View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2514_low_11 (Length: 255)

Name: NF2514_low_11
Description: NF2514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2514_low_11
NF2514_low_11
[»] chr7 (49 HSPs)
chr7 (1-110)||(33884265-33884374)
chr7 (1-110)||(40851223-40851329)
chr7 (5-110)||(4923156-4923267)
chr7 (1-110)||(44544349-44544464)
chr7 (1-110)||(45723577-45723692)
chr7 (1-110)||(47271921-47272036)
chr7 (1-110)||(37354349-37354461)
chr7 (1-110)||(1469579-1469694)
chr7 (1-110)||(30876199-30876314)
chr7 (1-110)||(31684220-31684335)
chr7 (1-110)||(37394084-37394199)
chr7 (5-110)||(47219085-47219196)
chr7 (1-110)||(47281210-47281327)
chr7 (3-110)||(11050349-11050462)
chr7 (9-110)||(18353084-18353191)
chr7 (1-110)||(23842245-23842360)
chr7 (1-110)||(27364425-27364540)
chr7 (1-110)||(30798454-30798569)
chr7 (1-110)||(47294377-47294492)
chr7 (1-110)||(48628745-48628860)
chr7 (1-109)||(8162798-8162912)
chr7 (1-110)||(35600208-35600323)
chr7 (5-109)||(42979428-42979538)
chr7 (3-110)||(43968347-43968460)
chr7 (1-110)||(29248282-29248397)
chr7 (1-110)||(30972027-30972142)
chr7 (4-109)||(39034003-39034114)
chr7 (1-110)||(41139498-41139613)
chr7 (1-110)||(47119931-47120046)
chr7 (1-110)||(38427649-38427763)
chr7 (1-110)||(11476642-11476757)
chr7 (1-110)||(40520858-40520973)
chr7 (1-110)||(44800496-44800611)
chr7 (1-110)||(47579173-47579288)
chr7 (13-110)||(43025052-43025155)
chr7 (5-110)||(43752866-43752977)
chr7 (1-110)||(7336000-7336115)
chr7 (1-70)||(3797609-3797678)
chr7 (1-70)||(41113363-41113432)
chr7 (3-66)||(27774098-27774161)
chr7 (7-110)||(29739721-29739829)
chr7 (31-110)||(42888815-42888900)
chr7 (27-110)||(45233570-45233659)
chr7 (1-43)||(2960726-2960768)
chr7 (12-70)||(29739656-29739713)
chr7 (5-44)||(12583313-12583352)
chr7 (68-110)||(221236-221278)
chr7 (76-109)||(41107311-41107344)
chr7 (1-33)||(221298-221330)
[»] chr8 (39 HSPs)
chr8 (1-110)||(38633796-38633905)
chr8 (1-110)||(37933582-37933697)
chr8 (1-110)||(2533212-2533327)
chr8 (1-110)||(1293426-1293541)
chr8 (5-110)||(4649090-4649201)
chr8 (1-110)||(22684074-22684189)
chr8 (1-110)||(24430657-24430772)
chr8 (1-110)||(28707532-28707647)
chr8 (1-109)||(42988312-42988426)
chr8 (3-109)||(28496442-28496554)
chr8 (1-110)||(440780-440895)
chr8 (1-102)||(3875856-3875963)
chr8 (1-110)||(7434826-7434941)
chr8 (1-110)||(12010489-12010604)
chr8 (1-110)||(23935173-23935288)
chr8 (1-110)||(33651781-33651896)
chr8 (1-110)||(40301979-40302094)
chr8 (1-110)||(43806619-43806734)
chr8 (1-110)||(513248-513362)
chr8 (5-110)||(6016145-6016256)
chr8 (5-110)||(9056428-9056539)
chr8 (1-110)||(35443251-35443366)
chr8 (1-110)||(35884516-35884631)
chr8 (1-110)||(38107039-38107154)
chr8 (5-107)||(24193382-24193481)
chr8 (1-110)||(259918-260032)
chr8 (1-110)||(655889-656003)
chr8 (1-110)||(841624-841738)
chr8 (1-110)||(29485227-29485341)
chr8 (1-70)||(36400156-36400225)
chr8 (1-110)||(38208692-38208808)
chr8 (5-110)||(13797029-13797140)
chr8 (1-110)||(39513425-39513540)
chr8 (2-110)||(23972382-23972498)
chr8 (1-110)||(8137113-8137229)
chr8 (2-70)||(36218867-36218935)
chr8 (1-110)||(41536613-41536728)
chr8 (1-51)||(15847117-15847167)
chr8 (71-110)||(15847079-15847118)
[»] chr3 (54 HSPs)
chr3 (1-110)||(35346557-35346666)
chr3 (1-110)||(1687591-1687706)
chr3 (1-110)||(1016984-1017099)
chr3 (1-110)||(1448818-1448933)
chr3 (1-110)||(20813527-20813642)
chr3 (1-110)||(36315058-36315173)
chr3 (1-110)||(50287506-50287621)
chr3 (1-110)||(10618566-10618681)
chr3 (1-110)||(19268461-19268576)
chr3 (1-110)||(21564436-21564551)
chr3 (1-110)||(21890110-21890225)
chr3 (1-110)||(22851936-22852051)
chr3 (1-110)||(42107185-42107300)
chr3 (1-110)||(44152640-44152755)
chr3 (1-110)||(12748331-12748446)
chr3 (5-110)||(19664481-19664592)
chr3 (1-110)||(20086400-20086515)
chr3 (1-110)||(32650906-32651021)
chr3 (1-110)||(38446416-38446531)
chr3 (1-110)||(51475332-51475449)
chr3 (1-109)||(53195955-53196069)
chr3 (1-110)||(21656458-21656573)
chr3 (1-110)||(28699625-28699740)
chr3 (1-110)||(42016813-42016928)
chr3 (1-110)||(47329261-47329376)
chr3 (1-110)||(48651188-48651303)
chr3 (1-110)||(51562102-51562217)
chr3 (1-70)||(33151682-33151751)
chr3 (5-110)||(20760161-20760272)
chr3 (1-110)||(26455522-26455637)
chr3 (1-110)||(27070825-27070940)
chr3 (1-110)||(33473325-33473440)
chr3 (1-110)||(37247896-37248011)
chr3 (5-110)||(45380350-45380461)
chr3 (3-110)||(31122602-31122715)
chr3 (4-110)||(50977804-50977916)
chr3 (4-110)||(51080936-51081048)
chr3 (1-70)||(53926065-53926134)
chr3 (1-102)||(29677424-29677531)
chr3 (1-110)||(35608217-35608332)
chr3 (1-110)||(41250826-41250941)
chr3 (5-110)||(47473170-47473281)
chr3 (1-110)||(50364973-50365088)
chr3 (1-70)||(3697132-3697201)
chr3 (1-70)||(52821135-52821204)
chr3 (5-110)||(20913844-20913955)
chr3 (5-110)||(20921962-20922073)
chr3 (1-110)||(44798208-44798322)
chr3 (1-110)||(55164201-55164316)
chr3 (1-70)||(39069712-39069781)
chr3 (5-107)||(40922255-40922363)
chr3 (1-101)||(34019409-34019515)
chr3 (5-69)||(38924088-38924152)
chr3 (71-110)||(42641314-42641353)
[»] chr6 (27 HSPs)
chr6 (1-110)||(6503658-6503773)
chr6 (1-110)||(26393095-26393210)
chr6 (1-110)||(3408129-3408244)
chr6 (1-110)||(16193250-16193365)
chr6 (1-110)||(1915429-1915544)
chr6 (1-110)||(12626576-12626691)
chr6 (1-110)||(26231018-26231133)
chr6 (1-110)||(30378957-30379072)
chr6 (6-110)||(26196412-26196522)
chr6 (1-110)||(2707399-2707514)
chr6 (1-109)||(35223985-35224099)
chr6 (1-110)||(17942978-17943091)
chr6 (1-110)||(2390205-2390320)
chr6 (5-110)||(3258897-3259008)
chr6 (1-110)||(9382457-9382574)
chr6 (5-110)||(17428362-17428473)
chr6 (1-109)||(11133814-11133928)
chr6 (1-110)||(8178335-8178450)
chr6 (1-110)||(10256177-10256292)
chr6 (1-110)||(26936547-26936662)
chr6 (1-110)||(29050212-29050327)
chr6 (1-110)||(1077174-1077292)
chr6 (1-110)||(6785184-6785299)
chr6 (1-110)||(10931233-10931352)
chr6 (1-98)||(2598185-2598290)
chr6 (40-110)||(17515047-17515123)
chr6 (1-110)||(25820635-25820750)
[»] chr5 (44 HSPs)
chr5 (1-110)||(14717545-14717660)
chr5 (1-109)||(6740041-6740155)
chr5 (1-110)||(8215840-8215955)
chr5 (1-110)||(14952264-14952379)
chr5 (1-110)||(16096045-16096160)
chr5 (1-110)||(20408473-20408588)
chr5 (1-110)||(39824496-39824611)
chr5 (1-110)||(40074890-40075005)
chr5 (2-110)||(30297836-30297950)
chr5 (5-110)||(27116189-27116294)
chr5 (1-110)||(6331317-6331432)
chr5 (1-110)||(26593366-26593481)
chr5 (1-110)||(30863193-30863308)
chr5 (1-110)||(33760556-33760671)
chr5 (1-110)||(6600222-6600337)
chr5 (1-110)||(11000814-11000929)
chr5 (1-110)||(19398279-19398394)
chr5 (1-110)||(20079344-20079458)
chr5 (5-110)||(31710222-31710333)
chr5 (1-110)||(35342120-35342235)
chr5 (1-110)||(38964200-38964314)
chr5 (1-110)||(41282282-41282397)
chr5 (1-101)||(39002111-39002217)
chr5 (3-110)||(26035434-26035547)
chr5 (7-110)||(27509918-27510027)
chr5 (1-110)||(3352088-3352202)
chr5 (1-110)||(8689512-8689627)
chr5 (5-110)||(16752056-16752167)
chr5 (1-110)||(42993458-42993573)
chr5 (1-110)||(11692233-11692348)
chr5 (5-110)||(23129003-23129114)
chr5 (1-110)||(43166355-43166461)
chr5 (1-70)||(6251958-6252027)
chr5 (1-102)||(30208488-30208595)
chr5 (1-110)||(1052476-1052588)
chr5 (1-110)||(4015960-4016074)
chr5 (1-110)||(28078491-28078606)
chr5 (6-110)||(8694806-8694916)
chr5 (1-101)||(11935395-11935501)
chr5 (1-63)||(27457283-27457345)
chr5 (3-60)||(19659589-19659646)
chr5 (3-110)||(444894-445007)
chr5 (68-110)||(19661790-19661832)
chr5 (68-110)||(37923557-37923599)
[»] chr4 (53 HSPs)
chr4 (1-110)||(33807866-33807981)
chr4 (1-110)||(55517271-55517386)
chr4 (1-110)||(11795240-11795355)
chr4 (1-110)||(28160039-28160154)
chr4 (1-110)||(28264583-28264698)
chr4 (1-110)||(4545071-4545186)
chr4 (1-110)||(8882099-8882214)
chr4 (1-110)||(17993103-17993218)
chr4 (1-110)||(25734309-25734424)
chr4 (1-110)||(33174106-33174221)
chr4 (1-110)||(40988573-40988688)
chr4 (1-110)||(42273740-42273857)
chr4 (1-110)||(23135092-23135207)
chr4 (1-110)||(26017363-26017478)
chr4 (5-110)||(28812376-28812487)
chr4 (1-109)||(14564737-14564851)
chr4 (1-108)||(31973533-31973646)
chr4 (1-110)||(2055218-2055333)
chr4 (1-110)||(9339212-9339327)
chr4 (1-110)||(17847182-17847296)
chr4 (1-110)||(19168881-19168996)
chr4 (1-110)||(24458717-24458832)
chr4 (1-110)||(31591016-31591130)
chr4 (1-110)||(35929980-35930094)
chr4 (1-110)||(30467089-30467208)
chr4 (1-68)||(32317941-32318008)
chr4 (1-110)||(56555226-56555344)
chr4 (5-110)||(25730180-25730291)
chr4 (1-110)||(44490259-44490374)
chr4 (5-110)||(48707823-48707934)
chr4 (1-110)||(49118551-49118666)
chr4 (1-110)||(12196418-12196524)
chr4 (3-110)||(39995255-39995368)
chr4 (1-70)||(19496188-19496257)
chr4 (5-110)||(23553002-23553116)
chr4 (5-102)||(5227338-5227441)
chr4 (1-110)||(15984950-15985065)
chr4 (1-106)||(24623092-24623203)
chr4 (1-110)||(37381786-37381901)
chr4 (1-110)||(48149439-48149554)
chr4 (1-110)||(50542440-50542555)
chr4 (1-110)||(22298458-22298573)
chr4 (1-105)||(30141194-30141304)
chr4 (1-110)||(10588520-10588635)
chr4 (1-110)||(32118654-32118769)
chr4 (1-110)||(33693419-33693534)
chr4 (1-110)||(42549708-42549822)
chr4 (1-110)||(48551850-48551947)
chr4 (1-110)||(51371133-51371248)
chr4 (1-110)||(39699985-39700100)
chr4 (1-110)||(31208688-31208799)
chr4 (1-110)||(50276224-50276336)
chr4 (34-110)||(44490150-44490232)
[»] chr2 (42 HSPs)
chr2 (1-110)||(12759835-12759950)
chr2 (1-110)||(43249498-43249613)
chr2 (1-110)||(2455950-2456065)
chr2 (1-110)||(16246279-16246394)
chr2 (1-110)||(25087882-25087997)
chr2 (1-110)||(36210986-36211101)
chr2 (1-110)||(27328527-27328639)
chr2 (1-110)||(772061-772176)
chr2 (1-110)||(1106645-1106760)
chr2 (1-110)||(3430710-3430825)
chr2 (1-110)||(7378903-7379018)
chr2 (1-110)||(19180362-19180477)
chr2 (1-110)||(37732279-37732394)
chr2 (1-109)||(7297320-7297432)
chr2 (9-110)||(29737688-29737795)
chr2 (5-110)||(38750988-38751099)
chr2 (1-110)||(41500588-41500703)
chr2 (1-109)||(34253083-34253197)
chr2 (3-110)||(8396639-8396752)
chr2 (1-110)||(920962-921077)
chr2 (1-110)||(2056866-2056981)
chr2 (1-110)||(2094496-2094611)
chr2 (1-110)||(8899622-8899737)
chr2 (1-110)||(9276514-9276629)
chr2 (1-109)||(11949512-11949629)
chr2 (1-110)||(33865353-33865468)
chr2 (1-110)||(45124059-45124174)
chr2 (1-110)||(23672959-23673074)
chr2 (1-110)||(28650512-28650629)
chr2 (1-107)||(33107055-33107167)
chr2 (1-70)||(37838283-37838352)
chr2 (1-110)||(17134169-17134284)
chr2 (5-110)||(37654048-37654159)
chr2 (5-110)||(40854549-40854660)
chr2 (1-110)||(41178105-41178220)
chr2 (1-110)||(2315061-2315176)
chr2 (1-110)||(36444314-36444429)
chr2 (1-70)||(42629948-42630017)
chr2 (5-110)||(17484640-17484751)
chr2 (1-110)||(19916073-19916187)
chr2 (1-52)||(9331760-9331811)
chr2 (68-110)||(37838219-37838261)
[»] chr1 (63 HSPs)
chr1 (1-110)||(8141572-8141687)
chr1 (1-110)||(9878870-9878985)
chr1 (1-110)||(28425449-28425564)
chr1 (1-110)||(46825471-46825586)
chr1 (1-110)||(23767500-23767615)
chr1 (1-110)||(26069832-26069947)
chr1 (1-110)||(36157763-36157878)
chr1 (5-110)||(45670576-45670687)
chr1 (1-110)||(49094797-49094912)
chr1 (1-110)||(9962700-9962806)
chr1 (1-104)||(12143018-12143127)
chr1 (1-110)||(19315580-19315695)
chr1 (1-110)||(33673957-33674072)
chr1 (1-110)||(38473712-38473827)
chr1 (1-110)||(45350801-45350915)
chr1 (5-110)||(48669486-48669597)
chr1 (1-110)||(49814240-49814355)
chr1 (1-110)||(52350010-52350125)
chr1 (1-109)||(9974783-9974897)
chr1 (2-110)||(18782176-18782290)
chr1 (5-109)||(50099161-50099271)
chr1 (8-110)||(44979281-44979389)
chr1 (1-110)||(7553102-7553217)
chr1 (1-110)||(7608852-7608967)
chr1 (1-110)||(18892269-18892384)
chr1 (1-110)||(19274499-19274614)
chr1 (9-110)||(23228288-23228395)
chr1 (1-110)||(25988357-25988472)
chr1 (1-110)||(26549328-26549443)
chr1 (1-110)||(34971020-34971135)
chr1 (1-110)||(46051390-46051505)
chr1 (5-110)||(46095165-46095276)
chr1 (1-110)||(48802417-48802532)
chr1 (1-110)||(50689883-50689998)
chr1 (1-110)||(52146933-52147048)
chr1 (1-110)||(7651600-7651717)
chr1 (1-103)||(48319132-48319240)
chr1 (1-110)||(12964586-12964701)
chr1 (1-110)||(21965005-21965120)
chr1 (1-110)||(36781258-36781373)
chr1 (1-100)||(25800594-25800699)
chr1 (3-110)||(33325667-33325780)
chr1 (12-110)||(32373650-32373754)
chr1 (1-110)||(41982321-41982437)
chr1 (1-110)||(33194737-33194852)
chr1 (1-110)||(37216836-37216951)
chr1 (3-110)||(21929461-21929572)
chr1 (14-110)||(33714458-33714560)
chr1 (3-110)||(24204559-24204672)
chr1 (1-110)||(52067737-52067855)
chr1 (1-70)||(17983984-17984053)
chr1 (10-110)||(40721291-40721388)
chr1 (1-66)||(41106006-41106071)
chr1 (5-110)||(5400811-5400921)
chr1 (1-110)||(18917464-18917579)
chr1 (1-110)||(43396615-43396730)
chr1 (1-110)||(50533323-50533438)
chr1 (3-110)||(16705810-16705923)
chr1 (1-110)||(6711380-6711495)
chr1 (12-110)||(17989864-17989968)
chr1 (26-110)||(49973882-49973972)
chr1 (1-70)||(16506874-16506943)
chr1 (1-110)||(30281571-30281686)
[»] scaffold1986 (1 HSPs)
scaffold1986 (1-110)||(54-169)
[»] scaffold0693 (1 HSPs)
scaffold0693 (1-110)||(5113-5228)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-109)||(252524-252638)
[»] scaffold0392 (1 HSPs)
scaffold0392 (3-110)||(289-402)
[»] scaffold0096 (1 HSPs)
scaffold0096 (1-104)||(47908-48017)
[»] scaffold0004 (1 HSPs)
scaffold0004 (4-110)||(218825-218937)
[»] scaffold0542 (1 HSPs)
scaffold0542 (1-110)||(2059-2174)
[»] scaffold0184 (1 HSPs)
scaffold0184 (5-110)||(13035-13146)
[»] scaffold0078 (1 HSPs)
scaffold0078 (5-110)||(59698-59809)
[»] scaffold0727 (1 HSPs)
scaffold0727 (5-110)||(5123-5237)
[»] scaffold0130 (1 HSPs)
scaffold0130 (6-69)||(19768-19831)
[»] scaffold0122 (1 HSPs)
scaffold0122 (1-110)||(11305-11413)


Alignment Details
Target: chr7 (Bit Score: 106; Significance: 4e-53; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 33884374 - 33884265
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatcatcaccatcatcctccaaaaggacttgttt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33884374 acacccacttaaaattagccatctttttaggcatgacaaatggtggataatgttctttgttgctatcatcatcaccatcatcctccaaaaggacttgttt 33884275  T
Q  101 gaaacgattc 110  Q
    ||||||||||    
T  33884274 gaaacgattc 33884265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 40851329 - 40851223
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatcatcaccatcatcctccaaaaggacttgttt 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||   ||||||||||||||| ||||||||||||||    
T  40851329 acacccacttaaaattagtcatctttttaggcacgacaaatggtggataatgctctttgttgctatc---atcaccatcatcctctaaaaggacttgttt 40851233  T
Q  101 gaaacgattc 110  Q
    ||||||||||    
T  40851232 gaaacgattc 40851223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 4923267 - 4923156
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||      |||||||||||||||||| ||||||||||||    
T  4923267 ccacttaaaattagtcatctttttaggcatggcaaatggtggataatgttctttgttgctatcatttgaatcatcaccatcatcctctaaaaggacttgt 4923168  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  4923167 ttgaaacgattc 4923156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 44544464 - 44544349
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  44544464 acacccacttaaaattagtcatctttttaggcatgataaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 44544365  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  44544364 ttgtttgaaacgattc 44544349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 45723577 - 45723692
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc------atcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||      ||||||||||||||| |||| |||    
T  45723577 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctaaataatcaccatcatcctctaaaatgac 45723676  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  45723677 ttgtttgaaacgattc 45723692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 47272036 - 47271921
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  47272036 acacccacttaaaattagtcatctttttaggcatgacaaatgatggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 47271937  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  47271936 ttgtttgaaacgattc 47271921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 37354349 - 37354461
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc---atcaccatcatcctccaaaaggacttg 97  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||   |||| |||||||||| |||||||||||    
T  37354349 acacccacttaaaatcagtcatctttttaggcatggcaaatggtggataatgttgtttgttgctatcatctgaatcatcatcatcctctaaaaggacttg 37354448  T
Q  98 tttgaaacgattc 110  Q
    |||||||||||||    
T  37354449 tttgaaacgattc 37354461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1469579 - 1469694
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||| ||| |||| |||    
T  1469579 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatatgaatcatcaccatcattctctaaaatgac 1469678  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  1469679 ttgtttgaaacgattc 1469694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 30876314 - 30876199
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| |||| |||    
T  30876314 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaatgac 30876215  T
Q  95 ttgtttgaaacgattc 110  Q
    || |||||||||||||    
T  30876214 ttctttgaaacgattc 30876199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 31684220 - 31684335
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||      ||||||| |||||||||| ||||||||    
T  31684220 acacccacttaaaattagtcatctttttaggcatggcaaatggtggataatgctctttgttgctatcatctgaatcatcatcatcatcctctaaaaggac 31684319  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  31684320 ttgtttgaaacgattc 31684335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 37394084 - 37394199
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||| ||| || |||||    
T  37394084 acacccagttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatctgaatcatcaccatcatactctaagaggac 37394183  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  37394184 ttgtttgaaacgattc 37394199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 47219196 - 47219085
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||      |||||||||||||||||| ||||||||||||    
T  47219196 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttattgctatcatctaaatcatcaccatcatcctctaaaaggacttgt 47219097  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  47219096 ttgaaacgattc 47219085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 47281210 - 47281327
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccat--catcctccaaaagg 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||  ||||||| ||||||    
T  47281210 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcacatcctctaaaagg 47281309  T
Q  93 acttgtttgaaacgattc 110  Q
    ||||||||||||||||||    
T  47281310 acttgtttgaaacgattc 47281327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 11050349 - 11050462
Alignment:
Q  3 acccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggactt 96  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||      |||||||||| ||||||| ||||||||||    
T  11050349 acccacttaaaattagtcatctttttaggcatggtaaatggtggataatgttctttgttgctatcatctgaatcatcaccagcatcctctaaaaggactt 11050448  T
Q  97 gtttgaaacgattc 110  Q
    ||||||||||||||    
T  11050449 gtttgaaacgattc 11050462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 18353191 - 18353084
Alignment:
Q  9 ttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgtttga 102  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||      |||||||||||||||||| ||||||||||||||||    
T  18353191 ttaaaattagtcatctttttagacatgataaatggtggataatgttctttgttgctatcatctgaatcatcaccatcatcctctaaaaggacttgtttga 18353092  T
Q  103 aacgattc 110  Q
    ||||||||    
T  18353091 aacgattc 18353084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23842360 - 23842245
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||| |||||||||||||||||||||||| || ||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  23842360 acacccacttcaaattagtcatctttttaggcatggcagatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 23842261  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  23842260 ttgtttgaaacgattc 23842245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 27364425 - 27364540
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||      ||| ||| |||||||||| ||||||||    
