View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2514_high_7 (Length: 251)
Name: NF2514_high_7
Description: NF2514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2514_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 62 - 237
Target Start/End: Complemental strand, 16971976 - 16971801
Alignment:
| Q |
62 |
ttattaggagacatcatttcttcaaacctcaaagaggtcttagatatagatatcctttttctcattacttattctttgtgcggaggctttctctaatcta |
161 |
Q |
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| T |
16971976 |
ttattaggagacatcatttcttcaaacctcaaagaggtcttagatagagatatcccatttctcattacttatgctttgtgcggaggctttctctaatcta |
16971877 |
T |
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| Q |
162 |
taannnnnnnaaggagtttctctgatctattaatcctgagcctagctaataaaaaatccagtaataatattaatat |
237 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
16971876 |
taatttttttaaggagtttctctgatctattaatcctgagcctagctaaaaaaaaatccagtaataatattaatat |
16971801 |
T |
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