - 32887562
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgat 438  Q
    |||||||||||||||||| || || | |  |||||||||||| ||||||||||||||  |   |||||| || | | ||| | |||||| |||||| |||    
T  32887730 ttttaatattaaaaaattaaaatgtaataatataaagttatttatagttgattagtggattt-atttaaaaaatttatgtgatatctggattggagagat 32887632  T
Q  439 tgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaag 508  Q
    ||| ||||||||||  || |||||||||| ||||||||||| || ||| ||||||| | | |||||||||    
T  32887631 tgaatgcttattaggcaccactattaaaaaattataaatgaatgttgtatacacgtaaaatctatttaag 32887562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 477
Target Start/End: Original strand, 5038737 - 5038848
Alignment:
Q  369 tataaagttattgatagttgattagtgagt--cccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaa 465  Q
    |||||| |||||||||||||||||||| ||  | || ||||||| | ||||| |||| | ||||||||| |||||| |||||||||  ||||| ||||||    
T  5038737 tataaaattattgatagttgattagtgggtcacacaattaagaaatttgtgtgagatgccgggttggagagattgaatgcttattaattactattattaa 5038836  T
Q  466 aatattataaat 477  Q
    || |||||||||    
T  5038837 aaaattataaat 5038848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 430 - 485
Target Start/End: Complemental strand, 8798734 - 8798679
Alignment:
Q  430 tggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatg 485  Q
    ||||| |||||| ||||||||||||| || |||||||| |||||||||||||||||    
T  8798734 tggagggattgactgcttattagatattattattaaaaaattataaatgagtgatg 8798679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 339 - 519
Target Start/End: Original strand, 28857070 - 28857255
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagtg-tataaagttattgata---gttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttgga 433  Q
    |||||||||||||||||||||  ||  ||  |||||||||||| |||   |||||||||| ||||  ||||||||| | |||||||||| ||||||||||    
T  28857070 tttttaatattaaaaaattgatatgtggtaatataaagttattaatactagttgattagtaagtcttatttaagaaatttgtgtaagatgctgggttgga 28857169  T
Q  434 gtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaat 519  Q
      |||| | | |||||||  || ||||| ||||| ||||||||| | | ||||||| | || ||||| ||||||| ||| ||||||    
T  28857170 aggattaaattcttattaagtattactactaaaaaattataaataaattatgtgtataagtaagacccatttaagtaccaaaaaat 28857255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 419
Target Start/End: Original strand, 40999631 - 40999754
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    |||||| | ||||||||| |||  ||||| ||| ||| ||| | ||||||||||||| |||||| |  | || ||||||||||||||| |||||||||||    
T  40999631 gggtctcacttaagaccctcaatcttaagtgggacccacacttgtttaatattaaaagattgaaatataatgatataaagttattgatggttgattagtg 40999730  T
Q  396 agtcccatttaagaactgtgtgta 419  Q
     || ||||||||||| | ||||||    
T  40999731 ggttccatttaagaaatttgtgta 40999754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 507
Target Start/End: Complemental strand, 21455123 - 21455045
Alignment:
Q  429 ttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaa 507  Q
    ||||||||| |  ||||||||||| ||  | |||||||| |||||||| ||||||||||||||| ||| ||||||||||    
T  21455123 ttggagtgacttcgtgcttattaggtataattattaaaaaattataaaagagtgatgtgtacacatgaaacctatttaa 21455045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 454 - 508
Target Start/End: Complemental strand, 31050121 - 31050067
Alignment:
Q  454 tactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaag 508  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||  |||||||    
T  31050121 tactactattaaaaaattataaataagtgatgtgtacatgtgagactcatttaag 31050067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 436 - 517
Target Start/End: Original strand, 3668932 - 3669013
Alignment:
Q  436 gattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaa 517  Q
    |||||||| |||||||  |||||||||||||| ||||||||| ||| || | ||||||||||||  ||||||  ||||||||    
T  3668932 gattgagtacttattaattactactattaaaaaattataaattagtaatatatacacgtgagactcatttaaatacctaaaa 3669013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 459 - 508
Target Start/End: Complemental strand, 14332097 - 14332048
Alignment:
Q  459 ctattaaaatattataaatgagtgatgtgtacacgtgagacctatttaag 508  Q
    |||| |||| |||||||||||||||||||||||||||||| | |||||||    
T  14332097 ctatcaaaaaattataaatgagtgatgtgtacacgtgagatccatttaag 14332048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 429 - 494
Target Start/End: Complemental strand, 23394330 - 23394265
Alignment:
Q  429 ttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgt 494  Q
    |||||| ||||||||||||||| |||| |  |||||||| |||||||| || ||||||||||||||    
T  23394330 ttggagcgattgagtgcttatttgatattgttattaaaaaattataaaagaatgatgtgtacacgt 23394265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 424 - 477
Target Start/End: Original strand, 30465343 - 30465396
Alignment:
Q  424 ctgggttggagtgattgagtgcttattagatactactattaaaatattataaat 477  Q
    |||||||| || |||||| | ||||||||||||||||||||||| |||||||||    
T  30465343 ctgggttgaagggattgaattcttattagatactactattaaaaaattataaat 30465396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 395
Target Start/End: Original strand, 34234879 - 34234936
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    |||||||||||||||||||||| || | || |||||||||||||||| ||||||||||    
T  34234879 tttttaatattaaaaaattgaaatgtaatgatataaagttattgataattgattagtg 34234936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 13022853 - 13022793
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagt 398  Q
    |||||||||||||||||||||| || | |  |||||| |||||||||||||||||||||||    
T  13022853 tttttaatattaaaaaattgaaatgtaataatataaatttattgatagttgattagtgagt 13022793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 14766217 - 14766185
Alignment:
Q  14 aaaagatccaattgaatggcgtaattacataaa 46  Q
    |||||||||||||||||||||||||||||||||    
T  14766217 aaaagatccaattgaatggcgtaattacataaa 14766185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 460 - 508
Target Start/End: Complemental strand, 21848204 - 21848156
Alignment:
Q  460 tattaaaatattataaatgagtgatgtgtacacgtgagacctatttaag 508  Q
    |||||||| ||||||||| ||||||||||||||||| || |||||||||    
T  21848204 tattaaaaaattataaataagtgatgtgtacacgtgggatctatttaag 21848156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 476
Target Start/End: Complemental strand, 65522 - 65383
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtg 436  Q
    |||||||||| ||||||||||| || | || || ||| ||||||||||||||||| ||  || ||||||| || | ||||| ||||  ||| |||||| |    
T  65522 tttttaatataaaaaaattgaaatgtaatgatacaaacttattgatagttgattaatggttctcatttaataaatttgtgtgagatgttggattggaggg 65423  T
Q  437 attgagtgcttattagatactactattaaaatattataaa 476  Q
    ||| |||| ||||||  |||||| ||||||| ||||||||    
T  65422 attaagtgtttattatgtactacaattaaaaaattataaa 65383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 498
Target Start/End: Original strand, 4634045 - 4634112
Alignment:
Q  431 ggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgaga 498  Q
    ||||||||||||| |||||||| ||||| |||||||| |||||| |  | ||||||||||| ||||||    
T  4634045 ggagtgattgagttcttattaggtactattattaaaaaattatacaaaaatgatgtgtacatgtgaga 4634112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 437 - 496
Target Start/End: Complemental strand, 4755335 - 4755276
Alignment:
Q  437 attgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtga 496  Q
    |||||||  |||||||||| || |||||||| |||||||||||||||| |||| ||||||    
T  4755335 attgagtatttattagataataatattaaaaaattataaatgagtgatatgtagacgtga 4755276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 518
Target Start/End: Complemental strand, 3948997 - 3948936
Alignment:
Q  457 tactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaa 518  Q
    |||||||||||||||||||| || |||||||||||| |  || ||||||||| ||| |||||    
T  3948997 tactattaaaatattataaacgaatgatgtgtacacatatgatctatttaagtaccaaaaaa 3948936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 507
Target Start/End: Complemental strand, 41068829 - 41068756
Alignment:
Q  435 tgattgagtgcttattaga-tactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaa 507  Q
    ||||||||||||||||  | |||||||||| ||| ||||||||||| |||||| |||||||  |||| ||||||    
T  41068829 tgattgagtgcttatttaagtactactatttaaaaattataaatgaatgatgtatacacgttggacccatttaa 41068756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 496
Target Start/End: Original strand, 44677656 - 44677709
Alignment:
Q  443 tgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtga 496  Q
    ||||||| || || ||||||||||| ||||||||| || |||||||||||||||    
T  44677656 tgcttatcaggtattactattaaaaaattataaataagagatgtgtacacgtga 44677709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 477
Target Start/End: Complemental strand, 34821004 - 34820868
Alignment:
Q  343 taatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattg 440  Q
    ||||||||||||||| || || | || |||||||||| ||||||||||||  | ||| || |||||||| | ||||| | || ||| ||||||| ||||     
T  34821004 taatattaaaaaattaaaatgtaatgatataaagttactgatagttgattgataagttccgtttaagaaatttgtgtgaaatgctgagttggagggatta 34820905  T
Q  441 agtgcttattagatactactattaaaatattataaat 477  Q
    |||| ||| || ||| ||||||| ||| |||||||||    
T  34820904 agtgtttaatatatattactatttaaaaattataaat 34820868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 1e-70; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 297 - 519
Target Start/End: Original strand, 43822730 - 43822952
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    ||||||||||||||||||| |||||||| |||| ||  |||  ||||||||||||||||||||| || |||| |||||||||||||||||||||||||||    
T  43822730 gggtcttatttaagacccc-aactttaaacgggacctacactcttttaatattaaaaaattgaaatgtagtgatataaagttattgatagttgattagtg 43822828  T
Q  396 agtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtg 495  Q
     |||||||||||||||| ||||| |||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  43822829 ggtcccatttaagaactttgtgtgagatctgggttggaggaattgagtgcttattagatactactattaaaaaattataaatgagtgatgtgtacgcgtg 43822928  T
Q  496 agacctatttaagaacctaaaaat 519  Q
     |||| ||||||||||| ||||||    
T  43822929 ggacccatttaagaaccaaaaaat 43822952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 297 - 519
Target Start/End: Original strand, 13983991 - 13984214
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    ||||||||||||||||| ||||||||||||||   |  |||| ||||||||||||||||||||| || |||| ||||||||||||||||||||||||||     
T  13983991 gggtcttatttaagacctccaactttaagcggagacaacacgcttttaatattaaaaaattgaaatgtagtgatataaagttattgatagttgattagta 13984090  T
Q  396 agtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtg 495  Q
     ||| |||||||||| | ||||| ||||||||||| ||| |||||||| ||||||||||||||||||||||| |||||||||| ||||||||||  ||||    
T  13984091 ggtctcatttaagaattttgtgtgagatctgggttagagagattgagtacttattagatactactattaaaaaattataaatgtgtgatgtgtatgcgtg 13984190  T
Q  496 agacctatttaagaacctaaaaat 519  Q
     |||| |||||||||| |||||||    
T  13984191 ggacccatttaagaacttaaaaat 13984214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 278 - 519
Target Start/End: Original strand, 27544306 - 27544548
Alignment:
Q  278 caaggttttataagaatacgggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtgtat-aaagt 376  Q
    ||||||||||||||| |  ||||||||||||||||||||||  ||||| ||| ||| |||  ||||||||||||||| ||||| || | ||  | |||||    
T  27544306 caaggttttataagactcggggtcttatttaagacccccaatcttaagtgggacccacactcttttaatattaaaaagttgaaatgtaatgacttaaagt 27544405  T
Q  377 tattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaa 476  Q
    || ||||| ||| ||| || ||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||| |||||||| ||||||||    
T  27544406 tagtgataattgtttaatgggtctcatttaagaactgtgtgtcagatctgggttggagggattgagtgcttattagatgctattattaaaaaattataaa 27544505  T
Q  477 tgagtgatgtgtacacgtgagacctatttaagaacctaaaaat 519  Q
    |||||||||||||||| ||||||| ||||||| ||| ||||||    
T  27544506 tgagtgatgtgtacacatgagacccatttaagtaccaaaaaat 27544548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 320 - 523
Target Start/End: Original strand, 23333736 - 23333944
Alignment:
Q  320 tttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgt 418  Q
    ||||||||||  ||| || |||||||||||||||||||||| |  | |  |||||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  23333736 tttaagcgggatccgtacttttttaatattaaaaaattgaaatataataatataaagttattgatatttgatcagtgagtctcatttaagaactgtgtgt 23333835  T
Q  419 aagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagt----gatgtgtacacgtgagacctatttaagaaccta 514  Q
     ||||||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||    |||||||| |||| |||||||||||||||||||    
T  23333836 gagatctgggttggagtgattgagtgcttattaagtactattattaaaaaattataaatgagtgatcgatgtgtatacgtaagacctatttaagaaccta 23333935  T
Q  515 aaaatagat 523  Q
    |||||||||    
T  23333936 aaaatagat 23333944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 297 - 519
Target Start/End: Original strand, 25813690 - 25813912
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    ||||||||||||||||||||||||||||||||| |  ||| | ||||||||||||||| || || || |||| |||||| ||||||||||||||||||||    
T  25813690 gggtcttatttaagacccccaactttaagcggggcttgcaggcttttaatattaaaaatttaaa-tgtagtgatataaaattattgatagttgattagtg 25813788  T
Q  396 agtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtg 495  Q
     ||| |||||||||||| || || ||||||||||||||| ||  |||| |||||||  |||| ||||||||| |||||||||||||||||||||| ||||    
T  25813789 ggtctcatttaagaactttgcgtgagatctgggttggagggaccgagtacttattatgtacttctattaaaaaattataaatgagtgatgtgtacgcgtg 25813888  T
Q  496 agacctatttaagaacctaaaaat 519  Q
     |||||||||||||||| ||||||    
T  25813889 ggacctatttaagaacccaaaaat 25813912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 298 - 511
Target Start/End: Original strand, 36166846 - 36167059
Alignment:
Q  298 ggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtga 396  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||| || || |||| ||||||||||||||||||| ||||||||    
T  36166846 ggtcttatttaagacccccaactttaagcggggcccgcacgcttttaatatgaaaaaattaaaatgtagtgatataaagttattgatagtttattagtga 36166945  T
Q  397 gtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtga 496  Q
    |||| ||||||||| | ||||| | || | ||||||||  |||||||  ||||||| |||||| ||||||| ||||||||| | ||||||||||| |||     
T  36166946 gtccaatttaagaattttgtgtgacatttaggttggaggaattgagtaattattaggtactac-attaaaaaattataaataaatgatgtgtacatgtgg 36167044  T
Q  497 gacctatttaagaac 511  Q
    |||| ||||||||||    
T  36167045 gacccatttaagaac 36167059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 340 - 499
Target Start/End: Complemental strand, 32851887 - 32851727
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgat 438  Q
    ||||||||||||||||||||| || |||| |||||| |||||||||||||||||||| ||||||||||||||||  |||  ||||||||| |||||  ||    
T  32851887 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtgtgtcccatttaagaacttcgtgggagatctgggatggaggaat 32851788  T
Q  439 tgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagac 499  Q
    ||| ||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||    
T  32851787 tgattgcttattagatactactattaaaaaattgtaaatgagtgatgtgtacgcgtgagac 32851727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 297 - 512
Target Start/End: Complemental strand, 47783824 - 47783608
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    |||||||| ||||||||||||  |||||||||| | | |||  | ||||||||||||||||||| |  | || |||||| ||||||||||||||||| |     
T  47783824 gggtcttacttaagacccccacttttaagcgggactcacactctattaatattaaaaaattgaaatataatgatataaaattattgatagttgattaata 47783725  T
Q  396 agtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtg 495  Q
     || ||||||||||||| ||||| |||| || ||||||||||||||||| |||||| |||||| |||||||| ||||||||  | |||||||||||||||    
T  47783724 ggttccatttaagaactttgtgtgagatttgagttggagtgattgagtgtttattaaatactattattaaaaaattataaacaaatgatgtgtacacgtg 47783625  T
Q  496 agacctatttaagaacc 512  Q
    ||||| |||||||||||    
T  47783624 agacccatttaagaacc 47783608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 369 - 511
Target Start/End: Complemental strand, 32451855 - 32451714
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaat 468  Q
    |||||||||||||||| || ||||||| ||| |||||||||||| | ||| ||||||| |||||||||||||| |||||||||| || |||||||||||     
T  32451855 tataaagttattgataatttattagtgggtctcatttaagaacttt-tgtgagatctgagttggagtgattgaatgcttattaggtattactattaaaaa 32451757  T
Q  469 attataaatgagtgatgtgtacacgtgagacctatttaagaac 511  Q
    ||||||||| ||||||||||| |||||||||| ||||||||||    
T  32451756 attataaattagtgatgtgtaaacgtgagacccatttaagaac 32451714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 339 - 508
Target Start/End: Complemental strand, 52353917 - 52353747
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtga 437  Q
    |||||||||||||||||||||| || | || ||||||||||||||||||||||||||| || | ||||||||| | ||||| ||||   | |||||| ||    
T  52353917 tttttaatattaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgggttctatttaagaaatttgtgtgagatgctgcttggaggga 52353818  T
Q  438 ttgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaag 508  Q
    | ||||||||||||| |||| ||||||||| ||||||||| ||||||||||||||||| |||| |||||||    
T  52353817 tcgagtgcttattaggtactgctattaaaaaattataaattagtgatgtgtacacgtgggacccatttaag 52353747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 299 - 452
Target Start/End: Complemental strand, 40287154 - 40287002
Alignment:
Q  299 gtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtgtataaagttattgatagttgattagtgagt 398  Q
    |||||| ||||||||| |||||||||||||| ||| ||| ||||||||||||||||||| || || | || ||||| |||||||||||||||||| | ||    
T  40287154 gtcttacttaagacccacaactttaagcgggacccacacctttttaatattaaaaaattaaaatgtaatg-ataaaattattgatagttgattagcgggt 40287056  T
Q  399 cccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattag 452  Q
    ||||||||| |||| ||||| ||||||||||||||| |||| ||||||||||||    
T  40287055 cccatttaataactttgtgtgagatctgggttggagggatttagtgcttattag 40287002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 369 - 495
Target Start/End: Original strand, 11120578 - 11120704
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaat 468  Q
    |||||||||||||||||||||||||||  |   ||||||||||| ||||| ||||||| |||||||| |||||||| |||||||||||||||||||||      
T  11120578 tataaagttattgatagttgattagtggattgtatttaagaactttgtgtgagatctgcgttggagtaattgagtgtttattagatactactattaaaga 11120677  T
Q  469 attataaatgagtgatgtgtacacgtg 495  Q
