View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2515_low_7 (Length: 350)

Name: NF2515_low_7
Description: NF2515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2515_low_7
NF2515_low_7
[»] chr4 (51 HSPs)
chr4 (16-211)||(5260197-5260392)
chr4 (16-217)||(48419363-48419565)
chr4 (16-214)||(13294602-13294802)
chr4 (16-215)||(9525955-9526155)
chr4 (21-214)||(33692262-33692456)
chr4 (16-216)||(49621437-49621638)
chr4 (16-215)||(23163426-23163626)
chr4 (16-214)||(28458668-28458867)
chr4 (22-201)||(3546501-3546682)
chr4 (22-221)||(21053448-21053648)
chr4 (27-204)||(50161274-50161452)
chr4 (16-214)||(55140198-55140395)
chr4 (16-215)||(33369508-33369711)
chr4 (16-217)||(20931123-20931326)
chr4 (23-214)||(26202522-26202714)
chr4 (16-214)||(21707749-21707948)
chr4 (16-214)||(42856948-42857147)
chr4 (16-214)||(41689389-41689591)
chr4 (16-214)||(52690243-52690443)
chr4 (22-214)||(37872767-37872956)
chr4 (16-215)||(46143418-46143617)
chr4 (16-148)||(23549644-23549776)
chr4 (16-83)||(55742740-55742807)
chr4 (16-214)||(2685985-2686178)
chr4 (22-145)||(30799391-30799513)
chr4 (22-216)||(25297678-25297875)
chr4 (123-217)||(33692516-33692610)
chr4 (123-220)||(49621691-49621789)
chr4 (123-215)||(13294856-13294949)
chr4 (123-214)||(23163281-23163373)
chr4 (22-145)||(30055280-30055403)
chr4 (123-215)||(52690095-52690187)
chr4 (22-141)||(50977604-50977723)
chr4 (156-217)||(20930972-20931033)
chr4 (94-215)||(42856803-42856925)
chr4 (157-217)||(55742896-55742956)
chr4 (163-214)||(55742621-55742672)
chr4 (156-214)||(5260480-5260538)
chr4 (123-213)||(46143273-46143364)
chr4 (156-213)||(30799611-30799668)
chr4 (123-204)||(50161125-50161209)
chr4 (163-215)||(30055498-30055550)
chr4 (156-215)||(3546778-3546837)
chr4 (163-214)||(9525805-9525856)
chr4 (94-144)||(22335505-22335555)
chr4 (123-217)||(37873016-37873111)
chr4 (123-201)||(21707616-21707694)
chr4 (156-204)||(30799302-30799350)
chr4 (156-204)||(41689679-41689727)
chr4 (99-143)||(53232328-53232372)
chr4 (157-213)||(55140485-55140541)
[»] chr7 (32 HSPs)
chr7 (16-225)||(32177844-32178054)
chr7 (16-215)||(19305890-19306090)
chr7 (21-203)||(32523212-32523395)
chr7 (16-217)||(8437451-8437654)
chr7 (16-224)||(49113852-49114060)
chr7 (16-214)||(7417511-7417711)
chr7 (16-204)||(28408252-28408441)
chr7 (16-204)||(37453213-37453402)
chr7 (16-148)||(45746870-45747002)
chr7 (45-215)||(2933444-2933615)
chr7 (16-214)||(32832234-32832434)
chr7 (22-215)||(1511339-1511533)
chr7 (22-145)||(44307688-44307810)
chr7 (16-215)||(10878624-10878825)
chr7 (123-215)||(28408495-28408587)
chr7 (123-216)||(7417766-7417859)
chr7 (27-148)||(29226337-29226457)
chr7 (22-217)||(31894255-31894448)
chr7 (123-215)||(8437304-8437397)
chr7 (277-329)||(25971263-25971315)
chr7 (123-225)||(32178108-32178211)
chr7 (156-218)||(49114150-49114212)
chr7 (123-204)||(32523456-32523538)
chr7 (156-215)||(19305739-19305798)
chr7 (123-215)||(31894509-31894601)
chr7 (123-214)||(1511190-1511281)
chr7 (123-219)||(24986715-24986810)
chr7 (92-144)||(27612277-27612329)
chr7 (21-142)||(30060555-30060675)
