View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2515_low_12 (Length: 259)

Name: NF2515_low_12
Description: NF2515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2515_low_12
NF2515_low_12
[»] chr5 (65 HSPs)
chr5 (66-245)||(4743741-4743920)
chr5 (1-66)||(13156238-13156303)
chr5 (1-70)||(19955655-19955724)
chr5 (1-66)||(43403215-43403280)
chr5 (1-65)||(3036730-3036794)
chr5 (1-65)||(8023286-8023350)
chr5 (1-65)||(39276151-39276215)
chr5 (4-66)||(12714037-12714099)
chr5 (4-66)||(12775265-12775327)
chr5 (1-71)||(15444181-15444251)
chr5 (1-71)||(19526477-19526547)
chr5 (5-62)||(27131052-27131109)
chr5 (1-62)||(39743867-39743928)
chr5 (1-65)||(2179474-2179538)
chr5 (1-65)||(2672154-2672218)
chr5 (1-65)||(3671040-3671104)
chr5 (1-65)||(9160030-9160094)
chr5 (1-65)||(10698022-10698086)
chr5 (1-65)||(13227903-13227967)
chr5 (1-65)||(16856321-16856385)
chr5 (1-65)||(35235895-35235959)
chr5 (1-68)||(24801544-24801611)
chr5 (1-63)||(12362959-12363021)
chr5 (6-71)||(36686576-36686641)
chr5 (1-65)||(1175546-1175610)
chr5 (1-65)||(5997248-5997312)
chr5 (6-66)||(6279643-6279703)
chr5 (5-65)||(14646717-14646777)
chr5 (1-65)||(31168309-31168373)
chr5 (5-65)||(35235081-35235141)
chr5 (1-65)||(42321149-42321213)
chr5 (4-65)||(2235838-2235899)
chr5 (1-70)||(15531184-15531253)
chr5 (4-65)||(25871662-25871723)
chr5 (6-66)||(5381185-5381245)
chr5 (5-65)||(32383587-32383647)
chr5 (1-65)||(35640668-35640732)
chr5 (1-60)||(9586489-9586548)
chr5 (17-69)||(5592337-5592389)
chr5 (7-63)||(26698347-26698403)
chr5 (7-63)||(26968079-26968135)
chr5 (1-65)||(29391434-29391498)
chr5 (17-60)||(10328443-10328486)
chr5 (10-65)||(11061820-11061875)
chr5 (6-65)||(30773511-30773569)
chr5 (1-63)||(3670071-3670133)
chr5 (20-70)||(6603259-6603309)
chr5 (16-65)||(8285573-8285622)
chr5 (17-70)||(19348435-19348488)
chr5 (1-37)||(1175520-1175556)
chr5 (1-65)||(4220844-4220903)
chr5 (1-37)||(8023366-8023402)
chr5 (1-37)||(13227957-13227993)
chr5 (1-37)||(24801492-24801528)
chr5 (1-37)||(32381055-32381091)
chr5 (1-37)||(35235949-35235985)
chr5 (1-37)||(36686531-36686567)
chr5 (6-65)||(22976392-22976451)
chr5 (1-40)||(24801518-24801557)
chr5 (1-40)||(39743915-39743954)
chr5 (7-64)||(2498429-2498486)
chr5 (17-65)||(649454-649502)
chr5 (1-37)||(8023340-8023376)
chr5 (1-37)||(9586538-9586574)
chr5 (1-37)||(19526425-19526461)
[»] chr2 (60 HSPs)
chr2 (66-245)||(40745623-40745802)
chr2 (1-75)||(13527257-13527331)
chr2 (1-70)||(41323533-41323602)
chr2 (1-65)||(37356894-37356958)
chr2 (1-67)||(36711836-36711902)
chr2 (1-70)||(8815932-8816001)
chr2 (1-65)||(4452855-4452919)
chr2 (1-65)||(28381979-28382043)
chr2 (4-65)||(15569928-15569989)
chr2 (1-65)||(5040515-5040579)
chr2 (7-63)||(7570552-7570608)
chr2 (1-65)||(21865991-21866055)
chr2 (1-64)||(18710899-18710962)
chr2 (1-65)||(9887714-9887778)
chr2 (6-70)||(24401443-24401507)
chr2 (1-65)||(43136382-43136446)
chr2 (6-65)||(8705837-8705896)
chr2 (6-69)||(38880080-38880143)
chr2 (6-65)||(43506898-43506957)
chr2 (177-244)||(43790037-43790104)
chr2 (7-64)||(7693463-7693520)
chr2 (4-65)||(10838903-10838964)
chr2 (6-66)||(7399617-7399677)
chr2 (1-65)||(37000214-37000278)
chr2 (1-65)||(39168493-39168557)
chr2 (10-65)||(13762534-13762589)
chr2 (6-65)||(31615711-31615770)
chr2 (6-65)||(41796071-41796130)
chr2 (17-70)||(2545747-2545800)
chr2 (7-64)||(4056691-4056748)
chr2 (1-53)||(650151-650203)
chr2 (6-65)||(6759914-6759973)
chr2 (4-58)||(4385040-4385094)
chr2 (7-65)||(9052363-9052421)
chr2 (5-58)||(13111108-13111161)
chr2 (22-63)||(26912391-26912432)
chr2 (1-37)||(2265529-2265565)
chr2 (1-37)||(4452909-4452945)
chr2 (1-37)||(5040489-5040525)
chr2 (10-62)||(6231492-6231544)
chr2 (1-37)||(8705905-8705941)
chr2 (1-37)||(8705931-8705967)
chr2 (1-37)||(16487603-16487639)
chr2 (1-37)||(21865965-21866001)
chr2 (1-37)||(28382059-28382095)
chr2 (1-37)||(36711918-36711954)
chr2 (6-70)||(38843582-38843646)
chr2 (1-37)||(43136356-43136392)
chr2 (31-70)||(7212688-7212727)
chr2 (7-65)||(2046467-2046525)
chr2 (27-65)||(8687727-8687765)
chr2 (7-65)||(24020633-24020691)
chr2 (7-52)||(2758679-2758724)
chr2 (32-65)||(40868693-40868726)
chr2 (1-37)||(8340508-8340544)
chr2 (1-37)||(28382033-28382069)
chr2 (1-37)||(36711892-36711928)
chr2 (1-37)||(43136330-43136366)
chr2 (10-62)||(43293461-43293513)
chr2 (1-37)||(43506966-43507002)
[»] chr1 (67 HSPs)
chr1 (66-245)||(36153258-36153437)
chr1 (1-66)||(15314000-15314065)
chr1 (1-65)||(26205054-26205118)
chr1 (1-65)||(29379757-29379821)
chr1 (1-65)||(30780046-30780110)
chr1 (1-65)||(33561201-33561265)
chr1 (1-65)||(36300425-36300489)
chr1 (1-65)||(39827319-39827383)
chr1 (1-65)||(323595-323659)
chr1 (1-65)||(1918803-1918867)
chr1 (1-65)||(3271387-3271451)
chr1 (1-65)||(13120941-13121005)
chr1 (1-65)||(29586913-29586977)
chr1 (1-65)||(38677145-38677209)
chr1 (1-65)||(40888559-40888623)
chr1 (6-70)||(42063607-42063671)
chr1 (1-64)||(17499223-17499286)
chr1 (1-65)||(29703527-29703591)
chr1 (1-65)||(32367710-32367774)
chr1 (1-65)||(41150568-41150632)
chr1 (6-65)||(36838023-36838082)
chr1 (6-65)||(44910582-44910641)
chr1 (10-68)||(46928211-46928269)
chr1 (5-65)||(30720993-30721053)
chr1 (1-53)||(34320126-34320178)
chr1 (16-75)||(6814901-6814960)
chr1 (6-65)||(33152697-33152756)
chr1 (4-59)||(33525254-33525309)
chr1 (4-54)||(26844479-26844529)
chr1 (22-68)||(38966826-38966872)
chr1 (20-69)||(7710307-7710356)
chr1 (7-63)||(7025678-7025734)
chr1 (1-53)||(47133895-47133947)
chr1 (4-62)||(3661485-3661543)
chr1 (10-60)||(25135757-25135807)
chr1 (7-65)||(34319296-34319354)
chr1 (10-60)||(37671485-37671535)
chr1 (10-60)||(37704614-37704664)
chr1 (7-65)||(40720240-40720298)
chr1 (7-53)||(42613445-42613491)
chr1 (20-65)||(19898242-19898287)
chr1 (16-65)||(34087760-34087808)
chr1 (1-37)||(1918751-1918787)
chr1 (22-62)||(9169750-9169790)
chr1 (1-37)||(15313974-15314010)
chr1 (1-37)||(26205002-26205038)
chr1 (1-37)||(29379679-29379715)
chr1 (1-37)||(29379705-29379741)
chr1 (1-37)||(36300479-36300515)
chr1 (22-65)||(25602681-25602724)
chr1 (6-37)||(47133937-47133968)
chr1 (7-65)||(7780489-7780547)
chr1 (6-64)||(9769064-9769122)
chr1 (16-58)||(15349676-15349718)
chr1 (27-65)||(44718299-44718337)
chr1 (17-67)||(49184462-49184512)
chr1 (19-64)||(9768553-9768598)
chr1 (16-65)||(10721523-10721572)
chr1 (20-61)||(17047463-17047504)
chr1 (16-65)||(47049401-47049450)
chr1 (1-37)||(1918777-1918813)
chr1 (1-37)||(23710735-23710771)
chr1 (1-37)||(26205028-26205064)
chr1 (1-37)||(29379731-29379767)
chr1 (1-37)||(32367764-32367800)
chr1 (1-37)||(33561255-33561291)
chr1 (32-64)||(40934838-40934870)
[»] chr3 (59 HSPs)
chr3 (66-245)||(43785754-43785931)
chr3 (1-65)||(19947658-19947722)
chr3 (1-65)||(37089011-37089075)
chr3 (1-65)||(2579341-2579405)
chr3 (1-65)||(29717566-29717630)
chr3 (1-65)||(37528085-37528149)
chr3 (1-65)||(40562677-40562741)
chr3 (1-65)||(29080619-29080683)
chr3 (1-65)||(33392435-33392499)
chr3 (1-60)||(44846346-44846405)
chr3 (1-63)||(35500383-35500445)
chr3 (1-62)||(21707841-21707902)
chr3 (4-65)||(52858649-52858710)
chr3 (4-65)||(55227126-55227187)
chr3 (6-65)||(38186518-38186577)
chr3 (6-65)||(46972789-46972848)
chr3 (6-65)||(52165414-52165473)
chr3 (7-65)||(2852653-2852711)
chr3 (1-66)||(25571131-25571196)
chr3 (1-53)||(4241034-4241086)
chr3 (1-70)||(47896957-47897027)
chr3 (20-65)||(40479406-40479451)
chr3 (6-70)||(14338321-14338385)
chr3 (5-61)||(48943329-48943385)
chr3 (10-65)||(42463373-42463428)
chr3 (6-65)||(43526480-43526539)
chr3 (7-62)||(52226119-52226174)
chr3 (22-65)||(54671570-54671613)
chr3 (6-64)||(45369653-45369711)
chr3 (10-60)||(46318006-46318056)
chr3 (5-66)||(35101023-35101084)
chr3 (22-66)||(892746-892790)
chr3 (1-37)||(29080673-29080709)
chr3 (10-62)||(32025581-32025633)
chr3 (1-37)||(35500331-35500367)
chr3 (1-37)||(40562757-40562793)
chr3 (1-53)||(44545948-44546000)
chr3 (1-37)||(46247161-46247197)
chr3 (1-53)||(48378707-48378759)
chr3 (17-65)||(52594677-52594725)
chr3 (10-62)||(52867514-52867566)
chr3 (22-65)||(28676315-28676358)
chr3 (21-64)||(30813568-30813611)
chr3 (6-65)||(41519301-41519360)
chr3 (21-60)||(42497828-42497867)
chr3 (7-65)||(194162-194220)
chr3 (5-66)||(12063018-12063080)
chr3 (32-66)||(44748203-44748237)
chr3 (22-64)||(50316504-50316546)
chr3 (20-65)||(38891367-38891412)
chr3 (20-65)||(45344381-45344426)
chr3 (1-37)||(2579395-2579431)
chr3 (1-37)||(19947712-19947748)
chr3 (27-63)||(32839553-32839589)
chr3 (1-37)||(35500357-35500393)
chr3 (1-37)||(40562731-40562767)
chr3 (16-64)||(40932224-40932272)
chr3 (16-64)||(41247054-41247102)
chr3 (5-53)||(51709816-51709864)
[»] chr4 (73 HSPs)
chr4 (1-65)||(45520169-45520233)
chr4 (1-76)||(29414245-29414320)
chr4 (1-74)||(7707120-7707193)
chr4 (1-66)||(25198665-25198730)
chr4 (1-69)||(27397096-27397164)
chr4 (1-65)||(4516514-4516578)
chr4 (1-65)||(21370548-21370612)
chr4 (1-65)||(39086920-39086984)
chr4 (1-65)||(55495217-55495281)
chr4 (1-65)||(56373191-56373255)
chr4 (1-66)||(18583572-18583637)
chr4 (5-70)||(43225058-43225123)
chr4 (1-66)||(45906881-45906946)
chr4 (5-70)||(46896024-46896089)
chr4 (6-70)||(4392063-4392127)
chr4 (1-65)||(9042957-9043021)
chr4 (1-65)||(11151266-11151330)
chr4 (1-65)||(27184970-27185034)
chr4 (1-65)||(37114637-37114701)
chr4 (1-65)||(53407902-53407966)
chr4 (1-65)||(56269414-56269478)
chr4 (6-65)||(22037695-22037754)
chr4 (6-65)||(45780106-45780165)
chr4 (1-63)||(44433257-44433319)
chr4 (4-65)||(8942625-8942686)
chr4 (1-66)||(11601419-11601484)
chr4 (1-66)||(55855848-55855913)
chr4 (4-66)||(15636482-15636544)
chr4 (1-63)||(33116812-33116874)
chr4 (4-65)||(8829138-8829199)
chr4 (17-70)||(37832727-37832780)
chr4 (1-58)||(53275419-53275476)
chr4 (1-65)||(31679598-31679662)
chr4 (1-65)||(35842133-35842197)
chr4 (1-65)||(52670721-52670785)
chr4 (6-65)||(5460079-5460138)
chr4 (1-64)||(12233311-12233374)
chr4 (5-64)||(43780144-43780203)
chr4 (7-62)||(50503260-50503315)
chr4 (5-63)||(28307937-28307995)
chr4 (1-66)||(4938695-4938760)
chr4 (1-66)||(33004420-33004485)
chr4 (8-65)||(40496774-40496831)
chr4 (22-66)||(25439854-25439898)
chr4 (7-67)||(33510120-33510180)
chr4 (6-66)||(37971053-37971113)
chr4 (10-65)||(4390777-4390832)
chr4 (1-60)||(35776760-35776819)
chr4 (22-65)||(42117608-42117651)
chr4 (1-62)||(29664644-29664712)
chr4 (7-65)||(49551731-49551789)
chr4 (1-51)||(51010447-51010497)
chr4 (4-65)||(26827245-26827306)
chr4 (6-63)||(30561429-30561486)
chr4 (17-66)||(37338641-37338690)
chr4 (10-79)||(43077439-43077508)
chr4 (7-64)||(53225046-53225103)
chr4 (1-37)||(4938776-4938812)
chr4 (21-65)||(15015359-15015403)
chr4 (10-66)||(17716446-17716502)
chr4 (1-37)||(33004501-33004537)
chr4 (17-65)||(48056096-48056144)
chr4 (22-65)||(42123870-42123913)
chr4 (19-65)||(22431554-22431600)
chr4 (6-76)||(22893277-22893347)
chr4 (6-76)||(22944945-22945015)
chr4 (39-69)||(24953520-24953550)
chr4 (10-63)||(36485688-36485741)
chr4 (1-37)||(9031385-9031421)
chr4 (1-37)||(27397154-27397190)
chr4 (7-67)||(29627563-29627623)
chr4 (1-37)||(46895994-46896030)
chr4 (32-72)||(47416875-47416915)
[»] chr7 (43 HSPs)
chr7 (1-68)||(21313316-21313383)
chr7 (1-66)||(40636520-40636585)
chr7 (1-62)||(48814986-48815047)
chr7 (1-66)||(43254914-43254979)
chr7 (1-65)||(36245744-36245808)
chr7 (1-65)||(42375156-42375220)
chr7 (1-65)||(42586749-42586813)
chr7 (1-65)||(45686224-45686288)
chr7 (1-65)||(48831421-48831485)
chr7 (1-66)||(21254002-21254067)
chr7 (1-62)||(34709961-34710022)
chr7 (1-70)||(35588329-35588398)
chr7 (6-65)||(33203005-33203064)
chr7 (1-65)||(10311396-10311460)
chr7 (1-65)||(45221413-45221477)
chr7 (5-65)||(47470383-47470443)
chr7 (7-73)||(40894162-40894228)
chr7 (8-65)||(790609-790666)
chr7 (4-65)||(31512008-31512069)
chr7 (4-65)||(43135182-43135243)
chr7 (17-65)||(23030606-23030654)
chr7 (1-65)||(32169500-32169564)
chr7 (22-65)||(21745128-21745171)
chr7 (7-62)||(44745434-44745489)
chr7 (5-63)||(40259382-40259440)
chr7 (17-63)||(46878629-46878675)
chr7 (1-62)||(482340-482401)
chr7 (21-70)||(5220921-5220970)
chr7 (1-65)||(17845289-17845353)
chr7 (6-66)||(44597393-44597453)
chr7 (16-60)||(45673124-45673168)
chr7 (7-63)||(47585150-47585206)
chr7 (17-63)||(36610871-36610917)
chr7 (16-62)||(49148983-49149029)
chr7 (32-73)||(9488165-9488206)
chr7 (32-65)||(33099726-33099759)
chr7 (33-66)||(35001673-35001706)
chr7 (16-65)||(48730280-48730329)
chr7 (1-37)||(9488120-9488156)
chr7 (1-37)||(43135153-43135189)
chr7 (1-37)||(43254888-43254924)
chr7 (1-37)||(45221467-45221503)
chr7 (1-37)||(45686278-45686314)
[»] chr8 (58 HSPs)
chr8 (1-65)||(36680794-36680858)
chr8 (1-66)||(32541944-32542009)
chr8 (1-70)||(36112173-36112242)
chr8 (1-65)||(25024108-25024172)
chr8 (1-65)||(31582476-31582540)
chr8 (1-70)||(31687406-31687475)
chr8 (1-65)||(10619594-10619658)
chr8 (1-65)||(27781852-27781916)
chr8 (1-65)||(44826710-44826774)
chr8 (1-68)||(41314279-41314346)
chr8 (6-65)||(43276117-43276176)
chr8 (3-65)||(38170797-38170859)
chr8 (1-63)||(39872008-39872070)
chr8 (1-65)||(6339066-6339130)
chr8 (1-65)||(39703032-39703096)
chr8 (6-65)||(17116273-17116332)
chr8 (1-63)||(30338286-30338348)
chr8 (7-63)||(34394700-34394756)
chr8 (6-65)||(37559862-37559921)
chr8 (6-65)||(44158008-44158067)
chr8 (1-62)||(16423590-16423650)
chr8 (4-65)||(23415313-23415374)
chr8 (5-62)||(28710050-28710107)
chr8 (5-62)||(28717397-28717454)
chr8 (16-65)||(40046348-40046397)
chr8 (1-65)||(17082434-17082498)
chr8 (22-65)||(1893229-1893272)
chr8 (6-65)||(2641744-2641803)
chr8 (22-65)||(41693372-41693415)
chr8 (19-65)||(37961067-37961113)
chr8 (16-65)||(16832579-16832628)
chr8 (4-65)||(37586563-37586624)
chr8 (1-37)||(17116228-17116264)
chr8 (1-37)||(30338260-30338296)
chr8 (1-37)||(31582424-31582460)
chr8 (1-37)||(36112232-36112268)
chr8 (1-37)||(44826778-44826814)
chr8 (20-75)||(8271638-8271693)
chr8 (10-65)||(8435812-8435867)
chr8 (1-35)||(42142119-42142153)
chr8 (32-65)||(7379888-7379921)
chr8 (16-65)||(13970726-13970775)
chr8 (16-65)||(15278493-15278542)
chr8 (16-65)||(15458862-15458911)
chr8 (5-62)||(22958144-22958201)
chr8 (10-62)||(3427052-3427104)
chr8 (1-37)||(6339040-6339076)
chr8 (10-66)||(9339810-9339866)
chr8 (1-37)||(10619568-10619604)
chr8 (1-37)||(17082356-17082392)
chr8 (1-37)||(17082382-17082418)
chr8 (1-37)||(17082408-17082444)
chr8 (5-37)||(17116206-17116238)
chr8 (1-37)||(23415258-23415294)
chr8 (1-37)||(25024056-25024092)
chr8 (1-37)||(25024082-25024118)
chr8 (1-37)||(31582450-31582486)
chr8 (1-37)||(39319472-39319508)
[»] scaffold0349 (1 HSPs)
scaffold0349 (1-70)||(9359-9428)
[»] scaffold0027 (2 HSPs)
scaffold0027 (1-66)||(41062-41127)
scaffold0027 (1-37)||(41117-41153)
[»] chr6 (29 HSPs)
chr6 (1-70)||(27719937-27720006)
chr6 (1-66)||(34232221-34232286)
chr6 (1-65)||(559063-559127)
chr6 (1-65)||(1805721-1805785)
chr6 (1-72)||(6709040-6709111)
chr6 (1-64)||(31451303-31451366)
chr6 (1-65)||(2443176-2443240)
chr6 (1-65)||(7316930-7316994)
chr6 (1-65)||(28721115-28721179)
chr6 (1-65)||(12432025-12432089)
chr6 (1-65)||(14226928-14226992)
chr6 (1-65)||(32732535-32732599)
chr6 (5-65)||(34684372-34684432)
chr6 (7-65)||(3636231-3636289)
chr6 (7-65)||(29413332-29413390)
chr6 (17-65)||(12140154-12140202)
chr6 (6-65)||(28077218-28077277)
chr6 (1-72)||(31099370-31099441)
chr6 (1-68)||(34904663-34904730)
chr6 (1-37)||(14226982-14227018)
chr6 (1-37)||(32732483-32732519)
chr6 (1-37)||(34232302-34232338)
chr6 (7-66)||(5300924-5300983)
chr6 (6-65)||(22757008-22757067)
chr6 (10-65)||(29822318-29822373)
chr6 (19-60)||(20783919-20783960)
chr6 (6-62)||(3107204-3107260)
chr6 (1-37)||(32732509-32732545)
chr6 (1-37)||(34232276-34232312)
[»] scaffold0122 (1 HSPs)
scaffold0122 (5-69)||(11779-11843)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-65)||(25646-25710)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-66)||(129502-129567)
[»] scaffold0246 (1 HSPs)
scaffold0246 (1-65)||(7779-7843)
[»] scaffold0471 (2 HSPs)
scaffold0471 (1-70)||(2053-2122)
scaffold0471 (1-37)||(2112-2148)
[»] scaffold0197 (3 HSPs)
scaffold0197 (1-65)||(28364-28428)
scaffold0197 (1-68)||(27589-27656)
scaffold0197 (1-39)||(28416-28454)
[»] scaffold0362 (1 HSPs)
scaffold0362 (1-65)||(6151-6215)
[»] scaffold0016 (4 HSPs)
scaffold0016 (6-65)||(92843-92902)
scaffold0016 (1-37)||(92963-92999)
scaffold0016 (1-37)||(92911-92947)
scaffold0016 (1-37)||(92937-92973)
[»] scaffold0002 (1 HSPs)
scaffold0002 (6-65)||(432007-432066)
[»] scaffold0041 (1 HSPs)
scaffold0041 (7-73)||(72056-72122)
[»] scaffold0418 (1 HSPs)
scaffold0418 (8-65)||(5204-5261)
[»] scaffold0012 (1 HSPs)
scaffold0012 (10-65)||(98709-98764)
[»] scaffold0173 (1 HSPs)
scaffold0173 (13-65)||(22220-22272)
[»] scaffold0343 (1 HSPs)
scaffold0343 (10-58)||(10056-10104)