T  27364425 acacccacttaaaattagtcatctttttaggtatgacaaatggtggataatgctctttgttgctatcatctgaatcgtcatcatcatcctctaaaaggac 27364524  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  27364525 ttgtttgaaacgattc 27364540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 30798454 - 30798569
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  30798454 acacccacttaaaattagtcatctttttaggcattgcaaatgatggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 30798553  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  30798554 ttgtttgaaacgattc 30798569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 47294377 - 47294492
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||      |||||||||||||||||| |||| |||    
T  47294377 acacccacttataattagtcatctttttaggcatgacaaatggtggataatgctctttattgctatcatcaaaatcatcaccatcatcctctaaaaagac 47294476  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  47294477 ttgtttgaaacgattc 47294492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 48628860 - 48628745
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||      |||||||| ||||||||| ||||||||    
T  48628860 acacccacttaaaattaatcatctttttaggcatgacaaatggtggataatgctctttgtttctatcatctaaatcatcactatcatcctctaaaaggac 48628761  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  48628760 ttgtttgaaacgattc 48628745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 8162798 - 8162912
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||      |||||||||||||||||| |||||||     
T  8162798 acacccacttaaaattagtcatctttttaggcatgacaaattgtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggat 8162897  T
Q  95 ttgtttgaaacgatt 109  Q
    |||||||||| ||||    
T  8162898 ttgtttgaaaagatt 8162912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 35600208 - 35600323
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc---atc---accatcatcctccaaaaggac 94  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||   |||   |||||||||||  ||||||||    
T  35600208 acacccacttaaaattagttatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatctttaccatcatcctttaaaaggac 35600307  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  35600308 ttgtttgaaacgattc 35600323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 42979428 - 42979538
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||      |||||||||||||||||| |||| |||||||    
T  42979428 ccacttaaaattagtcatctttttaggcatgacaaatagtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaatgacttgt 42979527  T
Q  99 ttgaaacgatt 109  Q
    |||||||||||    
T  42979528 ttgaaacgatt 42979538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 43968347 - 43968460
Alignment:
Q  3 acccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggactt 96  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||      ||||||| |||||||||| |||||||||     
T  43968347 acccacttaaaattagtcatctttataggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcatcatcatcctctaaaaggactc 43968446  T
Q  97 gtttgaaacgattc 110  Q
    ||||||||||||||    
T  43968447 gtttgaaacgattc 43968460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 29248397 - 29248282
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||  ||||||||||||||      |||||||||||||||||| |||| |||    
T  29248397 acacccacttaaaattagtcatctttttaggcatggcaaattgtggataattctctttgttgctatcatctgaatcatcaccatcatcctctaaaaagac 29248298  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  29248297 ttgtttgaaacgattc 29248282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 30972027 - 30972142
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| |||||      |||||||||||||||||| |||| |||    
T  30972027 acacccacttaaaattagtcatctttttaagcatgacaaattgtggataatgctctttgttactatcatctaaatcatcaccatcatcctctaaaatgac 30972126  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  30972127 ttgtttgaaacgattc 30972142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 39034114 - 39034003
Alignment:
Q  4 cccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc------atcaccatcatcctccaaaaggacttg 97  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||      ||||||||||||||  |||| ||||||    
T  39034114 cccacttaaaattaatcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctaaatgatcaccatcatcctttaaaatgacttg 39034015  T
Q  98 tttgaaacgatt 109  Q
    ||||||||||||    
T  39034014 tttgaaacgatt 39034003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41139498 - 41139613
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||      ||||||| |||||||||  ||||||||    
T  41139498 acacccgcttaaaattagtcatctttttaggcatgacaaatggtgaataatgctctttgttgctatcatctaaatcatcatcatcatcctataaaaggac 41139597  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  41139598 ttgtttgaaacgattc 41139613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 47120046 - 47119931
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||      |||||||||||||||||  ||||||||    
T  47120046 acacccacttaaaattagttatctttttaggcatgataaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctttaaaaggac 47119947  T
Q  95 ttgtttgaaacgattc 110  Q
    || |||||||||||||    
T  47119946 ttatttgaaacgattc 47119931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38427649 - 38427763
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc---atcac--catcatcctccaaaaggact 95  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||   |||||  ||||||| || |||||||||    
T  38427649 acacccacttaaaattagtcatctttttaggcatgacaaatggcggataatgctctttgttgctataatctaaatcacatcatcatcatctaaaaggact 38427748  T
Q  96 tgtttgaaacgattc 110  Q
    ||||||||| |||||    
T  38427749 tgtttgaaatgattc 38427763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 11476642 - 11476757
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||| |||||||||||| | |||||||| ||||| ||||||||||||||      |||||||||||||||||  ||||||||    
T  11476642 acacccacttaaaattagtcatttttttaggcatggcgaatggtgggtaatgctctttgttgctatcatctgaatcatcaccatcatcctttaaaaggac 11476741  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  11476742 ttgtttgaaacgattc 11476757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 40520973 - 40520858
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||||| ||||||||||||||      ||||||| |||||||||| ||||||||    
T  40520973 acacccacttaaaatcagtcatctttttagccatggcaaatggtggataatgctctttgttgctatcatctgaatcatcatcatcatcctctaaaaggac 40520874  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||| ||||    
T  40520873 ttgtttgaaacaattc 40520858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 44800496 - 44800611
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||      |||||||||||||||| | |||||||     
T  44800496 acacccacttaaaattagtcatctttttaggcatgatatatggtggataatgttccttgttgctatcatctgaatcatcaccatcatccactaaaaggat 44800595  T
Q  95 ttgtttgaaacgattc 110  Q
    | ||||||||||||||    
T  44800596 tagtttgaaacgattc 44800611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 47579173 - 47579288
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||      |||||||||||||||||| |||| |||    
T  47579173 acacccacttaaaattaaccatctttttaggaatgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaatgac 47579272  T
Q  95 ttgtttgaaacgattc 110  Q
     |||||||||||||||    
T  47579273 atgtttgaaacgattc 47579288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 43025155 - 43025052
Alignment:
Q  13 aattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgtttgaaacg 106  Q
    |||||||||||||||||||||||||||||| |||||| || ||||||||||||||      ||||| |||||||||||| ||||||||||||||||||||    
T  43025155 aattagtcatctttttaggcatgacaaatgatggatattgctctttgttgctatcatctgaatcataaccatcatcctctaaaaggacttgtttgaaacg 43025056  T
Q  107 attc 110  Q
    ||||    
T  43025055 attc 43025052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 43752866 - 43752977
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||| | ||||    
T  43752866 ccacttaaaattagtcatcttttgaggcaggacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaagaatttgt 43752965  T
Q  99 ttgaaacgattc 110  Q
    || |||||||||    
T  43752966 tttaaacgattc 43752977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 7336115 - 7336000
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||  | ||||||||||||      ||||||| ||| |||||  |||||||     
T  7336115 acacccacttaaaattagtcatctttttaggcatgacaaatggtgaataatactatttgttgctatcatctaaatcatcatcattatcctttaaaaggat 7336016  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  7336015 ttgtttgaaacgattc 7336000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3797609 - 3797678
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc 70  Q
    ||||||||||||||| |||||||||||||||||||  ||||||||||||||| |||||||||||||||||    
T  3797609 acacccacttaaaatcagtcatctttttaggcatgttaaatggtggataatgctctttgttgctatcatc 3797678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41113432 - 41113363
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc 70  Q
    |||||||||||||||||||||||||||||| |||| |||||| || |||||| |||||||||||||||||    
T  41113432 acacccacttaaaattagtcatctttttagacatggcaaatgatgaataatgctctttgttgctatcatc 41113363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 27774161 - 27774098
Alignment:
Q  3 acccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctat 66  Q
    ||||||||||||| || |||||||||||||||| |||||||||||||||| |||||||||||||    
T  27774161 acccacttaaaatcagccatctttttaggcatggcaaatggtggataatgctctttgttgctat 27774098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 29739829 - 29739721
Alignment:
Q  7 acttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgttt 100  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||| |||||||| |||||      |||||||  ||||||||| ||||||| ||||||    
T  29739829 acttaaaattagtcatctttt-aggcatggtaaatggtggataatgctctttgttactatcatctgaatcatcattatcatcctctaaaaggaattgttt 29739731  T
Q  101 gaaacgattc 110  Q
    ||||||||||    
T  29739730 gaaacgattc 29739721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 42888900 - 42888815
Alignment:
Q  31 gcatgacaaatggtggataatgttctttgttgctatcatc------atcaccatcatcctccaaaaggacttgtttgaaacgattc 110  Q
    ||||| |||||||||||||||| ||||||||||||| |||      ||||||||||||||| ||||||||||||||||||||||||    
T  42888900 gcatggcaaatggtggataatgctctttgttgctataatctaaatcatcaccatcatcctctaaaaggacttgtttgaaacgattc 42888815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 45233570 - 45233659
Alignment:
Q  27 ttaggcatgacaaatggtggataatgttctttgttgctatcat------catcaccatcatcctccaaaaggacttgtttgaaacgattc 110  Q
    ||||||||||||||| |||||||||| | |||||| |||||||      ||||||||| |||||| ||||||||||||||||||||||||    
T  45233570 ttaggcatgacaaatagtggataatgctatttgttactatcatttaaatcatcaccattatcctctaaaaggacttgtttgaaacgattc 45233659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2960726 - 2960768
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatgg 43  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  2960726 acacccacttaaaattagtcatctttttaggcatggcaaatgg 2960768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 29739713 - 29739656
Alignment:
Q  12 aaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc 70  Q
    |||||||||||||||| |||||||  ||||||||||||||| |||||||| ||||||||    
T  29739713 aaattagtcatctttt-aggcatggtaaatggtggataatgctctttgttactatcatc 29739656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 12583352 - 12583313
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggt 44  Q
    ||||||||||||||||||||||||| |||||| |||||||    
T  12583352 ccacttaaaattagtcatctttttacgcatgaaaaatggt 12583313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 221278 - 221236
Alignment:
Q  68 atcatcaccatcatcctccaaaaggacttgtttgaaacgattc 110  Q
    ||||||| |||||||||| |||| |||||||||||||||||||    
T  221278 atcatcaacatcatcctctaaaatgacttgtttgaaacgattc 221236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 41107344 - 41107311
Alignment:
Q  76 catcatcctccaaaaggacttgtttgaaacgatt 109  Q
    |||||||||| |||||||||||||||||||||||    
T  41107344 catcatcctctaaaaggacttgtttgaaacgatt 41107311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 221330 - 221298
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggca 33  Q
    |||||||||||||||||||| ||||||||||||    
T  221330 acacccacttaaaattagtcttctttttaggca 221298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 6e-46; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38633796 - 38633905
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatcatcaccatcatcctccaaaaggacttgttt 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||    
T  38633796 acacccacttaaaattagtcatctttttaggcatggcaaatggtggataatgctctttgttactatcatcatcaccatcatcctctaaaaggacttgttt 38633895  T
Q  101 gaaacgattc 110  Q
    ||||||||||    
T  38633896 gaaacgattc 38633905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 37933697 - 37933582
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||| ||||||||    
T  37933697 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 37933598  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  37933597 ttgtttgaaacgattc 37933582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 2533327 - 2533212
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  2533327 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 2533228  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  2533227 ttgtttgaaacgattc 2533212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 1293541 - 1293426
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  1293541 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 1293442  T
Q  95 ttgtttgaaacgattc 110  Q
    | ||||||||||||||    
T  1293441 tagtttgaaacgattc 1293426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 4649201 - 4649090
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||      |||||||||||||||||| ||||||||||||    
T  4649201 ccacttaaaattagtcatttttttaggcatggcaaatggtggataatgttctttgttgctatcatctgaatcatcaccatcatcctctaaaaggacttgt 4649102  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  4649101 ttgaaacgattc 4649090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 22684074 - 22684189
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  22684074 acacccacttaaaattagtcatctttttagccatgacaaatggtgaataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 22684173  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  22684174 ttgtttgaaacgattc 22684189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 24430657 - 24430772
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  24430657 acacccacttaaaattagtcatctttttaggcatgacaaaaggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 24430756  T
Q  95 ttgtttgaaacgattc 110  Q
    |||||||||| |||||    
T  24430757 ttgtttgaaatgattc 24430772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 28707532 - 28707647
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||  ||||||||    
T  28707532 acacccacttaaaattagtcatcttttaaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctgtaaaaggac 28707631  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  28707632 ttgtttgaaacgattc 28707647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 42988312 - 42988426
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||      |||||||||||||||||| ||||||||    
T  42988312 acacccacttaaaattagtcatctttttaggcatgacaaatggtagataatgctctttattgctatcatctaaatcatcaccatcatcctctaaaaggac 42988411  T
Q  95 ttgtttgaaacgatt 109  Q
    |||||||||||||||    
T  42988412 ttgtttgaaacgatt 42988426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 28496442 - 28496554
Alignment:
Q  3 acccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggactt 96  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||      |||||||||||||||||| ||||||||||    
T  28496442 acccacttaaaattagtcatctttttaggcatgacaaatgatggataatactctttgttgctatcatctgaatcatcaccatcatcctctaaaaggactt 28496541  T
Q  97 gtttgaaacgatt 109  Q
    |||||||||||||    
T  28496542 gtttgaaacgatt 28496554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 440895 - 440780
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||| |||||||||||| |||| |||| ||||||||||||||||||||||||||      |||||||||||||||||| ||||||||    
T  440895 acacccacttaaaattactcatctttttagacatggcaaacggtggataatgttctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 440796  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  440795 ttgtttgaaacgattc 440780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 3875963 - 3875856
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||      |||||||||||||||||| ||||||||    
T  3875963 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgcaatcatttaaatcatcaccatcatcctctaaaaggac 3875864  T
Q  95 ttgtttga 102  Q
    ||||||||    
T  3875863 ttgtttga 3875856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 7434941 - 7434826
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  7434941 acacccacttaaaattagtcatctttataggcttgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 7434842  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||| ||||||    
T  7434841 ttgtttgaagcgattc 7434826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12010604 - 12010489
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||      |||||| |||||||| |||||||||||    
T  12010604 acacccacttaaaattagtcatctttttatgcatggcaaatggtggataatgctctttgttgctatcatctgaatcatcgccatcatcttccaaaaggac 12010505  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  12010504 ttgtttgaaacgattc 12010489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23935288 - 23935173
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||| ||||      |||||||||||||||||| ||||||||    
T  23935288 acacccacttaaaatcagtcatctttttaggcatggcaaatggtggataatgctctttgttgttatcatcataatcatcaccatcatcctctaaaaggac 23935189  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  23935188 ttgtttgaaacgattc 23935173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 33651896 - 33651781
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  33651896 acacccacttaaaattagtcatctttttagacatgacaaacggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 33651797  T
Q  95 ttgtttgaaacgattc 110  Q
    |||||| |||||||||    
T  33651796 ttgtttaaaacgattc 33651781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 40301979 - 40302094
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||      ||||||| ||||||| || ||||||||    
T  40301979 acactcacttaaaattaatcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatctgaatcatcatcatcatcatctaaaaggac 40302078  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  40302079 ttgtttgaaacgattc 40302094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 43806619 - 43806734
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  43806619 acactcacttaaaattagtcatctttttaggcatggcaaatgatggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 43806718  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  43806719 ttgtttgaaacgattc 43806734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 513362 - 513248
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||      |||||||||||||||||| |||||||     
T  513362 acacccacttaaaattagtcat-tttttaggcgtgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggat 513264  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  513263 ttgtttgaaacgattc 513248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 6016256 - 6016145
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||      |||||||||||||||||| ||||| ||||||    
T  6016256 ccacttaaaatcagtcatctttttaggcatgacaaatggtggataatgctttttgttgctatcgtctgaatcatcaccatcatcctctaaaagaacttgt 6016157  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  6016156 ttgaaacgattc 6016145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 9056428 - 9056539
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||      |||||||||||||||||| |||| || ||||    
T  9056428 ccacttaaaattagtcatctttttaggcatgataaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaatgatttgt 9056527  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  9056528 ttgaaacgattc 9056539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 35443366 - 35443251
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||| ||||||||||||||| ||||| |||||||||| ||||||||||||||      |||||||||||||||||  ||||||||    
T  35443366 acacccacttaaaattagttatctttttaggcatggcaaatagtggataatgctctttgttgctatcatctgaatcatcaccatcatcctttaaaaggac 35443267  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  35443266 ttgtttgaaacgattc 35443251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 35884516 - 35884631
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||| | ||| ||||||||      |||||||||||||||||| ||||||||    
