View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2513_low_34 (Length: 207)
Name: NF2513_low_34
Description: NF2513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2513_low_34 |
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Alignment Details
Target: chr3 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 19 - 192
Target Start/End: Complemental strand, 41032465 - 41032292
Alignment:
| Q |
19 |
cagtcaacagattttggatattgggaagggatggactcataagaagcagaaaactttggagtaaggttgaaatcaagtgctatggcgttccagcgacttg |
118 |
Q |
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| T |
41032465 |
cagtcaacagattttggatattgggaagggatggactcataagaagcagaaaactttggagtaaggttgaaatcaagtgctatggcgttccagcggcttg |
41032366 |
T |
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| Q |
119 |
atgaagggagaagtcgacctgcttctgaaactgtatgcatatatcttacaggattcttctctgactctaatttt |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41032365 |
atgaagggagaagtcgacctgcttctgaaactgtatgcatatatcttacaggattcttctctgactctaatttt |
41032292 |
T |
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