Alignment Details
Target: chr5 (Bit Score: 160; Significance: 2e-85; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 66 - 245
Target Start/End: Original strand, 4743741 - 4743920
Alignment:
Q  66 aaaattattttgtagtgtaagaggaaacgaaagtttaagaattgacactgacaaaaataaaagtaataataatgttaagtgaatagctgcaagtgtgaga 165  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4743741 aaaattattttgtagtgtgagaggaaatgaaagtttaagaattgacagtgacaaaaataaaagtaataataatgttaagtgaatagctgcaagtgtgaga 4743840  T
Q  166 caccctacttcccatggatcttgatgatgaatagtggatatacaatttgtagtgatgatggtgaagaacgatgaagagtg 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  4743841 caccctacttcccatggatcttgatgatgaatagtggatatacaatttgtagtgatgatagtgaagaatgatgaagagtg 4743920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 13156303 - 13156238
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  13156303 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcca 13156238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 19955724 - 19955655
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    ||||||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||||    
T  19955724 tagcttatcagctaaaagctatcagctaacttatcagctatccgctatttttaccaaacagagccaaaat 19955655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 43403215 - 43403280
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  43403215 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcca 43403280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3036794 - 3036730
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  3036794 tagcttataagctaaaagctatcagctagcttatcagttatccgctatttttaccaaacagagcc 3036730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 8023350 - 8023286
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  8023350 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 8023286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 39276151 - 39276215
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  39276151 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 39276215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 12714037 - 12714099
Alignment:
Q  4 cttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  12714037 cttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcca 12714099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 12775265 - 12775327
Alignment:
Q  4 cttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  12775265 cttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcca 12775327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15444181 - 15444251
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaatt 71  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||| ||| ||||    
T  15444181 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagaaccataatt 15444251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19526477 - 19526547
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaatt 71  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| |||||    
T  19526477 tagcttataagctaaaagctatcagatagcttatcagctatccgctatttttaccaaacagagcctaaatt 19526547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 27131052 - 27131109
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  27131052 ttatcagctaaaagctatcagctagcttatcagttatccgctatttttaccaaacaga 27131109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39743928 - 39743867
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  39743928 tagcttatcagttaaaagctatcagctagcttatcagttatccgctatttttaccaaacaga 39743867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 2179474 - 2179538
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||  ||||||||||||||| |||||||||||    
T  2179474 tagcttatcagctaaaagctatcagctagcttatcaactatccgctatttttaccaaacagagcc 2179538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 2672154 - 2672218
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  2672154 tagcttataagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 2672218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3671040 - 3671104
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||| |||||||||||    
T  3671040 tagcttatcagctaaaagctatcagctagcttataagctatccgctatttttaccaaacagagcc 3671104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 9160094 - 9160030
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| |||| |||||||||| |||||||||||    
T  9160094 tagcttatcagctaaaagctatcagctagcttatcagctatctgctatttttaccaaacagagcc 9160030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 10698022 - 10698086
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||| ||||||| || |||||||||||||||||||||||| |||||||||||    
T  10698022 tagcttatcagctaaaaactatcagctaacttatcagttatccgctatttttaccaaacagagcc 10698086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 13227967 - 13227903
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||| |||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  13227967 tagcttatcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 13227903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 16856385 - 16856321
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||||||||| |||||||||||    
T  16856385 tagcttatcagctaaaagctatcaactagcttatcagctatccgctatttttaccaaacagagcc 16856321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 35235959 - 35235895
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| || |||||||| ||||||||||||||| |||||||||||    
T  35235959 tagcttatcagctaaaagctatcagctaacttatcagctatccgctatttttaccaaacagagcc 35235895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 24801544 - 24801611
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaa 68  Q
    ||||||||||| ||||||||||||  ||||||||||| ||||||||||||||| ||||||||||||||    
T  24801544 tagcttatcagttaaaagctatcaactagcttatcagctatccgctatttttaccaaacagagccaaa 24801611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 12363021 - 12362959
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagag 63  Q
    |||||||||||||| |||||||||| ||||||||||| ||||||||||||||| |||||||||    
T  12363021 tagcttatcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagag 12362959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 36686576 - 36686641
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaatt 71  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||||||||| |||||    
T  36686576 tatcagctaaaaactatcagctagcttatcagctatccgctatttttaccaaacagagcctaaatt 36686641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1175546 - 1175610
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||| |||||||| |||||||| || ||||||||||||||| |||||||||||    
T  1175546 tagcttatcagctaaacgctatcagctagcttataagctatccgctatttttaccaaacagagcc 1175610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 5997312 - 5997248
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||| || ||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  5997312 tagcttatcagctataaactatcagctagcttatcagctatccgctatttttaccaaacagagcc 5997248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 6279703 - 6279643
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    ||||||||| ||||||||||||||||||| || ||||||||||||||||| ||||||||||    
T  6279703 tatcagctataagctatcagttagcttataagctatccgctatttttatcgaacagagcca 6279643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 14646777 - 14646717
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||| || |||||||| ||||||||||||||| |||||||||||    
T  14646777 ttatcagctaaaagctatcagctaacttatcagctatccgctatttttaccaaacagagcc 14646717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 31168373 - 31168309
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||||    
T  31168373 tagcttataagctaaaagctatcagctatcttatcagctatccactatttttatcaaacagagcc 31168309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 35235141 - 35235081
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||| || |||||||| ||||||||||||||| |||||||||||    
T  35235141 ttatcagctaaaagctatcagctaacttatcagctatccgctatttttaccaaacagagcc 35235081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 42321213 - 42321149
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||| |||||||||  |||||||| |||||||||||||||||| |||||||||||    
T  42321213 tagcttatcagctataagctatcaactagcttataagttatccgctatttttaccaaacagagcc 42321149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 2235899 - 2235838
Alignment:
Q  4 cttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| |||||| |||||| || |||||||| |||||||||||||||||||||||||||    
T  2235899 cttatcaggtaaaagttatcagctaacttatcagctatccgctatttttatcaaacagagcc 2235838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 15531184 - 15531253
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    |||||||| |||||||| ||||||| || |||||||| ||||||||||||||| ||||||||||| ||||    
T  15531184 tagcttataagctaaaaactatcagctaacttatcagctatccgctatttttaccaaacagagcctaaat 15531253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 25871723 - 25871662
Alignment:
Q  4 cttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||| ||| |||||| ||| ||||||| |||||||||||||||||||||||||||    
T  25871723 cttatcagctacaagttatcagctagtttatcagctatccgctatttttatcaaacagagcc 25871662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 5381245 - 5381185
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    ||||||||| ||||||| || ||||||||||| ||||||||||||||| ||||||||||||    
T  5381245 tatcagctataagctataagctagcttatcagctatccgctatttttaccaaacagagcca 5381185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 32383587 - 32383647
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||| ||||||| || |||||||| ||||||||||||||| |||||||||||    
T  32383587 ttatcagctaaaaactatcagctaacttatcagctatccgctatttttaccaaacagagcc 32383647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 35640668 - 35640732
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| ||||||||| |||||| ||||||||||  ||||||||||||||| |||||||||||    
T  35640668 tagcttataagctaaaagttatcagctagcttatcaactatccgctatttttaccaaacagagcc 35640732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 9586548 - 9586489
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaaca 60  Q
    ||||||||||||||||| ||||||| || |||||||| ||||||||||||||| ||||||    
T  9586548 tagcttatcagctaaaaactatcagctaacttatcagctatccgctatttttaccaaaca 9586489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 5592337 - 5592389
Alignment:
Q  17 agctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaa 69  Q
    ||||||||| ||||||||||| ||||||||||||||| |||| ||||||||||    
T  5592337 agctatcagctagcttatcagctatccgctatttttaccaaagagagccaaaa 5592389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 26698403 - 26698347
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagag 63  Q
    |||||||| ||||||| || || ||||||||||||||| ||||||||||||||||||    
T  26698403 atcagctataagctataagctaacttatcagttatccgttatttttatcaaacagag 26698347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 26968135 - 26968079
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagag 63  Q
    |||||||| ||||||| || || ||||||||||||||| ||||||||||||||||||    
T  26968135 atcagctataagctataagctaacttatcagttatccgttatttttatcaaacagag 26968079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29391498 - 29391434
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||| |||||||||||||| ||||||||||| ||   |||||||||| |||||||||||    
T  29391498 tagcttatcaactaaaagctatcagctagcttatcagctaaaagctatttttaccaaacagagcc 29391434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 10328443 - 10328486
Alignment:
Q  17 agctatcagttagcttatcagttatccgctatttttatcaaaca 60  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  10328443 agctatcagttagcttattagttatcctctatttttatcaaaca 10328486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 11061875 - 11061820
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||| ||||||| || ||||||||||| ||||||||||||||| |||||||||||    
T  11061875 agctataagctataagctagcttatcagctatccgctatttttaccaaacagagcc 11061820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 30773569 - 30773511
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||||||| || ||||| || ||||||||||||||| |||||||||||    
T  30773569 tatcagctaaaagctatcagctaacttat-agctatccgctatttttaccaaacagagcc 30773511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3670071 - 3670133
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagag 63  Q
    |||||||||||||||||| |||||  || |||||||  || ||||||||||||||||||||||    
T  3670071 tagcttatcagctaaaagttatcaactaacttatcaactagccgctatttttatcaaacagag 3670133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 6603309 - 6603259
Alignment:
Q  20 tatcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    |||||| ||| ||||||| ||||||||||||||| ||||||||||||||||    
T  6603309 tatcagctagtttatcagctatccgctatttttaccaaacagagccaaaat 6603259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 8285573 - 8285622
Alignment:
Q  16 aagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||| || ||||||||||| ||||||||||||||| |||||||||||    
T  8285573 aagctataagctagcttatcagctatccgctatttttaccaaacagagcc 8285622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 19348435 - 19348488
Alignment:
Q  17 agctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    ||||||||| |||||||| || ||||||||||||||| ||||||||||| ||||    
T  19348435 agctatcagctagcttataagctatccgctatttttaccaaacagagcctaaat 19348488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 1175520 - 1175556
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  1175520 tagcttatcagctaaaagctatcagctagcttatcag 1175556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4220903 - 4220844
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||     || |||||||||||||||||||| ||||||    
T  4220903 tagcttatcagctaaaagctatcagctagc-----agctatccgctatttttatcaaagagagcc 4220844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 8023402 - 8023366
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  8023402 tagcttatcagctaaaagctatcagctagcttatcag 8023366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 13227993 - 13227957
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  13227993 tagcttatcagctaaaagctatcagctagcttatcag 13227957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 24801492 - 24801528
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  24801492 tagcttatcagctaaaagctatcagctagcttatcag 24801528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 32381091 - 32381055
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  32381091 tagcttatcagctaaaagctatcagctagcttatcag 32381055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 35235985 - 35235949
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  35235985 tagcttatcagctaaaagctatcagctagcttatcag 35235949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 36686531 - 36686567
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  36686531 tagcttatcagctaaaagctatcagctagcttatcag 36686567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 22976451 - 22976392
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||| || |||| || ||||||||||| ||||||||||||||| ||| |||||||    
T  22976451 tatcagctataaactataagctagcttatcagctatccgctatttttaccaagcagagcc 22976392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 24801518 - 24801557
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagtta 40  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  24801518 tagcttatcagctataagctatcagctagcttatcagtta 24801557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 39743954 - 39743915
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagtta 40  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  39743954 tagcttatcagctaaaagctatcaactagcttatcagtta 39743915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 2498429 - 2498486
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagc 64  Q
    |||||||| || ||||||| || |||||||| ||| || |||||||||||||||||||    
T  2498429 atcagctataaactatcagctaacttatcagctatacgttatttttatcaaacagagc 2498486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 649454 - 649502
Alignment:
Q  17 agctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||| |||||||| || |||||||| |||||| |||||||||||    
T  649454 agctatcagctagcttataagctatccgctgtttttaccaaacagagcc 649502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 8023376 - 8023340
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||| |||||||||| |||||||||||    
T  8023376 tagcttatcagctataagctatcagctagcttatcag 8023340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 9586574 - 9586538
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||| |||||||||||||||| |||||||||||    
T  9586574 tagcttataagctaaaagctatcagctagcttatcag 9586538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 19526425 - 19526461
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  19526425 tagcttatcagttaaaagctatcagctagcttatcag 19526461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 160; Significance: 2e-85; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 66 - 245
Target Start/End: Original strand, 40745623 - 40745802
Alignment:
Q  66 aaaattattttgtagtgtaagaggaaacgaaagtttaagaattgacactgacaaaaataaaagtaataataatgttaagtgaatagctgcaagtgtgaga 165  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40745623 aaaattattttgtagtgtgagaggaaatgaaagtttaagaattgacagtgacaaaaataaaagtaataataatgttaagtgaatagctgcaagtgtgaga 40745722  T
Q  166 caccctacttcccatggatcttgatgatgaatagtggatatacaatttgtagtgatgatggtgaagaacgatgaagagtg 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  40745723 caccctacttcccatggatcttgatgatgaatagtggatatacaatttgtagtgatgatagtgaagaatgatgaagagtg 40745802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 13527331 - 13527257
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaattattt 75  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||| ||||    
T  13527331 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagccaaaatgattt 13527257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 41323533 - 41323602
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  41323533 tagcttatcagctaaaagctatcagttagcttatcagctatccgctatttttaccaaacagagcctaaat 41323602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 37356894 - 37356958
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  37356894 tagcttatcagctaaaagctatcagctagcttatcagttatccgctatttttaccaaacagagcc 37356958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 36711902 - 36711836
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaa 67  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  36711902 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagccaa 36711836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 8815932 - 8816001
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||| ||||    
T  8815932 tagcttatcagctaaaagctatcaactagcttatcagttatccgctatttttaccaaacagagcctaaat 8816001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4452919 - 4452855
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  4452919 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 4452855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 28382043 - 28381979
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  28382043 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 28381979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 15569928 - 15569989
Alignment:
Q  4 cttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  15569928 cttatcagctaaaagctatcagatagcttatcagctatccgctatttttaccaaacagagcc 15569989  T