T  35884516 acacccacttaaaattagtcatctttttaggcatggcaaatggaggataatgctatttattgctatcatctgaatcatcaccatcatcctctaaaaggac 35884615  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  35884616 ttgtttgaaacgattc 35884631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 38107154 - 38107039
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||      || |||||||||||| || ||||| ||    
T  38107154 acacccacttaaaattaatcatctttttaggcatgataaatggtggataatgttctttgttgctatcatttaaattatcaccatcatcatctaaaagtac 38107055  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  38107054 ttgtttgaaacgattc 38107039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 24193382 - 24193481
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatcatcaccatcatcctccaaaaggacttgtttgaaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| | |  ||||||||| ||||||||||||||||||    
T  24193382 ccacttaaaattagtcatctttttaggcatgacaaatggtgaataatgctctttgttgctatcatc-tga--atcatcctctaaaaggacttgtttgaaa 24193478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 260032 - 259918
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||| ||||||||      |||||||||||||||||| ||||| ||    
T  260032 acacccacttaaaattagtcat-tttttaggcatgacagattgtggataatgttctttcttgctatcatctaaatcatcaccatcatcctctaaaagaac 259934  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  259933 ttgtttgaaacgattc 259918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 655889 - 656003
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||| ||||||||      |||||||||||||||||| ||||| ||    
T  655889 acacccacttaaaattagtcat-tttttaggcatgacagattgtggataatgttctttcttgctatcatctaaatcatcaccatcatcctctaaaagaac 655987  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  655988 ttgtttgaaacgattc 656003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 841624 - 841738
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||| ||||||||      |||||||||||||||||| ||||| ||    
T  841624 acacccacttaaaattagtcat-tttttaggcatgacagattgtggataatgttctttcttgctatcatctaaatcatcaccatcatcctctaaaagaac 841722  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  841723 ttgtttgaaacgattc 841738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 29485341 - 29485227
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||| |||||| |||||||||||| |||||| ||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  29485341 acacccacttaaaatcagtcat-tttttaggcatggcaaatgatggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 29485243  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  29485242 ttgtttgaaacgattc 29485227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 36400156 - 36400225
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc 70  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36400156 acacccacttaaacttagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatc 36400225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 38208808 - 38208692
Alignment:
Q  1 acacccacttaaaattagtcatct-ttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaagga 93  Q
    |||||||||||||||||||||||  |||||| |||| |||||||||||||||||| ||||||||||||      ||||||||||| |||||| |||||||    
T  38208808 acacccacttaaaattagtcatccattttagacatggcaaatggtggataatgttttttgttgctatcatctgaatcatcaccattatcctctaaaagga 38208709  T
Q  94 cttgtttgaaacgattc 110  Q
    |||||||||||||||||    
T  38208708 cttgtttgaaacgattc 38208692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 13797140 - 13797029
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    |||| |||||||||||||||||||||| |||||||||||||||  ||| ||||||||||||||      |||||||||||||||||  ||||||||||||    
T  13797140 ccacataaaattagtcatctttttaggtatgacaaatggtggacgatgctctttgttgctatcatctaaatcatcaccatcatcctttaaaaggacttgt 13797041  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  13797040 ttgaaacgattc 13797029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 39513425 - 39513540
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||  ||||||||||||||      ||||||| | |||||||| ||||||||    
T  39513425 acacccacttaaaattagtcatctttttaggcatggcatatggtggataatactctttgttgctatcatctgaatcatcatcgtcatcctctaaaaggac 39513524  T
Q  95 ttgtttgaaacgattc 110  Q
     |||||||||||||||    
T  39513525 ctgtttgaaacgattc 39513540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 23972382 - 23972498
Alignment:
Q  2 cacccacttaaaattagtcatctttttaggcatgac-aaatggtggataatgttctttgttgctatc------atcatcacc-atcatcctccaaaagga 93  Q
    ||||||||||||||||||||||||||||| |||||| ||||| ||||||||  ||||||||||||||      ||||||||| ||||||||| |||||||    
T  23972382 cacccacttaaaattagtcatctttttagacatgacaaaatgttggataatactctttgttgctatcatctgaatcatcaccaatcatcctctaaaagga 23972481  T
Q  94 cttgtttgaaacgattc 110  Q
    |||||||||||||||||    
T  23972482 cttgtttgaaacgattc 23972498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 8137229 - 8137113
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggat-aatgttctttgttgctatc------atcatcaccatcatcctccaaaagga 93  Q
    ||||| |||||||||||||||| |||||||||||  |||||||||||| |||||||||||||||||||      |||||||||||||||||  |||||||    
T  8137229 acacctacttaaaattagtcatttttttaggcatagcaaatggtggataaatgttctttgttgctatcatctgaatcatcaccatcatcctttaaaagga 8137130  T
Q  94 cttgtttgaaacgattc 110  Q
     |||||||||| |||||    
T  8137129 gttgtttgaaatgattc 8137113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 36218867 - 36218935
Alignment:
Q  2 cacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc 70  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  36218867 cacccacttaaaattagccatctttttaggcatggcaaatggtggataatggtctttgttgttatcatc 36218935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41536613 - 41536728
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| | |||  |||||||| |||||      |||||||||||||||||| |||| ||     
T  41536613 acacccacttaaaattagtcatctttttaggcatgacaaatagtgaaaaatactctttgttactatcatctaaatcatcaccatcatcctctaaaatgaa 41536712  T
Q  95 ttgtttgaaacgattc 110  Q
    |||||| |||||||||    
T  41536713 ttgtttcaaacgattc 41536728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15847167 - 15847117
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataat 51  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15847167 acacccacttaaaattagtcatctttttaggcatggcaaatggtggataat 15847117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 110
Target Start/End: Complemental strand, 15847118 - 15847079
Alignment:
Q  71 atcaccatcatcctccaaaaggacttgtttgaaacgattc 110  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  15847118 atcaccatcatcctctaaaaggacatgtttgaaacgattc 15847079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 6e-46; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 35346557 - 35346666
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatcatcaccatcatcctccaaaaggacttgttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||| |||||||||    
T  35346557 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgttatcatcatcaccatcatcctttaaaatgacttgttt 35346656  T
Q  101 gaaacgattc 110  Q
    ||||||||||    
T  35346657 gaaacgattc 35346666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 1687706 - 1687591
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  1687706 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgatctttgttgctatcatctatatcatcaccatcatcctctaaaaggac 1687607  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  1687606 ttgtttgaaacgattc 1687591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 1017099 - 1016984
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| |||||||     
T  1017099 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggat 1017000  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  1016999 ttgtttgaaacgattc 1016984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1448818 - 1448933
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  1448818 acacccacttaaaattagtcatctttttaggcatggcaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 1448917  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  1448918 ttgtttgaaacgattc 1448933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 20813527 - 20813642
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| |||| |||    
T  20813527 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaatgac 20813626  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  20813627 ttgtttgaaacgattc 20813642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 36315058 - 36315173
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||      |||||||||||||||||| ||||||||    
T  36315058 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttattgctatcatctgaatcatcaccatcatcctctaaaaggac 36315157  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  36315158 ttgtttgaaacgattc 36315173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 50287621 - 50287506
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||      |||||||||||||||||| ||||||||    
T  50287621 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgatctttattgctatcatctaaatcatcaccatcatcctctaaaaggac 50287522  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  50287521 ttgtttgaaacgattc 50287506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 10618566 - 10618681
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||| || ||| |||| |||    
T  10618566 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatctgaatcatcaccattattctctaaaaagac 10618665  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  10618666 ttgtttgaaacgattc 10618681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19268576 - 19268461
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatca------tcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||      ||||||||||||||| | ||||||||    
T  19268576 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgttatcatccgagtcatcaccatcatccactaaaaggac 19268477  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  19268476 ttgtttgaaacgattc 19268461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21564551 - 21564436
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||      |||||||||||||||||| ||||||||    
T  21564551 acacccacttaaaattagtcatctttttaggcatggcaaatggtggataatgctctttattgctatcatctaaatcatcaccatcatcctctaaaaggac 21564452  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  21564451 ttgtttgaaacgattc 21564436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21890225 - 21890110
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||      |||||||||||||||||| |||| |||    
T  21890225 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatattctttgttgctatcatttgaatcatcaccatcatcctctaaaaagac 21890126  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||| ||||    
T  21890125 ttgtttgaaacaattc 21890110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 22852051 - 22851936
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| |||| |||    
T  22852051 acacccacttaaaattagtcatctgtttaggcatgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaatgac 22851952  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  22851951 ttgtttgaaacgattc 22851936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 42107185 - 42107300
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  42107185 acacccacttaaaattagtcatctttttaggcatgtcaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 42107284  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||| ||||    
T  42107285 ttgtttgaaacaattc 42107300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 44152755 - 44152640
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| |||| |||    
T  44152755 acacccacttaaaattaatcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaatgac 44152656  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  44152655 ttgtttgaaacgattc 44152640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12748446 - 12748331
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||      ||||||||| |||||||| ||||||||    
T  12748446 acacccacttaaaattagtcatctttttaggcatggcaaatggtggataatgctctttgttactatcatctaaatcatcaccgtcatcctctaaaaggac 12748347  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  12748346 ttgtttgaaacgattc 12748331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 19664592 - 19664481
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||  |||| |||||||    
T  19664592 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctttaaaatgacttgt 19664493  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  19664492 ttgaaacgattc 19664481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 20086400 - 20086515
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||      |||||||||| ||||||| ||||||||    
T  20086400 acacccacttaaaattagtcatctttttaggcatggaaaatggtggataatgctctttgttgctatcatttgaatcatcaccaccatcctctaaaaggac 20086499  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  20086500 ttgtttgaaacgattc 20086515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 32650906 - 32651021
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||      |||||||||||||||||| ||||  ||    
T  32650906 acacccacttaaaattagtcatctttctaggcatggcaaatggtggataatgttctttgttgctatcatctgaatcatcaccatcatcctctaaaaaaac 32651005  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  32651006 ttgtttgaaacgattc 32651021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 38446531 - 38446416
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||      |||||||||||||||||| |||| |||    
T  38446531 acacccacttaaaattagtcatctttttaggcatgacaaatagtagataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaatgac 38446432  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  38446431 ttgtttgaaacgattc 38446416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 51475332 - 51475449
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgct--------atcatcatcaccatcatcctccaaaagg 92  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||        ||||||||||||||||||||| |||| |    
T  51475332 acacccacttaaaatcagtcatctttttaggcatgacaaatggtggataatggtctttgttgctatcatctgatcatcatcaccatcatcctctaaaaag 51475431  T
Q  93 acttgtttgaaacgattc 110  Q
    ||||||||||||||||||    
T  51475432 acttgtttgaaacgattc 51475449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 53196069 - 53195955
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||      |||||||||||||||||| |||| |||    
T  53196069 acacccacttaaaattagttatctttttaggcatggcaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaagac 53195970  T
Q  95 ttgtttgaaacgatt 109  Q
    |||||||||||||||    
T  53195969 ttgtttgaaacgatt 53195955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21656573 - 21656458
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||      |||||||||||||||||  ||||||||    
T  21656573 acacccacttaaaattagtcacctttttaggcatgataaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctttaaaaggac 21656474  T
Q  95 ttgtttgaaacgattc 110  Q
    |||||||| |||||||    
T  21656473 ttgtttgagacgattc 21656458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 28699740 - 28699625
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||      ||||||||||||||||||  ||||| |    
T  28699740 acacccacttaaaatcagtcatctttttaggcatggcaaatggtggataatgctctttgttgctatcatcttaatcatcaccatcatcctcttaaagggc 28699641  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  28699640 ttgtttgaaacgattc 28699625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 42016928 - 42016813
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||  | ||||||| ||||      |||||||||||||||||| ||||||||    
T  42016928 acacccacttaaaattagtcatctttttaggcatgacaaatgatggataatactttttgttgttatcatctgaatcatcaccatcatcctctaaaaggac 42016829  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  42016828 ttgtttgaaacgattc 42016813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 47329261 - 47329376
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||      ||||||| |||||||||  ||||||||    
T  47329261 acacccacttaaaattagtcatctttttaggtatggcaaatggtggataatgctctttgttgctatcatcttaatcatcatcatcatcctttaaaaggac 47329360  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  47329361 ttgtttgaaacgattc 47329376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 48651303 - 48651188
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||| || |||||||||||||| |||||||||||||||| ||||||||| ||||      |||||||||||||||||| ||||||||    
T  48651303 acacccacttaaaattaatcgtctttttaggcatggcaaatggtggataatgctctttgttgttatcatctgaatcatcaccatcatcctctaaaaggac 48651204  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  48651203 ttgtttgaaacgattc 48651188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 51562217 - 51562102
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc------atcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||      |||| |||||||||| |||| |||    
T  51562217 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctcttttttgctatcatctgaattatcatcatcatcctctaaaaagac 51562118  T
Q  95 ttgtttgaaacgattc 110  Q
     |||||||||||||||    
T  51562117 ctgtttgaaacgattc 51562102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 33151751 - 33151682
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33151751 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatc 33151682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 20760161 - 20760272
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||      ||||||||||| |||||| ||||||| ||||    
T  20760161 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatactctttgttgctatcatctaaatcatcaccattatcctctaaaaggatttgt 20760260  T
Q  99 ttgaaacgattc 110  Q
    || |||||||||    
T  20760261 tttaaacgattc 20760272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 26455637 - 26455522
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |      ||||||||||| |||||| |||| |||    
T  26455637 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataacgctctttgttgctaccatctgaatcatcaccattatcctctaaaatgac 26455538  T
Q  95 ttgtttgaaacgattc 110  Q
    | ||||||||||||||    
T  26455537 tagtttgaaacgattc 26455522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 27070825 - 27070940
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatca------tcatcaccatcatcctccaaaaggac 94  Q
    |||| |||||||||||||||||||||| || ||| | ||||||||||||||| |||||||||||||||      ||||||||||||||||| ||||||||    
T  27070825 acactcacttaaaattagtcatcttttcagacattataaatggtggataatgctctttgttgctatcatctaagtcatcaccatcatcctctaaaaggac 27070924  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  27070925 ttgtttgaaacgattc 27070940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 33473325 - 33473440
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||| ||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||      |||||||||||||||||  ||||||||    
T  33473325 acacgcacttaaaattagtcatctttttagtcatgataaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctttaaaaggac 33473424  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||| ||||    
T  33473425 ttgtttgaaacaattc 33473440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 37248011 - 37247896
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||| | |||||||||||| || |||||| ||||||||||||||      |||||||||||||||||  ||||||||    
T  37248011 acacccacttaaaattagtcatcttttcatgcatgacaaatgatgaataatgctctttgttgctatcatttgaatcatcaccatcatcctttaaaaggac 37247912  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  37247911 ttgtttgaaacgattc 37247896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 45380350 - 45380461
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    ||||||||||||||||||||||||| |||||  ||||||||||||||| ||||||||||||||      |||||||||||||||||| |||| |||||||    
T  45380350 ccacttaaaattagtcatctttttatgcatggtaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaatgacttgt 45380449  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  45380450 ttgaaacgattc 45380461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 31122715 - 31122602
Alignment:
Q  3 acccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggactt 96  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||      |||||||| ||||||||| |||| || ||    
T  31122715 acccgcttaaaattagtcatctttttaggcatggcaaatggtggataatgctctttgttgctatcatttgaatcatcactatcatcctctaaaatgattt 31122616  T
Q  97 gtttgaaacgattc 110  Q
    ||||||||||||||    
T  31122615 gtttgaaacgattc 31122602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 50977916 - 50977804
Alignment:
Q  4 cccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttg 97  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||||||      |||||||||||||||||  |||||||||||    