    ||||||||||||||||||||| |||||    
T  11120678 attataaatgagtgatgtgtatacgtg 11120704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 300 - 498
Target Start/End: Original strand, 42831601 - 42831801
Alignment:
Q  300 tcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagt 398  Q
    ||||||||||||| ||||  |||||||||| |||||||  |||||||||||||||||| || || | || |||||| ||||||||||||||||| ||  |    
T  42831601 tcttatttaagacacccacttttaagcgggacccgcacacttttaatattaaaaaattaaaatgtaatgatataaaattattgatagttgattaatggat 42831700  T
Q  399 cccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgag 497  Q
    | |||||||||| | | ||| |||| || ||||||||  ||| ||| |||||||| |||||||||||||| ||||||||||||| || |||||| |||||    
T  42831701 ctcatttaagaaatttttgtgagatgctaggttggaggaatttagttcttattaggtactactattaaaaaattataaatgagtaatatgtacatgtgag 42831800  T
Q  498 a 498  Q
    |    
T  42831801 a 42831801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 432 - 519
Target Start/End: Original strand, 38902053 - 38902140
Alignment:
Q  432 gagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaat 519  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||| ||||||    
T  38902053 gagtgatcgagtgcttattaggtactactattaaaaaattataaatgagtgatatgtacacgtgagacccatttaagaacccaaaaat 38902140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 297 - 518
Target Start/End: Complemental strand, 43675368 - 43675143
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    |||||||| ||||||||| ||| |||||| ||  | ||||  ||||||||||| |||||||||  |||| || ||||||||| ||||||||| ||| ||     
T  43675368 gggtcttacttaagaccctcaattttaagtggaactcgcatttttttaatattgaaaaattgatatgcaatgatataaagttgttgatagttaatttgtt 43675269  T
Q  396 agtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgc--ttattagatactactattaaaatattataaatgagtgatgtgtacac 492  Q
     ||||| ||||| || | ||||||||||  |||||||||| ||||||   |  |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  43675268 ggtcccgtttaaaaaatttgtgtaagatattgggttggagggattgaactcttttattaaatactacaattaaaaaattataaatgagtgatgtgtacac 43675169  T
Q  493 gtgagacctatttaagaacctaaaaa 518  Q
     ||| ||||||||||| ||| |||||    
T  43675168 atgaaacctatttaagtaccaaaaaa 43675143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 339 - 507
Target Start/End: Complemental strand, 49003493 - 49003324
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagt-gtataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtg 436  Q
    ||||||||||||||||||||   || | | |||||||||||||||||||||||| ||| |||  ||||||||| | ||||| |||| || |||||||| |    
T  49003493 tttttaatattaaaaaattgttatgtaattgtataaagttattgatagttgatttgtgggtctaatttaagaattttgtgtgagatgctcggttggagag 49003394  T
Q  437 attgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaa 507  Q
    ||||| | |||||||| || ||||||||||| |||||||| |||| ||||||||| |||||||||||||||    
T  49003393 attgaatacttattaggtattactattaaaaaattataaa-gagtaatgtgtacatgtgagacctatttaa 49003324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 339 - 508
Target Start/End: Complemental strand, 51504663 - 51504491
Alignment:
Q  339 tttttaatattaaaaaattgaag-tgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatc-tgggttggagt 435  Q
    ||||||||||||||||||||||  ||  ||| |||||| ||||| ||||||||| |||| |||| |||||||||   |||||  |||  ||||||||||     
T  51504663 tttttaatattaaaaaattgaaaatgttgtgatataaaattattaatagttgataagtgggtcctatttaagaaacttgtgtgggatgatgggttggagg 51504564  T
Q  436 gattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaag 508  Q
     ||||||| |||| ||  |||||||||||||| |||||||||||||||||| ||||||||||||| |||||||    
T  51504563 aattgagtacttaatacgtactactattaaaaaattataaatgagtgatgtatacacgtgagacccatttaag 51504491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 306 - 507
Target Start/End: Original strand, 36297945 - 36298148
Alignment:
Q  306 ttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatt 404  Q
    |||||||| |||  |||||||| | ||| |||  ||||||||||||||||||||| || | || |||||| |||||||||||||||||||| | ||||||    
T  36297945 ttaagacctccacttttaagcgagaccctcactattttaatattaaaaaattgaaatgtaatgatataaaattattgatagttgattagtg-gccccatt 36298043  T
Q  405 taagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactatt-aaaatattataaatgagtgatgtgtacacgtgagaccta 502  Q
    ||||||   | |||  ||| || ||||| || |||||||| ||||||| |||||| |||| |||| ||||||||| ||||| ||||||| |||||| | |    
T  36298044 taagaaacttttgtgtgatactaggttgtagggattgagttcttattaaatactattattaaaaaaattataaataagtgacgtgtacatgtgagatcca 36298143  T
Q  503 tttaa 507  Q
    |||||    
T  36298144 tttaa 36298148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 369 - 519
Target Start/End: Original strand, 43506284 - 43506436
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctg-ggttggagtgattgagtgcttattagatactactattaaaa 467  Q
    |||||||||||||||||||||||||||||||  |||||| || | ||||| | || |  |||||||| ||||||||||||| ||  ||||| ||||||||    
T  43506284 tataaagttattgatagttgattagtgagtcaaatttaataaatttgtgtgaaatgtttggttggagggattgagtgcttactaagtactaatattaaaa 43506383  T
Q  468 ta-ttataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaat 519  Q
     | |||||||||| |||||| ||||| ||  ||||||||||| ||| ||||||    
T  43506384 aaattataaatgaatgatgtctacacatgtaacctatttaagtaccaaaaaat 43506436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 384 - 519
Target Start/End: Original strand, 47364363 - 47364498
Alignment:
Q  384 agttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtg 482  Q
    |||||||||||| ||| |||||||||| | ||||| |||| ||  |||| ||||||| |||  |||||| ||||||||||| ||| |||||||||||||     
T  47364363 agttgattagtgtgtctcatttaagaaatttgtgtgagatgctcagttgaagtgattaagtatttattatatactactatttaaaaattataaatgagta 47364462  T
Q  483 atgtgtacacgtgagacctatttaagaacctaaaaat 519  Q
    ||||| |||||||||||| ||||||| | ||||||||    
T  47364463 atgtgaacacgtgagacc-atttaagtatctaaaaat 47364498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 491
Target Start/End: Complemental strand, 51061750 - 51061595
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtg 436  Q
    ||||||| |||||||||||||| || | || || ||||||||||||||| |||||| | |||||||||||||| | ||||||| || || |||||||| |    
T  51061750 tttttaaaattaaaaaattgaaatgtaatgatagaaagttattgatagtagattagcgggtcccatttaagaaatttgtgtaaaatactaggttggagag 51061651  T
Q  437 attgagtgcttattagatactactatt-aaaatattataaatgagtgatgtgtaca 491  Q
    |||||||  ||||||  |||||||||| |||| |||||| || ||||||| |||||    
T  51061650 attgagtatttattaagtactactattaaaaaaattatatataagtgatgcgtaca 51061595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 369 - 489
Target Start/End: Complemental strand, 38601060 - 38600939
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactatt-aaa 466  Q
    |||||||||||||||| |||||||||| |||| |||||| || | ||||| |||| || | ||| || |||||||| ||||||||||| ||||||| |||    
T  38601060 tataaagttattgataattgattagtgggtcc-atttaaaaaatttgtgtgagatgcttgattgaagggattgagtacttattagatattactattaaaa 38600962  T
Q  467 atattataaatgagtgatgtgta 489  Q
    || ||||||||||||||||||||    
T  38600961 attttataaatgagtgatgtgta 38600939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 339 - 498
Target Start/End: Complemental strand, 11241608 - 11241447
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatc-tgggttggagtg 436  Q
    |||||||||||| ||||||||| |  | || |||||||||||||||||||||||||||  | || ||||| || | ||||| | ||  ||| ||||||      
T  11241608 tttttaatattataaaattgaaatataatgatataaagttattgatagttgattagtggataccttttaaaaaatttgtgtgaaattatggattggagga 11241509  T
Q  437 attgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgaga 498  Q
    |||| ||| ||||||  ||||| |||||||| |||||||||||||| |||||| ||||||||    
T  11241508 attgggtgtttattatgtactaatattaaaaaattataaatgagtggtgtgtatacgtgaga 11241447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 498
Target Start/End: Complemental strand, 33780585 - 33780520
Alignment:
Q  433 agtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgaga 498  Q
    ||||||||||||||||||| |||||  |||||||| |||||||| | |||||||||||||||||||    
T  33780585 agtgattgagtgcttattatatactgttattaaaaaattataaaagtgtgatgtgtacacgtgaga 33780520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 466
Target Start/End: Complemental strand, 44665444 - 44665316
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtga 437  Q
    ||||||||||||||||||||| |  | || |||||| ||||||||||||||||||||  |  |||||||||  | ||| | |||| |||| |||||| ||    
T  44665444 ttttaatattaaaaaattgaaatataatgatataaaattattgatagttgattagtgtatttcatttaagagatttgtatgagatactggattggagcga 44665345  T
Q  438 ttgagtgcttattagatactactattaaa 466  Q
    |||||| ||||||||||| ||||||||||    
T  44665344 ttgagtacttattagatattactattaaa 44665316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 429 - 492
Target Start/End: Original strand, 42401086 - 42401149
Alignment:
Q  429 ttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacac 492  Q
    ||||||||| |||||||||||||| ||||  |||||||| |||||||| |||||||||||||||    
T  42401086 ttggagtgactgagtgcttattaggtactgttattaaaaaattataaaagagtgatgtgtacac 42401149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 433 - 479
Target Start/End: Complemental strand, 24555866 - 24555820
Alignment:
Q  433 agtgattgagtgcttattagatactactattaaaatattataaatga 479  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||    
T  24555866 agtgattgaatgcttattagatactactattaaaaaattataaatga 24555820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 429 - 509
Target Start/End: Original strand, 32913944 - 32914024
Alignment:
Q  429 ttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaaga 509  Q
    ||||||||||||||| | |||||||||||| |||||||| ||||||||  | ||||||||| | ||||||||  |||||||    
T  32913944 ttggagtgattgagtacctattagatactattattaaaaaattataaaaaaatgatgtgtatatgtgagacccgtttaaga 32914024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 434 - 508
Target Start/End: Complemental strand, 33326262 - 33326188
Alignment:
Q  434 gtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaag 508  Q
    ||||||||||| |||||| ||| |  |||||||| ||||||||||||||||||| ||||||| |||  |||||||    
T  33326262 gtgattgagtgattattaaatattgttattaaaaaattataaatgagtgatgtgcacacgtgtgactcatttaag 33326188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 437 - 494
Target Start/End: Original strand, 37073759 - 37073816
Alignment:
Q  437 attgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgt 494  Q
    |||||||| ||||||||||||| |||||||| ||||||||| | |||||| |||||||    
T  37073759 attgagtgtttattagatactagtattaaaaaattataaataaatgatgtatacacgt 37073816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 429 - 486
Target Start/End: Complemental strand, 42483744 - 42483687
Alignment:
Q  429 ttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgt 486  Q
    ||||| |||||||||||||||||||||||  |||||||| ||||||||  ||||||||    
T  42483744 ttggaatgattgagtgcttattagatactgttattaaaaaattataaaatagtgatgt 42483687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 370 - 481
Target Start/End: Original strand, 51263217 - 51263327
Alignment:
Q  370 ataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaat 468  Q
    |||||||||||||||||||||||||| ||  |||||||||| | ||||  |||| |||  ||| | |||||||||||| ||||| ||||| |||| |||     
T  51263217 ataaagttattgatagttgattagtgtgtttcatttaagaaatttgtg--agatgctgaattgaaatgattgagtgctcattaggtactattattgaaaa 51263314  T
Q  469 attataaatgagt 481  Q
     ||||||||||||    
T  51263315 tttataaatgagt 51263327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 429 - 509
Target Start/End: Complemental strand, 31206372 - 31206293
Alignment:
Q  429 ttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaaga 509  Q
    |||||||| ||||||  ||||||||||||| |||||||| ||||||||  ||||||||||  | ||||||| |||||||||    
T  31206372 ttggagtggttgagtatttattagatactattattaaaa-attataaaaaagtgatgtgtctatgtgagacttatttaaga 31206293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 429 - 476
Target Start/End: Original strand, 7789797 - 7789844
Alignment:
Q  429 ttggagtgattgagtgcttattagatactactattaaaatattataaa 476  Q
    ||||||||||||||||| ||||| |||||| |||||||| ||||||||    
T  7789797 ttggagtgattgagtgcctattaaatactattattaaaaaattataaa 7789844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 449
Target Start/End: Complemental strand, 11567007 - 11566896
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtga 437  Q
    |||| ||||||||||| |||| || | || |||||||||||||||||||||||| | |||| ||||| |||| | ||||| | || || |||||||  ||    
T  11567007 tttttatattaaaaaaatgaaatgtaatgatataaagttattgatagttgattaataagtctcatttgagaaatttgtgtgatatgctaggttggaagga 11566908  T
Q  438 ttgagtgcttat 449  Q
    ||||||||||||    
T  11566907 ttgagtgcttat 11566896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 410
Target Start/End: Complemental strand, 11570045 - 11569974
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaa 410  Q
    |||| |||||||||||||||| || | || |||||||||||||||||||||||| | |||| ||||| ||||    
T  11570045 tttttatattaaaaaattgaaatgtaatgatataaagttattgatagttgattaataagtctcatttgagaa 11569974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 489
Target Start/End: Original strand, 22680465 - 22680526
Alignment:
Q  428 gttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgta 489  Q
    ||||||| |||| |||  ||||| | ||||||| |||||||| |||||||||||||||||||    
T  22680465 gttggagggattaagtatttattcggtactacttttaaaatactataaatgagtgatgtgta 22680526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 507
Target Start/End: Original strand, 32545055 - 32545119
Alignment:
Q  443 tgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaa 507  Q
    ||||||||||||| |  |||||| | |||||||| |||||||||||||| ||| |||| ||||||    
T  32545055 tgcttattagataatgttattaacaaattataaaagagtgatgtgtacaggtgtgacccatttaa 32545119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 489
Target Start/End: Original strand, 34942476 - 34942520
Alignment:
Q  445 cttattagatactactattaaaatattataaatgagtgatgtgta 489  Q
    ||||||| |||||| |||||||||||| ||||||||| |||||||    
T  34942476 cttattatatactaatattaaaatattttaaatgagttatgtgta 34942520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 9e-59; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 297 - 519
Target Start/End: Complemental strand, 36658059 - 36657836
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    |||||||| ||||||||||||  ||||| |||  |||||||  |||||||||||||| ||| || |  | || |||||| ||||||||||||||||||||    
T  36658059 gggtcttacttaagacccccacttttaaccggaacccgcactattttaatattaaaatattaaaatataatggtataaaattattgatagttgattagtg 36657960  T
Q  396 agtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtg 495  Q
     |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||  |||||||||| ||    
T  36657959 ggtcccatttaagaactttgtgtgagatctgggttggagtgattgagtgcttattagatagtactattaaaaaattataaatgagcaatgtgtacacatg 36657860  T
Q  496 agacctatttaagaacctaaaaat 519  Q
    ||||| ||||||||||| ||||||    
T  36657859 agacccatttaagaacccaaaaat 36657836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 297 - 521
Target Start/End: Complemental strand, 36482177 - 36481952
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    |||||||| ||||||||||||  ||||||||||   |||||  ||||||||||||||||||||| |  | |  |||||||||||||||||||||||||||    
T  36482177 gggtcttacttaagacccccacttttaagcgggaatcgcactcttttaatattaaaaaattgaaatataattatataaagttattgatagttgattagtg 36482078  T
Q  396 agtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtg 495  Q
    | || |||||||||||| ||||| | ||||||||| |||||||||||||||||||| |||||||||||||||||||| || |||||||| ||||||||||    
T  36482077 aatctcatttaagaactttgtgtgatatctgggttagagtgattgagtgcttattaaatactactattaaaatattacaagtgagtgatatgtacacgtg 36481978  T
Q  496 agacctatttaagaacctaaaaatag 521  Q
    | ||||||||||||||  ||||||||    
T  36481977 aaacctatttaagaactcaaaaatag 36481952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 297 - 527
Target Start/End: Original strand, 44441544 - 44441776
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    |||||||||||||||||||||  ||||| |||| ||| |||  |||||||||||||||||||||||| | || |||  |||| |||||||||||||||||    
T  44441544 gggtcttatttaagacccccacttttaatcgggtccctcactcttttaatattaaaaaattgaagtgtaatgatatccagttgttgatagttgattagtg 44441643  T
Q  396 agtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgt 494  Q
     ||| |||||||||| | | ||| |||| |||||||||||  ||||||| |||||||| ||||||  |||||| |||||||||||||||||||||||  |    
T  44441644 ggtctcatttaagaaatttttgtgagatgctgggttggagatattgagttcttattaggtactaccgttaaaaaattataaatgagtgatgtgtacattt 44441743  T
Q  495 gagacctatttaagaacctaaaaatagatatct 527  Q
    |||||| ||||||||||| | ||||| ||||||    
T  44441744 gagacccatttaagaacccagaaataaatatct 44441776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 297 - 499
Target Start/End: Complemental strand, 43302291 - 43302086
Alignment:
Q  297 gggtcttatttaagaccccc--aactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattag 393  Q
    |||||||| |||||||||||  |  ||||||||||  || |||  ||||||||||||||||||||| |  | || |||||||||||||||||||||||||    
T  43302291 gggtcttacttaagacccccctacttttaagcgggatccacactcttttaatattaaaaaattgaaatataatgatataaagttattgatagttgattag 43302192  T
Q  394 tgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacg 493  Q
    || |||||||||||||| | ||||| |||||| | |||||||||||||||  ||||||| |||||||||||||| ||||||||||||| ||||||||| |    
T  43302191 tgggtcccatttaagaattatgtgtgagatctagattggagtgattgagtatttattaggtactactattaaaaaattataaatgagttatgtgtacagg 43302092  T
Q  494 tgagac 499  Q
    ||||||    
T  43302091 tgagac 43302086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 281 - 522
Target Start/End: Complemental strand, 23156427 - 23156185
Alignment:
Q  281 ggttttataagaatacgggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttat 379  Q
    ||||||||||||  | | ||||||  |||||||||||| |||| ||||| || ||||  |||||||||||||||||| || || |||| |||||||||||    
T  23156427 ggttttataagatcatgagtcttacctaagacccccaattttatgcgggacctgcactcttttaatattaaaaaattaaaatgtagtgatataaagttat 23156328  T
Q  380 tgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatga 479  Q
    ||||||||||||| || ||| |||||||||||| ||||| |||||| |||||||| |||| |||||||||||| ||||||||||| || | |||||||      
T  23156327 tgatagttgattaatgggtctcatttaagaactttgtgtgagatctaggttggagggattaagtgcttattagctactactattataaaactataaattg 23156228  T
Q  480 gtgatgtgtacacgtgagacctatttaagaacctaaaaataga 522  Q
     |||||||||| |||  ||||||||||   | |||||||||||    