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Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 5040515 - 5040579
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||||||||||| |||||||||||    
T  5040515 tagcttatcagctaaaagctgtcagctagcttatcagctatccgctatttttaccaaacagagcc 5040579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 7570552 - 7570608
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagag 63  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  7570552 atcagctataagctatcagttagcttatcagttatccgctatttttaccaaacagag 7570608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21865991 - 21866055
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| || |||||||| ||||||||||||||| |||||||||||    
T  21865991 tagcttatcagctaaaagctatcagctaccttatcagctatccgctatttttaccaaacagagcc 21866055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 18710899 - 18710962
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagc 64  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||    
T  18710899 tagcttataagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagc 18710962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 9887714 - 9887778
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||| |||||||||| || |||||||| ||||||||||||||| |||||||||||    
T  9887714 tagcttatcagctataagctatcagctaacttatcagctatccgctatttttaccaaacagagcc 9887778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 24401507 - 24401443
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||||| ||||||||||| ||||    
T  24401507 tatcagctaaaagctatcagctagtttatcagctatccgctatttttaccaaacagagcctaaat 24401443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 43136382 - 43136446
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||| |||||||||| || |||||||| ||||||||||||||| |||||||||||    
T  43136382 tagcttatcagctataagctatcagctaccttatcagctatccgctatttttaccaaacagagcc 43136446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 8705896 - 8705837
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  8705896 tatcagctaaaaactatcagctagcttatcagctatccgctatttttaccaaacagagcc 8705837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 38880143 - 38880080
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaa 69  Q
    ||||||||||| |||||||| |||||||| || ||||||||||||||| |||||||||||||||    
T  38880143 tatcagctaaacgctatcagctagcttataagctatccgctatttttaccaaacagagccaaaa 38880080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 43506957 - 43506898
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||||||| ||||||||||| |||||| |||||||| |||||||||||    
T  43506957 tatcagctaaaagctatcagctagcttatcagctatccgttatttttaccaaacagagcc 43506898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 43790037 - 43790104
Alignment:
Q  177 ccatggatcttgatgatgaatagtggatatacaatttgtagtgatgatggtgaagaacgatgaagagt 244  Q
    |||||||||||||||||||| ||||||||||  || | ||||||||||||||||||| ||||||||||    
T  43790037 ccatggatcttgatgatgaagagtggatataggatatttagtgatgatggtgaagaatgatgaagagt 43790104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 7693463 - 7693520
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagc 64  Q
    |||||||| |||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  7693463 atcagctataagctatcaactagcttatcagctatccgctatttttatcaaacagagc 7693520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 10838964 - 10838903
Alignment:
Q  4 cttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||||||||| || |||||||| ||||| ||||||||| |||||||||||    
T  10838964 cttatcagctaaaagctatcagctaacttatcagctatccactatttttaccaaacagagcc 10838903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 7399677 - 7399617
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    ||||||||| ||||||| || ||||||||||| ||||||||||||||| ||||||||||||    
T  7399677 tatcagctataagctataagctagcttatcagctatccgctatttttaccaaacagagcca 7399617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 37000214 - 37000278
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||| ||||||  ||||||||||  ||||||||||||||| |||||||||||    
T  37000214 tagcttatcagctaaaaactatcaactagcttatcaactatccgctatttttaccaaacagagcc 37000278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 39168493 - 39168557
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||  ||||||||||  |||||| |||||||| |||||||||||    
T  39168493 tagcttatcagctaaaagctatcaactagcttatcaactatccgttatttttaccaaacagagcc 39168557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 13762534 - 13762589
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||| || |||||||||||||||| || |||||||||||||||||||||||||||    
T  13762534 agctataaactatcagttagcttataagctatccgctatttttatcaaacagagcc 13762589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 31615770 - 31615711
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||||||| ||| ||||||| ||||| ||||||||| |||||||||||    
T  31615770 tatcagctaaaagctatcagctagtttatcagctatccactatttttaccaaacagagcc 31615711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 41796130 - 41796071
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||||    
T  41796130 tatcagctaaaagctatcagctaacttatcagctatctgctatttttaccaaacagagcc 41796071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 2545800 - 2545747
Alignment:
Q  17 agctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    ||||||||| ||||||||||| ||||||||||||||| ||||||||||| ||||    
T  2545800 agctatcagctagcttatcagctatccgctatttttaccaaacagagcctaaat 2545747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 4056691 - 4056748
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagc 64  Q
    |||||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||    
T  4056691 atcagctataagctatcagctagcttataagctatccgctatttttaccaaacagagc 4056748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 650203 - 650151
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctattttta 53  Q
    ||||||||||||||||| ||||||| ||||||||||  |||||||||||||||    
T  650203 tagcttatcagctaaaaactatcagctagcttatcaactatccgctattttta 650151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 6759973 - 6759914
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||| | |||||||| || ||||| || |||||||||||||||||||||||||||    
T  6759973 tatcagctacacgctatcagctaacttataagctatccgctatttttatcaaacagagcc 6759914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 4385094 - 4385040
Alignment:
Q  4 cttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaa 58  Q
    ||||||||||||||||||| || ||||||||||  ||||||||||||||| ||||    
T  4385094 cttatcagctaaaagctattagctagcttatcatctatccgctatttttaccaaa 4385040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 9052421 - 9052363
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| ||| |||||| |||||||||||| |||||||||||||| || ||||||||    
T  9052421 atcagctataagttatcagctagcttatcagtcatccgctatttttaccatacagagcc 9052363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 13111161 - 13111108
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaa 58  Q
    |||||| ||||||  |||| | ||||||||||||||||||||||||||||||||    
T  13111161 ttatcaactaaaaattatccgctagcttatcagttatccgctatttttatcaaa 13111108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 26912391 - 26912432
Alignment:
Q  22 tcagttagcttatcagttatccgctatttttatcaaacagag 63  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  26912391 tcagctagcttatcagttatccgctatttttaccaaacagag 26912432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2265565 - 2265529
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  2265565 tagcttatcagctaaaagctatcagctagcttatcag 2265529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 4452945 - 4452909
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  4452945 tagcttatcagctaaaagctatcagctagcttatcag 4452909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 5040489 - 5040525
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  5040489 tagcttatcagctaaaagctatcagctagcttatcag 5040525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 6231544 - 6231492
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    ||||| || ||||||  |||||||||||| |||||||||||||||||||||||    
T  6231544 agctataatctatcaagtagcttatcagtcatccgctatttttatcaaacaga 6231492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 8705941 - 8705905
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  8705941 tagcttatcagctaaaagctatcagctagcttatcag 8705905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 8705967 - 8705931
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  8705967 tagcttatcagctaaaagctatcagctagcttatcag 8705931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 16487603 - 16487639
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  16487603 tagcttatcagctaaaagctatcagctagcttatcag 16487639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 21865965 - 21866001
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  21865965 tagcttatcagctaaaagctatcagctagcttatcag 21866001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 28382095 - 28382059
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  28382095 tagcttatcagctaaaagctatcagctagcttatcag 28382059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 36711954 - 36711918
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  36711954 tagcttatcagctaaaagctatcagctagcttatcag 36711918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 38843582 - 38843646
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    ||||||||| || ||||||| ||||||||||| |||||||| |||||| |||||| |||| ||||    
T  38843582 tatcagctataaactatcagctagcttatcagctatccgctgtttttaccaaacaaagcctaaat 38843646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43136356 - 43136392
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  43136356 tagcttatcagctaaaagctatcagctagcttatcag 43136392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 70
Target Start/End: Complemental strand, 7212727 - 7212688
Alignment:
Q  31 ttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  7212727 ttataagttatccgctatttttaccaaacagagccaaaat 7212688  T