T  50977916 cccacttaaaatcagtcatgtttttaggcatgacaaatggtggataatgctttttgttgctatcatctgaatcatcaccatcatcctgtaaaaggacttg 50977817  T
Q  98 tttgaaacgattc 110  Q
    ||||||| |||||    
T  50977816 tttgaaatgattc 50977804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 51081048 - 51080936
Alignment:
Q  4 cccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttg 97  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||||||      |||||||||||||||||  |||||||||||    
T  51081048 cccacttaaaatcagtcatgtttttaggcatgacaaatggtggataatgctttttgttgctatcatctgaatcatcaccatcatcctgtaaaaggacttg 51080949  T
Q  98 tttgaaacgattc 110  Q
    ||||||| |||||    
T  51080948 tttgaaatgattc 51080936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 53926065 - 53926134
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc 70  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  53926065 acacccacttaaaattagtcatctttttaagcatgacaaatggtggataatgctctttgttgctatcatc 53926134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 29677531 - 29677424
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctat------catcatcaccatcatcctccaaaaggac 94  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||       |||||||||||||| ||| ||||||||    
T  29677531 acacccatttaaaattaatcatctttttaggcatgacaaatggtggataatgctctttgttgctataatctaaatcatcaccatcattctctaaaaggac 29677432  T
Q  95 ttgtttga 102  Q
    ||||||||    
T  29677431 ttgtttga 29677424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 35608217 - 35608332
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||      ||||||| ||| |||||  |||| |||    
T  35608217 acacccacttaaacttagtcatctttttaggcatgacaaatggtggataatactctttgttgctatcatctaaatcatcatcataatcctttaaaatgac 35608316  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  35608317 ttgtttgaaacgattc 35608332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 41250941 - 41250826
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||      ||||||| |||||||||  |||| |||    
T  41250941 acactcacttaaaattagtcatctttttaggcatggcaaatggtggataatgctctttgttgttatcatgtaaatcatcatcatcatccttgaaaatgac 41250842  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  41250841 ttgtttgaaacgattc 41250826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 47473281 - 47473170
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||      |||||| || | |||||| |||| |||||||    
T  47473281 ccacttaaaattagccatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatccccgttatcctctaaaatgacttgt 47473182  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  47473181 ttgaaacgattc 47473170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 50364973 - 50365088
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctat------catcatcaccatcatcctccaaaaggac 94  Q
    |||| |||||||||| ||| ||||||||||||||| |||||||||| ||||| |||||||||||||       |||||||||||||||||| ||||||||    
T  50364973 acactcacttaaaatcagtaatctttttaggcatggcaaatggtgggtaatgctctttgttgctataatctgaatcatcaccatcatcctctaaaaggac 50365072  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  50365073 ttgtttgaaacgattc 50365088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 3697201 - 3697132
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc 70  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||    
T  3697201 acacccacttaaaattagtcatctttttaggcatggcaaatggtggataatgctatttgttgctatcatc 3697132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 52821135 - 52821204
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc 70  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||    
T  52821135 acacccacttaaaattagtcatctttttaggcataacaaatgatggataatgctctttgttgctatcatc 52821204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 20913844 - 20913955
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    ||||||||||||||||||||||||||||||| | ||||||| |||||| | ||||||||||||      |||||||||||||||||  ||||||||||||    
T  20913844 ccacttaaaattagtcatctttttaggcatggcgaatggtgaataatgctatttgttgctatcatcttaatcatcaccatcatcctttaaaaggacttgt 20913943  T
Q  99 ttgaaacgattc 110  Q
    || |||||||||    
T  20913944 ttaaaacgattc 20913955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 20921962 - 20922073
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    ||||||||||||||||||||||||||||||| | ||||||| |||||| | ||||||||||||      |||||||||||||||||  ||||||||||||    
T  20921962 ccacttaaaattagtcatctttttaggcatggcgaatggtgaataatgctatttgttgctatcatcttaatcatcaccatcatcctttaaaaggacttgt 20922061  T
Q  99 ttgaaacgattc 110  Q
    || |||||||||    
T  20922062 ttaaaacgattc 20922073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 44798322 - 44798208
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||| |||| |||||||||||| |||||||||||||||| ||||||||||||||      ||||||||| | |||||| ||||||||    
T  44798322 acacccacttaaaattactcat-tttttaggcatgtcaaatggtggataatgctctttgttgctatcatatgaatcatcaccgttatcctctaaaaggac 44798224  T
Q  95 ttgtttgaaacgattc 110  Q
     |||||||||||||||    
T  44798223 gtgtttgaaacgattc 44798208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 55164201 - 55164316
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctat------catcatcaccatcatcctccaaaaggac 94  Q
    ||||| |||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||       |||||||||||||||||  |||| |||    
T  55164201 acacctacttaaaattagtcatctttttaggcatgataaatagtggataatgctctttgttgctattatctaaatcatcaccatcatcctttaaaatgac 55164300  T
Q  95 ttgtttgaaacgattc 110  Q
    | ||||||||||||||    
T  55164301 tcgtttgaaacgattc 55164316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 39069781 - 39069712
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc 70  Q
    ||||||||||||||||||||||||||| | ||||| |||||||||||||||| |||||||||||||||||    
T  39069781 acacccacttaaaattagtcatcttttcatgcatggcaaatggtggataatgctctttgttgctatcatc 39069712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 40922255 - 40922363
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    ||||||||||||||| || ||||||||||||  ||||||||||||||||||||||||||| ||      |||||||||||||||||  |||| |||||||    
T  40922255 ccacttaaaattagtaatttttttaggcatggaaaatggtggataatgttctttgttgctgtcatgtgaatcatcaccatcatcctttaaaatgacttgt 40922354  T
Q  99 ttgaaacga 107  Q
    |||||||||    
T  40922355 ttgaaacga 40922363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 34019515 - 34019409
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||| || ||| |||||||||||| |||||||||||||||| | ||||||||||||      ||||||| |||||||||| |||| |||    
T  34019515 acacccacttaaaatcagccatatttttaggcatgtcaaatggtggataatgctttttgttgctatcatctgaatcatcatcatcatcctctaaaatgac 34019416  T
Q  95 ttgtttg 101  Q
    |||||||    
T  34019415 ttgtttg 34019409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 38924088 - 38924152
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcat 69  Q
    ||||||||||||| |||||| |||| |||||||||||  || |||| | ||||||||||||||||    
T  38924088 ccacttaaaattaatcatctctttaagcatgacaaataatgaataacgctctttgttgctatcat 38924152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 110
Target Start/End: Original strand, 42641314 - 42641353
Alignment:
Q  71 atcaccatcatcctccaaaaggacttgtttgaaacgattc 110  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  42641314 atcaccatcatcatctaaaaggacttgtttgaaacgattc 42641353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 1e-40; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6503773 - 6503658
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  6503773 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatataaatcatcaccatcatcctctaaaaggac 6503674  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  6503673 ttgtttgaaacgattc 6503658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 26393095 - 26393210
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||| ||||||||    
T  26393095 acactcacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 26393194  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  26393195 ttgtttgaaacgattc 26393210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3408244 - 3408129
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| |||| |||    
T  3408244 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaagac 3408145  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  3408144 ttgtttgaaacgattc 3408129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 16193365 - 16193250
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||      |||||||||||||||||| ||||||||    
T  16193365 acacccacttaaaattagtcatctttttaggcatggcaaatggtggataatgttctttgttgttatcatctgaatcatcaccatcatcctctaaaaggac 16193266  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  16193265 ttgtttgaaacgattc 16193250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1915429 - 1915544
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||  ||||||||    
T  1915429 acacccacttaaaattaatcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctataaaaggac 1915528  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  1915529 ttgtttgaaacgattc 1915544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12626691 - 12626576
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||      ||||||| |||||||||| ||||||||    
T  12626691 acacccacttaaaattagtcatctttttaggcatggcaaatggtggataatgctctttgttgctatcatctgaatcatcatcatcatcctctaaaaggac 12626592  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  12626591 ttgtttgaaacgattc 12626576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 26231018 - 26231133
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| |||| |||    
T  26231018 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatcttaatcatcaccatcatcctctaaaatgac 26231117  T
Q  95 ttgtttgaaacgattc 110  Q
    |||||||||| |||||    
T  26231118 ttgtttgaaaggattc 26231133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 30379072 - 30378957
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||      ||||||| |||||||||| ||||||||    
T  30379072 acacccacttaaaattagtcatctttttaggcatggtaaatggtggataatgttctttgttgctatcatctgaatcatcatcatcatcctctaaaaggac 30378973  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  30378972 ttgtttgaaacgattc 30378957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 26196412 - 26196522
Alignment:
Q  6 cacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgtt 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||      |||||||||||||||||| |||||||||||||    
T  26196412 cacttaaaattaatcatctttttaggcatgacaaatggtggataatgttttttgttgctatcatctgaatcatcaccatcatcctctaaaaggacttgtt 26196511  T
Q  100 tgaaacgattc 110  Q
    |||||||||||    
T  26196512 tgaaacgattc 26196522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 2707514 - 2707399
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||      |||||||||||||||||| |||| |||    
T  2707514 acactcacttaaaattagtcatctttttaggcatggcaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaagac 2707415  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  2707414 ttgtttgaaacgattc 2707399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 35223985 - 35224099
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||| ||| |||||||||||||||||      |||||||||||||||||| ||||||||    
T  35223985 acacccacttaaaattagtcatctttttaggcatgtcaaattgtgtatattgttctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 35224084  T
Q  95 ttgtttgaaacgatt 109  Q
    |||||||||||||||    
T  35224085 ttgtttgaaacgatt 35224099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 17943091 - 17942978
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||      ||||||||||||||| || ||||||      
T  17943091 acacccacttaaaattagtcatctttttaggcatgacaaatagtggataatgttctttgttgctatcatctgaatcatcaccatcatcatctaaaagg-- 17942994  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  17942993 ttgtttgaaacgattc 17942978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 2390320 - 2390205
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||      |||||||| ||||||||| ||||||||    
T  2390320 acacccacttataattagtcatctttttaggcatgacaaatggtggataatgctatttgttgctatcatctaaatcatcacaatcatcctctaaaaggac 2390221  T
Q  95 ttgtttgaaacgattc 110  Q
    |||||||||| |||||    
T  2390220 ttgtttgaaatgattc 2390205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 3258897 - 3259008
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||      |||||||||||||| ||| ||||||||||||    
T  3258897 ccacttaaaattagtcatctttttatgcatgacaaatggtggataacgctctttgttgctatcatctgaatcatcaccatcattctctaaaaggacttgt 3258996  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  3258997 ttgaaacgattc 3259008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9382574 - 9382457
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc--------atcaccatcatcctccaaaagg 92  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||         |||||||||||||| ||||||    
T  9382574 acacccacttaaaattagtcatctttttaagcatgacaaatggtggataatgctctttgtttctatcatctgaatcaattcaccatcatcctctaaaagg 9382475  T
Q  93 acttgtttgaaacgattc 110  Q
    ||||||||||||||||||    
T  9382474 acttgtttgaaacgattc 9382457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 17428362 - 17428473
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||      ||||||||||||||| || |||| |||||||    
T  17428362 ccacttaaaattagtcatctttttaggcatgacaaacggtgaataatgttctttgttgctatcatctgaatcatcaccatcatcttctaaaatgacttgt 17428461  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  17428462 ttgaaacgattc 17428473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 11133928 - 11133814
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||| ||| ||||||| ||||||||| ||||||||||||||      |||||||||||||||||| |||| |||    
T  11133928 acacccacttaaaattagtcatctttttagacataacaaatgatggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaatgac 11133829  T
Q  95 ttgtttgaaacgatt 109  Q
    |||||||||||||||    
T  11133828 ttgtttgaaacgatt 11133814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 8178335 - 8178450
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||      ||||||||| |||||||  ||||| ||    
T  8178335 acacccacttaaaattagtcatctttttaagcatggcaaatggtggataatgctctttgttgctatcattcaaatcatcaccgtcatcctttaaaagcac 8178434  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  8178435 ttgtttgaaacgattc 8178450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 10256292 - 10256177
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||      ||||||||| |||||||| ||||| ||    
T  10256292 acacccacttaaaattagtcatctttttaggcattgcaaatggtggataatgctctttgttgctatcatctcaatcatcaccgtcatcctctaaaagaac 10256193  T
Q  95 ttgtttgaaacgattc 110  Q
    |||||| |||||||||    
T  10256192 ttgtttaaaacgattc 10256177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 26936662 - 26936547
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||      ||||||| |||||||||| |||| ||     
T  26936662 acacccacttaaaatcagtcatctttttaggcatgacaaatggtggataatactctttgttgctatcatctgaatcatcatcatcatcctctaaaaagat 26936563  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  26936562 ttgtttgaaacgattc 26936547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 29050327 - 29050212
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||| |||||||||||| | |||||||| ||||| ||||||||||||||      |||||||||||||||||  ||||||||    
T  29050327 acacccacttaaaattagtcatttttttaggcatggcgaatggtgggtaatgctctttgttgctatcatctgaatcatcaccatcatcctttaaaaggac 29050228  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  29050227 ttgtttgaaacgattc 29050212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 1077292 - 1077174
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggata---atgttctttgttgctatc------atcatcaccatcatcctccaaaag 91  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||   ||| ||||||||||||||      |||||||||||||||||| |||||    
T  1077292 acacccacttaaaattaatcatctttttaggcatggcaaatggtggataatgatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaag 1077193  T
Q  92 gacttgtttgaaacgattc 110  Q
    |||| ||||||||||||||    
T  1077192 gactagtttgaaacgattc 1077174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 6785184 - 6785299
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||| |||| |||||  || |||||| ||||||||||||||      ||||||| |||||||||| ||||||||    
T  6785184 acacccacttaaaattagtcatctttttagtcatgtcaaattttgtataatgctctttgttgctatcatctgaatcatcatcatcatcctctaaaaggac 6785283  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  6785284 ttgtttgaaacgattc 6785299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 10931233 - 10931352
Alignment:
Q  1 acacccacttaaaattagtcatctttttag----gcatgacaaatggtggataatgttctttgttgctat------catcatcaccatcatcctccaaaa 90  Q
    |||||| |||||||||||||||||||||||    |||||| ||||||||||||||||||||| |||||||       |||||||||||||||||| ||||    
T  10931233 acacccgcttaaaattagtcatctttttaggcatgcatgagaaatggtggataatgttctttattgctattatctgaatcatcaccatcatcctctaaaa 10931332  T
Q  91 ggacttgtttgaaacgattc 110  Q
    ||||||||||||||||||||    
T  10931333 ggacttgtttgaaacgattc 10931352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 2598185 - 2598290
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatg--gtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaagg 92  Q
    ||||||||||||||||| ||||||||||||||||| ||||||  |||||||||| | ||||||||||||      |||||||||||||||||| ||||||    
T  2598185 acacccacttaaaattactcatctttttaggcatggcaaatggtgtggataatgctttttgttgctatcatctaaatcatcaccatcatcctctaaaagg 2598284  T
Q  93 acttgt 98  Q
    ||||||    
T  2598285 acttgt 2598290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 17515123 - 17515047
Alignment:
Q  40 atggtggataatgttctttgttgctatcatc------atcaccatcatcctccaaaaggacttgtttgaaacgattc 110  Q
    ||||||||||||| |||||||||||||||||      ||||||||||||||| ||||||||||||||||||||||||    
T  17515123 atggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggacttgtttgaaacgattc 17515047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 25820635 - 25820750
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||| ||||||||||||||  |||||| |||| |||||  ||||||||||| |||||| |||||      |||||||||||||  ||| |||||||     
T  25820635 acacccatttaaaattagtcataattttagtcatgtcaaattatggataatgttatttgttactatcatctaaatcatcaccatcaatctctaaaaggag 25820734  T
Q  95 ttgtttgaaacgattc 110  Q
    |||||| |||||||||    
T  25820735 ttgtttcaaacgattc 25820750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 14717660 - 14717545
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||| |||| |||    
T  14717660 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatctgaatcatcaccatcatcctctaaaaagac 14717561  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  14717560 ttgtttgaaacgattc 14717545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 6740041 - 6740155
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  6740041 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 6740140  T
Q  95 ttgtttgaaacgatt 109  Q
    |||||||||||||||    
T  6740141 ttgtttgaaacgatt 6740155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 8215955 - 8215840
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  8215955 acacccacttaaaattagtcatctttttaggaatgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 8215856  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  8215855 ttgtttgaaacgattc 8215840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 14952379 - 14952264
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||      |||| ||||||||||||| ||||||||    
T  14952379 acacccacttaaaattagtcatctttttaggcatggcaaatggtggataatgttctttgttgctatcatctgaatcaacaccatcatcctctaaaaggac 14952280  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  14952279 ttgtttgaaacgattc 14952264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16096045 - 16096160
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  16096045 acacccacttaaaattagtcatctttttaggtatgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 16096144  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  16096145 ttgtttgaaacgattc 16096160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 20408588 - 20408473
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||      |||||||||||||||||| ||||||||    
T  20408588 acacccgcttaaaattagtcatctttttaggcatggcaaatggtggataatgttctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 20408489  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  20408488 ttgtttgaaacgattc 20408473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 39824611 - 39824496
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||| ||    
T  39824611 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaagtac 39824512  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  39824511 ttgtttgaaacgattc 39824496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 40075005 - 40074890