T  23156227 atgatgtgtacgcgttggacctatttagatatctaaaaataga 23156185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 313 - 518
Target Start/End: Complemental strand, 47841577 - 47841370
Alignment:
Q  313 ccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaac 411  Q
    ||||||||||||| ||| | | ||| |||||||||||||||||||||  ||   || ||||||||||||||||||||||| ||||||| |||||||||||    
T  47841577 ccccaactttaagtgggactcacacctttttaatattaaaaaattgatatgtgatggtataaagttattgatagttgatttgtgagtctcatttaagaac 47841478  T
Q  412 tgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaa 510  Q
    | | ||| |||| || |||||||| |||||||| ||||||| |||||||||||| || ||||||||||||| ||||||||| ||| |||  ||||||| |    
T  47841477 tttatgtgagatgcttggttggagggattgagtacttattaaatactactattacaaaattataaatgagttatgtgtacatgtgggactcatttaagta 47841378  T
Q  511 cctaaaaa 518  Q
    ||||||||    
T  47841377 cctaaaaa 47841370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 305 - 500
Target Start/End: Original strand, 37698450 - 37698643
Alignment:
Q  305 tttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccat 403  Q
    ||||||||||||| ||| | ||||| ||| |||  |||||||||||||||||| || || |||| ||||||||| ||||||||| ||||||| ||  |||    
T  37698450 tttaagaccccca-cttcacgcgggacccacactcttttaatattaaaaaattaaaatgtagtgatataaagttgttgatagtttattagtgggtttcat 37698548  T
Q  404 ttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacc 500  Q
    ||||||| | ||||| |||| |||||||||| ||||||||||||||||| ||||||||||  || ||||||||| |||||||| ||| |||| ||||    
T  37698549 ttaagaattttgtgtgagatttgggttggagggattgagtgcttattaggtactactatt--aacattataaattagtgatgtttacgcgtgggacc 37698643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 340 - 489
Target Start/End: Original strand, 31330390 - 31330541
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatct-gggttggagtga 437  Q
    ||||||||||||||||||||| || | || |||| | |||||||||||||||||||  ||| |||||||||| | ||||| | || | ||||||||| ||    
T  31330390 ttttaatattaaaaaattgaaatgtaatgatatatacttattgatagttgattagtacgtctcatttaagaaatttgtgtgaaatgttgggttggaggga 31330489  T
Q  438 ttgagtgcttattagatactactattaaaatattataaatgagtgatgtgta 489  Q
    ||||||||||||||| |||||| ||||||| |||||||||||||||||||||    
T  31330490 ttgagtgcttattaggtactaccattaaaaaattataaatgagtgatgtgta 31330541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 320 - 522
Target Start/End: Complemental strand, 36656756 - 36656553
Alignment:
Q  320 tttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgt 418  Q
    |||||||||| ||| ||| |||||||||||||||||||||  || | || |||||||||||| ||||||||||  || ||| |||||||||||| ||| |    
T  36656756 tttaagcgggacccacacctttttaatattaaaaaattgatatgtaatgatataaagttattaatagttgatttatgggtctcatttaagaactttgtat 36656657  T
Q  419 aagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaa 518  Q
     ||||     |||||| ||||||||  ||||||||||| |||||||||| |||||||||||||||| | || | |||||||| ||||||| ||| |||||    
T  36656656 gagatactaattggagggattgagtatttattagataccactattaaaaaattataaatgagtgatatatataagtgagacccatttaagtaccaaaaaa 36656557  T
Q  519 taga 522  Q
    ||||    
T  36656556 taga 36656553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 302 - 407
Target Start/End: Complemental strand, 44441453 - 44441347
Alignment:
Q  302 ttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcc 400  Q
    ||||||||||||||||||||||| | || | |||||| |||||||||||||||||| || || |||| ||||||||||||||||||||||||||| ||||    
T  44441453 ttatttaagacccccaactttaaacagggcgcgcacgcttttaatattaaaaaattaaaatgtagtgatataaagttattgatagttgattagtgggtcc 44441354  T
Q  401 catttaa 407  Q
    |||||||    
T  44441353 catttaa 44441347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 339 - 494
Target Start/End: Original strand, 4958233 - 4958393
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgg----gttgga 433  Q
    |||||||||||||||||||||  || | || ||||||||| ||||||||||||| ||| ||  ||||||||||   ||||| |||| | |    ||||||    
T  4958233 tttttaatattaaaaaattgatatgtaatgatataaagttgttgatagttgatttgtgggtttcatttaagaaagttgtgtgagatgttgttcggttgga 4958332  T
Q  434 gtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgt 494  Q
    | ||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  4958333 gggattgagtgtttattagatactactattaaaaaattataaatgaatgatgtgtacacgt 4958393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 5513975 - 5513805
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtga 437  Q
    ||||||||| ||||||||||| || | |  ||||||||||||||| || |||||||||||| ||||||| || | || || |||| | ||||||||| ||    
T  5513975 ttttaatataaaaaaattgaaatgtaattatataaagttattgatggtcgattagtgagtctcatttaaaaaatttgcgtgagatacggggttggaggga 5513876  T
Q  438 ttgagtgcttattagatactactattaaaata-ttataaatgagtgatgtgtacacgtgagacctatttaa 507  Q
    |||||  ||||||||||| ||||||||||| | |||||||| |||||||||||||||||||| | ||||||    
T  5513875 ttgagaacttattagatattactattaaaaaaattataaataagtgatgtgtacacgtgagatccatttaa 5513805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 339 - 492
Target Start/End: Complemental strand, 48767286 - 48767128
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaag-aactgtgtgtaagat-ctgggttggagt 435  Q
    ||||||||| |||||||||||| |||| || ||||||||||||||||||||||||||| ||| |||||||| || | | ||| |||| || |||| |||     
T  48767286 tttttaataataaaaaattgaaatgcaatgatataaagttattgatagttgattagtgggtctcatttaagaaattatttgtgagatactaggttagagg 48767187  T
Q  436 gattgagt-gcttattagatactactatt-aaaatattataaatgagtgatgtgtacac 492  Q
     ||||||| ||||||||| |||||||||| |||| ||||||||||||||||||||||||    
T  48767186 tattgagtggcttattaggtactactattaaaaaaattataaatgagtgatgtgtacac 48767128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 278 - 519
Target Start/End: Original strand, 39853703 - 39853943
Alignment:
Q  278 caaggttttataagaatacgggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagt-gtataaagt 376  Q
    |||||| |||||||| |  ||||||||||||||||||| |  |||||||||| |   |    ||| ||||||||||||||||| |  | | |||||||||    
T  39853703 caaggtcttataagactcggggtcttatttaagacccctacttttaagcggggcattcgttatttcaatattaaaaaattgaaatataatggtataaagt 39853802  T
Q  377 tattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaatattataa 475  Q
    ||||||||||||||||||| |||||||||||||| | | ||| |||| || |||||||| |||||||| ||||||| ||||||  |||||||    ||||    
T  39853803 tattgatagttgattagtgggtcccatttaagaaatttttgtgagatgctaggttggagcgattgagttcttattacatactataattaaaa---aataa 39853899  T
Q  476 atgagtgatgtgtacacgtgagacctatttaagaacctaaaaat 519  Q
    || ||| ||||||||| ||| |||  ||||||||||| ||||||    
T  39853900 ataagtaatgtgtacatgtgtgactcatttaagaaccaaaaaat 39853943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 339 - 497
Target Start/End: Original strand, 19987154 - 19987314
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatct-gggttggagtg 436  Q
    ||||||||||||||||||||   || | || | |||||||||||||||| |||| ||  |||||||||||||||| ||||| |||| | ||||||||| |    
T  19987154 tttttaatattaaaaaattgttatgtaatgatttaaagttattgatagtcgatttgtaggtcccatttaagaactttgtgtgagatgttgggttggaggg 19987253  T
Q  437 attgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgag 497  Q
    ||   || |||||||  |||||||||||||| ||||||||||| ||||||||||| |||||    
T  19987254 atcatgtacttattatgtactactattaaaaaattataaatgaatgatgtgtacatgtgag 19987314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 499
Target Start/End: Complemental strand, 29914528 - 29914369
Alignment:
Q  343 taatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattg 440  Q
    |||||||||||||||||| || | |  ||||||||||||||||||||||||| |||||||||||| ||| | ||||| ||||  |  ||||||| ||||     
T  29914528 taatattaaaaaattgaaatgtaataatataaagttattgatagttgattagcgagtcccatttatgaaatttgtgtgagatgttaagttggagggatta 29914429  T
Q  441 agtgcttattagatactactatta-aaatattataaatgagtgatgtgtacacgtgagac 499  Q
    |||| ||||||| || |||||||| ||| ||||||||| ||||||| ||| || ||||||    
T  29914428 agtgtttattaggtattactattataaaaattataaataagtgatgcgtaaacttgagac 29914369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 420 - 507
Target Start/End: Original strand, 30859649 - 30859736
Alignment:
Q  420 agatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaa 507  Q
    |||||||||||||||  ||||||| |||||| | |||||||||||||| |||||||||||||||| | ||||||| ||||| ||||||    
T  30859649 agatctgggttggaggaattgagtacttattgggtactactattaaaaaattataaatgagtgatatatacacgtaagacccatttaa 30859736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 339 - 467
Target Start/End: Original strand, 2008584 - 2008714
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtga 437  Q
    |||||||||||||||||||||| || | || |||||| |||||||||||||||||  | || ||||||||||| | ||||| ||||||||||| ||| ||    
T  2008584 tttttaatattaaaaaattgaaatgtaatggtataaaattattgatagttgattaacgggttccatttaagaaatttgtgtgagatctgggttagaggga 2008683  T
Q  438 ttgagtgc-ttattagatactactattaaaa 467  Q
    |||||| | ||||||  |||||||| |||||    
T  2008684 ttgagtactttattaagtactactactaaaa 2008714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 519
Target Start/End: Complemental strand, 46748197 - 46747980
Alignment:
Q  298 ggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtga 396  Q
    ||||||| ||||||||||||  |||||||||| ||| |||  ||||||||||||| ||||||  || | || |||||||||||||| |||||||||| |     
T  46748197 ggtcttagttaagacccccacttttaagcgggacccacactcttttaatattaaataattgatatgtaatgatataaagttattgacagttgattagggg 46748098  T
Q  397 gtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtga 496  Q
    ||||||||| | ||     ||| |||      || ||| |||||||| |||||||| | |||||||||||| ||||||||| ||||||||||| | |||     
T  46748097 gtcccattttaaaaaaaattgtgaga-----atttgagggattgagttcttattaggtgctactattaaaaaattataaataagtgatgtgtataagtgg 46748003  T
Q  497 gacctatttaagaacctaaaaat 519  Q
    |||| |||||| |||| ||||||    
T  46748002 gacccatttaaaaacccaaaaat 46747980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 489
Target Start/End: Complemental strand, 38360911 - 38360762
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagt-gtataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctggg-ttggagtga 437  Q
    |||| |||||||||||||||| ||   | ||||| ||||||||||||||| | ||||| | |||||||| || | ||||| |||| | || ||||||  |    
T  38360911 ttttgatattaaaaaattgaaatgtgatagtatatagttattgatagttggtaagtgaattccatttaaaaaatttgtgtgagatgttggattggag--a 38360814  T
Q  438 ttgagtgcttattagatactactattaaaatattataaatgagtgatgtgta 489  Q
    |||||||||||||||||||||||||||||| ||||| ||| |||||| ||||    
T  38360813 ttgagtgcttattagatactactattaaaaaattatgaatcagtgatatgta 38360762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 321 - 521
Target Start/End: Original strand, 32724208 - 32724413
Alignment:
Q  321 ttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgata---gttgattagtgagtcccatttaagaactgtgt 416  Q
    ||||| ||| ||| ||| |||||||||||||||||||||  || | || ||||||||||||||||   ||| ||||||| || ||||||||||| | |||    
T  32724208 ttaagtgggacccacacctttttaatattaaaaaattgatatgtaatgatataaagttattgatactagttaattagtgggttccatttaagaaatttgt 32724307  T
Q  417 gtaagatct-gggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaa 515  Q
     | |||| | |||||||||  |||  || ||||||||  || |||||||||| ||||||||||| |||| |||||| | | |||| ||||||| ||| ||    
T  32724308 ttgagatgttgggttggagaaatttggttcttattaggcaccactattaaaaaattataaatgaatgatatgtacatgcgggaccaatttaagtacccaa 32724407  T
Q  516 aaatag 521  Q
    ||||||    
T  32724408 aaatag 32724413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 433 - 511
Target Start/End: Complemental strand, 33815962 - 33815884
Alignment:
Q  433 agtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaac 511  Q
    |||||||||||| ||||||||||||  |||||||||||||| || |||||| |||| |||||||||||  |||||||||    
T  33815962 agtgattgagtgtttattagatactgttattaaaatattattaaagagtgacgtgttcacgtgagaccagtttaagaac 33815884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 321 - 508
Target Start/End: Original strand, 38223952 - 38224143
Alignment:
Q  321 ttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtccca--tttaagaactgtgtg 417  Q
    ||||| ||| ||| ||| ||||||||||||||||||| |  || | || ||||| |||||||||||||||||  |||||| ||  |||||||||| |||     
T  38223952 ttaagtgggacccacacctttttaatattaaaaaatttatatgtaatgatataatgttattgatagttgatttttgagtctcatttttaagaactttgtt 38224051  T
Q  418 taagat-ctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaag 508  Q
    | |||| |||||||| || |||||||| |||||||| |||||| || |||| ||| ||||| | | |||||||||  ||||||  |||||||    
T  38224052 tgagatactgggttgaagggattgagtacttattaggtactaccatcaaaaaattctaaataaatcatgtgtacatatgagactcatttaag 38224143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 424 - 519
Target Start/End: Complemental strand, 31322355 - 31322260
Alignment:
Q  424 ctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaat 519  Q
    |||| |||||| ||| | || |||||||| ||||||| |||||| |||||||||||||||||||||||  || |||| ||||||| ||| ||||||    
T  31322355 ctggattggagagatggtgttcttattaggtactactgttaaaaaattataaatgagtgatgtgtacatatgtgacccatttaagtaccaaaaaat 31322260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 299 - 467
Target Start/End: Complemental strand, 36901206 - 36901035
Alignment:
Q  299 gtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgag 397  Q
    ||||||||||||||| |||  ||||||| || |||  |   |||||||||||||||||| || |  | || |||||| |||||||||||||||||||  |    
T  36901206 gtcttatttaagacctccacttttaagctgggcccttattcttttaatattaaaaaattaaaatataatgatataaaattattgatagttgattagtagg 36901107  T
Q  398 tcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgc-ttattagatactactattaaaa 467  Q
    || |||||||||| | | ||| |||| || |||||||| |||||| | | ||||||| ||||||||||||||    
T  36901106 tctcatttaagaaatttttgtgagatactcggttggagggattgaattctttattaggtactactattaaaa 36901035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 520
Target Start/End: Original strand, 9429742 - 9429816
Alignment:
Q  446 ttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaata 520  Q
    ||||||| |||||| ||||||| ||||||||||| || ||||||||||||| ||| |||||   |||||||||||    
T  9429742 ttattaggtactacaattaaaaaattataaatgaatgttgtgtacacgtgacacccatttagatacctaaaaata 9429816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 423
Target Start/End: Original strand, 13057896 - 13057950
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat 423  Q
    |||||||||||||||||||||||||| |||| |||||||||| | ||||| ||||    
T  13057896 tataaagttattgatagttgattagtaagtcacatttaagaaatttgtgtgagat 13057950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 331 - 467
Target Start/End: Original strand, 6068084 - 6068221
Alignment:
Q  331 cccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggt 429  Q
    ||||||| |||||||||||||||||||||| || | || || ||| |||||| |||||||||||||  |   |||||| || | ||| | ||||||  ||    
T  6068084 cccgcacttttttaatattaaaaaattgaaatgtaatgatagaaaattattggtagttgattagtggattttatttaaaaaatttgtatgagatcttagt 6068183  T
Q  430 tggagtgattgagtgcttattagatactactattaaaa 467  Q
    || ||  ||| ||| |||||||||||||||||||||||    
T  6068184 tgaaggaattaagtacttattagatactactattaaaa 6068221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 429 - 489
Target Start/End: Complemental strand, 38974820 - 38974760
Alignment:
Q  429 ttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgta 489  Q
    ||||||| ||||| | |||| ||||||||  |||||||||||||||||| |||||||||||    
T  38974820 ttggagtcattgaatccttaatagatacttttattaaaatattataaataagtgatgtgta 38974760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 410
Target Start/End: Complemental strand, 46282228 - 46282187
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaa 410  Q
    |||||| |||||||||||||||||||| ||| ||||||||||    
T  46282228 tataaaattattgatagttgattagtgggtctcatttaagaa 46282187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 519
Target Start/End: Complemental strand, 48615386 - 48615234
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaa 467  Q
    ||||||||||||||||| |||||| ||  | || |||||||| | ||||| || | |||| ||||||  ||||| || ||||||| |||||   ||||||    
T  48615386 tataaagttattgatagatgattaatggattccgtttaagaaatttgtgtgaggtgctggcttggaggaattgaatgtttattaggtactaacgttaaaa 48615287  T
Q  468 tattataaatgagtgatgtgtacacgtgag-acctatttaagaacctaaaaat 519  Q
     |||| ||||||||  |||||||||||| | ||| ||||||| ||| ||||||    
T  48615286 aattaaaaatgagtattgtgtacacgtgtgtaccaatttaaggacccaaaaat 48615234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 2e-56; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 297 - 511
Target Start/End: Original strand, 35468286 - 35468500
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtgt-ataaagttattgatagttgattagtg 395  Q
    ||||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||||| || || ||||  |||||||||||||||||| |||||||    
T  35468286 gggtcttatttaagaccaccaactttaagcggggctcgcacgcttttaatattaaaaaattcaaatgtagtggcataaagttattgatagttaattagtg 35468385  T
Q  396 agtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtg 495  Q
    |||| |||||||||||| || || ||||| | ||||||| |||||||| |||||||  |||| ||||||||| |||||||||||||||||||||| ||||    
T  35468386 agtctcatttaagaactttgagtgagatcagtgttggagggattgagtacttattaagtactgctattaaaa-attataaatgagtgatgtgtacgcgtg 35468484  T
Q  496 agacctatttaagaac 511  Q
    ||||| ||||||||||    
T  35468485 agacccatttaagaac 35468500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 300 - 477
Target Start/End: Complemental strand, 2603240 - 2603062
Alignment:
Q  300 tcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagt 398  Q
    |||||||||||||||| |||||||||||||  ||||||| ||||||||||||||||||||| || |||| |||||||||||||||||||||||||||  |    
T  2603240 tcttatttaagaccccaaactttaagcggggtccgcacgcttttaatattaaaaaattgaaatgtagtgatataaagttattgatagttgattagtggat 2603141  T
Q  399 cccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaat 477  Q
    | |||||||||||| ||||| |||||||| |||||| |||||||| ||||||||||||||||||||||| |||||||||    
T  2603140 ctcatttaagaactttgtgtgagatctggattggagggattgagtacttattagatactactattaaaaaattataaat 2603062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 305 - 519
Target Start/End: Complemental strand, 31226632 - 31226417
Alignment:
Q  305 tttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccat 403  Q
    ||||||||| |||  |||||||||| |||||||  ||||||||||||||||||||| |  | || |||||| |||||||||||||| ||||| |||||||    
T  31226632 tttaagacctccacttttaagcgggacccgcactcttttaatattaaaaaattgaaatataatgatataaaattattgatagttgagtagtgggtcccat 31226533  T
Q  404 ttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctat 503  Q