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Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 2046525 - 2046467
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| || |||| || |||||||||| | |||||||||||||| |||||||||||    
T  2046525 atcagctataaactataagctagcttatcaatcatccgctatttttaccaaacagagcc 2046467  T

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Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 8687765 - 8687727
Alignment:
Q  27 tagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  8687765 tagcttatcagctatccgctatttttaccaaacagagcc 8687727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 24020633 - 24020691
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| || ||||||| |||||||| || ||||| ||||||||| |||||||||||    
T  24020633 atcagctataaactatcagctagcttataagctatccactatttttaccaaacagagcc 24020691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 2758679 - 2758724
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctattttt 52  Q
    ||||| || ||||||||||||||||||| |||||||| ||||||||    
T  2758679 atcagttataagctatcagttagcttattagttatcctctattttt 2758724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 40868726 - 40868693
Alignment:
Q  32 tatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||| |||||||||||||||||||||||||||    
T  40868726 tatcagctatccgctatttttatcaaacagagcc 40868693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8340508 - 8340544
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||||||||||| || |||||||||||    
T  8340508 tagcttatcagctaaaagctataagctagcttatcag 8340544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 28382069 - 28382033
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||| |||||||||| |||||||||||    
T  28382069 tagcttatcagctataagctatcagctagcttatcag 28382033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 36711928 - 36711892
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||| |||||||||| |||||||||||    
T  36711928 tagcttatcagctataagctatcagatagcttatcag 36711892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43136330 - 43136366
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||||||||||| || |||||||||||    
T  43136330 tagcttatcagctaaaagctattagctagcttatcag 43136366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 43293461 - 43293513
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    ||||| ||||||| || ||||||||||| ||||||||| ||||| ||||||||    
T  43293461 agctataagctataagctagcttatcagctatccgctacttttaccaaacaga 43293513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 43507002 - 43506966
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||||||| |||||| |||||||||||    
T  43507002 tagcttatcagctaaaagttatcagctagcttatcag 43506966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 160; Significance: 2e-85; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 66 - 245
Target Start/End: Complemental strand, 36153437 - 36153258
Alignment:
Q  66 aaaattattttgtagtgtaagaggaaacgaaagtttaagaattgacactgacaaaaataaaagtaataataatgttaagtgaatagctgcaagtgtgaga 165  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36153437 aaaattattttgtagtgtgagaggaaatgaaagtttaagaattgacagtgacaaaaataaaagtaataataatgttaagtgaatagctgcaagtgtgaga 36153338  T
Q  166 caccctacttcccatggatcttgatgatgaatagtggatatacaatttgtagtgatgatggtgaagaacgatgaagagtg 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  36153337 caccctacttcccatggatcttgatgatgaatagtggatatacaatttgtagtgatgatagtgaagaatgatgaagagtg 36153258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 15314000 - 15314065
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  15314000 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcca 15314065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 26205054 - 26205118
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  26205054 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 26205118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 29379757 - 29379821
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  29379757 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 29379821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30780046 - 30780110
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  30780046 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 30780110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 33561265 - 33561201
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  33561265 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 33561201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 36300489 - 36300425
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  36300489 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 36300425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 39827319 - 39827383
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  39827319 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 39827383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 323595 - 323659
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| || |||||||| ||||||||||||||| |||||||||||    
T  323595 tagcttatcagctaaaagctatcagctaacttatcagctatccgctatttttaccaaacagagcc 323659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1918803 - 1918867
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||||||||| |||||||||||    
T  1918803 tagcttatcagctaaaagctatcaactagcttatcagctatccgctatttttaccaaacagagcc 1918867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3271387 - 3271451
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||| |||||||    
T  3271387 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaagcagagcc 3271451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 13121005 - 13120941
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||| |||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  13121005 tagcttatcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 13120941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 29586913 - 29586977
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  29586913 tagcttataagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 29586977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 38677145 - 38677209
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| ||||||    
T  38677145 tagcttatcagctaaaagctatcagctaacttatcagttatccgctatttttaccaaagagagcc 38677209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 40888559 - 40888623
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||| ||||||||| |||||||||||    
T  40888559 tagcttatcagctaaaagctatcagctagcttatcagctatccactatttttaccaaacagagcc 40888623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 42063671 - 42063607
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| ||||    
T  42063671 tatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcctaaat 42063607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17499286 - 17499223
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagc 64  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||  |||||||||    
T  17499286 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttactaaacagagc 17499223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29703591 - 29703527
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| ||||||||| |||||| ||||||||||| ||||||||||||||| |||||||||||    
T  29703591 tagcttataagctaaaagttatcagctagcttatcagctatccgctatttttaccaaacagagcc 29703527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 32367774 - 32367710
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||| |||||||||||||||||||| || |||||||| ||||||||||||||| |||||||||||    
T  32367774 tagcctatcagctaaaagctatcagctaacttatcagctatccgctatttttaccaaacagagcc 32367710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 41150632 - 41150568
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||| ||||||| || |||||||| ||||||||||||||| |||||||||||    
T  41150632 tagcttatcagctaaaaactatcagctaacttatcagctatccgctatttttaccaaacagagcc 41150568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 36838082 - 36838023
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||||    
T  36838082 tatcagctaaaagctaccagctagcttatcagctatccgctatttttaccaaacagagcc 36838023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 44910582 - 44910641
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| ||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  44910582 tatcagctcaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 44910641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 46928269 - 46928211
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaa 68  Q
    ||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| ||||    
T  46928269 agctataagctatcagttagcttatcagtcatcctctatttttatcaaacagagtcaaa 46928211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 30721053 - 30720993
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||| ||||||||||| ||||| || |||||| |||||||||||    
T  30721053 ttatcagctaaaagctatcagctagcttatcagctatccactgtttttaccaaacagagcc 30720993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34320126 - 34320178
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctattttta 53  Q
    ||||||||||||||||||||||||| |||||||| || |||||||||||||||    
T  34320126 tagcttatcagctaaaagctatcagctagcttataagctatccgctattttta 34320178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 6814901 - 6814960
Alignment:
Q  16 aagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaattattt 75  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||| ||  ||||||||    
T  6814901 aagctatcagctagcttatcagtcatccgctatttttatcaaacagaaccttaattattt 6814960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 33152697 - 33152756
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||| || ||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  33152697 tatcagctataaactatcagctagcttatcagctatccgctatttttatcaaatagagcc 33152756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 33525254 - 33525309
Alignment:
Q  4 cttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaac 59  Q
    ||||||||||| |||||||||| || ||||||||||||||| ||||||||||||||    
T  33525254 cttatcagctataagctatcagctatcttatcagttatccgttatttttatcaaac 33525309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 26844479 - 26844529
Alignment:
Q  4 cttatcagctaaaagctatcagttagcttatcagttatccgctatttttat 54  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||||    
T  26844479 cttatcagctaaaagctatcagctaacttatcagctatccgctatttttat 26844529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 38966872 - 38966826
Alignment:
Q  22 tcagttagcttatcagttatccgctatttttatcaaacagagccaaa 68  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||    
T  38966872 tcagttagcttatcagctatccgctatttttaccaaacagagccaaa 38966826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 7710356 - 7710307
Alignment:
Q  20 tatcagttagcttatcagttatccgctatttttatcaaacagagccaaaa 69  Q
    |||||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  7710356 tatcagctagcttatcagctatccgctatttttaccaaacagagccaaaa 7710307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 7025678 - 7025734
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagag 63  Q
    |||||||| |||||||||| |||||||||||| |||||||||||||| |||| ||||    
T  7025678 atcagctataagctatcagctagcttatcagtcatccgctatttttaccaaagagag 7025734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 47133947 - 47133895
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctattttta 53  Q
    |||||||||||||| |||||||||| ||||||||||| |||||||| ||||||    
T  47133947 tagcttatcagctataagctatcagctagcttatcagctatccgctgttttta 47133895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 3661485 - 3661543
Alignment:
Q  4 cttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    |||||||||||||||||||||| || |||||||  ||||||||||||||| || |||||    
T  3661485 cttatcagctaaaagctatcagctaacttatcaactatccgctatttttaccagacaga 3661543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 25135757 - 25135807
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaaca 60  Q
    ||||| |||||||||||||| |||| |||||||||||||||||| ||||||    
T  25135757 agctataagctatcagttagtttataagttatccgctatttttaccaaaca 25135807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 34319296 - 34319354
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| |||||||||| || ||||| || ||||||||||||||| |||||||||||    
T  34319296 atcagctataagctatcagctaacttataagctatccgctatttttaccaaacagagcc 34319354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 37671535 - 37671485
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaaca 60  Q
    ||||| |||||||||| |||||||||||| |||||||||||||| ||||||    
T  37671535 agctataagctatcagctagcttatcagtcatccgctatttttaccaaaca 37671485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 37704614 - 37704664
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaaca 60  Q
    ||||| |||||||||| |||||||||||| |||||||||||||| ||||||    
T  37704614 agctataagctatcagctagcttatcagtcatccgctatttttaccaaaca 37704664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 40720240 - 40720298
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| |||||||||| |||||||||||| ||||| ||||| || |||||||||||    
T  40720240 atcagctataagctatcagctagcttatcagtcatccgttatttctaccaaacagagcc 40720298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 42613491 - 42613445
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctattttta 53  Q
    |||||||| |||||||||| |||||||||||| ||||||||||||||    
T  42613491 atcagctataagctatcagctagcttatcagtcatccgctattttta 42613445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 19898287 - 19898242
Alignment:
Q  20 tatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||| ||||||||||| ||||||||||||||| |||||||||||    
T  19898287 tatcagctagcttatcagctatccgctatttttaccaaacagagcc 19898242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 34087760 - 34087808
Alignment:
Q  16 aagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  34087760 aagctatcagctagcttat-agttatccgctatttttaccaaacagagcc 34087808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 1918751 - 1918787
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  1918751 tagcttatcagctaaaagctatcagctagcttatcag 1918787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 9169750 - 9169790
Alignment:
Q  22 tcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  9169750 tcagttagcttatcagctatccgctatttttaccaaacaga 9169790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 15313974 - 15314010
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  15313974 tagcttatcagctaaaagctatcagctagcttatcag 15314010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 26205002 - 26205038
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  26205002 tagcttatcagctaaaagctatcagctagcttatcag 26205038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 29379679 - 29379715
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  29379679 tagcttatcagctaaaagctatcagctagcttatcag 29379715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 29379705 - 29379741
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  29379705 tagcttatcagctaaaagctatcagctagcttatcag 29379741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 36300515 - 36300479
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  36300515 tagcttatcagctaaaagctatcagctagcttatcag 36300479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 25602681 - 25602724
Alignment:
Q  22 tcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||| ||||||||||||||| |||||| ||||    
T  25602681 tcagttagcttatcagctatccgctatttttagcaaacacagcc 25602724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 47133968 - 47133937
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||||||||||    
T  47133968 tatcagctaaaagctatcagttagcttatcag 47133937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 7780547 - 7780489
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| |||||||||| |||||||| |  |||||| |||||||| |||||||||||    
T  7780547 atcagctataagctatcagctagcttataaactatccgttatttttaccaaacagagcc 7780489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 9769122 - 9769064
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagc 64  Q
    ||||||||| || |||||||| ||||||| || ||| ||||||||||| ||||||||||    
T  9769122 tatcagctataaactatcagtcagcttataagctattcgctatttttaccaaacagagc 9769064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 15349676 - 15349718
Alignment:
Q  16 aagctatcagttagcttatcagttatccgctatttttatcaaa 58  Q
    |||||||||| |||||||||||| |||||||||||||| ||||    
T  15349676 aagctatcagctagcttatcagtcatccgctatttttaccaaa 15349718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 44718337 - 44718299
Alignment:
Q  27 tagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  44718337 tagcttatcaattattcgctatttttatcaaacagagcc 44718299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 49184512 - 49184462
Alignment:
Q  17 agctatcagttagcttatcagttatccgctatttttatcaaacagagccaa 67  Q
    ||||||||| ||||| |||||| |||||||| ||||| |||||||||||||    
T  49184512 agctatcagctagctcatcagtcatccgctaattttaccaaacagagccaa 49184462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 9768598 - 9768553
Alignment:
Q  19 ctatcagttagcttatcagttatccgctatttttatcaaacagagc 64  Q
    |||||||| ||||||| || ||||||||||||||| ||||||||||    
T  9768598 ctatcagtcagcttataagctatccgctatttttaccaaacagagc 9768553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 10721572 - 10721523
Alignment:
Q  16 aagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||| |||||| |||| |||||||| |||||| |||||||||||    
T  10721572 aagctatcagctagcttttcaggtatccgctttttttaccaaacagagcc 10721523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 17047463 - 17047504
Alignment:
Q  20 tatcagttagcttatcagttatccgctatttttatcaaacag 61  Q
    |||||| || |||||||| |||||||||||||||||||||||    
T  17047463 tatcagctaacttatcagctatccgctatttttatcaaacag 17047504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 47049450 - 47049401
Alignment:
Q  16 aagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||| |||||| |||| |||||||| |||||| |||||||||||    
T  47049450 aagctatcagctagcttttcaggtatccgctttttttaccaaacagagcc 47049401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 1918777 - 1918813
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||| |||||||||| |||||||||||    
T  1918777 tagcttatcagctataagctatcagctagcttatcag 1918813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 23710735 - 23710771
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| || ||||||||    
T  23710735 tagcttatcagctaaaagctatcagctaacttatcag 23710771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 26205028 - 26205064
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||| |||||||||| |||||||||||    
T  26205028 tagcttatcagctataagctatcagctagcttatcag 26205064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 29379731 - 29379767
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||| |||||||||| |||||||||||    
T  29379731 tagcttatcagctataagctatcagctagcttatcag 29379767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 32367800 - 32367764
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  32367800 tagcttatcagctaaaagctatcagctagcctatcag 32367764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 33561291 - 33561255
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||| |||||||||||||||| |||||||||||    
T  33561291 tagcttataagctaaaagctatcagctagcttatcag 33561255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 40934870 - 40934838
Alignment:
Q  32 tatcagttatccgctatttttatcaaacagagc 64  Q
    |||||| ||||||||||||||||||||||||||    
T  40934870 tatcagctatccgctatttttatcaaacagagc 40934838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 2e-76; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 66 - 245
Target Start/End: Original strand, 43785754 - 43785931
Alignment:
Q  66 aaaattattttgtagtgtaagaggaaacgaaagtttaagaattgacactgacaaaaataaaagtaataataatgttaagtgaatagctgcaagtgtgaga 165  Q
    |||||||||||||||||| |||||||| ||||||||||||||| ||| |||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  43785754 aaaattattttgtagtgtgagaggaaatgaaagtttaagaattaacagtgacaaa--taaaagtaataataatgttaagtgaatagctgcaagtgtgaga 43785851  T
Q  166 caccctacttcccatggatcttgatgatgaatagtggatatacaatttgtagtgatgatggtgaagaacgatgaagagtg 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  43785852 caccctacttcccatggatcttgatgatgaatagtggatatacaatttgtagtgatgatagtgaagaatgatgaagagtg 43785931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 19947722 - 19947658
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  19947722 tagcttatcagctaaaagctatcagctagcttatcagttatccgctatttttaccaaacagagcc 19947658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 37089011 - 37089075
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  37089011 tagcttatcagctaaaagctatcagttagcttatcagctatccgctatttttaccaaacagagcc 37089075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 2579405 - 2579341
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  2579405 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 2579341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29717630 - 29717566
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  29717630 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 29717566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 37528149 - 37528085
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  37528149 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 37528085  T