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||  ||||||||    
T  40075005 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctgtaaaaggac 40074906  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  40074905 ttgtttgaaacgattc 40074890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 30297836 - 30297950
Alignment:
Q  2 cacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggact 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||  |||||||||    
T  30297836 cacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctttaaaaggact 30297935  T
Q  96 tgtttgaaacgattc 110  Q
    |||||||||||||||    
T  30297936 tgtttgaaacgattc 30297950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 27116189 - 27116294
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatcatcaccatcatcctccaaaaggacttgtttgaaa 104  Q
    |||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| | | |||||||||| ||||||||||||||||||    
T  27116189 ccacttcaaattagtcatctttttaggcattacaaatcgtggataatgttctttgttgctatcatcttaatcatcatcctctaaaaggacttgtttgaaa 27116288  T
Q  105 cgattc 110  Q
    ||||||    
T  27116289 cgattc 27116294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6331432 - 6331317
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||      |||||||||||||||||| ||||||||    
T  6331432 acacccacttaaaattagtcatctttttaggcatgacaaatggtgaataatgctctttgttactatcatctaaatcatcaccatcatcctctaaaaggac 6331333  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  6331332 ttgtttgaaacgattc 6331317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 26593366 - 26593481
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcat------catcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||      ||||||||| |||||| ||||||||    
T  26593366 acacccacttaaaattaatcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctaaaccatcaccattatcctctaaaaggac 26593465  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  26593466 ttgtttgaaacgattc 26593481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 30863308 - 30863193
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      ||||||||||||| |||| ||||| ||    
T  30863308 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcagcctctaaaagaac 30863209  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  30863208 ttgtttgaaacgattc 30863193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 33760556 - 33760671
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| |||||||     
T  33760556 acacccacttaaaattagtcatctttttagtcatgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggaa 33760655  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  33760656 ttgtttgaaacgattc 33760671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 6600222 - 6600337
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc------atcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||      ||||||||||||||| || |||||    
T  6600222 acacccacttaaaattagtcatctttttaggcatggtaaatggtggataatgttctttgttgctatcatctgaattatcaccatcatcctctaagaggac 6600321  T
Q  95 ttgtttgaaacgattc 110  Q
    |||||||||| |||||    
T  6600322 ttgtttgaaatgattc 6600337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 11000814 - 11000929
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||| || ||| |||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  11000814 acacccacttaaaattagtcatctttttaggcctggcaagtggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 11000913  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  11000914 ttgtttgaaacgattc 11000929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19398279 - 19398394
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||      ||||||| |||||||||| ||||||||    
T  19398279 acacccacttaaaattagtcatctttttaggtatgacaaatggtggataatgttctttgttactatcatctgaatcatcatcatcatcctctaaaaggac 19398378  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||| ||||    
T  19398379 ttgtttgaaacaattc 19398394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 20079344 - 20079458
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc------atcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||      ||||||||||||||| |||||||     
T  20079344 acacccacttaaaattagtcatctttttaggcatgacaaattgtggataatgctctttgttgctatcatctgaattatcaccatcatcctctaaaagga- 20079442  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  20079443 ttgtttgaaacgattc 20079458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 31710333 - 31710222
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||| ||| ||||| ||||||    
T  31710333 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcattctctaaaagaacttgt 31710234  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  31710233 ttgaaacgattc 31710222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 35342235 - 35342120
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      ||||||||||||||| |  |||||||     
T  35342235 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcaactgaatcatcaccatcatcttttaaaaggat 35342136  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  35342135 ttgtttgaaacgattc 35342120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38964200 - 38964314
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| |||||||     
T  38964200 acacccacttaaaattagtcat-tttttaggcatgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggat 38964298  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  38964299 ttgtttgaaacgattc 38964314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 41282397 - 41282282
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||      ||||||||||| |||||| ||||||||    
T  41282397 acactcacttaaaattagtcatctttttaggcatgataaatggtggataatgctctttgttgctatcatctaaatcatcaccattatcctctaaaaggac 41282298  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  41282297 ttgtttgaaacgattc 41282282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 39002111 - 39002217
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||      |||||||||||||||||| ||||||||    
T  39002111 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctatttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 39002210  T
Q  95 ttgtttg 101  Q
    |||||||    
T  39002211 ttgtttg 39002217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 26035434 - 26035547
Alignment:
Q  3 acccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggactt 96  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||      |||||||| ||||||||| ||||||||||    
T  26035434 acccacttaaaatcagtcatctttttaggcacgacaaatggtggataatgctctttgttgctatcatctaaatcatcactatcatcctctaaaaggactt 26035533  T
Q  97 gtttgaaacgattc 110  Q
    ||||||||||||||    
T  26035534 gtttgaaacgattc 26035547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 27510027 - 27509918
Alignment:
Q  7 acttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| |||| ||| |||||    
T  27510027 acttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaatgacctgttt 27509928  T
Q  101 gaaacgattc 110  Q
    ||||||||||    
T  27509927 gaaacgattc 27509918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 3352088 - 3352202
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||      |||||||||||||| ||  ||||||||    
T  3352088 acacccacttaaaattagtcatctttttaggcatgacaaagggtggataatgctctttgttgctatcatctgaatcatcaccatcattct-taaaaggac 3352186  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  3352187 ttgtttgaaacgattc 3352202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 8689627 - 8689512
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||      |||||||||||||| ||| |||| |||    
T  8689627 acacccacttaaaattagtcatctttttaggcatggcaaatagtggataatgctctttgttgctatcatctgaatcatcaccatcattctctaaaaagac 8689528  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  8689527 ttgtttgaaacgattc 8689512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 16752167 - 16752056
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||      |||||||||||||||||| ||||||||||||    
T  16752167 ccacttaaaatcagtcatctttttaggcatgacaaatggtgaataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggacttgt 16752068  T
Q  99 ttgaaacgattc 110  Q
    ||||||| ||||    
T  16752067 ttgaaacaattc 16752056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 42993573 - 42993458
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||| |||||      |||||||||||||||||| ||||||||    
T  42993573 acacccacttaaaattagtcatctttttaggcatggtaaatggtggataatgctctttgttactatcatctgaatcatcaccatcatcctctaaaaggac 42993474  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||| ||||    
T  42993473 ttgtttgaaacaattc 42993458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 11692233 - 11692348
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |      |||| ||||||||||||  |||||||     
T  11692233 acacccacttaaaattagtcatctttttaggcatcacaaatggtggataatgctctttgttgctaacatttgaatcaccaccatcatcctttaaaaggat 11692332  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  11692333 ttgtttgaaacgattc 11692348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 23129003 - 23129114
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||      ||||||||||| |||||| |||| |||||||    
T  23129003 ccacttaaaattagtcatctttttaggcatgataaatggtggataatgctctttgctgctatcatctgaatcatcaccattatcctctaaaatgacttgt 23129102  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  23129103 ttgaaacgattc 23129114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 43166355 - 43166461
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatcatcaccatcatcctccaaaaggacttgttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||  | |  ||||||||| |||| |||||||||    
T  43166355 acacccacttaaaattagtcatctttttaggcatgacaaatgatggataatgctctttgtttctatcat--tta-aatcatcctctaaaaagacttgttt 43166451  T
Q  101 gaaacgattc 110  Q
    ||||||||||    
T  43166452 gaaacgattc 43166461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 6252027 - 6251958
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  6252027 acacccacttaaaattagtcatctttttaggcatgacaaatggtgaataatgctctttgttgctatcatc 6251958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 30208488 - 30208595
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||      |||||||||||||||||| |||| |||    
T  30208488 acacctacttaaaattaatcatctttttaggcatgataaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaagac 30208587  T
Q  95 ttgtttga 102  Q
    ||||||||    
T  30208588 ttgtttga 30208595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 1052588 - 1052476
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||| ||||||||||| ||||| ||||||||||   ||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  1052588 acacccacttaaaattactcatctttttaagcatggcaaatggtgg---atgctctttgttgctatcatctgtatcatcaccatcatcctctaaaaggac 1052492  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  1052491 ttgtttgaaacgattc 1052476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 4015960 - 4016074
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||||||||||| ||||| || |||||      |||||||||||||||||| |||| |||    
T  4015960 acacctacttaaaattagtcatatttttaggcatgataaatggtggataatgctcttt-ttactatcatctaaatcatcaccatcatcctctaaaatgac 4016058  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  4016059 ttgtttgaaacgattc 4016074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 28078491 - 28078606
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||| | ||  |||||||||||||||||| ||||||| ||||||||||||||      |||||||||||| ||||| |||| |||    
T  28078491 acacccacttaaaattagtaaactaattaggcatgacaaatggtagataatgctctttgttgctatcatctgaatcatcaccatcttcctctaaaaagac 28078590  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||| ||||    
T  28078591 ttgtttgaaacaattc 28078606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 8694916 - 8694806
Alignment:
Q  6 cacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgtt 99  Q
    ||||||||||||||||| || |||||||||| ||||||||||||||| ||||||||||||||      |||||||||||||||||  ||||   ||||||    
T  8694916 cacttaaaattagtcatgttcttaggcatgataaatggtggataatgctctttgttgctatcatttgaatcatcaccatcatcctttaaaaaagcttgtt 8694817  T
Q  100 tgaaacgattc 110  Q
    |||||||||||    
T  8694816 tgaaacgattc 8694806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 11935501 - 11935395
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||| ||||||||||||| ||||||||||||||| |||||| |||||||||| ||||||||| ||||      |||||||||||||||||| |||| |||    
T  11935501 acactcacttaaaattagccatctttttaggcataacaaatagtggataatgatctttgttgttatcatctaaatcatcaccatcatcctctaaaatgac 11935402  T
Q  95 ttgtttg 101  Q
    |||||||    
T  11935401 ttgtttg 11935395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 27457283 - 27457345
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgc 63  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  27457283 acacccactttaaattagtcatctttttaggcatggcaaatggtggataatgctctttgttgc 27457345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 19659589 - 19659646
Alignment:
Q  3 acccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgt 60  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  19659589 acccacttaaaattagtcatctttttaggcatgacaaattgtggataatgctctttgt 19659646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 445007 - 444894
Alignment:
Q  3 acccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggactt 96  Q
    ||||||||||||| |||| ||||||||||| || |||||||||||| ||| ||||| ||| ||||      ||||||| |||||||||| |||| || ||    
T  445007 acccacttaaaatcagtcgtctttttaggcgtggcaaatggtggatcatgatctttattgttatcatctggatcatcaacatcatcctctaaaatgattt 444908  T
Q  97 gtttgaaacgattc 110  Q
    ||||||||||||||    
T  444907 gtttgaaacgattc 444894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 19661790 - 19661832
Alignment:
Q  68 atcatcaccatcatcctccaaaaggacttgtttgaaacgattc 110  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  19661790 atcatcaccatcatcctctaaaaggacttgtttgaaacgattc 19661832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 37923557 - 37923599
Alignment:
Q  68 atcatcaccatcatcctccaaaaggacttgtttgaaacgattc 110  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  37923557 atcatcaccatcatcctttaaaaggacttgtttgaaacgattc 37923599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 1e-40; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 33807866 - 33807981
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  33807866 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 33807965  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  33807966 ttgtttgaaacgattc 33807981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 55517271 - 55517386
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  55517271 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 55517370  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  55517371 ttgtttgaaacgattc 55517386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 11795240 - 11795355
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||      |||||||||||||||||| ||||||||    
T  11795240 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctttcattttaatcatcaccatcatcctctaaaaggac 11795339  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  11795340 ttgtttgaaacgattc 11795355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 28160039 - 28160154
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| |||||||     
T  28160039 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggat 28160138  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  28160139 ttgtttgaaacgattc 28160154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 28264698 - 28264583
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| |||| |||    
T  28264698 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaagac 28264599  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  28264598 ttgtttgaaacgattc 28264583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 4545071 - 4545186
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| |||| |||    
T  4545071 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaatgac 4545170  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||| ||||||||    
T  4545171 ttgtttggaacgattc 4545186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 8882099 - 8882214
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||      |||||||||||||||||| ||||||||    
T  8882099 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctttttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 8882198  T
Q  95 ttgtttgaaacgattc 110  Q
    ||| ||||||||||||    
T  8882199 ttgattgaaacgattc 8882214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17993103 - 17993218
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||      |||||||||||||| ||| ||||||||    
T  17993103 acacccacttaaaattagtcatctttttaggcatgacaaatagtggataatgctctttgttgctatcatctaaatcatcaccatcattctctaaaaggac 17993202  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  17993203 ttgtttgaaacgattc 17993218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 25734309 - 25734424
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||      |||||||||||||||||| |||| |||    
T  25734309 acacccacttaaaattagtcatctttttaggcatgacaaacggtggataatgttatttgttgctatcatctgaatcatcaccatcatcctctaaaatgac 25734408  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  25734409 ttgtttgaaacgattc 25734424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 33174106 - 33174221
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||      |||||||||||||||||| ||||||||    
T  33174106 acacccacttaaaattagtcatctttttatgcatgacaaatggtggataatgctccttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 33174205  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  33174206 ttgtttgaaacgattc 33174221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 40988688 - 40988573
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  40988688 acacccacttaaaattagtcatctttttaggcatgacaaattgtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 40988589  T
Q  95 ttgtttgaaacgattc 110  Q
    |||||||||| |||||    
T  40988588 ttgtttgaaatgattc 40988573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 42273857 - 42273740
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc---at-----caccatcatcctccaaaagg 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||   ||     ||||||||||||| ||||||    
T  42273857 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctaaatcatcacaccatcatcctctaaaagg 42273758  T
Q  93 acttgtttgaaacgattc 110  Q
    ||||||||||||||||||    
T  42273757 acttgtttgaaacgattc 42273740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 23135092 - 23135207
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||      |||||||||||||||||| ||||||||    
T  23135092 acacccacttaaaattagtcatttttttaggcatgccaaatggtggctaatgttctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 23135191  T
Q  95 ttgtttgaaacgattc 110  Q
    || |||||||||||||    
T  23135192 ttatttgaaacgattc 23135207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 26017478 - 26017363
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||| | ||||||||||||      |||||||||||||||||| ||||||||    
T  26017478 acacccacttaaaattagtcatctttttaggcatgataaatagtggataatgctatttgttgctatcatttaaatcatcaccatcatcctctaaaaggac 26017379  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  26017378 ttgtttgaaacgattc 26017363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 28812376 - 28812487
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||      |||||||||||||||||| ||||||||||||    
T  28812376 ccacttaaaattagtcatctttttaggcatggcaaatggtggataatgctctttattgctatcatctaaatcatcaccatcatcctctaaaaggacttgt 28812475  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  28812476 ttgaaacgattc 28812487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 14564851 - 14564737
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||| ||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  14564851 acacccagttaaaattagtcatctttttaggcatggcaaacggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 14564752  T
Q  95 ttgtttgaaacgatt 109  Q
    |||||||||||||||    
T  14564751 ttgtttgaaacgatt 14564737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 31973646 - 31973533
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||      ||||| ||||||||| || ||||||||    
T  31973646 acacccacttaaaattagtcatctttttaggcatggcaaatggtggataatgctctttgttgctatcatctgaatcattaccatcatcttcgaaaaggac 31973547  T
Q  95 ttgtttgaaacgat 108  Q
    ||||||||||||||    