    ||||||||| ||||| |||||| |||||||||| ||||||  ||||||| |||||||||||||| ||||||||||||||||||||||| |||| ||| ||    
T  31226532 ttaagaactttgtgtgagatctaggttggagtgtttgagtatttattaggtactactattaaaaaattataaatgagtgatgtgtacatgtgacacccat 31226433  T
Q  504 ttaagaacctaaaaat 519  Q
    ||||||||| ||||||    
T  31226432 ttaagaacccaaaaat 31226417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 300 - 519
Target Start/End: Complemental strand, 37673929 - 37673704
Alignment:
Q  300 tcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagt 398  Q
    ||||||||||||||||||||||||||||||  ||  ||| ||||||||||||||||||  | || |||| |||||| |||||||||||||||||||| ||    
T  37673929 tcttatttaagacccccaactttaagcggggtccatacgcttttaatattaaaaaattagaatgtagtgatataaaattattgatagttgattagtgggt 37673830  T
Q  399 cccatttaagaactgtgtgtaagatctgggttggagtga-----ttgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacg 493  Q
    || ||||||||||| ||||| |||||||| |||||| ||     || ||| |||||||| |||||||||||||| |||||||||||||||||||||| ||    
T  37673829 ccaatttaagaactttgtgtgagatctggattggagggattaagttaagtacttattaggtactactattaaaaaattataaatgagtgatgtgtacgcg 37673730  T
Q  494 tgagacctatttaagaacctaaaaat 519  Q
    ||| || |||||||||||| ||||||    
T  37673729 tgacacatatttaagaacccaaaaat 37673704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 297 - 495
Target Start/End: Complemental strand, 5535964 - 5535765
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    |||| ||| ||||||||||||  |||||||| | |||||||  ||||||||||||||||||||| |  | || |||||||||||||| |||||||| |||    
T  5535964 gggttttacttaagacccccacttttaagcgagacccgcactcttttaatattaaaaaattgaaatataatgatataaagttattgaaagttgatttgtg 5535865  T
Q  396 agtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtg 495  Q
     || || |||||||||| ||||| |||||| ||||||||||||||||||||||| || ||||| |||||||| |||||||||||||||||||||||||||    
T  5535864 ggttccgtttaagaactttgtgtgagatctaggttggagtgattgagtgcttataaggtactaatattaaaaaattataaatgagtgatgtgtacacgtg 5535765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 297 - 511
Target Start/End: Complemental strand, 14426291 - 14426076
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    |||||||||||||||||||||  |||||| |||  || |||  |||||||||||||||||| || |  | || |||||| ||||||||| |||| |||||    
T  14426291 gggtcttatttaagacccccacttttaagtgggatccacactcttttaatattaaaaaattaaaattaaatgatataaaattattgataattgagtagtg 14426192  T
Q  396 agtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtg 495  Q
    ||||||||||||||||| ||||| ||||||| ||||||||||||||||| ||||||| || | | ||||||| ||||||||  |||||||||||||||||    
T  14426191 agtcccatttaagaactttgtgtgagatctgagttggagtgattgagtgtttattaggtattgcaattaaaaaattataaagaagtgatgtgtacacgtg 14426092  T
Q  496 agacctatttaagaac 511  Q
     |||| ||||||||||    
T  14426091 tgacccatttaagaac 14426076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 298 - 519
Target Start/End: Complemental strand, 1155310 - 1155084
Alignment:
Q  298 ggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-----tataaagttattgatagttgatta 392  Q
    ||||||| |||||||| ||||  ||||||||| | | |||  ||||||||||||||||||||| || | |      ||||||||||||| ||||||||||    
T  1155310 ggtcttacttaagacctccaatcttaagcgggactcacactcttttaatattaaaaaattgaaatgtaattaatgatataaagttattggtagttgatta 1155211  T
Q  393 gtgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacac 492  Q
     |  ||| |||||||||| | ||||| ||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1155210 atatgtctcatttaagaaatttgtgtgagatctgggttggagggattgaatgcttattagatactactattaaaaaattataaatgagtgatgtgtacac 1155111  T
Q  493 gtgagacctatttaagaacctaaaaat 519  Q
    | | || | ||||||||||| ||||||    
T  1155110 gcgggatccatttaagaaccaaaaaat 1155084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 297 - 517
Target Start/End: Complemental strand, 9604673 - 9604451
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    ||||||||||||||| |||||  ||||||||||  || |||  ||||||| ||||||||||||| |  | || |||||||||||||||||||||||||||    
T  9604673 gggtcttatttaagatccccatttttaagcgggatcctcactcttttaatgttaaaaaattgaaatctaatgatataaagttattgatagttgattagtg 9604574  T
Q  396 agtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgt 494  Q
     || ||||||||||| | | | | |||| ||||||||||  |||||||| |||||||||||||| |||||||| ||||||||| ||||||| ||| ||||    
T  9604573 ggttccatttaagaaatttttatgagatgctgggttggatggattgagttcttattagatactattattaaaaaattataaattagtgatgcgtagacgt 9604474  T
Q  495 gagacctatttaagaacctaaaa 517  Q
    |||||||||||||||| ||||||    
T  9604473 gagacctatttaagaatctaaaa 9604451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 306 - 507
Target Start/End: Complemental strand, 18806729 - 18806528
Alignment:
Q  306 ttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatt 404  Q
    |||||||||| |  |||||||||| ||||||| |||| ||||||||||||||||| |  | || |||||||||||||||||||||||||||  |||||||    
T  18806729 ttaagacccctacttttaagcgggacccgcacctttt-aatattaaaaaattgaaatataatgatataaagttattgatagttgattagtggatcccatt 18806631  T
Q  405 taagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatt 504  Q
    ||| || | ||||| |||||| |||| ||||||| || || |||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||    
T  18806630 taaaaaatttgtgtgagatctaggtttgagtgatcgaatgtttattagatactactattaaaaaattataaataagtgatgtgtacacgtgaaacccatt 18806531  T
Q  505 taa 507  Q
    |||    
T  18806530 taa 18806528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 297 - 511
Target Start/End: Complemental strand, 6519213 - 6518999
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    |||||||| |||||||| ||   ||||||||||  ||||||  ||||| ||||||||||||||| || | || |||||||||||||||||||||||||||    
T  6519213 gggtcttacttaagacctccgcttttaagcgggatccgcactcttttagtattaaaaaattgaaatgtaatgatataaagttattgatagttgattagtg 6519114  T
Q  396 agtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgt 494  Q
    |||| |||||||||| | ||||  |||| ||||||||||| |||||| | |||||||| |||||||||||||| ||||||||| |||||| ||| |||||    
T  6519113 agtctcatttaagaaatttgtg--agatgctgggttggagagattgaattcttattaggtactactattaaaaaattataaataagtgatatgtgcacgt 6519016  T
Q  495 gagacctatttaagaac 511  Q
    | |||| ||||||||||    
T  6519015 gggacccatttaagaac 6518999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 297 - 521
Target Start/End: Original strand, 23982198 - 23982427
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    |||||||| ||||||||| ||  |||||||||| ||  ||| |||||||||||||||||||||| |  | || |||||||||||||||||||| |||||     
T  23982198 gggtcttacttaagaccctcacttttaagcgggacca-cacttttttaatattaaaaaattgaaatataatgatataaagttattgatagttggttagta 23982296  T
Q  396 agt----cccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactact-attaaaatattataaatgagtgatgtgtac 490  Q
     ||    |||||||||||||| ||||||||||||||||||||||||||| ||  ||||||  || |  | ||||||| ||||||||||||||||||||||    
T  23982297 cgtggatcccatttaagaactttgtgtaagatctgggttggagtgattgggtcattattaagtattttttattaaaaaattataaatgagtgatgtgtac 23982396  T
Q  491 acgtgagacctatttaagaacctaaaaatag 521  Q
    |||||| | | ||||||||||| ||||||||    
T  23982397 acgtgaaaaccatttaagaacccaaaaatag 23982427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 321 - 511
Target Start/End: Complemental strand, 13629184 - 13628992
Alignment:
Q  321 ttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgta 419  Q
    ||||| ||| ||| ||| |||||||||||||||||||||  || | || |||||||||||||||||||||||  ||  ||| ||||||||| | ||| |     
T  13629184 ttaagtgggtcccacacatttttaatattaaaaaattgatatgtaatggtataaagttattgatagttgatttctggatcctatttaagaattttgtatg 13629085  T
Q  420 agatct-gggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaac 511  Q
    |||| | ||||||||| |||||| | ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||||||||    
T  13629084 agatgttgggttggagggattgactacttattagatactactattaaaaaattataaatgaatgatgtgtacatgtgagacccatttaagaac 13628992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 321 - 511
Target Start/End: Complemental strand, 13729596 - 13729404
Alignment:
Q  321 ttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgta 419  Q
    ||||| ||| ||| ||| |||||||||||||||||||||  || | || |||||||||||||||||||||||  ||  ||| ||||||||| | ||| |     
T  13729596 ttaagtgggtcccacacatttttaatattaaaaaattgatatgtaatggtataaagttattgatagttgatttctggatcctatttaagaattttgtatg 13729497  T
Q  420 agatct-gggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaac 511  Q
    |||| | ||||||||| |||||| | ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||||||||    
T  13729496 agatgttgggttggagggattgactacttattagatactactattaaaaaattataaatgaatgatgtgtacatgtgagacccatttaagaac 13729404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 320 - 505
Target Start/End: Complemental strand, 31128704 - 31128518
Alignment:
Q  320 tttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgt 418  Q
    |||||| ||| |||||||  || ||||||||| |||||||| |  | || ||||||||||||||||||| ||||||  ||| |||||||||||| ||||     
T  31128704 tttaagagggacccgcactcttataatattaacaaattgaaatataatgatataaagttattgatagtttattagtaggtctcatttaagaactttgtga 31128605  T
Q  419 aagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctattt 505  Q
     |||| | |||| |||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||  ||||||||| ||||    
T  31128604 gagatttaggttagagtgattgaatgcttattaggtactactattaaaaaattataaatgagtgatgtgtatgcgtgagacccattt 31128518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 369 - 444
Target Start/End: Complemental strand, 5978614 - 5978539
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtg 444  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||    
T  5978614 tataaagttattgatagttgattagtgggtcccatttaagaactttgtgtcagatctgggttggagtgattgagtg 5978539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 278 - 440
Target Start/End: Original strand, 9134085 - 9134248
Alignment:
Q  278 caaggttttataagaatacgggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagt 376  Q
    |||||| |||||||| |  |||||||| |||||| || |   ||||||||||  ||||||  ||||||||||||||||||||| |  | || ||||||||    
T  9134085 caaggtcttataagactcggggtcttacttaagatcctcccttttaagcgggatccgcactcttttaatattaaaaaattgaaatataatgatataaagt 9134184  T
Q  377 tattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgattg 440  Q
    ||||||||||||||||||||||| |||||||||||| ||||| |||||| |||| |||||||||    
T  9134185 tattgatagttgattagtgagtctcatttaagaactttgtgtgagatctaggtttgagtgattg 9134248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 320 - 513
Target Start/End: Complemental strand, 5139823 - 5139630
Alignment:
Q  320 tttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgt 418  Q
    |||||||||| || ||||  |||||||||||||||||  || |  | || |||||| |||||||||||||||||||||||  ||||||||| || |||||    
T  5139823 tttaagcgggaccagcactcttttaatattaaaaaatgaaaatataatgatataaaattattgatagttgattagtgagtttcatttaagagctttgtgt 5139724  T
Q  419 aagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacct 513  Q
     |||||||||||||||||||| |||  ||||||| ||||||  | |||| ||||||||  ||| |||||||||||||  ||| ||||||||||||    
T  5139723 gagatctgggttggagtgattaagt-attattaggtactacattaaaaaaattataaacaagttatgtgtacacgtggaacccatttaagaacct 5139630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 340 - 488
Target Start/End: Original strand, 28540667 - 28540817
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtga 437  Q
    ||||||||||||||||||||| || | || ||||||  ||||||||||||||||||||||| | |||||||| | ||||| |||| |||||||||||| |    
T  28540667 ttttaatattaaaaaattgaaatgtaatgatataaaactattgatagttgattagtgagtctcttttaagaaatttgtgtgagatgctgggttggagtaa 28540766  T
Q  438 ttgagtgcttattagatactactattaaaatattataaatgagtgatgtgt 488  Q
    |||| | |||||||  |||||||||||||| ||||||||| || |||||||    
T  28540767 ttgaatacttattaagtactactattaaaaaattataaattagggatgtgt 28540817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 340 - 494
Target Start/End: Complemental strand, 11777795 - 11777640
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgat 438  Q
    ||||||||||||||| ||||| || | || ||||||||||||||||||||||||||  ||| |||||||||| | ||||| | || ||| ||| || |||    
T  11777795 ttttaatattaaaaagttgaaatgtaatgatataaagttattgatagttgattagtaggtctcatttaagaaatttgtgtgatatatggattgcagggat 11777696  T
Q  439 tgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgt 494  Q
    ||| ||||| |||| |||||||||||| | ||||||||||| |||| |||||||||    
T  11777695 tgaatgcttgttaggtactactattaagaaattataaatgaatgatttgtacacgt 11777640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 433 - 519
Target Start/End: Original strand, 9135092 - 9135177
Alignment:
Q  433 agtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaat 519  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  9135092 agtgattgagtgcttattaggtactactattaaaa-attgtaaatgagtgatatgtacacgtgagacccatttaagaatccaaaaat 9135177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 23036790 - 23036943
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtga 437  Q
    ||||||||||||||||||||  || | || |||||| ||||||||||||||| ||||  |  |  ||||||| | ||||| |||| |||||||| || ||    
T  23036790 ttttaatattaaaaaattgatatgtaatgatataaaattattgatagttgatcagtggatttctattaagaaatttgtgtgagatgctgggttgaagaga 23036889  T
Q  438 ttgagtgcttattagatactactattaaaatattataaatgagtgatgtgtaca 491  Q
    |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||    
T  23036890 ttgagttcttattagatactactattgaaaaattataattgagtgatgtgtaca 23036943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 371 - 521
Target Start/End: Complemental strand, 4797329 - 4797178
Alignment:
Q  371 taaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaata 469  Q
    |||||||||||||||||||||| |||||| |||||||||| | ||||| |||| ||| ||||||| ||||   |  |||||| || |||||||||||| |    
T  4797329 taaagttattgatagttgattaatgagtcacatttaagaaatttgtgtgagatgctgagttggagggattagatatttattaaatgctactattaaaaaa 4797230  T
Q  470 ttataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaatag 521  Q
    |||||||| ||||||  |||||||||||| | ||||||| | | ||||||||    
T  4797229 ttataaattagtgatacgtacacgtgagatccatttaagtatccaaaaatag 4797178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 467
Target Start/End: Complemental strand, 8673728 - 8673598
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtg 436  Q
    ||||||||||||||||||  || || |||| ||||||||| |||||| |||||||||| |||  |||||| || | | ||| |||| ||||||||||| |    
T  8673728 tttttaatattaaaaaatgaaaatgtagtgatataaagtttttgataattgattagtgggtcaaatttaaaaaatttatgtgagatgctgggttggagag 8673629  T
Q  437 attgagtgcttattagatactactattaaaa 467  Q
    |||||||||||||||| ||||||||||||||    
T  8673628 attgagtgcttattaggtactactattaaaa 8673598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 369 - 477
Target Start/End: Complemental strand, 30714147 - 30714038
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaa 467  Q
    ||||||||||||||||||||||||||||||||||||||  || | ||||| ||||  ||| |||||   ||| |||||||||||  ||||||||||||||    
T  30714147 tataaagttattgatagttgattagtgagtcccatttacaaaatttgtgtgagatgttggattggaaatattaagtgcttattatgtactactattaaaa 30714048  T
Q  468 tattataaat 477  Q
    ||||||||||    
T  30714047 tattataaat 30714038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 369 - 477
Target Start/End: Complemental strand, 30721924 - 30721815
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaa 467  Q
    ||||||||||||||||||||||||||||||||||||||  || | ||||| ||||  ||| |||||   ||| |||||||||||  ||||||||||||||    
T  30721924 tataaagttattgatagttgattagtgagtcccatttacaaaatttgtgtgagatgttggattggaaatattaagtgcttattatgtactactattaaaa 30721825  T
Q  468 tattataaat 477  Q
    ||||||||||    
T  30721824 tattataaat 30721815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 369 - 484
Target Start/End: Original strand, 7288248 - 7288364
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaa 467  Q
    ||||||||||| |||||||||||||| |||| |||||||||| | | | | |||| ||||||||||| |||| ||| |||||||||||||||||| |||     
T  7288248 tataaagttatcgatagttgattagtaagtctcatttaagaaatttctatgagatgctgggttggagggattaagttcttattagatactactatgaaac 7288347  T
Q  468 tattataaatgagtgat 484  Q
     ||||||||| ||||||    
T  7288348 aattataaataagtgat 7288364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 320 - 467
Target Start/End: Complemental strand, 16531717 - 16531569
Alignment:
Q  320 tttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgt 418  Q
    ||||||||||  ||||||  ||||||||||||||||||||| |  | || |||||||||||  |||||||||||||   || | |||||||| | ||| |    
T  16531717 tttaagcgggatccgcacaattttaatattaaaaaattgaaatataatgatataaagttatgaatagttgattagtagatctcttttaagaattttgtat 16531618  T
Q  419 aagatctgggttggagtgattgagtgcttattagatactactattaaaa 467  Q
     |||||| ||||||| ||||||||||||||||| ||| |||||||||||    
T  16531617 gagatctaggttggaatgattgagtgcttattaaatattactattaaaa 16531569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 440
Target Start/End: Original strand, 9133756 - 9133899
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtgtata-aagttattgatagttgattagtg 395  Q
    |||| ||| ||||||||| ||  ||||||||||  ||||||  ||||||||||| ||||||||| |  | || ||| ||||| ||| |||||||||||||    
T  9133756 gggttttacttaagaccctcacttttaagcgggatccgcactcttttaatattagaaaattgaaatataatg-atataagtttttggtagttgattagtg 9133854  T
Q  396 agtcccatttaagaactgtgtgtaagatctgggttggagtgattg 440  Q
    |||| |||||||||||| ||||| |||||| |||| |||||||||    
T  9133855 agtctcatttaagaactttgtgtgagatctaggtttgagtgattg 9133899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 339 - 495
Target Start/End: Original strand, 3628224 - 3628380
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtg 436  Q
    |||||||||||||||||||||  || | || ||||||||||||| |||||||||| ||| |  |||||||||| | ||||  |||| ||| |||||||      
T  3628224 tttttaatattaaaaaattgagatgtaatgatataaagttattgctagttgattaatgaatttcatttaagaaatttgtg--agatactgagttggagga 3628321  T
Q  437 attgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtg 495  Q
    ||| |||||||||||   ||||||||||||| ||||||||| | |||| ||||||||||    
T  3628322 atttagtgcttattaagcactactattaaaaaattataaataaatgatatgtacacgtg 3628380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 488
Target Start/End: Original strand, 28557242 - 28557392
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatc-tgggttggagtga 437  Q
    ||||||||||||||||||||| || | |  ||||||  | ||||||||||||||||||||| | ||||| ||   | ||| ||||| | ||||||||  |    