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Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 40562741 - 40562677
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  40562741 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 40562677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29080683 - 29080619
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||| |||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  29080683 tagcttatcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 29080619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 33392435 - 33392499
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||||||||||| |||||||||||    
T  33392435 tagcttatcagctaaaagctatctgctagcttatcagctatccgctatttttaccaaacagagcc 33392499  T

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Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 44846346 - 44846405
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaaca 60  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  44846346 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaaca 44846405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 35500383 - 35500445
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagag 63  Q
    |||||||||||||| |||||||||| ||||||||||| ||||||||||||||| |||||||||    
T  35500383 tagcttatcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagag 35500445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21707841 - 21707902
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    |||||||||||||| |||||||||| ||||||||||| ||||||||||||||| ||||||||    
T  21707841 tagcttatcagctataagctatcagctagcttatcagctatccgctatttttaccaaacaga 21707902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 52858649 - 52858710
Alignment:
Q  4 cttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||| |||||||||||    
T  52858649 cttatcagctaaaagctatcagctaacttatcagctatccgctatttttaccaaacagagcc 52858710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 55227187 - 55227126
Alignment:
Q  4 cttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  55227187 cttatcagttaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 55227126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 38186518 - 38186577
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||| |||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  38186518 tatcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 38186577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 46972789 - 46972848
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||||||| |||||||| || ||||||||||||||| |||||||||||    
T  46972789 tatcagctaaaagctatcagctagcttataagctatccgctatttttaccaaacagagcc 46972848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 52165473 - 52165414
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||| ||||||||||||||||| || ||||||||||||||| |||||||||||    
T  52165473 tatcagctaaacgctatcagttagcttataagctatccgctatttttaccaaacagagcc 52165414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 2852653 - 2852711
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| ||||||| |||||||||||||| ||||||||||||||| |||||||||||    
T  2852653 atcagctataagctataagttagcttatcagctatccgctatttttaccaaacagagcc 2852711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25571131 - 25571196
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    |||||||| |||||||||||||||| ||||||||||| |||||| |||||||| |||||| |||||    
T  25571131 tagcttataagctaaaagctatcagctagcttatcagctatccgttatttttaccaaacatagcca 25571196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4241034 - 4241086
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctattttta 53  Q
    ||||||||||||||||||||||||| ||||||||||| |||||| ||||||||    
T  4241034 tagcttatcagctaaaagctatcagctagcttatcagctatccgttattttta 4241086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 47897027 - 47896957
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatc-aaacagagccaaaat 70  Q
    |||||||||| |||||||||||||| || |||||||| ||||| ||||||||| | |||||||||||||||    
T  47897027 tagcttatcaactaaaagctatcagctaacttatcagctatccactatttttaccaaaacagagccaaaat 47896957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 40479451 - 40479406
Alignment:
Q  20 tatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||    
T  40479451 tatcagttagcttatcagctatccgctatttttaccaaacagagcc 40479406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 14338385 - 14338321
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    |||| |||| |||||||||| |||||||||| ||||||||||| |||| |||||||| |||||||    
T  14338385 tatccgctataagctatcaggtagcttatcaattatccgctatatttaccaaacagaaccaaaat 14338321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 48943329 - 48943385
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacag 61  Q
    ||||||||||||| ||||||| ||| ||||||| ||||||||||||||| |||||||    
T  48943329 ttatcagctaaaaactatcagctagtttatcagctatccgctatttttaccaaacag 48943385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 42463428 - 42463373
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||| |||||||||| |||||||||| | |||||||||||||| |||||||||||    
T  42463428 agctataagctatcaggtagcttatcaatcatccgctatttttaccaaacagagcc 42463373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 43526480 - 43526539
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||| ||||||||||||| || |||||||  ||||||||||||||| |||||||||||    
T  43526480 tatcagttaaaagctatcagctaacttatcaactatccgctatttttaccaaacagagcc 43526539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 52226119 - 52226174
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    |||||||| || ||||||| |||||||||||| |||||||||||||| ||||||||    
T  52226119 atcagctataaactatcagctagcttatcagtcatccgctatttttaccaaacaga 52226174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 54671613 - 54671570
Alignment:
Q  22 tcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||| ||||||||||||||| |||||||||||    
T  54671613 tcagttagcttatcagctatccgctatttttaccaaacagagcc 54671570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 45369653 - 45369711
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagc 64  Q
    ||||| ||| |||||||||| || |||||||| ||||||||||||||| ||||||||||    
T  45369653 tatcaactataagctatcagctaacttatcagctatccgctatttttaccaaacagagc 45369711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 46318056 - 46318006
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaaca 60  Q
    ||||| |||||||||| |||||||||||| |||||||||||||| ||||||    
T  46318056 agctataagctatcagctagcttatcagtcatccgctatttttaccaaaca 46318006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 35101023 - 35101084
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    |||| ||||| |||||||||| || ||||||||| |||| ||||||||| ||||||||||||    
T  35101023 ttataagctataagctatcagctaccttatcagtcatccactatttttaccaaacagagcca 35101084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 892746 - 892790
Alignment:
Q  22 tcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    |||||||||||||||| ||||||||||||||| | ||||||||||    
T  892746 tcagttagcttatcagctatccgctatttttaccgaacagagcca 892790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 29080709 - 29080673
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  29080709 tagcttatcagctaaaagctatcagctagcttatcag 29080673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 32025633 - 32025581
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    ||||| |||||||||| |||||||| || ||||||||||||||| ||||||||    
T  32025633 agctataagctatcagctagcttataagctatccgctatttttaccaaacaga 32025581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 35500331 - 35500367
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  35500331 tagcttatcagctaaaagctatcagctagcttatcag 35500367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 40562793 - 40562757
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  40562793 tagcttatcagctaaaagctatcagctagcttatcag 40562757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 44545948 - 44546000
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctattttta 53  Q
    |||||||||| |||||||||||||| || |||||||| |||||||| ||||||    
T  44545948 tagcttatcacctaaaagctatcagctaacttatcagctatccgctgttttta 44546000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 46247197 - 46247161
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  46247197 tagcttatcagctaaaagctatcagctagcttatcag 46247161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 48378707 - 48378759
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctattttta 53  Q
    |||||||||||||| || ||||||  |||||||||||| ||||||||||||||    
T  48378707 tagcttatcagctataaactatcaactagcttatcagtcatccgctattttta 48378759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 52594725 - 52594677
Alignment:
Q  17 agctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||| || ||||| |||||||||||||||||| |||||||||||    
T  52594725 agctatcagctaacttataagttatccgctatttttaccaaacagagcc 52594677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 52867566 - 52867514
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    ||||| |||||||||| |||||||| || ||||||||||||||| ||||||||    
T  52867566 agctataagctatcagctagcttataagctatccgctatttttaccaaacaga 52867514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 28676358 - 28676315
Alignment:
Q  22 tcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||    
T  28676358 tcagttagcttatcagctatccgctagttttaccaaacagagcc 28676315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 30813611 - 30813568
Alignment:
Q  21 atcagttagcttatcagttatccgctatttttatcaaacagagc 64  Q
    ||||| |||||||||||| |||||||||||||| ||||||||||    
T  30813611 atcagctagcttatcagtcatccgctatttttaccaaacagagc 30813568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 41519301 - 41519360
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||| ||||||| || ||||||||||| |||||| | |||||| |||||||||||    
T  41519301 tatcagctataagctataagctagcttatcagctatccgttttttttaccaaacagagcc 41519360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 42497828 - 42497867
Alignment:
Q  21 atcagttagcttatcagttatccgctatttttatcaaaca 60  Q
    ||||| |||||||||||| |||||||||||||||||||||    
T  42497828 atcagctagcttatcagtcatccgctatttttatcaaaca 42497867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 194162 - 194220
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||  |||||| || ||||||||||| | ||||||||||||| |||||||||||    
T  194162 atcagctatcagctataagctagcttatcagctgtccgctatttttaccaaacagagcc 194220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 12063080 - 12063018
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcagttatccgctattttt-atcaaacagagcca 66  Q
    |||||||||| ||||||||| |||| |||||| |||||||  |||||| ||||||||||||||    
T  12063080 ttatcagctataagctatcaattagtttatcaattatccgtcattttttatcaaacagagcca 12063018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 44748237 - 44748203
Alignment:
Q  32 tatcagttatccgctatttttatcaaacagagcca 66  Q
    |||||| ||||||||||||||||||||||||||||    
T  44748237 tatcagctatccgctatttttatcaaacagagcca 44748203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 50316546 - 50316504
Alignment:
Q  22 tcagttagcttatcagttatccgctatttttatcaaacagagc 64  Q
    |||||||||||||||| |||| |||||||||| ||||||||||    
T  50316546 tcagttagcttatcagctatctgctatttttaccaaacagagc 50316504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 38891412 - 38891367
Alignment:
Q  20 tatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||| || |||||||| ||||||||||||||| |||||||||||    
T  38891412 tatcagctaacttatcagctatccgctatttttaccaaacagagcc 38891367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 45344426 - 45344381
Alignment:
Q  20 tatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||| || |||||||| ||||||||||||||| |||||||||||    
T  45344426 tatcagctaacttatcagctatccgctatttttaccaaacagagcc 45344381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2579431 - 2579395
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||| |||||||||| |||||||||||    
T  2579431 tagcttatcagctataagctatcagctagcttatcag 2579395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 19947748 - 19947712
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||| |||||||||| |||||||||||    
T  19947748 tagcttatcagctataagctatcagctagcttatcag 19947712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 32839553 - 32839589
Alignment:
Q  27 tagcttatcagttatccgctatttttatcaaacagag 63  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  32839553 tagcttatcggttatccgctatttttaccaaacagag 32839589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 35500357 - 35500393
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||| |||||||||| |||||||||||    
T  35500357 tagcttatcagctataagctatcagctagcttatcag 35500393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 40562767 - 40562731
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||| |||||||||| |||||||||||    
T  40562767 tagcttatcagctataagctatcagctagcttatcag 40562731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 40932272 - 40932224
Alignment:
Q  16 aagctatcagttagcttatcagttatccgctatttttatcaaacagagc 64  Q
    |||||||||| ||| |||||||| ||||||||||||||  |||||||||    
T  40932272 aagctatcagctagtttatcagtcatccgctatttttacaaaacagagc 40932224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 41247054 - 41247102
Alignment:
Q  16 aagctatcagttagcttatcagttatccgctatttttatcaaacagagc 64  Q
    |||||||||| |||||||| ||| |||||||||||||| ||||| ||||    
T  41247054 aagctatcagctagcttattagtcatccgctatttttaccaaactgagc 41247102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 51709816 - 51709864
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcagttatccgctattttta 53  Q
    |||| ||||| |||||||||| || ||||||||| ||||||||||||||    
T  51709816 ttataagctataagctatcagctaacttatcagtcatccgctattttta 51709864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 45520169 - 45520233
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  45520169 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttaccaaacagagcc 45520233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 29414245 - 29414320
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaattatttt 76  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||| |||||    
T  29414245 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagccaaaataatttt 29414320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7707120 - 7707193
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaattatt 74  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| ||||||||    
T  7707120 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcctaaattatt 7707193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25198730 - 25198665
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  25198730 tagcttatcagctaaaagctatcagttaacttatcagctatccgctatttttatcaaacagagcca 25198665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 27397164 - 27397096
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaa 69  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  27397164 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagccaaaa 27397096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4516578 - 4516514
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||    
T  4516578 tagcttatcagctaaaagctatcagctagcttatcagttatccgttatttttaccaaacagagcc 4516514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21370548 - 21370612
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  21370548 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 21370612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 39086984 - 39086920
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||    
T  39086984 tagcttatcagctaaaagctatcaactagcttatcagctatccgctatttttatcaaacagagcc 39086920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 55495281 - 55495217
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  55495281 tagcttataagctaaaagctatcagctagcttatcagctatccgctatttttatcaaacagagcc 55495217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 56373191 - 56373255
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  56373191 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 56373255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18583572 - 18583637
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    |||||||| ||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  18583572 tagcttataagctaaaagctatcagttaacttatcagctatccgctatttttaccaaacagagcca 18583637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 43225123 - 43225058
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| ||||    
T  43225123 ttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcctaaat 43225058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 45906881 - 45906946
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    |||||||||||||| |||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  45906881 tagcttatcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagcca 45906946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 46896024 - 46896089
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||| ||||    
T  46896024 ttatcagctaaaagctatcagctaacttatcagttatccgctatttttaccaaacagagcccaaat 46896089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 4392127 - 4392063
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| ||||    
T  4392127 tatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcctaaat 4392063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 9043021 - 9042957
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||| |||||||||| ||||| ||||||||||||||||||||| |||||||||||    
T  9043021 tagcttatcagctataagctatcagctagctaatcagttatccgctatttttaccaaacagagcc 9042957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 11151330 - 11151266
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  11151330 tagcttataagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 11151266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 27185034 - 27184970
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  27185034 tagcttataagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 27184970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 37114701 - 37114637
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| |||| |||||||||| |||||||||||    
T  37114701 tagcttatcagctaaaagctatcagctagcttatcagctatctgctatttttaccaaacagagcc 37114637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 53407902 - 53407966
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||| |||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  53407902 tagcttatcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 53407966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 56269478 - 56269414
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||| |||||||||||    
T  56269478 tagcttatcagctaaaagctatcagctagcttataagctatccgctatttttaccaaacagagcc 56269414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 22037754 - 22037695
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  22037754 tatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 22037695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 45780165 - 45780106
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  45780165 tatcagctataagctatcagctagcttatcagttatccgctatttttaccaaacagagcc 45780106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 44433257 - 44433319
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagag 63  Q
    |||||||||||||| ||||||||||||||||||| || ||||||||||||||| |||||||||    
T  44433257 tagcttatcagctataagctatcagttagcttataagctatccgctatttttaccaaacagag 44433319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 8942625 - 8942686
Alignment:
Q  4 cttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  8942625 cttatcagttaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 8942686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 11601419 - 11601484
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    |||||||| ||||||||| |||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  11601419 tagcttataagctaaaagttatcagctagcttatcagctatccgctatttttaccaaacagagcca 11601484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 55855913 - 55855848
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    |||||||||||||||||| |||||||||||||||||| |||||| |||||||| |||| |||||||    
T  55855913 tagcttatcagctaaaagttatcagttagcttatcagctatccgttatttttaccaaatagagcca 55855848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 15636482 - 15636544
Alignment:
Q  4 cttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    |||||||||||||||||||||| || ||||| ||||||||| |||||||| ||||||||||||    
T  15636482 cttatcagctaaaagctatcagctaacttataagttatccgttatttttaccaaacagagcca 15636544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 33116812 - 33116874
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagag 63  Q
    ||||||||||| ||||| ||||||| ||||||||||| ||||||||||||||| |||||||||    
T  33116812 tagcttatcagttaaaaactatcagctagcttatcagctatccgctatttttaccaaacagag 33116874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 8829199 - 8829138