T  31973546 ttgtttgaaacgat 31973533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 2055333 - 2055218
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||| | ||||||||||||      |||||||||||||||||  ||||||||    
T  2055333 acacccacttaaagttaatcatctttttaggcatgacaaatggtggataatgctttttgttgctatcatctgaatcatcaccatcatcctttaaaaggac 2055234  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  2055233 ttgtttgaaacgattc 2055218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 9339212 - 9339327
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| ||||||      |||||||||||||||||| |||||||     
T  9339212 acacccacttaaaattagtcatctttttatgcatgacaaatggtgaataatgctctttgtcgctatcatctaaatcatcaccatcatcctctaaaaggat 9339311  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  9339312 ttgtttgaaacgattc 9339327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17847182 - 17847296
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||      |||||||||||||||||  ||||||||    
T  17847182 acacccacttaaaattagtcatctttt-aggcatggcaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctataaaaggac 17847280  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  17847281 ttgtttgaaacgattc 17847296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19168881 - 19168996
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||      ||||||| ||||||| || |||| |||    
T  19168881 acacccacttaaaatcagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcatcatcatcatctaaaaagac 19168980  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  19168981 ttgtttgaaacgattc 19168996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 24458717 - 24458832
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||| | ||| ||||||||      |||||||||||||||||| ||||||||    
T  24458717 acacccacttaaaattagtcatctttttaggcatggcaaatggaggataatgctatttattgctatcatctgaatcatcaccatcatcctctaaaaggac 24458816  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  24458817 ttgtttgaaacgattc 24458832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 31591130 - 31591016
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||      |||||||||||||||||| |||||||     
T  31591130 acacccacttaaaattagtcat-tttttaggcgtgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggat 31591032  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  31591031 ttgtttgaaacgattc 31591016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 35930094 - 35929980
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||      |||||||||||||||||| |||| |||    
T  35930094 acacccacttaaaattagtcatctttttaggcatgacaaa-ggtggataatgctctttgttgttatcatctgaatcatcaccatcatcctctaaaacgac 35929996  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  35929995 ttgtttgaaacgattc 35929980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 30467089 - 30467208
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaa----aa 90  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||      |||||||||||||||||| ||    ||    
T  30467089 acacccatttaaaattagtcatctttttaggcatggcaaatggtggataatgttctttgttgctatcatctgaatcatcaccatcatcctctaaaaggaa 30467188  T
Q  91 ggacttgtttgaaacgattc 110  Q
    ||||||||||||||||||||    
T  30467189 ggacttgtttgaaacgattc 30467208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 32318008 - 32317941
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatca 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32318008 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatca 32317941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 56555226 - 56555344
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgct---------atcatcatcaccatcatcctccaaaag 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||         |||||||||| |||||||||| ||||     
T  56555226 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctattatctgaatcatcatcatcatcatcctctaaaat 56555325  T
Q  92 gacttgtttgaaacgattc 110  Q
    ||||| |||||||||||||    
T  56555326 gacttctttgaaacgattc 56555344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 25730291 - 25730180
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctat------catcatcaccatcatcctccaaaaggacttgt 98  Q
    ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||       |||||||||||||||||| |||||| |||||    
T  25730291 ccacttaaaattagtcatctttttaggcatagcaaatagtggataatgttctttgttgctattatctaaatcatcaccatcatcctctaaaagggcttgt 25730192  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  25730191 ttgaaacgattc 25730180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 44490374 - 44490259
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||  | ||||||||||||      ||||||||||| |||||| |||||||     
T  44490374 acacccacttaaagttagtcatctttttaggcatgacaaatggtggataatactatttgttgctatcatctaaatcatcaccattatcctctaaaaggat 44490275  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  44490274 ttgtttgaaacgattc 44490259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 48707823 - 48707934
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||      |||||||||||||||||  |||| ||| |||    
T  48707823 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgttatcatctaaatcatcaccatcatcctttaaaatgacctgt 48707922  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  48707923 ttgaaacgattc 48707934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 49118666 - 49118551
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| ||||||||      ||||||||||| |||||| |||||||     
T  49118666 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatactattttttgctatcatctaaatcatcaccattatcctctaaaaggat 49118567  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  49118566 ttgtttgaaacgattc 49118551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12196524 - 12196418
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatcatcaccatcatcctccaaaaggacttgttt 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||   | |||||   ||||||||  ||||||||||||||    
T  12196524 acacccacttaaaattaatcatctttttaggcatgacaaatggtggataatgctctttgttgc---cttcatctaaatcatcctttaaaaggacttgttt 12196428  T
Q  101 gaaacgattc 110  Q
    ||||||||||    
T  12196427 gaaacgattc 12196418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 39995255 - 39995368
Alignment:
Q  3 acccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggactt 96  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||  ||||||||||||||      ||||| | |||||||||| ||||||||||    
T  39995255 acccacttaaaattaatcatctttttaggcatggcaaatggtggataatcctctttgttgctatcatctgaatcattatcatcatcctctaaaaggactt 39995354  T
Q  97 gtttgaaacgattc 110  Q
    ||||||||||||||    
T  39995355 gtttgaaacgattc 39995368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 19496188 - 19496257
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc 70  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  19496188 acacccacttaaaattagtcatctttttaggcatgtcaaatggtggataatgctctttgttgctatcatc 19496257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 23553116 - 23553002
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgt----tctttgttgctatcat-----catcaccatcatcctccaaaaggact 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||     |||||||||||||||  ||||||| |    
T  23553116 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgaatgatctttgttgctatcattgaatcatcaccatcatcctataaaaggatt 23553017  T
Q  96 tgtttgaaacgattc 110  Q
    |||||||||||||||    
T  23553016 tgtttgaaacgattc 23553002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 5227441 - 5227338
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||      |||||||| ||| |||||||||| |||||||    
T  5227441 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctcttcgttgctatcatctgaatcatcacaatcttcctccaaaaagacttgt 5227342  T
Q  99 ttga 102  Q
    ||||    
T  5227341 ttga 5227338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 15985065 - 15984950
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||| ||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||| |||      ||||||||||||||| || | ||||||    
T  15985065 acacctacttaaaatcagtaatctttttaggcatgacaaatggtggataatgctctttgttgcaatcatctaaatcatcaccatcatcttctacaaggac 15984966  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  15984965 ttgtttgaaacgattc 15984950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 24623203 - 24623092
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||| ||| || ||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  24623203 acacccacttaaaatcagttatttttttaggcatgacaaatggtggataatgctctttgttgctatcacctgaatcatcaccatcatcctctaaaaggac 24623104  T
Q  95 ttgtttgaaacg 106  Q
    | ||| ||||||    
T  24623103 tagttcgaaacg 24623092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 37381901 - 37381786
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||      ||||||||| |||||||   ||||||     
T  37381901 acacccacttaaaattagtcatctttttagacatgacaaatggtggataatgctttttgttgctatcatctgaatcatcaccgtcatcctttgaaaggat 37381802  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  37381801 ttgtttgaaacgattc 37381786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 48149554 - 48149439
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||| ||      ||||||  |||||||||| |||| |||    
T  48149554 acacccacttaaaattactcatctttttaggcatgacaaatggtggataatgcactttgttgctttcatttgaatcatcgtcatcatcctctaaaaagac 48149455  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  48149454 ttgtttgaaacgattc 48149439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 50542440 - 50542555
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||| |||||||||||||||||  ||||||||||||||| ||||||||||||||      ||||||| |||||||||  |||| |||    
T  50542440 acacccacttaaaattaatcatctttttaggcatggtaaatggtggataatgctctttgttgctatcatctgaatcatcatcatcatcctttaaaatgac 50542539  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  50542540 ttgtttgaaacgattc 50542555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 22298573 - 22298458
Alignment:
Q  1 acacccacttaaaattagtcatcttttt-aggcatgacaaatggtggataatgttctttgttgctatcatca-----tcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||| ||||||  |||||||||||||||| |||||||||||||||||      ||| |||||||||| |||||||     
T  22298573 acacccacttaaaattagtcatcttttttaggcatagcaaatggtggataatgctctttgttgctatcatctgatcttcatcatcatcctctaaaaggat 22298474  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  22298473 ttgtttgaaacgattc 22298458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 30141194 - 30141304
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcat------catcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||||||      |||||||||||||||| |||| ||     
T  30141194 acacccacttaaaattagtcatctttttaggcattgcaaatgatggataatgctctttgttgctatcatctgcagcatcaccatcatcctctaaaacgaa 30141293  T
Q  95 ttgtttgaaac 105  Q
    |||||||||||    
T  30141294 ttgtttgaaac 30141304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 10588635 - 10588520
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||| ||||||||||||||||||||  ||||||  ||||||| ||||||||||||||      |||||||||||||||||  ||||||||    
T  10588635 acacccacttaaaactagtcatctttttaggcatggtaaatggcagataatgctctttgttgctatcatctgaatcatcaccatcatcctttaaaaggac 10588536  T
Q  95 ttgtttgaaacgattc 110  Q
    |||||| |||||||||    
T  10588535 ttgtttaaaacgattc 10588520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 32118769 - 32118654
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||      ||||| | |||||||||  ||||| ||    
T  32118769 acacccccttaaaattaatcatctttttaggcatgacaaatggtggataacgctctttgttgctatcatctgaatcattatcatcatcctttaaaagaac 32118670  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  32118669 ttgtttgaaacgattc 32118654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 33693419 - 33693534
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||| |||||||||||| |||| |||||| | ||||||| ||||||||||||||      ||||||||||||||||||  |||||||    
T  33693419 acacccacttaaaattattcatctttttagacatggcaaatgatagataatgctctttgttgctatcatctgaatcatcaccatcatcctctgaaaggac 33693518  T
Q  95 ttgtttgaaacgattc 110  Q
    | ||||||||||||||    
T  33693519 tagtttgaaacgattc 33693534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 42549708 - 42549822
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||| | |||||||||||||||||||||| |||||| |||| ||||||||||||||      |||||| ||||||||||| ||||||||    
T  42549708 acacccacttaaaatcaatcatctttttaggcatgacaaa-ggtggaaaatgctctttgttgctatcatctgaatcatctccatcatcctctaaaaggac 42549806  T
Q  95 ttgtttgaaacgattc 110  Q
    || |||||||||||||    
T  42549807 ttatttgaaacgattc 42549822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 48551850 - 48551947
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatcatcaccatcatcctccaaaaggacttgttt 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||            ||| |||||||||| ||||||||||||||    
T  48551850 acacccacttaaaattagtcatctttttaggcatggcaaatggtggataatgttctttg------------tcatcatcatcctctaaaaggacttgttt 48551937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 51371133 - 51371248
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||| ||||||| |||| ||||||||| |||||| ||||||||||||||      ||||||||| |||||||| ||||  ||    
T  51371133 acacccacttaaaattagtcatttttttagacatggcaaatggtgaataatgctctttgttgctatcatctgaatcatcaccgtcatcctctaaaaaaac 51371232  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  51371233 ttgtttgaaacgattc 51371248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 39700100 - 39699985
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||| |||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||  ||||      |||||||| ||||||||| |||| |||    
T  39700100 acactcacttaaaattagtcatctttttaggcatgacaaattgtgaataatgctctttgttaatatcatctgaatcatcactatcatcctctaaaaagac 39700001  T
Q  95 ttgtttgaaacgattc 110  Q
    || |||||||||||||    
T  39700000 ttatttgaaacgattc 39699985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 31208799 - 31208688
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc------atcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||    |  ||||| ||||||||||||||| |||||||||||| ||||      ||||||||||||||| ||||||||    
T  31208799 acacccacttaaaattagtcatct----aaacatgataaatggtggataatgctctttgttgctaacatctaaatcatcaccatcatcctctaaaaggac 31208704  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  31208703 ttgtttgaaacgattc 31208688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 50276224 - 50276336
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||   |||||||||||| |||| ||||||||||| | |||||| |||||      |||||||||||||||||  ||||||||    
T  50276224 acacccacttaaaattagtc---tttttaggcatggcaaacggtggataatgctatttgttactatcatctgaatcatcaccatcatcctttaaaaggac 50276320  T
Q  95 ttgtttgaaacgattc 110  Q
    |||||||||| |||||    
T  50276321 ttgtttgaaatgattc 50276336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 44490232 - 44490150
Alignment:
Q  34 tgacaaatggtggataatgttctttgttgctatcatc------atcaccatcatcctccaaaaggacttgtttgaaacgattc 110  Q
    ||||||||||||||||||  | ||| |||||||||||      |||||||| |||||| ||||||| ||||||||||||||||    
T  44490232 tgacaaatggtggataatactattttttgctatcatctaaatcatcaccattatcctctaaaaggatttgtttgaaacgattc 44490150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12759835 - 12759950
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  12759835 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 12759934  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  12759935 ttgtttgaaacgattc 12759950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 43249498 - 43249613
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  43249498 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatttgaatcatcaccatcatcctctaaaaggac 43249597  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  43249598 ttgtttgaaacgattc 43249613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 2456065 - 2455950
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  2456065 acacccacttaaaattagtcatctttttaggcatgacaaatggtgaataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 2455966  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  2455965 ttgtttgaaacgattc 2455950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16246279 - 16246394
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  16246279 acacccacttaaaattagtcatctttttaggcatgacaaatggtagataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 16246378  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  16246379 ttgtttgaaacgattc 16246394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 25087882 - 25087997
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||  ||||||||    
T  25087882 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatggtctttgttgctatcatctgaatcatcaccatcatcctttaaaaggac 25087981  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  25087982 ttgtttgaaacgattc 25087997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 36211101 - 36210986
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  36211101 acacccacttaaaattagtcatctttttaggcatggcaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 36211002  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  36211001 ttgtttgaaacgattc 36210986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 27328639 - 27328527
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc---atcaccatcatcctccaaaaggacttg 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||   |||| |||||||||| |||||||||||    
T  27328639 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgttatcatctgaatcatcatcatcctctaaaaggacttg 27328540  T
Q  98 tttgaaacgattc 110  Q
    ||| |||||||||    
T  27328539 ttttaaacgattc 27328527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 772061 - 772176
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||      |||||||||||||||||  ||||||||    
T  772061 acacccacttaaaattagtcatctttttaggcatggcaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctttaaaaggac 772160  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  772161 ttgtttgaaacgattc 772176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1106645 - 1106760
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||      |||||||||||||||||| |||| |||    
T  1106645 acacccacttaaaattagtcatctttttaggcatgacaaatggtgaataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaatgac 1106744  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  1106745 ttgtttgaaacgattc 1106760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 3430710 - 3430825
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  3430710 acacccacttaaaattagtcatctttttaggcatggcaaatggtgtataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 3430809  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  3430810 ttgtttgaaacgattc 3430825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 7379018 - 7378903
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  7379018 acacccacttaaaattagtcctctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 7378919  T
Q  95 ttgtttgaaacgattc 110  Q
    |||| |||||||||||    
T  7378918 ttgtgtgaaacgattc 7378903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19180477 - 19180362
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||      |||||||||||||||||| ||||||||    
T  19180477 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatactctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 19180378  T
Q  95 ttgtttgaaacgattc 110  Q
    |||||| |||||||||    
T  19180377 ttgtttaaaacgattc 19180362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 37732279 - 37732394
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  37732279 acacccacttaaaattagtcatctttttatgtatgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 37732378  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  37732379 ttgtttgaaacgattc 37732394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 7297320 - 7297432
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc------atcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||      ||||||||||||||| ||||||||    
T  7297320 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatg--ctttgttgttatcatctaaattatcaccatcatcctctaaaaggac 7297417  T
Q  95 ttgtttgaaacgatt 109  Q
    |||||||||||||||    
T  7297418 ttgtttgaaacgatt 7297432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 29737795 - 29737688
Alignment:
Q  9 ttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgtttga 102  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||| ||||||||    
T  29737795 ttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggatttgtttga 29737696  T
Q  103 aacgattc 110  Q
    ||||||||    