T  28557242 ttttaatattaaaaaattgaaatgtaataatataaaagtgttgatagttgattagtgagtctcttttaaaaaaattatgtgagatcctaggttggaggaa 28557341  T
Q  438 ttgagtgcttattagatactactattaaaatattataaatgagtgatgtgt 488  Q
    ||||||  ||||||| |||||||||||||| ||||||||| ||||||||||    
T  28557342 ttgagtagttattaggtactactattaaaaaattataaattagtgatgtgt 28557392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 369 - 492
Target Start/End: Original strand, 38937818 - 38937942
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaa 467  Q
    ||||||||| ||||||||||||| |||  ||| |||||| |||| ||||| ||||  || ||||||| |||||||| |||||||| |   ||||||||||    
T  38937818 tataaagttgttgatagttgatttgtggatcctatttaaaaactttgtgtgagatgttgtgttggagggattgagttcttattaggtgtcactattaaaa 38937917  T
Q  468 tattataaatgagtgatgtgtacac 492  Q
     ||||||||| |||||| |||||||    
T  38937918 aattataaataagtgatatgtacac 38937942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 486
Target Start/End: Complemental strand, 23812670 - 23812551
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgt-gtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaa 466  Q
    |||||||||||||||||||||||||||| | |||||||| || | | |||| |||| || | |||||| ||||||||||||||||| |||||  ||||||    
T  23812670 tataaagttattgatagttgattagtgaataccatttaaaaaattttgtgtgagatgctagattggagagattgagtgcttattaggtactataattaaa 23812571  T
Q  467 atattataaatgagtgatgt 486  Q
    |  ||| ||||| |||||||    
T  23812570 aacttaaaaatgtgtgatgt 23812551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 446 - 508
Target Start/End: Original strand, 13079886 - 13079948
Alignment:
Q  446 ttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaag 508  Q
    ||||||| |||||||||| ||| |||||||||||||||  |||||||||||||| ||||||||    
T  13079886 ttattaggtactactattcaaaaattataaatgagtgaaatgtacacgtgagacttatttaag 13079948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 521
Target Start/End: Original strand, 4326033 - 4326091
Alignment:
Q  463 taaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaatag 521  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||||| | | ||||||||    
T  4326033 taaaaaattataaatgagtgatgtgtacacttgagacccatttaagtatccaaaaatag 4326091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 457
Target Start/End: Original strand, 28567760 - 28567922
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    |||||| | ||||||||| |||  ||||||||| ||| | |  ||||||||||||||||||||| |  | || |||||||||||||||||||| |||  |    
T  28567760 gggtctcacttaagaccctcaatcttaagcgggacccactctattttaatattaaaaaattgaaatataatgatataaagttattgatagttgcttatcg 28567859  T
Q  396 agtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatact 457  Q
     | | |||||||| | | ||| | |||| ||||||||||  |||||||| |||||||||||||    
T  28567860 tggctcatttaagtaatttgtatgagatgctgggttggaaggattgagtacttattagatact 28567922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 457
Target Start/End: Original strand, 28575353 - 28575515
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    |||||| | ||||||||| |||  ||||||||| ||| | |  ||||||||||||||||||||| |  | || |||||||||||||||||||| |||  |    
T  28575353 gggtctcacttaagaccctcaatcttaagcgggacccactctcttttaatattaaaaaattgaaatataatgatataaagttattgatagttgcttatcg 28575452  T
Q  396 agtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatact 457  Q
     | | |||||||| | | ||| | |||| ||||||||||  |||||||| |||||||||||||    
T  28575453 tggctcatttaagtaatttgtatgagatgctgggttggaaggattgagtacttattagatact 28575515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 454 - 491
Target Start/End: Original strand, 36316844 - 36316881
Alignment:
Q  454 tactactattaaaatattataaatgagtgatgtgtaca 491  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  36316844 tactattattaaaatattataaatgagtgatgtgtaca 36316881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 523
Target Start/End: Original strand, 21353382 - 21353453
Alignment:
Q  452 gatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaatagat 523  Q
    |||| ||||||||||| |||||| |  ||||||||||| |||||| ||  |||||||||| |||||||||||    
T  21353382 gatattactattaaaaaattatagaaaagtgatgtgtagacgtgatactcatttaagaacttaaaaatagat 21353453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 457 - 507
Target Start/End: Complemental strand, 3194905 - 3194856
Alignment:
Q  457 tactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaa 507  Q
    ||||||||||| ||||||||||||||||||||||||| |||| | ||||||    
T  3194905 tactattaaaa-attataaatgagtgatgtgtacacgcgagatccatttaa 3194856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 429 - 495
Target Start/End: Complemental strand, 7177068 - 7177002
Alignment:
Q  429 ttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtg 495  Q
    ||||||| ||||||| |||| ||||||||   ||||||| ||||||||| | |||||||||||||||    
T  7177068 ttggagtcattgagtccttaatagatactttcattaaaaaattataaataaatgatgtgtacacgtg 7177002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 508
Target Start/End: Original strand, 36317071 - 36317136
Alignment:
Q  443 tgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaag 508  Q
    |||||||||| |||||| ||| ||  ||||||||| | |||||||||||||||||||  |||||||    
T  36317071 tgcttattaggtactacgattgaataattataaataaatgatgtgtacacgtgagactcatttaag 36317136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 395
Target Start/End: Complemental strand, 10954200 - 10954144
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    ||||||||||||||||||||| || | || |||||| | ||||||||||||||||||    
T  10954200 ttttaatattaaaaaattgaaatgtaatgatataaaataattgatagttgattagtg 10954144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 395
Target Start/End: Complemental strand, 10962205 - 10962149
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    ||||||||||||||||||||| || | || |||||| | ||||||||||||||||||    
T  10962205 ttttaatattaaaaaattgaaatgtaatgatataaaataattgatagttgattagtg 10962149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 429 - 489
Target Start/End: Original strand, 41438498 - 41438558
Alignment:
Q  429 ttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgta 489  Q
    ||||||| ||||| | |||| || |||||  |||||||||||||||||| |||||||||||    
T  41438498 ttggagtcattgaatccttaataaatacttttattaaaatattataaataagtgatgtgta 41438558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 429 - 489
Target Start/End: Original strand, 42374297 - 42374357
Alignment:
Q  429 ttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgta 489  Q
    ||||||| ||||||| |||| ||| ||||  |||||||| ||||||||| |||||||||||    
T  42374297 ttggagtcattgagtccttaataggtacttttattaaaacattataaataagtgatgtgta 42374357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 2e-56; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 314 - 519
Target Start/End: Complemental strand, 32977526 - 32977319
Alignment:
Q  314 cccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaact 412  Q
    |||||||||||| ||| || ||||  ||||||| ||||||||||||| || |||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  32977526 cccaactttaagtgggacctgcactcttttaatgttaaaaaattgaaatgtagtggtataaagttattgatagttgattagtgggtcccatttaagaact 32977427  T
Q  413 gtgtgtaagatctgggttggagtgattgagtgcttattagatactactatt-aaaatattataaatgagtgatgtgtacacgtgagacctatttaagaac 511  Q
     ||||| ||||||||||||||| ||||||||||||||||| |||||||||| |||| || ||||||||||||||||||| |||| |||| ||||||| ||    
T  32977426 ttgtgtgagatctgggttggagggattgagtgcttattaggtactactattaaaaaaatcataaatgagtgatgtgtacgcgtgggacccatttaagtac 32977327  T
Q  512 ctaaaaat 519  Q
    | ||||||    
T  32977326 ccaaaaat 32977319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 320 - 519
Target Start/End: Complemental strand, 32658573 - 32658373
Alignment:
Q  320 tttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgt 418  Q
    |||||||||| ||| |||  |||||||||||||||||| || |  | || |||||||||||||||||||||||||||  | ||||||||||||| |||||    
T  32658573 tttaagcgggacccacactcttttaatattaaaaaattaaaatatactgatataaagttattgatagttgattagtggattccatttaagaactttgtgt 32658474  T
Q  419 aagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaa 518  Q
     |||| ||||||||||||||| |||| ||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  32658473 gagatatgggttggagtgatttagtgtttattaggtactactattaaaaaattataaatgagtgatgtgtccacgtgagacccatttaagaacctaaaaa 32658374  T
Q  519 t 519  Q
    |    
T  32658373 t 32658373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 297 - 519
Target Start/End: Complemental strand, 5002540 - 5002316
Alignment:
Q  297 gggtcttatttaagacccccaacttt-aagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagt 394  Q
    |||||||||| ||||||||  ||||| ||||||| |||||||  |||||||||| |||||||||| |  | |  ||||||||||||||||||||||||||    
T  5002540 gggtcttattaaagacccc--actttgaagcgggacccgcactcttttaatatttaaaaattgaaatataataatataaagttattgatagttgattagt 5002443  T
Q  395 gagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactact--attaaaatattataaatgagtgatgtgtacac 492  Q
    | |||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||  |  |||| ||||||||| ||||||||||||||    
T  5002442 gggtcccatttaagaactttgtgtgagatctcggttggagtgattgagtgcttattagatactactacaaaaaaaaattataaataagtgatgtgtacac 5002343  T
Q  493 gtgagacctatttaagaacctaaaaat 519  Q
    || ||||| |||||| |||| ||||||    
T  5002342 gtaagacccatttaaaaacccaaaaat 5002316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 297 - 467
Target Start/End: Complemental strand, 22281938 - 22281767
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    |||||||| ||||||||||||  |||||| ||  |||||||  ||||||| ||||||||||||| |  | || ||||||||||||||| |||||||||||    
T  22281938 gggtcttacttaagacccccacttttaagtggcacccgcactcttttaatgttaaaaaattgaaatataatgatataaagttattgatggttgattagtg 22281839  T
Q  396 agtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaa 467  Q
    | ||||||||||||||| ||||  |||||  |||||||||||||||||||||||||| ||||||||||||||    
T  22281838 aatcccatttaagaactttgtgggagatcaaggttggagtgattgagtgcttattaggtactactattaaaa 22281767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 339 - 500
Target Start/End: Complemental strand, 7694052 - 7693889
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatc-tgggttggagtg 436  Q
    |||||||||||||||||||||| || | || ||| ||||||||||||||||||||||| || |||||||| || | ||||| ||||  |||||||||| |    
T  7694052 tttttaatattaaaaaattgaaatgtattgatatgaagttattgatagttgattagtgggttccatttaaaaaatttgtgtgagattatgggttggaggg 7693953  T
Q  437 attgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacc 500  Q
    ||||||| |||||||| ||||| || ||||| ||||||||||||||||||||| ||||||||||    
T  7693952 attgagtacttattaggtactattactaaaaaattataaatgagtgatgtgtatacgtgagacc 7693889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 371 - 512
Target Start/End: Original strand, 33755768 - 33755909
Alignment:
Q  371 taaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatat 470  Q
    |||||||||||||||||||||||||  |  |||||||||| | ||||| |||| || |||||||||||||| | |||||||| |||||||||||||| ||    
T  33755768 taaagttattgatagttgattagtggatttcatttaagaattttgtgtgagatttgtgttggagtgattgaatacttattaggtactactattaaaaaat 33755867  T
Q  471 tataaatgagtgatgtgtacacgtgagacctatttaagaacc 512  Q
     |||||| ||| |||| ||||| ||||||| |||||||||||    
T  33755868 aataaataagtaatgtatacacttgagacccatttaagaacc 33755909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 300 - 457
Target Start/End: Complemental strand, 21941099 - 21940941
Alignment:
Q  300 tcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtgt-ataaagttattgatagttgattagtgagt 398  Q
    |||||||||||||| ||||||||||||||| ||||  |  ||||||||||||||||||||| |  |||   |||||||||||||||||| ||||||| |     
T  21941099 tcttatttaagacctccaactttaagcgggacccgtgctcttttaatattaaaaaattgaaatatagtaacataaagttattgatagtttattagtggga 21941000  T
Q  399 cccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatact 457  Q
    |||||||||||  | ||||| |||| |||||||||| ||||||||| ||||||| ||||    
T  21940999 cccatttaagacttttgtgtgagatatgggttggagggattgagtgtttattaggtact 21940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 369 - 523
Target Start/End: Original strand, 387751 - 387906
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtga-ttgagtgcttattagatactactattaaaa 467  Q
    ||||||||||||||||||||||||||| |||  ||||||||| | ||||| | || | || | || ||| |||||||| ||| |||||||||||||||||    
T  387751 tataaagttattgatagttgattagtgggtcttatttaagaaatttgtgtgaaatgttggattgaatgaattgagtgcctatcagatactactattaaaa 387850  T
Q  468 tattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaatagat 523  Q
     ||||||||||||| ||||||||| ||| |||  ||||||| ||| |||| |||||    
T  387851 aattataaatgagttatgtgtacatgtgggactcatttaagcacccaaaattagat 387906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 369 - 499
Target Start/End: Complemental strand, 31743659 - 31743528
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctg-ggttggagtgattgagtgcttattagatactactattaaaa 467  Q
    |||||||||||| ||||||||||| ||  || ||||||| || | |||||||||| |  ||||| || |||||||| |||||||||||||||||||||||    
T  31743659 tataaagttattaatagttgattaatgtatctcatttaataaatttgtgtaagatgttcggttgaagggattgagttcttattagatactactattaaaa 31743560  T
Q  468 tattataaatgagtgatgtgtacacgtgagac 499  Q
    |||||||||||| | |||| |||||| |||||    
T  31743559 tattataaatgaattatgtatacacgcgagac 31743528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 508
Target Start/End: Complemental strand, 3705810 - 3705678
Alignment:
Q  377 tattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaatattataa 475  Q
    |||||||||||||||| ||| |  | |||||||| | |||||| ||| | || |||||  |||||| | |||||||| |||||||||||||| |||  ||    
T  3705810 tattgatagttgattaatgattttcctttaagaaatttgtgtatgatgcaggattggaaggattgaatacttattaggtactactattaaaaaattccaa 3705711  T
Q  476 atgagtgatgtgtacacgtgagacctatttaag 508  Q
    || |||||||||||| ||||| | |||||||||    
T  3705710 ataagtgatgtgtacgcgtgaaatctatttaag 3705678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 429 - 496
Target Start/End: Original strand, 3543286 - 3543353
Alignment:
Q  429 ttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtga 496  Q
    |||||| |||| ||| ||| ||||||| |||||||||||  |||||||||||| ||||||||||||||    
T  3543286 ttggagggattaagtacttgttagataatactattaaaaatttataaatgagtaatgtgtacacgtga 3543353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 489
Target Start/End: Original strand, 6321717 - 6321768
Alignment:
Q  438 ttgagtgcttattagatactactattaaaatattataaatgagtgatgtgta 489  Q
    ||||||||||| ||||||||| | |||||| |||||||||||||||||||||    
T  6321717 ttgagtgcttagtagatactagtgttaaaaaattataaatgagtgatgtgta 6321768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 372 - 452
Target Start/End: Complemental strand, 9491706 - 9491625
Alignment:
Q  372 aaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattag 452  Q
    |||||||||||||||||||||||  |||||||||| ||| | ||||| ||||  ||||||||||  ||| ||||||||||||    
T  9491706 aaagttattgatagttgattagtatgtcccatttatgaaatttgtgtgagatgatgggttggaggtatttagtgcttattag 9491625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 489
Target Start/End: Complemental strand, 3436068 - 3436015
Alignment:
Q  436 gattgagtgcttattagatactactattaaaatattataaatgagtgatgtgta 489  Q
    |||||| | ||||||||||| ||||||||||| |||| |||||| |||||||||    
T  3436068 gattgaatacttattagatattactattaaaaaattacaaatgaatgatgtgta 3436015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 423
Target Start/End: Complemental strand, 18804305 - 18804220
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat 423  Q
    ||||||||||||| |||||||| || | |  |||||| ||||||||||||||||||| ||| ||||||| ||| | ||||| ||||    
T  18804305 tttttaatattaataaattgaaatgtaataatataaaattattgatagttgattagtaagttccatttatgaaatttgtgtgagat 18804220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 407
Target Start/End: Complemental strand, 7879599 - 7879531
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaa 407  Q
    |||||||||| | |||||||| || |||| ||| || ||||| ||||||||| ||||||||||||||||    
T  7879599 ttttaatattgacaaattgaaatgtagtgatatgaatttattaatagttgatgagtgagtcccatttaa 7879531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 498
Target Start/End: Original strand, 12119735 - 12119791
Alignment:
Q  442 gtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgaga 498  Q
    |||||||||| | |||||| |||||| ||||||||||| |||| ||||||| |||||    
T  12119735 gtgcttattaaagactactgttaaaaaattataaatgactgatatgtacacatgaga 12119791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 2e-56; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 297 - 519
Target Start/End: Original strand, 52199756 - 52199979
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    |||||||| |||||||||| |  |||||| ||| |||||||  ||||||||||||||||||||| |  | || |||| | ||||||||||| ||||||||    
T  52199756 gggtcttacttaagacccctacttttaagggggacccgcactcttttaatattaaaaaattgaaatataatgatatataattattgatagtggattagtg 52199855  T
Q  396 agtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtg 495  Q
     |||||||||||||||| ||||| |||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||| |||| ||||||    
T  52199856 ggtcccatttaagaactttgtgtgagatctgggttggagtgattgaatgcttattaggtactactattaaaaaattataaatgagtgacgtgtgcacgtg 52199955  T
Q  496 agacctatttaagaacctaaaaat 519  Q
     |||| ||||||||||| ||||||    
T  52199956 ggacccatttaagaacccaaaaat 52199979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 307 - 527
Target Start/End: Complemental strand, 822541 - 822319
Alignment:
Q  307 taagacccccaactttaagcgggccccgcacgt-ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatt 404  Q
    ||||||||||||||||||||||  |||||||   ||||||||||||||||||||| || |||| ||||| |||||||||||||||||| || ||| ||||    
T  822541 taagacccccaactttaagcggaacccgcacaacttttaatattaaaaaattgaaatgtagtgatataatgttattgatagttgattaatgtgtctcatt 822442  T
Q  405 taagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatt 504  Q
    |||||||| ||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| | ||||||| | ||||||||||| |||  ||| |||    
T  822441 taagaactttgtgtgagatctgggttggagggattgagtacttattagatactactattaaaaaactataaataaatgatgtgtacatgtggaacccatt 822342  T
Q  505 taagaacctaaaaatagatatct 527  Q
    ||| ||||||||||| |||||||    
T  822341 taaaaacctaaaaatggatatct 822319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 279 - 519
Target Start/End: Original strand, 39055100 - 39055338
Alignment:
Q  279 aaggttttataagaatacgggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagtt 377  Q
    ||||| |||||||| |  |||||||||| |||||||| |||||||||  || ||||||| ||||||||||||||||||| || || | || |||||||||    