Alignment:
Q  4 cttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||| ||||||||||| |||||||| || ||||||||||||||| |||||||||||    
T  8829199 cttatcagctgaaagctatcagctagcttattagctatccgctatttttaccaaacagagcc 8829138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 37832727 - 37832780
Alignment:
Q  17 agctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||    
T  37832727 agctatcagctagcttatcagttatccgctatttttaccaaacagagcctaaat 37832780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 53275419 - 53275476
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaa 58  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||||| ||||    
T  53275419 tagcttatcagctaaaagctatcaactaacttatcagttatccgctatttttaccaaa 53275476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 31679598 - 31679662
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||| |||| || || |||||||| ||||||||||||||| |||||||||||    
T  31679598 tagcttatcagctaaaaactattagctaacttatcagctatccgctatttttaccaaacagagcc 31679662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 35842197 - 35842133
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||| |||||||||| || ||||||||| ||| |||||||||| |||||||||||    
T  35842197 tagcttatcagctataagctatcagctaacttatcagtcatctgctatttttaccaaacagagcc 35842133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 52670721 - 52670785
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||| ||||||||||||||||||| ||   |||||||||| |||||||||||    
T  52670721 tagcttatcagctaaaaactatcagttagcttatcagctaaaagctatttttaccaaacagagcc 52670785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 5460138 - 5460079
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||| |||||||||| |||||||| || ||||||||||||||| |||||||||||    
T  5460138 tatcagctataagctatcagctagcttataagctatccgctatttttaccaaacagagcc 5460079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 12233374 - 12233311
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagc 64  Q
    |||||||||||||| |||||||||| ||||||||||  |||||||||||||||  |||||||||    
T  12233374 tagcttatcagctataagctatcagctagcttatcaactatccgctatttttactaaacagagc 12233311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 43780203 - 43780144
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagc 64  Q
    |||||||||| ||||||| || |||||||||||| |||||||||||||| ||||||||||    
T  43780203 ttatcagctataagctataagctagcttatcagtcatccgctatttttaccaaacagagc 43780144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 50503260 - 50503315
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||||| ||||||||    
T  50503260 atcagctataagctatcagctagcttatcagctatccgctatttttaccaaacaga 50503315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 28307937 - 28307995
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagag 63  Q
    ||||||||||||||||| ||| || |||||||| ||||||||||||||| |||||||||    
T  28307937 ttatcagctaaaagctaccagctaccttatcagctatccgctatttttaccaaacagag 28307995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4938760 - 4938695
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    |||||||| |||||||| | ||||| || |||||||| ||||||||||||||| ||||||||||||    
T  4938760 tagcttattagctaaaaaccatcagctaacttatcagctatccgctatttttaccaaacagagcca 4938695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 33004485 - 33004420
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    |||||||| |||||||| | ||||| || |||||||| ||||||||||||||| ||||||||||||    
T  33004485 tagcttattagctaaaaaccatcagctaacttatcagctatccgctatttttaccaaacagagcca 33004420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 40496831 - 40496774
Alignment:
Q  8 tcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||| |||||||||| ||||||||||| || |||||||||||| |||||||||||    
T  40496831 tcagctataagctatcagctagcttatcagctaaccgctatttttaccaaacagagcc 40496774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 25439898 - 25439854
Alignment:
Q  22 tcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||    
T  25439898 tcagttagcttatcagctatccgctatttttaccaaacagagcca 25439854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 33510120 - 33510180
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaa 67  Q
    |||||||| |||||||||| |||||||||||| ||||| ||||||||  ||||||||||||    
T  33510120 atcagctataagctatcagctagcttatcagtcatccgttatttttacaaaacagagccaa 33510180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 37971053 - 37971113
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    |||||||||||||||||||  || |||||||| ||||||||||||||| |||||| |||||    
T  37971053 tatcagctaaaagctatcaactaacttatcagctatccgctatttttaccaaacaaagcca 37971113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 4390832 - 4390777
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||| |||||||||| ||||||||||  ||||||||||||||| |||||||||||    
T  4390832 agctataagctatcagctagcttatcaactatccgctatttttaccaaacagagcc 4390777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 35776819 - 35776760
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaaca 60  Q
    |||||||||||||||||| ||||||||| |||||||  |||| |||||||||| ||||||    
T  35776819 tagcttatcagctaaaagttatcagttaacttatcaactatctgctatttttaccaaaca 35776760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 42117608 - 42117651
Alignment:
Q  22 tcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||| ||||||||||||||| |||||||||||    
T  42117608 tcagttagcttatcagctatccgctatttttaccaaacagagcc 42117651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29664644 - 29664712
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag-------ttatccgctatttttatcaaacaga 62  Q
    |||||||| ||||||||||||||||||||||||||||       |||||||||||||||| ||||||||    
T  29664644 tagcttataagctaaaagctatcagttagcttatcagctaaaaattatccgctatttttaccaaacaga 29664712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 49551731 - 49551789
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| |||||||||| || ||||| ||||||||||||||||||  ||||||||||    
T  49551731 atcagctataagctatcagctaacttataagttatccgctatttttactaaacagagcc 49551789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 51010497 - 51010447
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttt 51  Q
    |||||||||||||| |||||||||| ||||||||||| ||||| |||||||    
T  51010497 tagcttatcagctataagctatcagctagcttatcagctatccactatttt 51010447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 26827245 - 26827306
Alignment:
Q  4 cttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| ||||| ||||||| || |||||||| ||||||||||||||| |||| ||||||    
T  26827245 cttatcagttaaaaactatcagctaacttatcagctatccgctatttttaccaaagagagcc 26827306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 30561486 - 30561429
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagag 63  Q
    ||||| ||| ||||||| || ||||||||||| ||||||||||||||| |||||||||    
T  30561486 tatcaactataagctataagctagcttatcagctatccgctatttttaccaaacagag 30561429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 37338641 - 37338690
Alignment:
Q  17 agctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    ||||||||| ||||||||||||||||||  ||||||| ||||||||||||    
T  37338641 agctatcagctagcttatcagttatccgtcatttttaccaaacagagcca 37338690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 43077508 - 43077439
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaattattttgta 79  Q
    ||||| |||||| ||| |||||||||||| |||| ||||||||| |||||||||||| | ||||| ||||    
T  43077508 agctataagctaccagctagcttatcagtcatccactatttttaccaaacagagccatatttattgtgta 43077439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 53225046 - 53225103
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagc 64  Q
    |||||||| |||||||||| || ||||||| | ||||||||||||||||||| |||||    
T  53225046 atcagctataagctatcagctaacttatcaatcatccgctatttttatcaaatagagc 53225103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 4938812 - 4938776
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  4938812 tagcttatcagctaaaagctatcagctagcttatcag 4938776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 15015359 - 15015403
Alignment:
Q  21 atcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||| |||||||| |||||||||||||||||| |||||||||||    
T  15015359 atcagctagcttataagttatccgctatttttaccaaacagagcc 15015403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 17716446 - 17716502
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    ||||| |||||||||| || ||||| | |||||||||||||||| ||||||||||||    
T  17716446 agctataagctatcagctaccttataaattatccgctatttttaccaaacagagcca 17716502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 33004537 - 33004501
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  33004537 tagcttatcagctaaaagctatcagctagcttatcag 33004501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 48056144 - 48056096
Alignment:
Q  17 agctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||| ||||||||||||||||||||||||| | |||||| ||||    
T  48056144 agctatcagctagcttatcagttatccgctattttgaccaaacatagcc 48056096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 42123913 - 42123870
Alignment:
Q  22 tcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||| ||||||||||||||| |||||| ||||    
T  42123913 tcagttagcttatcagctatccgctatttttaccaaacaaagcc 42123870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 22431554 - 22431600
Alignment:
Q  19 ctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||| |||||||| || ||||||||||||||| |||||||||||    
T  22431554 ctatcagctagcttataagctatccgctatttttaccaaacagagcc 22431600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 22893277 - 22893347
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaattatttt 76  Q
    |||||||||||||||||| | || ||| | || ||||||||||||||| |||||||| ||| | |||||||    
T  22893277 tatcagctaaaagctatcggctaacttctaagctatccgctatttttaccaaacagaaccatagttatttt 22893347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 22944945 - 22945015
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaattatttt 76  Q
    |||||||||||||||||| | || ||| | || ||||||||||||||| |||||||| ||| | |||||||    
T  22944945 tatcagctaaaagctatcggctaacttctaagctatccgctatttttaccaaacagaaccatagttatttt 22945015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 69
Target Start/End: Complemental strand, 24953550 - 24953520
Alignment:
Q  39 tatccgctatttttatcaaacagagccaaaa 69  Q
    |||||||||||||||||||||||||||||||    
T  24953550 tatccgctatttttatcaaacagagccaaaa 24953520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 36485741 - 36485688
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagag 63  Q
    ||||| ||||||| |  |||||||||||| |||||||||||||| |||||||||    
T  36485741 agctataagctataaactagcttatcagtcatccgctatttttaccaaacagag 36485688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 9031421 - 9031385
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||| |||||||||| |||||||||||    
T  9031421 tagcttatcagctataagctatcagctagcttatcag 9031385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 27397190 - 27397154
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  27397190 tagcttatcagctaaaagctaccagctagcttatcag 27397154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 29627623 - 29627563
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaa 67  Q
    |||| ||| |||||||||| || ||||||||  |||| ||||||||| |||||||||||||    
T  29627623 atcatctataagctatcagctaacttatcagccatccactatttttaccaaacagagccaa 29627563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 46895994 - 46896030
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  46895994 tagcttatcagctaaaagctatcagctagtttatcag 46896030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 47416915 - 47416875
Alignment:
Q  32 tatcagttatccgctatttttatcaaacagagccaaaatta 72  Q
    |||||| ||||||||||||||| ||||||||||| ||||||    
T  47416915 tatcagctatccgctatttttaccaaacagagccgaaatta 47416875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 21313383 - 21313316
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaa 68  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  21313383 tagcttatcagctaaaagctatcagctagcttatcaggtatccgctatttttatcaaacagagccaaa 21313316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 40636585 - 40636520
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  40636585 tagcttatcagctaaaagctatcagctagcttatcagttatccgctatttttaccaaacagagcca 40636520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 48814986 - 48815047
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48814986 tagcttatcagctaaaagctatcagctagcttatcagttatccgctatttttatcaaacaga 48815047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 43254914 - 43254979
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  43254914 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcca 43254979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 36245808 - 36245744
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  36245808 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 36245744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 42375220 - 42375156
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  42375220 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 42375156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 42586813 - 42586749
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  42586813 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 42586749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 45686288 - 45686224
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  45686288 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 45686224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 48831485 - 48831421
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  48831485 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 48831421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21254067 - 21254002
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||||||||||| ||||||||||||    
T  21254067 tagcttatcagctaaaagctatcggctagcttatcagctatccgctatttttaccaaacagagcca 21254002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34709961 - 34710022
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||    
T  34709961 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacaga 34710022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 35588329 - 35588398
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    ||||||||||||||||||||||||| || ||||||| |||||||||||||||| ||||||||||| ||||    
T  35588329 tagcttatcagctaaaagctatcagctaacttatcaattatccgctatttttaccaaacagagcctaaat 35588398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 33203064 - 33203005
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||||| |||||||||||    
T  33203064 tatcagctaaaagctatcagctagtttatcagctatccgctatttttaccaaacagagcc 33203005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10311460 - 10311396
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||  |||||||| || ||||| ||||||||| |||||||||||    
T  10311460 tagcttatcagctaaaagctatcaactagcttattagctatccactatttttaccaaacagagcc 10311396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 45221477 - 45221413
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||| |||||||||| || |||||||| | ||||||||||||| |||||||||||    
T  45221477 tagcttatcagctataagctatcagctaacttatcagctctccgctatttttaccaaacagagcc 45221413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 47470443 - 47470383
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||| |||||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||    
T  47470443 ttattagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacatagcc 47470383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 40894162 - 40894228
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaattat 73  Q
    |||||||| |||||||||  || |||||||||||||||||||||||| |||||| |||||| |||||    
T  40894162 atcagctataagctatcaactaacttatcagttatccgctatttttaccaaacatagccaatattat 40894228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 790666 - 790609
Alignment:
Q  8 tcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||| ||||||| || ||||||||||| ||||||||||||||| |||||||||||    
T  790666 tcagctataagctataagctagcttatcagctatccgctatttttaccaaacagagcc 790609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 31512008 - 31512069
Alignment:
Q  4 cttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||||||||  ||||||||||  |||| |||||||||| |||||||||||    
T  31512008 cttatcagctaaaagctatcaactagcttatcaactatctgctatttttaccaaacagagcc 31512069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 43135182 - 43135243
Alignment:
Q  4 cttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||| ||| |||| || ||||| || |||||||||||||||||||||||||||    
T  43135182 cttatcagctaaacgctgtcagctaacttataagctatccgctatttttatcaaacagagcc 43135243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 23030606 - 23030654
Alignment:
Q  17 agctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  23030606 agctatcagctagcttataagttatccgctatttttaccaaacagagcc 23030654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 32169500 - 32169564
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||   |||||||||| ||| |||||||    
T  32169500 tagcttatcagctaaaagctatcagctagcttatcagctaaaagctatttttaccaagcagagcc 32169564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 21745128 - 21745171
Alignment:
Q  22 tcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||| ||||||||||||||| |||||||||||    
T  21745128 tcagttagcttatcagctatccgctatttttaccaaacagagcc 21745171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 44745434 - 44745489
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    |||||||| || ||||||| |||||||||||| |||||||||||||| ||||||||    
T  44745434 atcagctataaactatcagctagcttatcagtaatccgctatttttagcaaacaga 44745489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 40259382 - 40259440
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagag 63  Q
    ||||||| ||||||||||||  |||||||||| ||||| |||||||||| |||||||||    
T  40259382 ttatcagttaaaagctatcaactagcttatcaattatctgctatttttaccaaacagag 40259440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 46878675 - 46878629
Alignment:
Q  17 agctatcagttagcttatcagttatccgctatttttatcaaacagag 63  Q
    ||||||||| ||||||||||| ||||||||||||||| |||||||||    
T  46878675 agctatcagctagcttatcagctatccgctatttttaccaaacagag 46878629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 482401 - 482340
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    ||||||||||||||  ||||||||| || ||||| || ||||||||||||||| ||||||||    
T  482401 tagcttatcagctatcagctatcagctaccttataagctatccgctatttttaccaaacaga 482340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 5220970 - 5220921
Alignment:
Q  21 atcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    |||||||||||||||  ||||||| |||||||| ||||||||||||||||    
T  5220970 atcagttagcttatctattatccgttatttttaccaaacagagccaaaat 5220921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17845289 - 17845353
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| ||||| |||||||||  || ||||| || ||||||||||||||| |||||||||||    
T  17845289 tagcttataagctataagctatcaactaacttataagctatccgctatttttaccaaacagagcc 17845353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 44597393 - 44597453
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    ||||||||||| |||||||| || ||||| |  ||||||||||||||| ||||||||||||    
T  44597393 tatcagctaaacgctatcagctaacttataaactatccgctatttttaccaaacagagcca 44597453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 45673124 - 45673168
Alignment:
Q  16 aagctatcagttagcttatcagttatccgctatttttatcaaaca 60  Q
    |||||||||| ||||||||||| ||||||||||||||| ||||||    
T  45673124 aagctatcagctagcttatcagatatccgctatttttaccaaaca 45673168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 47585150 - 47585206
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagag 63  Q
    |||||||| |||||||||| ||||||||||| |||||| | |||||| |||||||||    
T  47585150 atcagctataagctatcagctagcttatcagctatccgttgtttttaccaaacagag 47585206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 36610917 - 36610871
Alignment:
Q  17 agctatcagttagcttatcagttatccgctatttttatcaaacagag 63  Q
    |||||| |||||||||||||| |||||||| |||||| |||||||||    
T  36610917 agctataagttagcttatcagctatccgctgtttttaccaaacagag 36610871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 49148983 - 49149029
Alignment:
Q  16 aagctatcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    |||||||||| |||||||||||| |||| ||||||||| ||||||||    
T  49148983 aagctatcagctagcttatcagtcatccactatttttaccaaacaga 49149029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 9488165 - 9488206
Alignment:
Q  32 tatcagttatccgctatttttatcaaacagagccaaaattat 73  Q
    |||||| ||||||||||||||| ||||||||||| |||||||    
T  9488165 tatcagctatccgctatttttaccaaacagagcctaaattat 9488206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 33099759 - 33099726
Alignment:
Q  32 tatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||| ||||||||||||||||||||    
T  33099759 tatcagttatccgttatttttatcaaacagagcc 33099726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 35001673 - 35001706
Alignment:
Q  33 atcagttatccgctatttttatcaaacagagcca 66  Q