T  29737695 aacgattc 29737688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 38751099 - 38750988
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||      ||||||||| |||||||| ||||||||||||    
T  38751099 ccacttaaaattaatcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccgtcatcctctaaaaggacttgt 38751000  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  38750999 ttgaaacgattc 38750988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41500588 - 41500703
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||      |||||||||||||||||  ||||||||    
T  41500588 acacccgcttaaaattagtcatctttttaggcatggcaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctttaaaaggac 41500687  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  41500688 ttgtttgaaacgattc 41500703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 34253197 - 34253083
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||      || ||||||||||||||| ||||||||    
T  34253197 acacccacttaatattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatttgaatgatcaccatcatcctctaaaaggac 34253098  T
Q  95 ttgtttgaaacgatt 109  Q
    ||||| |||||||||    
T  34253097 ttgttcgaaacgatt 34253083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 8396639 - 8396752
Alignment:
Q  3 acccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggactt 96  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||      ||||||| |||||||||| ||||||||||    
T  8396639 acccacttaaaatcagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcatcatcatcctctaaaaggactt 8396738  T
Q  97 gtttgaaacgattc 110  Q
    |||||||| |||||    
T  8396739 gtttgaaatgattc 8396752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 921077 - 920962
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||| |||      ||||||||||||||||||  |||||||    
T  921077 acacccacttaaaattagtcatctttttatgcatgacaaatggtggataatgctctttattgccatcatctaaatcatcaccatcatcctcttaaaggac 920978  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  920977 ttgtttgaaacgattc 920962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 2056981 - 2056866
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||  |||||||||||||      |||||||||||||||||  ||||||||    
T  2056981 acacccacttaaaattagtcatctttttaggcatggtaaatggtggataatgcactttgttgctatcatctgaatcatcaccatcatcctttaaaaggac 2056882  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  2056881 ttgtttgaaacgattc 2056866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 2094496 - 2094611
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||| ||    
T  2094496 acacccacttaaaattagtcatctttttaagcatggcaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaagaac 2094595  T
Q  95 ttgtttgaaacgattc 110  Q
    |||||||||| |||||    
T  2094596 ttgtttgaaaggattc 2094611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 8899737 - 8899622
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||||||      |||||||| ||||||||| ||||||||    
T  8899737 acacccacttaaaactagtcatctttttaggcatggtaaatggtggataatgctctttgttgctatcatttaaatcatcacaatcatcctctaaaaggac 8899638  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  8899637 ttgtttgaaacgattc 8899622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9276629 - 9276514
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||  ||||||||| |||||||||||||||||||||| ||||||||||| ||      |||||||||||||||||| ||||||||    
T  9276629 acacccacttaaaattagctatctttttatgcatgacaaatggtggataatgctctttgttgctttcatttgaatcatcaccatcatcctctaaaaggac 9276530  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  9276529 ttgtttgaaacgattc 9276514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 11949512 - 11949629
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcc---tccaaaag 91  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||      ||||||||||||||||   || |||||    
T  11949512 acacccacttaatattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctgatctaaaag 11949611  T
Q  92 gacttgtttgaaacgatt 109  Q
    ||||||||||||||||||    
T  11949612 gacttgtttgaaacgatt 11949629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 33865353 - 33865468
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||      ||| |||||||||||||| |||| |||    
T  33865353 acacccacttaaaattagtcatttttttaggcatgacaaatggtggataatactctttgttgctatcatttgaatcttcaccatcatcctctaaaatgac 33865452  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  33865453 ttgtttgaaacgattc 33865468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 45124174 - 45124059
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||      ||||||| |||||||||| ||||||||    
T  45124174 acacccacttaaaattaatcatctttttaggcatgacaaatggtggataatgctccttgttgctatcatctaaatcatcatcatcatcctctaaaaggac 45124075  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||| ||||    
T  45124074 ttgtttgaaacaattc 45124059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 23672959 - 23673074
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc---atcaccatcatcctcc---aaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||   ||||  ||||||||||   |||| |||    
T  23672959 acacccacttaaaattagtcatctttttaggcatgacaaatggtggaaaatgctctttgttgctatcatctaaatcattatcatcctcctctaaaatgac 23673058  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  23673059 ttgtttgaaacgattc 23673074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 28650512 - 28650629
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc---at-----caccatcatcctccaaaagg 92  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||   ||     ||||||||||||| ||||||    
T  28650512 acacccacttaaaattagtcatctttttagacatgacaaatggtggataatgctctttgttgttatcatctaaatcatcacaccatcatcctctaaaagg 28650611  T
Q  93 acttgtttgaaacgattc 110  Q
    ||||||||||||||||||    
T  28650612 acttgtttgaaacgattc 28650629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 33107055 - 33107167
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||| |||||||  |||||| ||||||||||||||      |||||||||||||||||| |||| |||    
T  33107055 acacccacttaaaattagtcatctttttaggcatgaaaaatggtaaataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaatgac 33107154  T
Q  95 ttgtttgaaacga 107  Q
    |||||||||||||    
T  33107155 ttgtttgaaacga 33107167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 37838352 - 37838283
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc 70  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37838352 acacccacttaaaattagtcatctttttaggcatgacaaatagtggataatgttctttgttgctatcatc 37838283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 17134284 - 17134169
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||| |||||||||||||||| ||| |||||| ||||||||| ||||||||||||||      ||||| |||||||||||| ||||||||    
T  17134284 acacccacttaaaagtagtcatctttttaggaatggcaaatgatggataatgctctttgttgctatcatgtgaatcataaccatcatcctctaaaaggac 17134185  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  17134184 ttgtttgaaacgattc 17134169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 37654159 - 37654048
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    ||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||      |||||||| ||||||||| ||||| ||||||    
T  37654159 ccacttaaaatcagtcatctttttaggcatgacaaatgatgaataatgttctttgttgctatcatctaaatcatcactatcatcctctaaaagtacttgt 37654060  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  37654059 ttgaaacgattc 37654048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 40854660 - 40854549
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||| ||  |||| || ||||    
T  40854660 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcattctttaaaaagatttgt 40854561  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  40854560 ttgaaacgattc 40854549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41178105 - 41178220
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||||||| ||||||||||||||      ||||||| |||||||||| ||||| ||    
T  41178105 acacccacttaaaattagtcatttttttaggcatggtaaatggtggataatgctctttgttgctatcatctaaatcatcatcatcatcctctaaaagaac 41178204  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  41178205 ttgtttgaaacgattc 41178220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 2315061 - 2315176
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||| ||||||||||||||||||||||||||||||  ||||||||||||||| | ||||||| ||||      ||||||| |||||||||| ||||||||    
T  2315061 acactcacttaaaattagtcatctttttaggcatggtaaatggtggataatgctatttgttgttatcatgtaaatcatcatcatcatcctcgaaaaggac 2315160  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  2315161 ttgtttgaaacgattc 2315176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 36444314 - 36444429
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc------atcaccatcatcctccaaaaggac 94  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||      ||||||||||||||  |||| |||    
T  36444314 acacctacttaaaattagtcatctttttaagcatggcaaatggtggataatgctctttgttgctatcatctaaattatcaccatcatcctttaaaatgac 36444413  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||| ||||||||    
T  36444414 ttgtttgtaacgattc 36444429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 42630017 - 42629948
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  42630017 acacccacttaaaattagtcatctttttaggcatgacaaatggtggatgatgctctttgttgttatcatc 42629948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 17484640 - 17484751
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    ||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||      ||||||| |||||||||| |||  || ||||    
T  17484640 ccacttaaaattagtcatctttttaagcatggaaaatggtggataatgttctttgttgctatcatctgaatcatcatcatcatcctctaaacagaattgt 17484739  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  17484740 ttgaaacgattc 17484751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19916073 - 19916187
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctat------catcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||| || | |||||||||||||| |||||||| |||||||||| |||| ||||||||       ||||||||||||| |||| |||| |||    
T  19916073 acacccacttaatatcaatcatctttttaggcttgacaaattgtggataatgctcttggttgctattgtctgaatcatcaccatcaccctctaaaa-gac 19916171  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  19916172 ttgtttgaaacgattc 19916187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 9331811 - 9331760
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatg 52  Q
    |||||||| ||| |||||  ||||||||| ||||||||||||||||||||||    
T  9331811 acacccacctaagattagctatctttttatgcatgacaaatggtggataatg 9331760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 37838261 - 37838219
Alignment:
Q  68 atcatcaccatcatcctccaaaaggacttgtttgaaacgattc 110  Q
    |||||||||||||||||| |||| ||||||||||||| |||||    
T  37838261 atcatcaccatcatcctctaaaatgacttgtttgaaatgattc 37838219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 8141572 - 8141687
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||| || ||||||||    
T  8141572 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcattcgaatcatcaccatcatcatctaaaaggac 8141671  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  8141672 ttgtttgaaacgattc 8141687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 9878870 - 9878985
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||      |||||||||||||||||| ||||||||    
T  9878870 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctgtcatctgaatcatcaccatcatcctctaaaaggac 9878969  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  9878970 ttgtttgaaacgattc 9878985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 28425449 - 28425564
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  28425449 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 28425548  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  28425549 ttgtttgaaacgattc 28425564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 46825586 - 46825471
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  46825586 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 46825487  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  46825486 ttgtttgaaacgattc 46825471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 23767500 - 23767615
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      ||||||| |||||||||| ||||||||    
T  23767500 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcatcatcatcctctaaaaggac 23767599  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  23767600 ttgtttgaaacgattc 23767615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 26069947 - 26069832
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||      |||||||||||||||||| ||||||||    
T  26069947 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgatctttgttgttatcatctaaatcatcaccatcatcctctaaaaggac 26069848  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  26069847 ttgtttgaaacgattc 26069832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 36157763 - 36157878
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  36157763 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 36157862  T
Q  95 ttgtttgaaacgattc 110  Q
    |||||||||| |||||    
T  36157863 ttgtttgaaatgattc 36157878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 45670576 - 45670687
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||| |||| |||||||    
T  45670576 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatctgaatcatcaccatcatcctctaaaatgacttgt 45670675  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  45670676 ttgaaacgattc 45670687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 49094797 - 49094912
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||      |||||||||||||||||| ||||| ||    
T  49094797 acacccacttaaaattagtcatctttttaggcataacaaatggtggataatgttctttgttgctatcatcagaatcatcaccatcatcctctaaaagaac 49094896  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  49094897 ttgtttgaaacgattc 49094912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9962806 - 9962700
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatcatcaccatcatcctccaaaaggacttgttt 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||||||||| |||| |||| ||||    
T  9962806 acacccacttaaaattagtcatctttttaggcatgataaatggtggataatgttctttgttgctatc---atcaccatcatcctctaaaaagactagttt 9962710  T
Q  101 gaaacgattc 110  Q
    ||||||||||    
T  9962709 gaaacgattc 9962700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 12143127 - 12143018
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  12143127 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 12143028  T
Q  95 ttgtttgaaa 104  Q
    ||||||||||    
T  12143027 ttgtttgaaa 12143018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19315695 - 19315580
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| | || |||    
T  19315695 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctagaaagac 19315596  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  19315595 ttgtttgaaacgattc 19315580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 33674072 - 33673957
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||      |||||||| ||||||||| ||||||||    
T  33674072 acacccacttaaaattagtcatctttttaggcatggcaaatggtggataatgctctttgttgctatcatctaaatcatcacaatcatcctctaaaaggac 33673973  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  33673972 ttgtttgaaacgattc 33673957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38473712 - 38473827
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| |||| |||    
T  38473712 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaatgac 38473811  T
Q  95 ttgtttgaaacgattc 110  Q
    | ||||||||||||||    
T  38473812 tagtttgaaacgattc 38473827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 45350801 - 45350915
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc------atcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||      |||||||||||||| | |||||||    
T  45350801 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttttttgttgctatcatctaaattatcaccatcatcct-ctaaaggac 45350899  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  45350900 ttgtttgaaacgattc 45350915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 48669486 - 48669597
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||      |||||||||||||||||| ||||||||||||    
T  48669486 ccacttaaaattagtcatctttttaggcatgacaaataatggataatgttctttgttgctatcatctgaatcatcaccatcatcctctaaaaggacttgt 48669585  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  48669586 ttgaaacgattc 48669597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 49814355 - 49814240
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||      |||||||||||||||||| ||||||||    
T  49814355 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctttttattgctatcatctgaatcatcaccatcatcctctaaaaggac 49814256  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  49814255 ttgtttgaaacgattc 49814240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 52350010 - 52350125
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||      |||||||||||||| ||| ||||||||    
T  52350010 acacccacttaaaattagtcatctttttaggcatgacaaatagtggataatgctctttgttgctatcatctaaatcatcaccatcattctctaaaaggac 52350109  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  52350110 ttgtttgaaacgattc 52350125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 9974897 - 9974783
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||      |||||||| ||||||||| ||||||||    
T  9974897 acacccacttaaaattagtcatctttttaggcatggtaaatggtggataatgttctttgttgctatcatctgaatcatcacaatcatcctctaaaaggac 9974798  T
Q  95 ttgtttgaaacgatt 109  Q
    |||||||||||||||    
T  9974797 ttgtttgaaacgatt 9974783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 18782176 - 18782290
Alignment:
Q  2 cacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggact 95  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||      |||||||||| ||| ||| |||||||||    
T  18782176 cacccacttaaaattagtcatctttttaggcatggcaaatggtggataatgttctttgttgctatcatctgaatcatcaccaccattctctaaaaggact 18782275  T
Q  96 tgtttgaaacgattc 110  Q
    |||||||||||||||    
T  18782276 tgtttgaaacgattc 18782290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 50099271 - 50099161
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| |||| |||||||    
T  50099271 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaatgacttgt 50099172  T
Q  99 ttgaaacgatt 109  Q
    |||||||||||    
T  50099171 ttgaaacgatt 50099161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 44979281 - 44979389
Alignment:
Q  8 cttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgtttg 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| |||| ||||||||||    
T  44979281 cttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaatgacttgtttg 44979380  T
Q  102 aaacgattc 110  Q
    |||||||||    
T  44979381 aaacgattc 44979389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 7553102 - 7553217
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||      ||||||||||||||||||  ||| |||    
T  7553102 acacccacttaaaattagtcatctttttagccatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctgaaaagac 7553201  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  7553202 ttgtttgaaacgattc 7553217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 7608852 - 7608967
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||      ||||||||||| |||||| |||| |||    
T  7608852 acacccacttaaaattagtcatgtttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccattatcctctaaaaagac 7608951  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  7608952 ttgtttgaaacgattc 7608967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18892384 - 18892269
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  18892384 acacccactgaaaattagtcatccttttaggaatgacaaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 18892285  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  18892284 ttgtttgaaacgattc 18892269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19274614 - 19274499
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||      ||||||| |||||||||| |||| |||    
T  19274614 acacccacttaaaattagtcatctttttaggcatgacaaatagtggataatgctctttgttgctatcatctaaatcatcatcatcatcctctaaaacgac 19274515  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  19274514 ttgtttgaaacgattc 19274499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 23228288 - 23228395
Alignment:
Q  9 ttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgtttga 102  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||      |||||||||||||||||| ||||||||||||||||    
