View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2513_low_9 (Length: 371)
Name: NF2513_low_9
Description: NF2513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2513_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 1 - 355
Target Start/End: Original strand, 37278139 - 37278495
Alignment:
| Q |
1 |
ttgatatattacacaaccaacaagtaataaaaattcatagtgcttgcttcttacactatctttaatatattagtagattgtccgtataggattcatgtat |
100 |
Q |
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| T |
37278139 |
ttgatatgttacacaacccacaagtaataaaaattcatagtgcttgcttcttacactatctttaatatattagtggattgtccgtataggattcatgtat |
37278238 |
T |
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| Q |
101 |
agtgactctaattnnnnnnngaattaatagaacataactagaacaaatgtaaaattccaaaagccagggacaaccattcaacatacaattcaggtttaac |
200 |
Q |
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| T |
37278239 |
agtgactctaattaaaaaaagaattaatagaacataactagaacaaatgtaaaattccaaaagccagggacaactattcaacatacaattcaggtttaac |
37278338 |
T |
|
| Q |
201 |
agctttaagttgtttactataaaattaataatattctaagaccttc--attaggtatagaaaatcccagttgttttggtttgttctgtatgttcgctctg |
298 |
Q |
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| T |
37278339 |
agctttaagttgtttactataaaattaataatattctaagaccttcatattaggtatagaaaatcccagttgtttttgtttgttctgtatgttcgctttg |
37278438 |
T |
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| Q |
299 |
gagttgcattattcagacccacatacctgacctgaccctccttttctcaaaacaact |
355 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
37278439 |
gagttgcattattcagacccacatacctgacctgaccctctttttctcaaaacaact |
37278495 |
T |
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