    |||| |||||||||||||||||||||||||||||    
T  35001673 atcaattatccgctatttttatcaaacagagcca 35001706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 48730280 - 48730329
Alignment:
Q  16 aagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||| ||||||||||  ||||||||||||||  |||||||||||    
T  48730280 aagctatcagctagcttatcaactatccgctatttttcccaaacagagcc 48730329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9488120 - 9488156
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||||||| |||||| |||||||||||    
T  9488120 tagcttatcagctaaaagttatcagctagcttatcag 9488156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43135153 - 43135189
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| || ||||||||    
T  43135153 tagcttatcagctaaaagctatcagctaacttatcag 43135189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43254888 - 43254924
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||| |||||||||||||||| |||||||||||    
T  43254888 tagcttataagctaaaagctatcagctagcttatcag 43254924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 45221503 - 45221467
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  45221503 tagcttatcagttaaaagctatcagctagcttatcag 45221467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 45686314 - 45686278
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||| |||||||||||||||| |||||||||||    
T  45686314 tagcttataagctaaaagctatcagctagcttatcag 45686278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 7e-24; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 36680858 - 36680794
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  36680858 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttatcaaacagagcc 36680794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 32541944 - 32542009
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  32541944 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcca 32542009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 36112242 - 36112173
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||| ||||||||||||||||    
T  36112242 tagcttatcagctaaaagctatcagctagcttattagctatccgctatttttaccaaacagagccaaaat 36112173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25024108 - 25024172
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  25024108 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 25024172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 31582476 - 31582540
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  31582476 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 31582540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 31687475 - 31687406
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    ||||||||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||||||||| ||||    
T  31687475 tagcttatcagctaaaaactatcagctagcttatcagctatccgctatttttaccaaacagagcctaaat 31687406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 10619594 - 10619658
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||  ||||||||||||||| |||||||||||    
T  10619594 tagcttatcagctaaaagctatcagctagcttatcaactatccgctatttttaccaaacagagcc 10619658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 27781852 - 27781916
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| |||||||||||||||| || |||||||||||||||||||||||| |||||||||||    
T  27781852 tagcttataagctaaaagctatcagctaacttatcagttatccgctatttttaccaaacagagcc 27781916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 44826774 - 44826710
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| || |||||||| ||||||||||||||| |||||||||||    
T  44826774 tagcttatcagctaaaagctatcagctaacttatcagctatccgctatttttaccaaacagagcc 44826710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 41314279 - 41314346
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaa 68  Q
    ||||||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||| ||||    
T  41314279 tagcttatcagctaaaagctatcagctaacttatcagctatccgctatttttaccaaacagagtcaaa 41314346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 43276176 - 43276117
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||    
T  43276176 tatcagctaaaagctatcagctaacttatcagctatccgctatttttatcaaacagagcc 43276117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 38170859 - 38170797
Alignment:
Q  3 gcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||| ||||||||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  38170859 gcttatcagttaaaagctatcagttagcttatcagctatccactatttttaccaaacagagcc 38170797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 39872008 - 39872070
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagag 63  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||||||| |||||||||    
T  39872008 tagcttataagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagag 39872070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 6339066 - 6339130
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||||||||  ||||||||||    
T  6339066 tagcttatcagctaaaagctatcagctaacttatcaattatccgctatttttactaaacagagcc 6339130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 39703032 - 39703096
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| ||||||||| |||||||||||||||||  |||| ||||||||||||||||||||||    
T  39703032 tagcttataagctaaaagttatcagttagcttatcaactatcggctatttttatcaaacagagcc 39703096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 17116273 - 17116332
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  17116273 tatcagctaaaaactatcagctagcttatcagctatccgctatttttaccaaacagagcc 17116332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 30338286 - 30338348
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagag 63  Q
    ||||||||||||||||||||||||| || |||||||| |||||| |||||||| |||||||||    
T  30338286 tagcttatcagctaaaagctatcagctaacttatcagctatccgttatttttaccaaacagag 30338348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 34394756 - 34394700
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagag 63  Q
    |||||||| ||||||||| |||||||||||||||||| ||||||||| |||||||||    
T  34394756 atcagctataagctatcaattagcttatcagttatccactatttttaccaaacagag 34394700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 37559921 - 37559862
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||||||| || ||||  ||||||||| |||||||||||    
T  37559921 tatcagctaaaagctatcagttagcttataagctatcaactatttttaccaaacagagcc 37559862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 44158008 - 44158067
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||| |||||||||| |||||||| || ||||||||||||||| |||||||||||    
T  44158008 tatcagctataagctatcagctagcttataagctatccgctatttttaccaaacagagcc 44158067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16423590 - 16423650
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    |||||||||||||||||||| |||| ||||||||||| ||||| ||||||||| ||||||||    
T  16423590 tagcttatcagctaaaagct-tcagctagcttatcagctatccactatttttaccaaacaga 16423650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 23415313 - 23415374
Alignment:
Q  4 cttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||| |||||||||||||| || |||||||| ||||||||||||||| ||| |||||||    
T  23415313 cttatcaactaaaagctatcagctaacttatcagctatccgctatttttaccaaccagagcc 23415374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 28710050 - 28710107
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    ||||||||||||||||||||| || |||||||  ||||||||||||||| ||||||||    
T  28710050 ttatcagctaaaagctatcagctaacttatcaactatccgctatttttaccaaacaga 28710107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 28717397 - 28717454
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    ||||||||||||||||||||| || |||||||  ||||||||||||||| ||||||||    
T  28717397 ttatcagctaaaagctatcagctaacttatcaactatccgctatttttaccaaacaga 28717454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 40046348 - 40046397
Alignment:
Q  16 aagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  40046348 aagctatcagctagcttataagttatccgctatttttaccaaacagagcc 40046397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17082434 - 17082498
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||| ||||||| || ||||| || ||||||| ||||||| |||||||||||    
T  17082434 tagcttatcagctaaaaactatcagctaacttataagctatccgcaatttttaccaaacagagcc 17082498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 1893272 - 1893229
Alignment:
Q  22 tcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||| ||||||||||||||| |||||||||||    
T  1893272 tcagttagcttatcagctatccgctatttttaccaaacagagcc 1893229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 2641803 - 2641744
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||| ||||||||||||||||| || ||||| ||||||||| |||||| ||||    
T  2641803 tatcagctaaacgctatcagttagcttataagctatccactatttttaccaaacaaagcc 2641744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 41693415 - 41693372
Alignment:
Q  22 tcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||| ||||||||||||||| |||||||||||    
T  41693415 tcagttagcttatcagctatccgctatttttaccaaacagagcc 41693372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 37961067 - 37961113
Alignment:
Q  19 ctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||    
T  37961067 ctattagttagcttatcagttatccgctatttttaccaatcagagcc 37961113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 16832579 - 16832628
Alignment:
Q  16 aagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||| |||||||||||| ||||| ||||||||||||| ||||||    
T  16832579 aagctatcagctagcttatcagtcatccgttatttttatcaaatagagcc 16832628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 37586624 - 37586563
Alignment:
Q  4 cttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||| ||||||  ||||||||||| ||| ||||||||||| |||||| ||||    
T  37586624 cttatcagctaaaaactatcaactagcttatcagctattcgctatttttaccaaacaaagcc 37586563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17116228 - 17116264
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  17116228 tagcttatcagctaaaagctatcagctagcttatcag 17116264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 30338260 - 30338296
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  30338260 tagcttatcagctaaaagctatcagctagcttatcag 30338296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 31582424 - 31582460
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  31582424 tagcttatcagctaaaagctatcagctagcttatcag 31582460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 36112268 - 36112232
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  36112268 tagcttatcagctaaaagctatcagctagcttatcag 36112232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 44826814 - 44826778
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  44826814 tagcttatcagctaaaagctatcagctagcttatcag 44826778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 8271638 - 8271693
Alignment:
Q  20 tatcagttagcttatcagttatccgctatttttatcaaacagagccaaaattattt 75  Q
    |||||| ||||||||||| ||||||||||||| | |||||||||||| ||| ||||    
T  8271638 tatcagctagcttatcagctatccgctattttcaccaaacagagccataatcattt 8271693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 8435867 - 8435812
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||| ||| ||| || ||||||||||| ||||||||||||||| |||||||||||    
T  8435867 agctataagttataagctagcttatcagctatccgctatttttaccaaacagagcc 8435812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 42142153 - 42142119
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatc 35  Q
    ||||||||||||||||||||||||| |||||||||    
T  42142153 tagcttatcagctaaaagctatcagctagcttatc 42142119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 7379888 - 7379921
Alignment:
Q  32 tatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||| |||||||||||||||||||||||||||    
T  7379888 tatcagctatccgctatttttatcaaacagagcc 7379921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 13970726 - 13970775
Alignment:
Q  16 aagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||| || ||||| || ||||||||||||||| |||||||||||    
T  13970726 aagctatcagctaacttataagctatccgctatttttaccaaacagagcc 13970775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 15278542 - 15278493
Alignment:
Q  16 aagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||| || ||||||| | |||||||||||||| |||||||||||    
T  15278542 aagctatcagctaacttatcaataatccgctatttttaccaaacagagcc 15278493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 15458911 - 15458862
Alignment:
Q  16 aagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||| || ||||||| | |||||||||||||| |||||||||||    
T  15458911 aagctatcagctaacttatcaataatccgctatttttaccaaacagagcc 15458862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 22958144 - 22958201
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    |||| ||||| ||| |||||| |||||||||| | |||||||||||||| ||||||||    
T  22958144 ttataagctataagttatcagctagcttatcaatcatccgctatttttaccaaacaga 22958201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 3427104 - 3427052
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    ||||| ||||||| || |||||||| || ||||||||||||||| ||||||||    
T  3427104 agctataagctataagctagcttataagctatccgctatttttaccaaacaga 3427052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 6339040 - 6339076
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||| |||||||||| |||||||||||    
T  6339040 tagcttatcagctataagctatcagctagcttatcag 6339076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 9339866 - 9339810
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    ||||| ||||||| |  |||||||| |||||||||||||||||| |||||| |||||    
T  9339866 agctataagctattaactagcttataagttatccgctatttttaccaaacatagcca 9339810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 10619568 - 10619604
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||  |||||||||||    
T  10619568 tagcttatcagctaaaagctatcaactagcttatcag 10619604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17082356 - 17082392
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||  |||||||||||    
T  17082356 tagcttatcagctaaaagctatcaactagcttatcag 17082392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17082382 - 17082418
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||| |||||||||| |||||||||||    
T  17082382 tagcttatcagctataagctatcagctagcttatcag 17082418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17082408 - 17082444
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||| |||||||||| |||||||||||    
T  17082408 tagcttatcagctataagctatcagctagcttatcag 17082444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 17116206 - 17116238
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||| |||||||||||    
T  17116206 ttatcagctaaaagctatcagctagcttatcag 17116238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 23415258 - 23415294
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  23415258 tagcttatcagctaaaaactatcagctagcttatcag 23415294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 25024056 - 25024092
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||| |||||||||||||||| |||||||||||    
T  25024056 tagcttataagctaaaagctatcagctagcttatcag 25024092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 25024082 - 25024118
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||| |||||||||| |||||||||||    
T  25024082 tagcttatcagctataagctatcagctagcttatcag 25024118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 31582450 - 31582486
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||| |||||||||| |||||||||||    
T  31582450 tagcttatcagctataagctatcagctagcttatcag 31582486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39319508 - 39319472
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  39319508 tagcttatcagctaaaaactatcagctagcttatcag 39319472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 9428 - 9359
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| ||||    
T  9428 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcctaaat 9359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41127 - 41062
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  41127 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcca 41062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 41153 - 41117
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||| |||||||||||||||| |||||||||||    
T  41153 tagcttataagctaaaagctatcagctagcttatcag 41117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 27720006 - 27719937
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| ||||    
T  27720006 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcctaaat 27719937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 34232286 - 34232221
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  34232286 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcca 34232221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 559063 - 559127
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  559063 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 559127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 1805785 - 1805721
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  1805785 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 1805721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 6709111 - 6709040
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaatta 72  Q
    ||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| |||||||||||| |||||    
T  6709111 tagcttatcagctgaaagctatcagctagcttatcagctatccgctatttttaccaaacagagccataatta 6709040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 31451366 - 31451303
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagc 64  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||    
T  31451366 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagc 31451303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 2443176 - 2443240
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  2443176 tagcttataagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 2443240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 7316994 - 7316930
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||| |||||||||||    
T  7316994 tagcttatcagctaaaagctatcagctagcttataagctatccgctatttttaccaaacagagcc 7316930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 28721179 - 28721115
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  28721179 tagcttataagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 28721115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 12432089 - 12432025
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| |||||||||||||||| || |||||||| ||||||||||||||| |||||||||||    
T  12432089 tagcttataagctaaaagctatcagctaacttatcagctatccgctatttttaccaaacagagcc 12432025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 14226992 - 14226928
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||| |||||||||| | ||||||||| ||||||||||||||| |||||||||||    
T  14226992 tagcttatcagctataagctatcagcttgcttatcagatatccgctatttttaccaaacagagcc 14226928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 32732535 - 32732599
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||| |||||||||  ||||||||||| ||||||||||||||| |||||||||||    
T  32732535 tagcttatcagctataagctatcatctagcttatcagctatccgctatttttaccaaacagagcc 32732599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 34684432 - 34684372
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||| ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  34684432 ttatcagttaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 34684372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 3636289 - 3636231
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  3636289 atcagctataagctatcaactagcttatcagtcatccgctatttttaccaaacagagcc 3636231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 29413390 - 29413332
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||| |||||||||| |||||||||||| |||| ||||||||| |||||||||||    
T  29413390 atcagctataagctatcagctagcttatcagtcatccactatttttaccaaacagagcc 29413332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 12140202 - 12140154
Alignment:
Q  17 agctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||| ||| ||||||||||||||||||||||| |||||||||||    
T  12140202 agctatcagctagtttatcagttatccgctatttttaccaaacagagcc 12140154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 28077218 - 28077277
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||| |||||||||| |||||||| |  ||||||||||||||| |||||||||||    
T  28077218 tatcagctataagctatcaggtagcttataaactatccgctatttttaccaaacagagcc 28077277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 31099441 - 31099370
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaatta 72  Q
    |||||||| ||||||||| |||||| ||||||||||| ||   |||||||||| ||||||||||| ||||||    
T  31099441 tagcttataagctaaaagttatcagctagcttatcagctaaaagctatttttaccaaacagagcctaaatta 31099370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34904663 - 34904730
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaa 68  Q
    ||||||||||  |||||| |||||| || |||||||| |||||| |||||||| ||||||||||||||    
T  34904663 tagcttatcaattaaaagttatcagctaacttatcagctatccgttatttttaccaaacagagccaaa 34904730  T