T  39055100 aaggtcttataagactcggggtcttatt-aagacccc-aactttaagtagggcccgcac-tttttaatattaaaaaattaaaatgtaatgatataaagtt 39055196  T
Q  378 attgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaat 477  Q
    |||||||||||||||||| ||  |||||||||||| ||||| ||||||| ||||||| |||| | | |||||||| ||||| |||||||| |||||||||    
T  39055197 attgatagttgattagtgggtttcatttaagaactttgtgtgagatctgagttggagggatttaatacttattaggtactaatattaaaaaattataaat 39055296  T
Q  478 gagtgatgtgtacacgtgagacctatttaagaacctaaaaat 519  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  39055297 gagtgatgtgtacgcgtgagacccatttaagaacctaaaaat 39055338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 297 - 527
Target Start/End: Complemental strand, 35332154 - 35331923
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    |||||||| |||||||||  |  ||||||| || | |||||  ||||||||||||||||||||| |  | || |||||||||||||||||||||||||||    
T  35332154 gggtcttacttaagacccaaacttttaagcaggacacgcactcttttaatattaaaaaattgaaatataatgatataaagttattgatagttgattagtg 35332055  T
Q  396 agtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtg 495  Q
      ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||  |||||||||||||| | ||||||| ||| ||||||| |||||    
T  35332054 gatcccatttaagaactttgtgtgagatctgggttggagtgattgagtgcttattatgtactactattaaaaaagtataaataagtaatgtgtatacgtg 35331955  T
Q  496 agacctatttaagaacctaaaaatagatatct 527  Q
     |||  |||||| |||| |||||| |||||||    
T  35331954 ggactcatttaacaaccaaaaaatggatatct 35331923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 297 - 521
Target Start/End: Complemental strand, 35382534 - 35382310
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    |||| ||| ||||||||| ||  |||||||||| ||| |||  |||||||||| |||||||||| |  | || |||||||||| ||||||||||||||||    
T  35382534 gggttttacttaagaccctcacttttaagcgggacccacactcttttaatatttaaaaattgaaatataatgatataaagttagtgatagttgattagtg 35382435  T
Q  396 agtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtg 495  Q
     ||| |||||||||||| ||||| | |||||||||||||||||||| |||||||||  |||||||||||||| ||||||||||| ||| ||||||||| |    
T  35382434 tgtctcatttaagaactttgtgtgaaatctgggttggagtgattgaatgcttattatgtactactattaaaaaattataaatgaatgaggtgtacacg-g 35382336  T
Q  496 agacctatttaagaacctaaaaatag 521  Q
    ||||| |||||| |||| ||||||||    
T  35382335 agacccatttaataacccaaaaatag 35382310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 285 - 519
Target Start/End: Complemental strand, 39629376 - 39629145
Alignment:
Q  285 ttataagaatacgggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgat 383  Q
    |||||||| || || ||||| ||||||||||||  ||||||| || | |||||  |||||||||||||||||||||    | || |||||| ||||||||    
T  39629376 ttataagactagggatcttacttaagacccccacttttaagcaggactcgcactcttttaatattaaaaaattgaaaaataatgatataaaattattgat 39629277  T
Q  384 agttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtga 483  Q
    ||||| ||||||  || |||||||||||| |||||  ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| | |||    
T  39629276 agttgtttagtggatctcatttaagaactttgtgtgtgatctgggttggagtgatttagtgcttattagatactactattaaaaaattataaataaatga 39629177  T
Q  484 tgtgtacacgtgagacctatttaagaacctaaaaat 519  Q
    ||||||    ||||||| ||||||||||| ||||||    
T  39629176 tgtgta----tgagacccatttaagaaccgaaaaat 39629145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 369 - 499
Target Start/End: Original strand, 23359128 - 23359258
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaat 468  Q
    ||||||||||||||||||||||| |||  || |||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||     
T  23359128 tataaagttattgatagttgatttgtggatctcatttaagaactttgtgtgagatctaggttggagtgattgagtgcttattagatactactattaaaaa 23359227  T
Q  469 attataaatgagtgatgtgtacacgtgagac 499  Q
    ||||||||||| ||||||||| | |||||||    
T  23359228 attataaatgaatgatgtgtatatgtgagac 23359258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 388 - 505
Target Start/End: Original strand, 45833894 - 45834010
Alignment:
Q  388 gattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtg 487  Q
    |||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||    
T  45833894 gattagtgggtcccatttaagaactttgtgtgagatctgggttggagtgattgagtgcttatta-atattactattaaaaaattataaatgagtgatgtg 45833992  T
Q  488 tacacgtgagacctattt 505  Q
    ||||||||||||| ||||    
T  45833993 tacacgtgagacccattt 45834010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 297 - 519
Target Start/End: Original strand, 2396252 - 2396475
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    |||||||| |||||||||| |  |||||| ||| ||| ||  |||||||||||||||| ||||| || | || |||||||||||||||||||||||||||    
T  2396252 gggtcttacttaagacccc-acttttaagagggaccctcaattttttaatattaaaaacttgaaatgtactgatataaagttattgatagttgattagtg 2396350  T
Q  396 agtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgt 494  Q
     || ||||||||||| | | ||| |||| ||| ||| ||| |||||||| |||||||| |||||||||||| | ||||||||| ||||||||||||||||    
T  2396351 ggttccatttaagaaatttttgtgagatgctgagtttgagcgattgagttcttattaggtactactattaacaaattataaataagtgatgtgtacacgt 2396450  T
Q  495 gagacctatttaagaacctaaaaat 519  Q
    | |||  ||||||||||| ||||||    
T  2396451 gggactcatttaagaacccaaaaat 2396475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 306 - 519
Target Start/End: Complemental strand, 10180775 - 10180561
Alignment:
Q  306 ttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatt 404  Q
    ||||||| |||||  ||||| ||| |||  || |||||||||||||||||||||  || | || ||||||||||||||||||||||| |||  || ||||    
T  10180775 ttaagacgcccaatcttaagtgggacccatacctttttaatattaaaaaattgatatgtaatgatataaagttattgatagttgatt-gtggatctcatt 10180677  T
Q  405 taagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctat 503  Q
    |||||| | |||||||||| || ||||||||  ||||||| |||||||| |||||||||||||| |||||||||||||||| ||||||||||||| | ||    
T  10180676 taagaaatttgtgtaagatgctaggttggaggcattgagttcttattaggtactactattaaaaaattataaatgagtgatatgtacacgtgagatccat 10180577  T
Q  504 ttaagaacctaaaaat 519  Q
    ||||| || |||||||    
T  10180576 ttaagtacttaaaaat 10180561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 298 - 521
Target Start/End: Original strand, 35144344 - 35144566
Alignment:
Q  298 ggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtga 396  Q
    |||||||||||||||||| || |||||| ||| ||| ||  |||| ||||||||||||||||| || | || |||||| ||||| || ||| || ||||     
T  35144344 ggtcttatttaagacccc-aattttaagtgggacccacatatttt-aatattaaaaaattgaaatgtaatggtataaaattattaatggtttatcagtgg 35144441  T
Q  397 gtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtga 496  Q
     | | ||||||||| | ||| | ||||||||||||||| |||||| ||||||||||||||||||| ||||| ||||||||| | |||| |||||||||||    
T  35144442 attctatttaagaaatttgtatgagatctgggttggagggattgaatgcttattagatactactactaaaaaattataaataattgatatgtacacgtga 35144541  T
Q  497 gacctatttaagaacctaaaaatag 521  Q
    |||| ||||||  ||| ||||||||    
T  35144542 gacccatttaaataccaaaaaatag 35144566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 369 - 508
Target Start/End: Complemental strand, 35309083 - 35308943
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaa 467  Q
    ||||||||||||||||||||||||||||||||||||||| ||   ||||| || | || || | ||| |||||||| ||||||||||| |||||||||||    
T  35309083 tataaagttattgatagttgattagtgagtcccatttaaaaaaattgtgtgagttgctaggctagagggattgagtacttattagatattactattaaaa 35308984  T
Q  468 tattataaatgagtgatgtgtacacgtgagacctatttaag 508  Q
     ||||||||| ||||| |||||| ||||||||  |||||||    
T  35308983 aattataaataagtgacgtgtacgcgtgagactcatttaag 35308943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 340 - 508
Target Start/End: Original strand, 49211023 - 49211194
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtga 437  Q
    |||||||||||||||||| || || | || |||||||||||||||| ||||||| || ||| |||||||| | | | ||| |||| || |||||||| ||    
T  49211023 ttttaatattaaaaaattaaaatgtaatgatataaagttattgataattgattaatgggtctcatttaaggaatttttgtgagatgctaggttggaggga 49211122  T
Q  438 ttgagtgcttattagatactactatt-aaaatattataaatgagtgatgtgtacacgtgagacctatttaag 508  Q
    | |||| ||||||||||||||||||| |||| ||||||||| | |||| ||||||||||| |||||||||||    
T  49211123 tagagttcttattagatactactattaaaaaaattataaataaatgatatgtacacgtgaaacctatttaag 49211194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 369 - 512
Target Start/End: Original strand, 8824989 - 8825129
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaat 468  Q
    ||||||||||||||||||||||||||  || ||||||||||| | | |||||||| ||| ||| ||| ||||| | |||||||||||||||   |||||     
T  8824989 tataaagttattgatagttgattagtaggttccatttaagaattttatgtaagatatggattgaagtaattgaatacttattagatactac---taaaaa 8825085  T
Q  469 attataaatgagtgatgtgtacacgtgagacctatttaagaacc 512  Q
    |||||||||||||||||| |||||||| |||  | |||||||||    
T  8825086 attataaatgagtgatgtatacacgtgtgactcaattaagaacc 8825129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 369 - 507
Target Start/End: Original strand, 51655153 - 51655295
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgag---tgcttattagatactactatta 464  Q
    |||||| |||||||||||||||||||  ||| ||||||| || | |||||||||| |||||||| |  ||||||    | |||||||||||||||| |||    
T  51655153 tataaaattattgatagttgattagttggtctcatttaataaatttgtgtaagatgctgggttgaaaggattgatcaattcttattagatactactgtta 51655252  T
Q  465 aaatattataaatgagtgatgtgtacacgtgagacctatttaa 507  Q
    |||||||||||||||||||||| ||||||||| ||| ||||||    
T  51655253 aaatattataaatgagtgatgtttacacgtgatacccatttaa 51655295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 348 - 500
Target Start/End: Original strand, 12447422 - 12447576
Alignment:
Q  348 ttaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgc 445  Q
    ||||||||||||| || | || ||||||||||||||||||||||||||| |||  ||||||||| | | ||| |||| |||||||  |  |||||||| |    
T  12447422 ttaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgggtcttatttaagaaatttttgtgagatgctgggttaaaaggattgagttc 12447521  T
Q  446 ttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacc 500  Q
    |||||| | ||||||||||||| ||||||||| |||||| ||||| |||||||||    
T  12447522 ttattatagactactattaaaaaattataaataagtgatttgtactcgtgagacc 12447576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 369 - 481
Target Start/End: Complemental strand, 38865075 - 38864966
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaat 468  Q
    |||||| || ||||||||||||| |||  ||||   |||||||| ||||| |||||||||||||||||||| ||||||| |||  ||||||||||||||     
T  38865075 tataaaattgttgatagttgattggtggatccc---taagaactttgtgtgagatctgggttggagtgattaagtgctttttaagtactactattaaaaa 38864979  T
Q  469 attataaatgagt 481  Q
    |||||||||||||    
T  38864978 attataaatgagt 38864966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 369 - 484
Target Start/End: Original strand, 22628494 - 22628610
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaa 467  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||  |||  |||||  ||| ||||||||| ||||||  |||| |||||||||    
T  22628494 tataaagttattgatagttgattagtgagtcccatttaaaaaatttgtgtgtgatattgggtcagagagattgagtgtttattatgtactcctattaaaa 22628593  T
Q  468 tattataaatgagtgat 484  Q
     |||||||| |||||||    
T  22628594 aattataaacgagtgat 22628610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 339 - 410
Target Start/End: Original strand, 30865886 - 30865958
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaa 410  Q
    |||||||||||||||||||||| || | || ||||||||||||||||||||||||||||||| ||||||||||    
T  30865886 tttttaatattaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgagtctcatttaagaa 30865958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 508
Target Start/End: Original strand, 44500489 - 44500659
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtgt-ataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtga 437  Q
    ||||||||||||||||||||| || | ||| |||||  |||||||||||||||||||| ||  |||| | ||   ||||| |||  ||| |||  || ||    
T  44500489 ttttaatattaaaaaattgaaatgtaatgttataaaactattgatagttgattagtgaatctaatttgaaaaaattgtgtgagaggctgagtttcaggga 44500588  T
Q  438 ttgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaag 508  Q
    || ||||||||||| |||||| ||||||||||||||||||||||||  ||||||||| ||| | |||||||    
T  44500589 ttaagtgcttattaaatactattattaaaatattataaatgagtgacatgtacacgtaagatccatttaag 44500659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 427 - 507
Target Start/End: Complemental strand, 42426930 - 42426850
Alignment:
Q  427 ggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaa 507  Q
    |||||||| ||||||||  |||||||||||||||||||||| ||||||||| ||| | |||||||||||||| | ||||||    
T  42426930 ggttggagggattgagtttttattagatactactattaaaaaattataaataagtaacgtgtacacgtgagatccatttaa 42426850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 436 - 507
Target Start/End: Original strand, 23607447 - 23607518
Alignment:
Q  436 gattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaa 507  Q
    |||||||| |||| |||||||||||||||||| ||||||||| ||| ||||||| |||||||||| ||||||    
T  23607447 gattgagttcttaatagatactactattaaaaaattataaataagtaatgtgtatacgtgagacccatttaa 23607518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 369 - 519
Target Start/End: Original strand, 26699032 - 26699183
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaa 467  Q
    |||||||||||| || ||||||||||| ||| |||||||||| | ||||| | || ||   ||| | ||||||||| ||||||||||| |||||||||||    
T  26699032 tataaagttattaatcgttgattagtgtgtctcatttaagaaatttgtgtgaaatgctatattgaaatgattgagttcttattagatattactattaaaa 26699131  T
Q  468 tattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaat 519  Q
      ||||||  |||||||||||||| ||| || | ||||||| ||| ||||||    
T  26699132 atttataagcgagtgatgtgtacatgtgggatccatttaagtacccaaaaat 26699183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 369 - 475
Target Start/End: Complemental strand, 53096706 - 53096599
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaa 467  Q
    ||||||||||||||||||||||||||  |||||||||||||| | ||||| ||||  ||||||  || |||||||| |||||||  || |||||||||||    
T  53096706 tataaagttattgatagttgattagttggtcccatttaagaaatttgtgtgagatgttgggttaaagggattgagttcttattaagtattactattaaaa 53096607  T
Q  468 tattataa 475  Q
     |||||||    
T  53096606 aattataa 53096599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 376 - 521
Target Start/End: Complemental strand, 8489588 - 8489442
Alignment:
Q  376 ttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaatattata 474  Q
    |||||||||||||||||||||||||||||||| ||     ||| |||| |||||||| |  ||| ||||  ||| || |||| |||||||||| ||||||    
T  8489588 ttattgatagttgattagtgagtcccatttaaaaataaattgtgagatgctgggttgcaaggatagagtttttaatacataccactattaaaaaattata 8489489  T
Q  475 aatgagtgatgtgtacacgtgagacctatttaagaacctaaaaatag 521  Q
    ||| |||||||| ||||||| ||||| ||||||  | ||||||||||    
T  8489488 aataagtgatgtatacacgtaagacccatttaaatatctaaaaatag 8489442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 410
Target Start/End: Original strand, 43968777 - 43968848
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaa 410  Q
    |||||||||||||||||| || |  |||| ||||||||||||||||||||||||||| |||| |||||||||    
T  43968777 ttttaatattaaaaaattaaaatatagtgatataaagttattgatagttgattagtgggtcctatttaagaa 43968848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 446 - 520
Target Start/End: Complemental strand, 28909500 - 28909426
Alignment:
Q  446 ttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaata 520  Q
    ||||||||||||||| |||||| |||||||||||| ||||| |||||||||||   |||||| |||| |||||||    
T  28909500 ttattagatactactgttaaaaaattataaatgagcgatgtatacacgtgagattcatttaataacccaaaaata 28909426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 437 - 508
Target Start/End: Original strand, 28897685 - 28897756
Alignment:
Q  437 attgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaag 508  Q
    |||||||||||||||  ||||| | |||||| |||||||||||||||| | ||||||||||||  |||||||    
T  28897685 attgagtgcttattaattactaattttaaaaaattataaatgagtgatatatacacgtgagactcatttaag 28897756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 410
Target Start/End: Complemental strand, 2574218 - 2574106
Alignment:
Q  299 gtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgag 397  Q
    |||| |||||||||  ||||  |||||||||  || |||  |||||| |||||||||||||| || | || |||||||||||| |||||||||||||||     
T  2574218 gtctcatttaagacttccaatcttaagcgggatccacactcttttaacattaaaaaattgaaatgtaatgatataaagttattaatagttgattagtgaa 2574119  T
Q  398 tcccatttaagaa 410  Q
    | | |||||||||    
T  2574118 ttctatttaagaa 2574106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 429 - 489
Target Start/End: Complemental strand, 17058823 - 17058763
Alignment:
Q  429 ttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgta 489  Q
    ||||||| ||||||| |||| ||| ||||  |||||||||||||||||| |||||||||||    
T  17058823 ttggagtcattgagtccttaatagctacttttattaaaatattataaataagtgatgtgta 17058763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 481
Target Start/End: Complemental strand, 25436032 - 25435889
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatct-gggttggagtg 436  Q
    |||| ||||||| ||||||||| || | || |||||||||||||||| | |||||||   |||||||||| || | ||||| |||| | |||||| || |    
T  25436032 ttttaaatattataaaattgaaatgtaatgctataaagttattgataatggattagtcgatcccatttaaaaaat-tgtgtgagatgttgggttgaagag 25435934  T
Q  437 attgagtgcttattagatactactattaaaatattataaatgagt 481  Q
    ||||| | ||||||| |||||| |||||| | |||||||||||||    
T  25435933 attgaatacttattaaatactattattaataaattataaatgagt 25435889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 410
Target Start/End: Complemental strand, 31262545 - 31262471
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattg---atagttgattagtgagtcccatttaagaa 410  Q
    ||||||||||||||||||||| || | || |||||||||||||   |||||||||||||| |||||||| |||||    
T  31262545 ttttaatattaaaaaattgaaatgtaatggtataaagttattgttgatagttgattagtgggtcccattaaagaa 31262471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 5036130 - 5036067
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaa 360  Q
    |||||||| ||||||||| ||| |||||||||| | | |||  |||||||||||||||||||||    
T  5036130 gggtcttaattaagaccctcaattttaagcgggactctcactcttttaatattaaaaaattgaa 5036067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 470 - 521
Target Start/End: Complemental strand, 54018452 - 54018401
Alignment:
Q  470 ttataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaatag 521  Q
    |||||||||||||||||||||| |||| ||||||||||  ||| ||||||||    
T  54018452 ttataaatgagtgatgtgtacatgtgatacctatttaaatacccaaaaatag 54018401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 509
Target Start/End: Complemental strand, 22425060 - 22424974
Alignment:
Q  423 tctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaaga 509  Q
    |||| ||||||||| |||||| | |||||| ||||| |||||||| ||||| ||  |||||||||| || |||  ||||||||||||    
T  22425060 tctgtgttggagtggttgagtacctattaggtactattattaaaaaattatcaaaaagtgatgtgtccatgtggaacctatttaaga 22424974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 491
Target Start/End: Original strand, 30865978 - 30866024
Alignment:
Q  445 cttattagatactactattaaaatattataaatgagtgatgtgtaca 491  Q
    |||||||| |||||||||||||| ||||||| |||||||||| ||||    
T  30865978 cttattaggtactactattaaaaaattataagtgagtgatgtataca 30866024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 488
Target Start/End: Original strand, 44540009 - 44540051
Alignment:
Q  446 ttattagatactactattaaaatattataaatgagtgatgtgt 488  Q
    |||||||||||| |||||||||  |||||||||||||||||||    
T  44540009 ttattagatactgctattaaaaatttataaatgagtgatgtgt 44540051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 401
Target Start/End: Original strand, 45804010 - 45804044
Alignment:
Q  367 tgtataaagttattgatagttgattagtgagtccc 401  Q
    |||||| ||||||||||||||||||||||||||||    
T  45804010 tgtatatagttattgatagttgattagtgagtccc 45804044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 500
Target Start/End: Complemental strand, 28967384 - 28967347
Alignment:
Q  463 taaaatattataaatgagtgatgtgtacacgtgagacc 500  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  28967384 taaaaaattataaatgaatgatgtgtacacgtgagacc 28967347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 429 - 509
Target Start/End: Original strand, 36219162 - 36219242
Alignment:
Q  429 ttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaaga 509  Q
    ||||||||||||||| | |||||| ||||| |||||||| || |||||  |||||||| | || ||||||||  |||||||    
T  36219162 ttggagtgattgagtacctattaggtactattattaaaaaataataaaaaagtgatgtattcatgtgagacccgtttaaga 36219242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 436 - 492
Target Start/End: Original strand, 41115940 - 41115996
Alignment:
Q  436 gattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacac 492  Q
    |||||| || |||||||||||||||||| ||| | ||||||| |||||| |||||||    
T  41115940 gattgaatgtttattagatactactatttaaaaactataaataagtgatatgtacac 41115996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 360
Target Start/End: Original strand, 45832521 - 45832585
Alignment:
Q  297 gggtcttatttaagacccccaacttt-aagcgggccccgcacgtttttaatattaaaaaattgaa 360  Q
    |||||||| ||||||||||| ||||| |||||||  ||||||  ||||||||||||||| |||||    
T  45832521 gggtcttacttaagaccccctacttttaagcgggatccgcacccttttaatattaaaaatttgaa 45832585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 3e-55; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 297 - 521
Target Start/End: Complemental strand, 46006248 - 46006024
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    |||||||| ||||||| ||||  |||||||| | || ||||  |||||||||||||||||| || |  | || |||||||||||||||||||||||| ||    
T  46006248 gggtcttacttaagacgcccacttttaagcgtgacctgcactcttttaatattaaaaaattaaaatataatgatataaagttattgatagttgattactg 46006149  T
Q  396 agtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtg 495  Q
     |||  ||||||||||| |||||||||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  46006148 ggtcaaatttaagaactttgtgtaagatctgggttggagtgattgaatg-ttattaggtactactattaaaaaattataaatgagtgatgtgtacacgtg 46006050  T
Q  496 agacctatttaagaacctaaaaatag 521  Q
    |||||||| ||| |||| ||||||||    
T  46006049 agacctatctaaaaacccaaaaatag 46006024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 369 - 512
Target Start/End: Original strand, 35539616 - 35539759
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaat 468  Q
    |||||||||||||||||||||||| || |||||||||||||||| ||||| |||||| |||||||||||| ||||| ||||||| ||||||||||||||     
T  35539616 tataaagttattgatagttgattaatgggtcccatttaagaactttgtgtgagatcttggttggagtgatcgagtgtttattaggtactactattaaaaa 35539715  T
Q  469 attataaatgagtgatgtgtacacgtgagacctatttaagaacc 512  Q
    ||||||||| | |||||||||||||||||||  |||||||||||    
T  35539716 attataaataaatgatgtgtacacgtgagactcatttaagaacc 35539759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 369 - 500
Target Start/End: Complemental strand, 13768649 - 13768520
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaat 468  Q
    ||||||||||||||||||||||| ||| |||||||||||||| | ||||||||  | | ||| ||| |||||||| |||||||  ||||||||||||||     
T  13768649 tataaagttattgatagttgatttgtgggtcccatttaagaaatttgtgtaag--cagtgttagagggattgagttcttattaagtactactattaaaaa 13768552  T
Q  469 attataaatgagtgatgtgtacacgtgagacc 500  Q
    ||||||||||||||||||||||||||| ||||    
T  13768551 attataaatgagtgatgtgtacacgtgggacc 13768520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 368 - 519
Target Start/End: Original strand, 46048908 - 46049061
Alignment:
Q  368 gtataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactatt-aa 465  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||| |||| ||| ||||||| |||||  | |||||||| ||||| |||| ||    
T  46048908 gtataaagttattgatagttgatttgtgagttccatttaagaactttgtgtgagatgctgagttggagggattggatacttattaggtactaatattaaa 46049007  T
Q  466 aatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaat 519  Q
    || ||||||||||||| |||| |||| |||||||| ||||||| || |||||||    
T  46049008 aaaattataaatgagtaatgtttacatgtgagacccatttaagtacttaaaaat 46049061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 369 - 500
Target Start/End: Complemental strand, 13755248 - 13755119
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaat 468  Q
    |||||||||||||||||||||||  || |||||||||||||| | ||||| ||  | ||||| ||| |||||||| |||||||  ||||||||||||||     
T  13755248 tataaagttattgatagttgatttttgggtcccatttaagaaatttgtgtgag--cagggttagagggattgagttcttattaagtactactattaaaaa 13755151  T
Q  469 attataaatgagtgatgtgtacacgtgagacc 500  Q
    ||||||||||||||||||||||||||| ||||    
T  13755150 attataaatgagtgatgtgtacacgtgggacc 13755119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 425 - 523
Target Start/End: Original strand, 36619242 - 36619339
Alignment:
Q  425 tgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaatagat 523  Q
    |||||||| | |||||| | ||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||    
T  36619242 tgggttggggggattgaatacttattagata-tactattaaaaaattataaatcagtgatgtgtacacgtgagacccatttaagtacctaaaaatagat 36619339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 449 - 519
Target Start/End: Original strand, 55222597 - 55222667
Alignment:
Q  449 ttagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaat 519  Q
    ||||||||||||||||||| ||||||||||| |||| ||||||||||||||| ||||||||||||||||||    
T  55222597 ttagatactactattaaaaaattataaatgactgatatgtacacgtgagacccatttaagaacctaaaaat 55222667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 339 - 517
Target Start/End: Original strand, 26085062 - 26085232
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagt-gtataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtga 437  Q
    |||||||||||||||||||||| |  | | |||||||||||||||| |||||| |||| |||||||||||||| | | ||| | ||||||||||||| ||    
T  26085062 tttttaatattaaaaaattgaaatataatggtataaagttattgatggttgataagtgtgtcccatttaagaaatttatgtgaaatctgggttggaggga 26085161  T
Q  438 ttgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaa 517  Q
    || |||         ||  ||| ||||||| ||||||||||| |||||||||||||||||||| ||||||| ||| ||||    
T  26085162 ttaagt---------attttacaattaaaaaattataaatgaatgatgtgtacacgtgagacccatttaagtaccaaaaa 26085232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 36902451 - 36902283
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgat 438  Q
    |||||||||||||||||| || |  | || |||||||||||||||||||||||||||| |  |||||||||| | ||| | ||||||| |||| |   ||    
T  36902451 ttttaatattaaaaaattaaaatataatgatataaagttattgatagttgattagtgaatttcatttaagaaatttgtttgagatctgagttgaaagtat 36902352  T
Q  439 tgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaa 507  Q
    |||||  |||||||||| |||| |||||| |||| ||| |||| |||||| |||||| |||| ||||||    
T  36902351 tgagtatttattagatattactgttaaaaaattaaaaaagagttatgtgttcacgtgtgacccatttaa 36902283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 432 - 486
Target Start/End: Complemental strand, 29950820 - 29950766
Alignment:
Q  432 gagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgt 486  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  29950820 gagtgattgagtgcttattagatactactattaaaaaaatataaatgagtgatgt 29950766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 432 - 486
Target Start/End: Complemental strand, 29999974 - 29999920
Alignment:
Q  432 gagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgt 486  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  29999974 gagtgattgagtgcttattagatactactattaaaaaaatataaatgagtgatgt 29999920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 340 - 523
Target Start/End: Complemental strand, 30595209 - 30595024
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgg-gttggagtga 437  Q
    ||||| |||||||||||| || || | || |||||| |||||||||||||||||||||||| |||||||    | | ||| | || | | ||||||| ||    
T  30595209 ttttagtattaaaaaatttaaatgtaatgatataaaattattgatagttgattagtgagtctcatttaaattttttttgtgaaatgttgagttggagaga 30595110  T
Q  438 ttgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaatagat 523  Q
    |||| | |||||||||||||| |||||||| ||||||||  |||||| | |||||| |||| ||||||||  ||| ||||||||||    
T  30595109 ttgaattcttattagatactattattaaaaaattataaacaagtgatatatacacgcgagaactatttaaatacccaaaaatagat 30595024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 439 - 511
Target Start/End: Complemental strand, 24744445 - 24744374
Alignment:
Q  439 tgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaac 511  Q
    ||||||||||||| | |||  |||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  24744445 tgagtgcttatta-agactgttattaaaagattataaaagagtgatgtgtacacgtgagacctatttaagaac 24744374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 489
Target Start/End: Original strand, 41211973 - 41212130
Alignment:
Q  333 cgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctggg-tt 430  Q
    ||||| |||||||||||||||| || || || | || ||||||||||||||||||||||||||  ||| ||||||||||   ||| | |||| |  | ||    
T  41211973 cgcacctttttaatattaaaaa-ttaaaatgtaatgatataaagttattgatagttgattagtatgtctcatttaagaaacttgtatgagatgttcgatt 41212071  T
Q  431 ggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgta 489  Q
    |||| |||| | |||||||||| ||||||||||| || ||||||||||||| |||||||    
T  41212072 ggagggatttactgcttattaggtactactattacaaaattataaatgagttatgtgta 41212130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 343 - 520
Target Start/End: Complemental strand, 45603563 - 45603381
Alignment:
Q  343 taatattaaaaaattgaagtgcagtg-tataaagttatt---gatagttgattagtgagtcccatttaagaactgtgtgtaagatctggg-ttggagtga 437  Q
    |||||||||||||||||| || || | |||||||||| |   |||| |||||||||| ||| ||||||| || | ||||| |||| | || ||  || ||    
T  45603563 taatattaaaaaattgaaatgtagggatataaagttaataatgatatttgattagtgggtcacatttaaaaaatttgtgtgagatgttggatttaaggga 45603464  T
Q  438 ttgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaata 520  Q
    ||||||| ||||||  ||||| ||||| || ||||||||||| ||||||||| |||||||||  ||||||| ||| |||||||    
T  45603463 ttgagtgtttattaagtactattattataaaattataaatgaatgatgtgtatacgtgagactcatttaagtaccaaaaaata 45603381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 437 - 499
Target Start/End: Complemental strand, 40242214 - 40242152
Alignment:
Q  437 attgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagac 499  Q
    |||||||||||||||| || ||||||||||| ||||||||| |||||| | ||||||||||||    
T  40242214 attgagtgcttattaggtattactattaaaaaattataaataagtgatatatacacgtgagac 40242152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 507
Target Start/End: Complemental strand, 1559596 - 1559518
Alignment:
Q  429 ttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaa 507  Q
    ||||||| ||||||| |||| |||||| |  |||||||  ||||||||| ||||||||||||||||| || ||||||||    
T  1559596 ttggagttattgagttcttaatagatatttttattaaacaattataaataagtgatgtgtacacgtgtgatctatttaa 1559518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 496
Target Start/End: Original strand, 28197541 - 28197591
Alignment:
Q  446 ttattagatactactattaaaatattataaatgagtgatgtgtacacgtga 496  Q
    |||||||||  ||||||||||| ||||| ||||||||||||||||||||||    
T  28197541 ttattagatgttactattaaaaaattatgaatgagtgatgtgtacacgtga 28197591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 409
Target Start/End: Complemental strand, 47075683 - 47075605
Alignment:
Q  332 ccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaaga 409  Q
    |||||| |||||||||||||||||||||  || | || |||||| |||| ||||||||||||||||||| | |||||||    
T  47075683 ccgcacatttttaatattaaaaaattgatatgtaatgatataaaattatagatagttgattagtgagtctcgtttaaga 47075605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 457 - 518
Target Start/End: Original strand, 44110945 - 44111006
Alignment:
Q  457 tactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaa 518  Q
    ||||||||||| ||||||||||| | ||||||||||||| |||| ||||||| || ||||||    
T  44110945 tactattaaaaaattataaatgaattatgtgtacacgtgtgacccatttaagtacttaaaaa 44111006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 442 - 507
Target Start/End: Original strand, 54425526 - 54425591
Alignment:
Q  442 gtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaa 507  Q
    ||||||||||| |||||||||||||| | ||||||||| | || |||||||||| |||| ||||||    
T  54425526 gtgcttattaggtactactattaaaaaactataaatgaataatatgtacacgtgtgacccatttaa 54425591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 427 - 495
Target Start/End: Complemental strand, 40861271 - 40861203
Alignment:
Q  427 ggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtg 495  Q
    |||| ||| |||||| | ||||||||||||||| ||||||| ||||||||||  |||||| ||||||||    
T  40861271 ggttagagagattgaatacttattagatactacaattaaaaaattataaatggatgatgtatacacgtg 40861203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 508
Target Start/End: Complemental strand, 52744750 - 52744678
Alignment:
Q  436 gattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaag 508  Q
    |||||||| ||| |||| |  ||||||||||| ||||||||| ||| |||||||||||||||||  |||||||    
T  52744750 gattgagtacttgttaggtgttactattaaaaaattataaataagtaatgtgtacacgtgagactcatttaag 52744678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 489
Target Start/End: Complemental strand, 36277910 - 36277738
Alignment:
Q  323 aagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg----tataaagttattgatagttgattagtgagtcccatttaagaac-tgtgtg 417  Q
    ||||||| | |||||  ||||||||||||||||||||| || | |     |||||||||||||||| || ||||||| ||   |||||| ||  | ||||    
T  36277910 aagcgggactcgcactcttttaatattaaaaaattgaaatgtaataatgatataaagttattgatattttattagtgggtttaatttaaaaaaatttgtg 36277811  T
Q  418 taagat-ctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgta 489  Q
    | |||| ||| |||||||  ||||| | ||||||||||| ||||||||||| ||||||||| |||| ||||||    
T  36277810 tgagatgctgagttggaggaattgaatacttattagatattactattaaaaaattataaattagtgctgtgta 36277738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 499
Target Start/End: Complemental strand, 49109156 - 49109025
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaa 467  Q
    |||||| ||||||||||||| ||||||  | |||||||| || | ||| | |||| || |||| ||| ||||||||||||||||| |||||||| | |||    
T  49109156 tataaatttattgatagttggttagtggattccatttaaaaaatatgtatgagatgctcggtttgagagattgagtgcttattaggtactactaatgaaa 49109057  T
Q  468 tattataaatgagtgatgtgtacacgtgagac 499  Q
      |||||||| | | || ||||| ||||||||    
T  49109056 agttataaataaataatttgtacgcgtgagac 49109025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 444
Target Start/End: Original strand, 54422720 - 54422826
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtg 436  Q
    |||||| ||||||||||||||| || | || |||||| ||||||||| |||||||||| ||| |||||||||| | || || |||| || |||||||| |    
T  54422720 tttttagtattaaaaaattgaa-tgtaatgatataaaattattgataattgattagtgggtctcatttaagaaatttgcgttagatactaggttggagag 54422818  T
Q  437 attgagtg 444  Q
    ||||||||    
T  54422819 attgagtg 54422826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 432 - 527
Target Start/End: Original strand, 55272859 - 55272954
Alignment:
Q  432 gagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaatagatatct 527  Q
    ||||||||||||| ||||||  ||||| |||||||| |||||||||||||  ||| |||| | ||||   ||||||||||  |||||| |||||||    
T  55272859 gagtgattgagtgtttattatgtactattattaaaaaattataaatgagtattgtttacatgcgagatgcatttaagaactcaaaaatggatatct 55272954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 360
Target Start/End: Original strand, 35539517 - 35539579
Alignment:
Q  299 gtcttatttaagaccccc-aactttaagcgggccccgcacgtttttaatattaaaaaattgaa 360  Q
    |||||| ||||||||||| || |||||| ||| ||||||| |||||||||||||||| |||||    
T  35539517 gtcttacttaagaccccccaattttaagtgggacccgcacttttttaatattaaaaagttgaa 35539579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 429 - 489
Target Start/End: Complemental strand, 1151603 - 1151543
Alignment:
Q  429 ttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgta 489  Q
    ||||||| ||||||| |||| ||  ||||  |||||||||||||||||| |||||||||||    
T  1151603 ttggagttattgagtccttaataagtacttttattaaaatattataaataagtgatgtgta 1151543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 7e-44; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 298 - 527
Target Start/End: Original strand, 7293000 - 7293230
Alignment:
Q  298 ggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtga 396  Q
    |||||||||||||||| ||||||||||||||| |    ||| ||||||||||||||||||||| || | || ||||| ||||||||||||| ||||||||    
T  7293000 ggtcttatttaagacctccaactttaagcggggcttatacgcttttaatattaaaaaattgaaatgtaatgatataatgttattgatagttaattagtga 7293099  T
Q  397 gtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtga 496  Q
    |||| |||||| |||| ||||| |||| ||||| |||| || ||| | ||||| || || ||||||||||| ||||||||||| ||||||| || ||||     
T  7293100 gtcctatttaaaaactttgtgtgagatttgggtcggagggaatgaatacttataaggtattactattaaaaaattataaatgaatgatgtgcacgcgtgg 7293199  T