T  23228288 ttaaaattagtcatctttttaggcatgacaaatggtagataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggacttgtttga 23228387  T
Q  103 aacgattc 110  Q
    ||||||||    
T  23228388 aacgattc 23228395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 25988357 - 25988472
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||      |||||||| ||||| ||| ||||||||    
T  25988357 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctttttgttgctatcatctaaatcatcactatcattctctaaaaggac 25988456  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  25988457 ttgtttgaaacgattc 25988472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 26549443 - 26549328
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||      |||||||||||||| ||| ||||| ||    
T  26549443 acacccacttaaaattagtcatctttttaggcatgataaatggtggataatgctctttgttgctatcatctaaatcatcaccatcattctctaaaagaac 26549344  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  26549343 ttgtttgaaacgattc 26549328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 34971135 - 34971020
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||      ||||||  |||||||||| ||||||||    
T  34971135 acactcacttaaaattagtcatctttttaggcatggcaaatggtggataatgttctttgttgctatcatctgaatcatcgtcatcatcctctaaaaggac 34971036  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  34971035 ttgtttgaaacgattc 34971020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 46051505 - 46051390
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  46051505 acacccacttaaaactagtcatctttttaggcatggcaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 46051406  T
Q  95 ttgtttgaaacgattc 110  Q
    | ||||||||||||||    
T  46051405 tagtttgaaacgattc 46051390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 46095165 - 46095276
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatca------tcatcaccatcatcctccaaaaggacttgt 98  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||      ||||||||||||||||| ||||||||||||    
T  46095165 ccacttaaaattagtcatctttttaaacatgacaaatggtggataatgctctttgttgctatcatctaagtcatcaccatcatcctctaaaaggacttgt 46095264  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  46095265 ttgaaacgattc 46095276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 48802417 - 48802532
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  48802417 acacctacttaaaattagtcatctttgtaggcatgataaatggtggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 48802516  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  48802517 ttgtttgaaacgattc 48802532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 50689998 - 50689883
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  50689998 acacccacttaaaattagtcatctttttaggcatagcaaatgatggataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaaggac 50689899  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  50689898 ttgtttgaaacgattc 50689883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 52147048 - 52146933
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| |||| |||    
T  52147048 acacccacttaaaattattcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaatgac 52146949  T
Q  95 ttgtttgaaacgattc 110  Q
    | ||||||||||||||    
T  52146948 tagtttgaaacgattc 52146933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 7651717 - 7651600
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc---at-----caccatcatcctccaaaagg 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||   ||     ||||||||||||| | ||||    
T  7651717 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctaaatcatcacaccatcatcctctataagg 7651618  T
Q  93 acttgtttgaaacgattc 110  Q
    ||||||||||||||||||    
T  7651617 acttgtttgaaacgattc 7651600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 48319132 - 48319240
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||      |||||||||||||||||| |||| |||    
T  48319132 acacccacttaaaatcagtcatctttttaggcattacaaatggtggataatgttctttgttgctatcatctgaatcatcaccatcatcctctaaaatgac 48319231  T
Q  95 ttgtttgaa 103  Q
    |||||||||    
T  48319232 ttgtttgaa 48319240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12964701 - 12964586
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||      |||||||||||||||||| ||||| ||    
T  12964701 acacccacttaaaattagtcatctttttaggcatgacaaatgttgtataatgctctttgttgctatcatctaaatcatcaccatcatcctctaaaagaac 12964602  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||| ||||    
T  12964601 ttgtttgaaacaattc 12964586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21965120 - 21965005
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc------atcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||      ||||||||||| ||| |||| |||    
T  21965120 acacccacttaaaattagtcatctttttaggcatggcaaatggtgtataatgttctttgttgctatcatccgaattatcaccatcattctctaaaaagac 21965021  T
Q  95 ttgtttgaaacgattc 110  Q
    || |||||||||||||    
T  21965020 ttatttgaaacgattc 21965005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 36781258 - 36781373
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||| ||||||| |||||| |||||||||||||||| | ||||||||||||      |||||||||||||||||| ||||||||    
T  36781258 acacccacttaaaattagtcgtctttttgggcatggcaaatggtggataatgctttttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 36781357  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  36781358 ttgtttgaaacgattc 36781373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 25800699 - 25800594
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||      |||||||||||||||||| ||||||||    
T  25800699 acacccacttaaaattagtcatctttttaggcatgataaatggtggataatgttcttttttgctttcatcttaatcatcaccatcatcctctaaaaggac 25800600  T
Q  95 ttgttt 100  Q
    ||||||    
T  25800599 ttgttt 25800594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 33325780 - 33325667
Alignment:
Q  3 acccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggactt 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||      |||||||||||||||||| |||| || ||    
T  33325780 acccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgcactcatctaaatcatcaccatcatcctctaaaatgattt 33325681  T
Q  97 gtttgaaacgattc 110  Q
    ||||||||||||||    
T  33325680 gtttgaaacgattc 33325667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 32373650 - 32373754
Alignment:
Q  12 aaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc------atcaccatcatcctccaaaaggacttgtttgaaac 105  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||      ||||||||||||||| ||||||||||||||||||     
T  32373650 aaattagtcatctttttaggcatgacaaatggtggataatgctctttgttactatcatctgaatgatcaccatcatcctctaaaaggacttgtttgaaaa 32373749  T
Q  106 gattc 110  Q
    |||||    
T  32373750 gattc 32373754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41982321 - 41982437
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctc-caaaagga 93  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||      ||||||||||||||||||  |||| ||    
T  41982321 acacccatttaaaattagtcatatttttaggcatgacaaatggtggataatgttttttgttgctatcatctgaatcatcaccatcatcctctaaaaatga 41982420  T
Q  94 cttgtttgaaacgattc 110  Q
    |||||||||||||||||    
T  41982421 cttgtttgaaacgattc 41982437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 33194737 - 33194852
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||| ||||||||||||||||||| | |||||||| ||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  33194737 acacccacttaaaatcagtcatctttttaggcatggcgaatggtggttaatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 33194836  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||| ||||||||||    
T  33194837 ttgttcgaaacgattc 33194852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 37216951 - 37216836
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||      |||||||||||||||||  ||||| ||    
T  37216951 acacccacttaaaattagtcatctttttagacatggcaaatggtggataatgttctttgttggtatcatctaaatcatcaccatcatcctttaaaagcac 37216852  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||| ||||    
T  37216851 ttgtttgaaacaattc 37216836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 21929572 - 21929461
Alignment:
Q  3 acccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggactt 96  Q
    ||||||||||||||||||||||||||||  ||| ||||||||||||||| |||||||||||||||      |||||||||||||||||| ||||| ||||    
T  21929572 acccacttaaaattagtcatctttttag--atggcaaatggtggataatcttctttgttgctatcatctgaatcatcaccatcatcctctaaaagaactt 21929475  T
Q  97 gtttgaaacgattc 110  Q
    ||||||||||||||    
T  21929474 gtttgaaacgattc 21929461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 33714458 - 33714560
Alignment:
Q  14 attagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgtttgaaacga 107  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||      ||||||||||| |||||| ||||| |||||||||||||||    
T  33714458 attagtcatctttttaggcatgacaaatggtggataatattctttgttgctatcatctgaatcatcaccattatcctctaaaagaacttgtttgaaacga 33714557  T
Q  108 ttc 110  Q
    |||    
T  33714558 ttc 33714560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 24204559 - 24204672
Alignment:
Q  3 acccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggactt 96  Q
    ||||||||||||| ||||||||||||||||||| |||||| ||||||||| ||||| ||||||||      |||||||||||||||||| ||||||||||    
T  24204559 acccacttaaaatgagtcatctttttaggcatggcaaatgatggataatgctctttattgctatcatctaaatcatcaccatcatcctctaaaaggactt 24204658  T
Q  97 gtttgaaacgattc 110  Q
    ||||||||| ||||    
T  24204659 gtttgaaacaattc 24204672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 52067737 - 52067855
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgct---------atcatcatcaccatcatcctccaaaag 91  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||         |||||||||| |||||||||| ||||     
T  52067737 acacccacttaaaattattcatctttttagggatgacaaatggtggataatgctctttgttgctatcatctgaatcatcatcatcatcatcctctaaaat 52067836  T
Q  92 gacttgtttgaaacgattc 110  Q
    |||||||||||||||||||    
T  52067837 gacttgtttgaaacgattc 52067855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 17983984 - 17984053
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc 70  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  17983984 acacccacttaaaattagtcatctttttaggcatgacaaatggtagataatgctctttgttgctatcatc 17984053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 40721388 - 40721291
Alignment:
Q  10 taaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatcatcaccatcatcctccaaaaggacttgtttgaaacgatt 109  Q
    |||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||| | |  ||||||||| |||||||||||||||||||||||    
T  40721388 taaaattaattatctttttaggcatgacaaatggtggataatgctctttgttgctatcatc-tga--atcatcctctaaaaggacttgtttgaaacgatt 40721292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41106071 - 41106006
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctat 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41106071 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctat 41106006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 5400921 - 5400811
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc------atcaccatcatcctccaaaaggacttgt 98  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||  | |||||||||||||||      ||||||||||||||| |||||||||| |    
T  5400921 ccacttaaaattagtcatctttttaggcatg-caaatggtggataatactatttgttgctatcatctgaataatcaccatcatcctctaaaaggacttct 5400823  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  5400822 ttgaaacgattc 5400811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18917579 - 18917464
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||| |||||      |||||||  ||||||||| |||| |||    
T  18917579 acacccacttaaaattagtcatctttttaggcatggcaaatggtggataattctctttgttactatcatctgaatcatcattatcatcctctaaaaagac 18917480  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  18917479 ttgtttgaaacgattc 18917464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43396730 - 43396615
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||| ||||  |||||| ||||||||| ||||||||||||||      |||||||||||||| ||| |||| |||    
T  43396730 acacccacttaaaattagtcatctttttaagcatagcaaatgatggataatgctctttgttgctatcatctgaatcatcaccatcatactctaaaatgac 43396631  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  43396630 ttgtttgaaacgattc 43396615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 50533438 - 50533323
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||| |||||  ||||||||| ||||||||||||||      |||||||||||||||||  |||| |||    
T  50533438 acacccacttaaaattagtcatctttttaggcatgtcaaattttggataatgctctttgttgctatcatctgaatcatcaccatcatcctttaaaatgac 50533339  T
Q  95 ttgtttgaaacgattc 110  Q
    || |||||||||||||    
T  50533338 ttttttgaaacgattc 50533323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 16705923 - 16705810
Alignment:
Q  3 acccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggactt 96  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||| |||||      ||||||  ||| |||||| ||||||||||    
T  16705923 acccacttaaaattagtcatctttttaggcatggaaaatggtggataatgctctttgtttctatcacctgaatcatcgtcattatcctctaaaaggactt 16705824  T
Q  97 gtttgaaacgattc 110  Q
    ||||||||||||||    
T  16705823 gtttgaaacgattc 16705810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6711495 - 6711380
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||| ||||||||||  ||||  ||||||||||||||| ||||||||||||||      |||||||||||||||||  |||| |||    
T  6711495 acacccacttaaaattagccatctttttacacatggtaaatggtggataatgctctttgttgctatcatttgaatcatcaccatcatcctttaaaatgac 6711396  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  6711395 ttgtttgaaacgattc 6711380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 17989864 - 17989968
Alignment:
Q  12 aaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgtttgaaac 105  Q
    |||||||||||||||||||||||||||||| ||| |||||| | |||||| |||||      |||||||||||||||||| |||||||||||||||||||    
T  17989864 aaattagtcatctttttaggcatgacaaatagtgaataatgctatttgttactatcatttaaatcatcaccatcatcctctaaaaggacttgtttgaaac 17989963  T
Q  106 gattc 110  Q
     ||||    
T  17989964 aattc 17989968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 49973972 - 49973882
Alignment:
Q  26 tttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgtttgaaacgattc 110  Q
    ||||||||||||||||||||||||||| ||||||||||||||      ||||||| |||||||||  ||||||||||||||||||||||||    
T  49973972 tttaggcatgacaaatggtggataatgctctttgttgctatcatctaaatcatcatcatcatcctttaaaaggacttgtttgaaacgattc 49973882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16506874 - 16506943
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc 70  Q
    ||||||||||||||| || |||||||||| ||||| |||||||||||||||| |||||||||||||||||    
T  16506874 acacccacttaaaatcagccatctttttaagcatggcaaatggtggataatgatctttgttgctatcatc 16506943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 30281686 - 30281571
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||| |  ||| |||||||||||||||  ||||||||||||||| ||||||||||||||      |||||||||||||| ||| ||||| |     
T  30281686 acacccacttaataccagttatctttttaggcatgtaaaatggtggataatgctctttgttgctatcatatgaatcatcaccatcattctctaaaagtat 30281587  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  30281586 ttgtttgaaacgattc 30281571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1986 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 169 - 54
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| | ||||||    
T  169 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatatgaatcatcaccatcatcctctacaaggac 70  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  69 ttgtttgaaacgattc 54  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0693 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 5113 - 5228
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcatc------atcaccatcatcctccaaaaggac 94  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||      ||||||||||||||| ||||||||    
T  5113 acaccctcttaaaattagtcatctttttagacatgacaaatggtggataatgttatttgttgctaacatctgaattatcaccatcatcctctaaaaggac 5212  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  5213 ttgtttgaaacgattc 5228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 252524 - 252638
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||| ||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||    
T  252524 acacccagttaaaattagtcatctttttaggcatggcaaacggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaaggac 252623  T
Q  95 ttgtttgaaacgatt 109  Q
    |||||||||||||||    
T  252624 ttgtttgaaacgatt 252638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0392 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 289 - 402
Alignment:
Q  3 acccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggactt 96  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||| | ||    
T  289 acccacttaaaattattcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaagaattt 388  T
Q  97 gtttgaaacgattc 110  Q
    ||||||||||||||    
T  389 gtttgaaacgattc 402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 48017 - 47908
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||      |||||||||||||||||| ||||| ||    
T  48017 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatattttttgttgctatcatctgaatcatcaccatcatcctctaaaagaac 47918  T
Q  95 ttgtttgaaa 104  Q
    ||||||||||    
T  47917 ttgtttgaaa 47908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 218937 - 218825
Alignment:
Q  4 cccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttg 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      ||||| || ||||||||| |||| ||||||    
T  218937 cccacttaaaattagtcatctttttaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcattactatcatcctctaaaatgacttg 218838  T
Q  98 tttgaaacgattc 110  Q
    |||||||||||||    
T  218837 tttgaaacgattc 218825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 2059 - 2174
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggac 94  Q
    ||||| ||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| ||||| ||    
T  2059 acacctacttaaaatcagtcatcttattaggcatgacaaatggtggataatgctctttgttgctatcatctgaatcatcaccatcatcctctaaaagaac 2158  T
Q  95 ttgtttgaaacgattc 110  Q
    ||||||||||||||||    
T  2159 ttgtttgaaacgattc 2174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 13146 - 13035
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    ||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||      |||||||||||||||||| |||| |||||||    
T  13146 ccacttaaaattattcatctttttaggcatggcaaatgatggataatgttctttgttgctatcatctgaatcatcaccatcatcctctaaaaagacttgt 13047  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  13046 ttgaaacgattc 13035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 59698 - 59809
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatc------atcatcaccatcatcctccaaaaggacttgt 98  Q
    ||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||      |||||||||||||||||| |||| |||||||    
T  59698 ccacttaaaattattcatctttttaggcatggcaaatgatggataatgttctttgttgctatcatctgaatcatcaccatcatcctctaaaaagacttgt 59797  T
Q  99 ttgaaacgattc 110  Q
    ||||||||||||    
T  59798 ttgaaacgattc 59809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 5237 - 5123
Alignment:
Q  5 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgt----tctttgttgctatcat-----catcaccatcatcctccaaaaggact 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||     |||||||||||||||  ||||||| |    
T  5237 ccacttaaaattagtcatctttttaggcatgacaaatggtggataatgaatgatctttgttgctatcattgaatcatcaccatcatcctataaaaggatt 5138  T
Q  96 tgtttgaaacgattc 110  Q
    |||||||||||||||    
T  5137 tgtttgaaacgattc 5123  T

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Target: scaffold0130 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 19831 - 19768
Alignment:
Q  6 cacttaaaattagtcatctttttaggcatgacaaatggtggataatgttctttgttgctatcat 69  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  19831 cacttaaaattagtcatctttttaggcatgacaaatagtggataatgctctttgttgctatcat 19768  T

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Target: scaffold0122 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 11413 - 11305
Alignment:
Q  1 acacccacttaaaattagtcatctttttaggcatgacaaatggtggataatgtt-ctttgttgctatcatcatcaccatcatcctccaaaaggacttgtt 99  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||| || |  |   |  |||||||||||||||||| |||||||||||||    
T  11413 acacccacttaaaattagtcatctttttaggcatggtaaatggtggataatgttgctatcatctga--atcatcaccatcatcctctaaaaggacttgtt 11316  T
Q  100 tgaaacgattc 110  Q
    |||||||||||    
T  11315 tgaaacgattc 11305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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