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Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 14227018 - 14226982
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  14227018 tagcttatcagctaaaagctatcagctagcttatcag 14226982  T

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Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 32732483 - 32732519
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  32732483 tagcttatcagctaaaagctatcagctagcttatcag 32732519  T

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Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 34232338 - 34232302
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  34232338 tagcttatcagctaaaagctatcagctagcttatcag 34232302  T

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Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 5300983 - 5300924
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    |||||||| ||||||| || |||||||| |  ||||||||||||||| ||||||||||||    
T  5300983 atcagctataagctataagctagcttataaactatccgctatttttaccaaacagagcca 5300924  T

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Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 22757008 - 22757067
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||| ||||||| || || ||||| || ||||||||||||||| |||||||||||    
T  22757008 tatcagctataagctataagctaacttataagctatccgctatttttaccaaacagagcc 22757067  T

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Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 29822373 - 29822318
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||| |||||||||| |||||||||| | |||||||||||||| |||| ||||||    
T  29822373 agctataagctatcagctagcttatcaatcatccgctatttttaccaaagagagcc 29822318  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 20783960 - 20783919
Alignment:
Q  19 ctatcagttagcttatcagttatccgctatttttatcaaaca 60  Q
    ||||||| ||| ||||||| ||||||||||||||||||||||    
T  20783960 ctatcagatagtttatcagctatccgctatttttatcaaaca 20783919  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 3107260 - 3107204
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacaga 62  Q
    ||||||||||||||| |||| ||||||||||| ||   |||||||||| ||||||||    
T  3107260 tatcagctaaaagctctcagctagcttatcagctaaaagctatttttaccaaacaga 3107204  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 32732509 - 32732545
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||| |||||||||| |||||||||||    
T  32732509 tagcttatcagctataagctatcagctagcttatcag 32732545  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 34232312 - 34232276
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||| |||||||||| |||||||||||    
T  34232312 tagcttatcagctataagctatcagctagcttatcag 34232276  T

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Target: scaffold0122 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 11843 - 11779
Alignment:
Q  5 ttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaa 69  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  11843 ttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagccaaaa 11779  T

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Target: scaffold0116 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25646 - 25710
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  25646 tagcttatcagctaaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 25710  T

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Target: scaffold0031 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 129567 - 129502
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcca 66  Q
    |||||||||||||| |||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  129567 tagcttatcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagcca 129502  T

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Target: scaffold0246 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7779 - 7843
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||| ||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  7779 tagcttatcagctaaaatctatcagctagcttatcagctatccgctatttttaccaaacagagcc 7843  T

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Target: scaffold0471 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2122 - 2053
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaat 70  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||  ||||| ||||||||||||||||    
T  2122 tagcttatcagctaaaagctatcagctagcttattagctatccgcttattttaccaaacagagccaaaat 2053  T

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Target: scaffold0471; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2148 - 2112
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  2148 tagcttatcagctaaaagctatcagctagcttatcag 2112  T

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Target: scaffold0197 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 28428 - 28364
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||| | ||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  28428 tagcttatcagttcaaagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 28364  T

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Target: scaffold0197; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 27656 - 27589
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaa 68  Q
    ||||||||||||||||||||||||  || |||||||| |||||| |||||||| ||||||||||||||    
T  27656 tagcttatcagctaaaagctatcaactatcttatcaggtatccgttatttttaccaaacagagccaaa 27589  T

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Target: scaffold0197; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28454 - 28416
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagtt 39  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  28454 tagcttatcaactaaaagctatcagctagcttatcagtt 28416  T

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Target: scaffold0362 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 6151 - 6215
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||||||||||||| ||||||  || |||||||| ||||||||||||||| |||||||||||    
T  6151 tagcttatcagctaaaaactatcaactaacttatcagctatccgctatttttaccaaacagagcc 6215  T

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Target: scaffold0016 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 92902 - 92843
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||| ||||||| || |||||||| ||||||||||||||| |||||||||||    
T  92902 tatcagctaaaaactatcagctaacttatcagctatccgctatttttaccaaacagagcc 92843  T

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Target: scaffold0016; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 92999 - 92963
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  92999 tagcttatcagctaaaagctatcagctagcttatcag 92963  T

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Target: scaffold0016; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 92947 - 92911
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  92947 tagcttatcagctaaaagctatcagctagtttatcag 92911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 92973 - 92937
Alignment:
Q  1 tagcttatcagctaaaagctatcagttagcttatcag 37  Q
    |||||||||||||| |||||||||| |||||||||||    
T  92973 tagcttatcagctataagctatcagatagcttatcag 92937  T

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Target: scaffold0002 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 432007 - 432066
Alignment:
Q  6 tatcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||||||||| ||| || |||||||| ||||||||||||||| |||||||||||    
T  432007 tatcagctaaaagctaccagctaacttatcagctatccgctatttttaccaaacagagcc 432066  T

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Target: scaffold0041 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 72122 - 72056
Alignment:
Q  7 atcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagccaaaattat 73  Q
    |||||||| |||||||||  || |||||||||||||||||||||||| |||||| |||||| |||||    
T  72122 atcagctataagctatcaactaacttatcagttatccgctatttttaccaaacatagccaatattat 72056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 5204 - 5261
Alignment:
Q  8 tcagctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||||| |||||||||| ||||||||||| || |||||||||||| |||||||||||    
T  5204 tcagctataagctatcagctagcttatcagctaaccgctatttttaccaaacagagcc 5261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 98709 - 98764
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    ||||| |||||||||| || ||||||||| |||||||||||||| |||||||||||    
T  98709 agctataagctatcagctaacttatcagtcatccgctatttttaccaaacagagcc 98764  T

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Target: scaffold0173 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 22272 - 22220
Alignment:
Q  13 taaaagctatcagttagcttatcagttatccgctatttttatcaaacagagcc 65  Q
    |||||||||| || ||||||||||| |||||| |||||||| |||||||||||    
T  22272 taaaagctataagctagcttatcagctatccgttatttttaccaaacagagcc 22220  T

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Target: scaffold0343 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 10056 - 10104
Alignment:
Q  10 agctaaaagctatcagttagcttatcagttatccgctatttttatcaaa 58  Q
    ||||| |||||||| | || |||||||| ||||||||||||||||||||    
T  10056 agctataagctatcggctaacttatcagctatccgctatttttatcaaa 10104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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