Q  497 gacctatttaagaacctaaaaatagatatct 527  Q
    |||| ||||||||||| |||||| |||||||    
T  7293200 gacccatttaagaacccaaaaatggatatct 7293230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 321 - 519
Target Start/End: Complemental strand, 41521009 - 41520809
Alignment:
Q  321 ttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgta 419  Q
    ||||| ||| ||| ||| ||||||||| |||||||||||  || | || ||||||||||||||||||| ||| ||| |||||||||| ||||| |||||     
T  41521009 ttaagtgggacccacacctttttaatagtaaaaaattgatatgtaatggtataaagttattgatagttaatttgtgggtcccatttaggaactttgtgtg 41520910  T
Q  420 agat-ctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaa 518  Q
    |||| ||||||||||| |||||||| |||||||| ||| |||||||||| ||||||||| |||||||||||||||||| ||| ||||||||||| |||||    
T  41520909 agatgctgggttggagggattgagttcttattaggtaccactattaaaaaattataaataagtgatgtgtacacgtgaaacccatttaagaaccaaaaaa 41520810  T
Q  519 t 519  Q
    |    
T  41520809 t 41520809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 297 - 519
Target Start/End: Complemental strand, 18396688 - 18396466
Alignment:
Q  297 gggtcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtg 395  Q
    ||||||||||||||||||||||||||||||||| || ||| | ||||||||||||||||||||| |   ||| |||||||||||| |||||||||| |||    
T  18396688 gggtcttatttaagacccccaactttaagcggggcc-gcatgcttttaatattaaaaaattgaaatattgtgatataaagttatttatagttgattggtg 18396590  T
Q  396 agtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtg 495  Q
     |||||||||||||  | ||||| |||||   ||| |||  |||||||  ||||||| ||||| |||||||| |||||||||||| ||||||||| ||||    
T  18396589 ggtcccatttaagatttttgtgtgagatccaagttagaggaattgagtatttattaggtactattattaaaaaattataaatgagggatgtgtacgcgtg 18396490  T
Q  496 agacctatttaagaacctaaaaat 519  Q
     |||| |||||| |||| ||||||    
T  18396489 tgacccatttaaaaacccaaaaat 18396466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 340 - 519
Target Start/End: Complemental strand, 26675607 - 26675427
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgat 438  Q
    ||||||||||||||||||||||||   || |||||||||||||||| |||||||||| |||  ||||||||| | | ||| ||||||| ||||||  |||    
T  26675607 ttttaatattaaaaaattgaagtgtgatgatataaagttattgatatttgattagtgggtctaatttaagaaatttatgtgagatctgagttggaaggat 26675508  T
Q  439 tgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaat 519  Q
    | ||||||||| ||||||||||||||||| |||||||||||||||||||||||  ||||||| ||||| | ||| ||||||    
T  26675507 taagtgcttataagatactactattaaaaaattataaatgagtgatgtgtacatatgagacccatttaggtacccaaaaat 26675427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 340 - 519
Target Start/End: Complemental strand, 26947215 - 26947035
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgat 438  Q
    ||||||||||||||||||||||||   || |||||||||||||||| |||||||||| |||  ||||||||| | | ||| ||||||| ||||||  |||    
T  26947215 ttttaatattaaaaaattgaagtgtgatgatataaagttattgatatttgattagtgggtctaatttaagaaatttatgtgagatctgagttggaaggat 26947116  T
Q  439 tgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaat 519  Q
    | ||||||||| ||||||||||||||||| |||||||||||||||||||||||  ||||||| ||||| | ||| ||||||    
T  26947115 taagtgcttataagatactactattaaaaaattataaatgagtgatgtgtacatatgagacccatttaggtacccaaaaat 26947035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 340 - 519
Target Start/End: Complemental strand, 1309890 - 1309710
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgat 438  Q
    |||||||||||||||||| || |  | || |||||| ||||||||| ||||||||||  ||| ||||||||||| ||||| |||| ||| ||||||||||    
T  1309890 ttttaatattaaaaaattaaaatataatgatataaaattattgataattgattagtgtatccaatttaagaactttgtgtgagatttggattggagtgat 1309791  T
Q  439 tgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaat 519  Q
    |||||||||||||||||||| |||||||| ||||||||| | |||| | |||||||| |||  |||||| |||||||||||    
T  1309790 tgagtgcttattagatactattattaaaaaattataaataaatgatatatacacgtgggactcatttaaaaacctaaaaat 1309710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 340 - 521
Target Start/End: Complemental strand, 13420836 - 13420654
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgat 438  Q
    ||||||||||||||||||||| |  | |  ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||  |||||||||||    
T  13420836 ttttaatattaaaaaattgaaatataattatataaagttattgatagttgattagtgagtcccatttaacaactttgtgtgagatctaagttggagtgat 13420737  T
Q  439 tgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtg-agacctatttaagaacctaaaaatag 521  Q
     ||||| ||||||  ||| |||||||||| |||| |||| |||||||| || ||||| ||||| ||||||||||| ||||||||    
T  13420736 cgagtgattattaagtaccactattaaaa-attacaaataagtgatgtatatacgtgaagacccatttaagaacccaaaaatag 13420654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 300 - 443
Target Start/End: Complemental strand, 42951900 - 42951756
Alignment:
Q  300 tcttatttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagt 398  Q
    ||||||||||||||||||| ||||| ||||  |||||  |||||||||||||||||||||| || |||| |||||| ||||||||| |||||||||| ||    
T  42951900 tcttatttaagacccccaattttaaacggggtccgcatatttttaatattaaaaaattgaaatgtagtgatataaaattattgataattgattagtgggt 42951801  T
Q  399 cccatttaagaactgtgtgtaagatctgggttggagtgattgagt 443  Q
    | |||||||||||| ||||| ||||||| ||||||| ||||||||    
T  42951800 ctcatttaagaactttgtgtgagatctgagttggagggattgagt 42951756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 369 - 483
Target Start/End: Original strand, 2375574 - 2375688
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaat 468  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||| |||| || | | |||||||||| || ||||||| ||||||||||||||     
T  2375574 tataaagttattgatagttgattagtgggtcccatttaagaactttgtgtgagatttgaggttgagtgattgaatgtttattaggtactactattaaaaa 2375673  T
Q  469 attataaatgagtga 483  Q
    ||||||||| |||||    
T  2375674 attataaataagtga 2375688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 298 - 452
Target Start/End: Original strand, 13486535 - 13486693
Alignment:
Q  298 ggtcttatttaagacccccaactttaagcgg---gccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattag 393  Q
    ||||||| |||||||||||   |||||||||   | |||||||  ||||||||||||||||||||| |  | || ||||||||||||||||| |||||||    
T  13486535 ggtcttacttaagacccccgcttttaagcggcgagacccgcactattttaatattaaaaaattgaaatataatgatataaagttattgatagctgattag 13486634  T
Q  394 tgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattag 452  Q
    || || |||||||| |||| ||||  |||||| ||||||||||||||||||||||||||    
T  13486635 tgggttccatttaaaaactttgtgagagatctaggttggagtgattgagtgcttattag 13486693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 306 - 508
Target Start/End: Original strand, 12593087 - 12593291
Alignment:
Q  306 ttaagacccccaactttaagcgggccccgcacgtttttaatattaaaaaa-ttgaagtgcagtg-tataaagttattgatagttgattagtgagtcccat 403  Q
    ||||||||||||| |||||||    ||| |||  |||||||||||||||| || || || | || |||||||||||||||| |||||||||  ||| |||    
T  12593087 ttaagacccccaattttaagcaaaacccacactcttttaatattaaaaaagttaaaatgtaatgatataaagttattgataattgattagttggtctcat 12593186  T
Q  404 ttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctat 503  Q
    ||||||| | ||| | |||  ||||   | | || ||||| |||||||||||||||||||||||  |||||||||||||||||||||||||| |||| ||    
T  12593187 ttaagaaatttgtttgagacgtggggatgggggaatgagtacttattagatactactattaaaaagttataaatgagtgatgtgtacacgtgtgaccaat 12593286  T
Q  504 ttaag 508  Q
    |||||    
T  12593287 ttaag 12593291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 369 - 478
Target Start/End: Complemental strand, 33133345 - 33133236
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaa 467  Q
    |||||||||||||||||||||||||||||||  ||||||||| | ||||| |||| ||| ||| ||| ||||||||||||| || ||| |||||||||||    
T  33133345 tataaagttattgatagttgattagtgagtcttatttaagaaatttgtgtgagatgctgagtttgagagattgagtgctta-taaatattactattaaaa 33133247  T
Q  468 tattataaatg 478  Q
      |||||||||    
T  33133246 atttataaatg 33133236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 339 - 519
Target Start/End: Complemental strand, 837874 - 837694
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtg 436  Q
    ||||||||||||||| |||||| || | || |||||| |||| |||||||  |||||  ||  |||||||||| | | ||| |||| |||||||| || |    
T  837874 tttttaatattaaaatattgaaatgtaatgatataaaattatagatagtt--ttagtttgtttcatttaagaaatttatgtgagatactgggttgaagag 837777  T
Q  437 attgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaat 519  Q
    ||||||||||||||||||| | || ||||||  ||||||||||||||||| |||||||   ||| ||||| ||||| ||||||    
T  837776 attgagtgcttattagatattgctgttaaaaatttataaatgagtgatgtatacacgttgaacccatttacgaaccaaaaaat 837694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 377 - 491
Target Start/End: Original strand, 25324196 - 25324309
Alignment:
Q  377 tattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaatattataaa 476  Q
    |||| ||| |||||||||| || ||||||||||| | |||| ||| | ||||||||||  ||||||||  ||||||||| ||||||||||| ||||||||    
T  25324196 tatttataattgattagtgtgttccatttaagaaatttgtg-aagttttgggttggagaaattgagtgtatattagatattactattaaaaaattataaa 25324294  T
Q  477 tgagtgatgtgtaca 491  Q
    ||| |||| ||||||    
T  25324295 tgaatgatttgtaca 25324309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 369 - 492
Target Start/End: Original strand, 29558363 - 29558486
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaa 467  Q
    |||||| ||||||||||||||||| |   ||  ||||||||| | ||||| |||| ||| |||| || |||| |||||||||||| ||||| ||||||||    
T  29558363 tataaaattattgatagttgattattagatcttatttaagaaatttgtgtgagatgctgagttgaagagattaagtgcttattag-tactattattaaaa 29558461  T
Q  468 tattataaatgagtgatgtgtacac 492  Q
     ||| ||||||||||||||||||||    
T  29558462 aattgtaaatgagtgatgtgtacac 29558486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 523
Target Start/End: Complemental strand, 1666870 - 1666716
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaa 467  Q
    |||||||||||||||||||||||| |   | ||||||||||| |  |||||| || ||||||||||| |||||||||||||| |  |||||   ||||||    
T  1666870 tataaagttattgatagttgattattagattccatttaagaaattcgtgtaaaatgctgggttggagagattgagtgcttataaagtactagagttaaaa 1666771  T
Q  468 tattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaatagat 523  Q
     ||||||| | | |||||||||||||||| | | ||||||| | | ||||||||||    
T  1666770 -attataagtaaatgatgtgtacacgtgaaatccatttaagtatcaaaaaatagat 1666716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 457
Target Start/End: Original strand, 3558800 - 3558887
Alignment:
Q  371 taaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatact 457  Q
    |||||||||||||||||||||| || |||||||||| ||| | ||||| | || |||| |||||| |||||||| |||||||||||||    
T  3558800 taaagttattgatagttgattaatgggtcccatttatgaaatttgtgtgacatgctggattggagggattgagttcttattagatact 3558887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 495
Target Start/End: Complemental strand, 42551145 - 42551051
Alignment:
Q  402 atttaagaactgtgtgtaagat-ctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtg 495  Q
    ||||||||| | ||||| |||| || |||| ||| |||||| |||||||||  ||||| |||||||| ||||||||||| |||||||||||||||    
T  42551145 atttaagaaatttgtgtgagatgctaggtttgagggattgattgcttattatgtactattattaaaaaattataaatgaatgatgtgtacacgtg 42551051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 439 - 507
Target Start/End: Complemental strand, 8572018 - 8571950
Alignment:
Q  439 tgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaa 507  Q
    ||||||||| |||||||||  |||||||| ||||||||| | | |||||||||||||||||| ||||||    
T  8572018 tgagtgcttgttagatactcgtattaaaaaattataaataattcatgtgtacacgtgagacccatttaa 8571950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 427 - 498
Target Start/End: Complemental strand, 2970413 - 2970342
Alignment:
Q  427 ggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgaga 498  Q
    ||||| || |||||| ||| |||||  |||||||||||||| ||||||||||||||||||||| | ||||||    
T  2970413 ggttgcagagattgaatgcatattatgtactactattaaaaaattataaatgagtgatgtgtatatgtgaga 2970342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 429 - 500
Target Start/End: Complemental strand, 4747107 - 4747036
Alignment:
Q  429 ttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacc 500  Q
    ||||||||||||||||||||||||||| |  |||||||| ||||||||||| | |||| || | ||||||||    
T  4747107 ttggagtgattgagtgcttattagataatgttattaaaaaattataaatgaattatgtatatatgtgagacc 4747036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 424 - 497
Target Start/End: Original strand, 11200476 - 11200549
Alignment:
Q  424 ctgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgag 497  Q
    |||||||||||  ||| | | |||||||| || || |||||||| |||||||||||||||||||||| ||||||    
T  11200476 ctgggttggagaaatttaatacttattaggtattattattaaaaaattataaatgagtgatgtgtacgcgtgag 11200549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 15468250 - 15468082
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagat-ctgggttggagtga 437  Q
    ||||||||||||||||||||| |  | || |||||| |||||||||  |||||||||  ||||||||||||| | ||||| |||| ||| ||||||   |    
T  15468250 ttttaatattaaaaaattgaaatttaatgatataaaattattgataaatgattagtggatcccatttaagaaatttgtgtgagatgctgcgttggaaaaa 15468151  T
Q  438 ttgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaa 507  Q
       ||| ||||||||||| |||| |||||| ||||| ||||||| ||| ||||| ||| |||| ||||||    
T  15468150 cgaagtacttattagatattactgttaaaa-attatcaatgagtaatgcgtacaagtgtgacccatttaa 15468082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 369 - 491
Target Start/End: Complemental strand, 35463326 - 35463202
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctggg--ttggagtgattgagtgcttattagatactactattaaa 466  Q
    |||||| ||||||||||||||||  ||| |  |||||||||| | ||||| |||| | ||  ||| |  |||||||| |||||||| |||||||||||||    
T  35463326 tataaaattattgatagttgatttatgaatttcatttaagaaatttgtgtgagatgttgggtttgaaaggattgagtacttattaggtactactattaaa 35463227  T
Q  467 atattataaatgagtgatgtgtaca 491  Q
    | |||||||| |||| |||| ||||    
T  35463226 aaattataaacgagtcatgtataca 35463202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 523
Target Start/End: Original strand, 8228852 - 8228947
Alignment:
Q  428 gttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaatagat 523  Q
    ||||||| ||||||||  ||||||||||||| | |||||| ||||||||||| || | |||||| ||||||    |||||| ||| ||||||||||    
T  8228852 gttggagggattgagtatttattagatactattgttaaaaaattataaatgattggtttgtacatgtgagattcgtttaagtaccaaaaaatagat 8228947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 10100397 - 10100440
Alignment:
Q  446 ttattagatactactattaaaatattataaatgagtgatgtgta 489  Q
    |||||| |||||| ||||||||| ||||||||||||||||||||    
T  10100397 ttattaaatactattattaaaattttataaatgagtgatgtgta 10100440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 369 - 520
Target Start/End: Complemental strand, 31900 - 31749
Alignment:
Q  369 tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaaat 468  Q
    ||||||||||||| |||||||||| | ||||| ||||||||||| ||||| | |||||||||||||| ||||| |||||||| |||||||||||||| |     
T  31900 tataaagttattgttagttgattacttagtcctatttaagaactttgtgtgaaatctgggttggagtaattgaatgcttatttgatactactattaagaa 31801  T
Q  469 attataaatgagtgatgtgtacacgtgagacctatttaagaacctaaaaata 520  Q
    ||||||||||||||||||| | || ||||||| |||||| || |||||||||    
T  31800 attataaatgagtgatgtgaatacatgagacccatttaaaaatctaaaaata 31749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 386 - 521
Target Start/End: Original strand, 63593 - 63729
Alignment:
Q  386 ttgattagtgagtcccatttaagaactgtgtgtaagatc-tgggttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgat 484  Q
    ||||||||||||||| ||||||||| | ||||| ||||  |||||| ||| |||||||| |||||||| |||||||||||||| ||||||||| |||||     
T  63593 ttgattagtgagtccaatttaagaaatatgtgtgagatgatgggttagagagattgagtccttattaggtactactattaaaaaattataaattagtgac 63692  T
Q  485 gtgtacacgtgagacctatttaagaacctaaaaatag 521  Q
     ||||||||||||||||||||||| ||| ||||||||    
T  63693 atgtacacgtgagacctatttaagtaccaaaaaatag 63729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 307 - 466
Target Start/End: Complemental strand, 2232 - 2073
Alignment:
Q  307 taagacccccaactttaagcgggccccgcacgtttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccattt 405  Q
    ||||||||||||||||||| |||  ||||||  ||||||||||||||| ||||| | ||||| |||||||||||| ||||||||||||||| ||| ||||    
T  2232 taagacccccaactttaagtggggtccgcacacttttaatattaaaaa-ttgaaattcagtgatataaagttattaatagttgattagtgaatcctattt 2134  T
Q  406 aagaactgtgtgtaagatctgggttggagtgattgagtgcttattagatactactattaaa 466  Q
    ||||||| ||||| ||||||  |||  || |||||| | |||||||| || ||||||||||    
T  2133 aagaactttgtgtgagatctaagtttaagggattgaatacttattagctattactattaaa 2073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 340 - 489
Target Start/End: Complemental strand, 55902 - 55755
Alignment:
Q  340 ttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaactgtgtgtaagatct-gggttggagtga 437  Q
    ||||||||||||||||||||  ||   || |||| |||||||||||||| |||| || ||   ||||||||| | ||| | |||| | |||||| || ||    
T  55902 ttttaatattaaaaaattgatatgtgatggtatatagttattgatagtttattaatgtgt---atttaagaaatttgtatgagatgttgggttgaagaga 55806  T
Q  438 ttgagtgcttattagatactactattaaaatattataaatgagtgatgtgta 489  Q
     |||||| ||||||| ||||| |||||||| |||||||||||||||||||||    
T  55805 ctgagtg-ttattagctactaatattaaaaaattataaatgagtgatgtgta 55755  T

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Target: scaffold0991 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 410
Target Start/End: Complemental strand, 3012 - 2940
Alignment:
Q  339 tttttaatattaaaaaattgaagtgcagtg-tataaagttattgatagttgattagtgagtcccatttaagaa 410  Q
    ||||| |||||||||||||||| |  | || |||||| ||||||||||| |||||||| |||| |||||||||    
T  3012 ttttttatattaaaaaattgaaatataatgatataaaattattgatagtggattagtgtgtcctatttaagaa 2940  T

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Target: scaffold0568 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0568
Description:

Target: scaffold0568; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 429 - 489
Target Start/End: Complemental strand, 756 - 696
Alignment:
Q  429 ttggagtgattgagtgcttattagatactactattaaaatattataaatgagtgatgtgta 489  Q
    ||||||| ||||||| |||| ||| ||||  ||||||||||||||||||  ||||||||||    
T  756 ttggagtcattgagtccttaatagctacttttattaaaatattataaatacgtgatgtgta 696  T

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