chr7 (157-216)||(44307609-44307668)
chr7 (123-204)||(2933296-2933378)
chr7 (123-204)||(32832487-32832569)
[»] chr2 (30 HSPs)
chr2 (16-214)||(2318493-2318691)
chr2 (16-220)||(17846002-17846207)
chr2 (16-214)||(20364117-20364316)
chr2 (16-217)||(9319949-9320151)
chr2 (16-224)||(18916615-18916824)
chr2 (16-214)||(10108813-10109013)
chr2 (16-214)||(10044745-10044944)
chr2 (16-215)||(27360118-27360320)
chr2 (22-204)||(44536336-44536520)
chr2 (21-204)||(4261163-4261346)
chr2 (16-214)||(601327-601528)
chr2 (22-214)||(30337424-30337617)
chr2 (96-215)||(8322411-8322529)
chr2 (123-216)||(2318744-2318837)
chr2 (123-215)||(27360375-27360468)
chr2 (92-204)||(13862503-13862615)
chr2 (123-214)||(20363970-20364062)
chr2 (123-204)||(9319812-9319894)
chr2 (156-220)||(4261443-4261507)
chr2 (123-218)||(18916878-18916974)
chr2 (156-215)||(44536178-44536237)
chr2 (98-144)||(37084688-37084734)
chr2 (123-203)||(17846261-17846342)
chr2 (156-215)||(601620-601679)
chr2 (22-137)||(5547232-5547347)
chr2 (92-142)||(9991921-9991971)
chr2 (156-221)||(8322237-8322302)
chr2 (101-142)||(10520866-10520907)
chr2 (157-214)||(18178377-18178434)
chr2 (92-137)||(43520394-43520439)
[»] chr8 (34 HSPs)
chr8 (21-214)||(30904512-30904705)
chr8 (16-215)||(2967869-2968070)
chr8 (16-215)||(27912094-27912295)
chr8 (16-215)||(27958513-27958714)
chr8 (16-220)||(35482696-35482901)
chr8 (16-204)||(10682206-10682396)
chr8 (16-204)||(17875778-17875967)
chr8 (22-216)||(23792733-23792927)
chr8 (22-145)||(20223176-20223298)
chr8 (22-214)||(44379522-44379715)
chr8 (16-215)||(3691581-3691782)
chr8 (16-145)||(42123848-42123977)
chr8 (27-204)||(17844040-17844216)
chr8 (22-214)||(30928466-30928658)
chr8 (22-203)||(4128752-4128934)
chr8 (16-145)||(7899830-7899959)
chr8 (25-220)||(13327418-13327616)
chr8 (22-144)||(27523108-27523229)
chr8 (92-144)||(38464711-38464763)
chr8 (123-216)||(2968123-2968217)
chr8 (123-215)||(10682060-10682152)
chr8 (16-70)||(14577010-14577064)
chr8 (123-220)||(17876023-17876121)
chr8 (123-215)||(27912351-27912444)
chr8 (123-215)||(27958770-27958863)
chr8 (123-215)||(35482955-35483048)
chr8 (156-215)||(14577153-14577212)
chr8 (123-216)||(30904359-30904453)
chr8 (156-204)||(17866335-17866383)
chr8 (157-196)||(16509659-16509698)
chr8 (157-216)||(20178369-20178428)
chr8 (157-216)||(20223097-20223156)
chr8 (99-142)||(31231317-31231360)
chr8 (156-204)||(13795524-13795572)
[»] chr1 (26 HSPs)
chr1 (24-212)||(30002364-30002552)
chr1 (16-215)||(30562783-30562982)
chr1 (16-215)||(1549326-1549526)
chr1 (16-216)||(2026719-2026920)
chr1 (16-220)||(40902474-40902679)
chr1 (16-215)||(17611571-17611771)
chr1 (16-215)||(17985435-17985634)
chr1 (16-214)||(7114010-7114208)
chr1 (23-204)||(25780043-25780224)
chr1 (16-148)||(12139091-12139223)
chr1 (123-215)||(17611424-17611517)
chr1 (22-145)||(12115024-12115146)
chr1 (22-145)||(19897330-19897452)
chr1 (123-214)||(2026973-2027065)
chr1 (25-198)||(4969380-4969555)
chr1 (123-214)||(40902327-40902419)
chr1 (123-204)||(30002221-30002303)
chr1 (123-215)||(12115205-12115298)
chr1 (157-215)||(7113864-7113922)
chr1 (156-214)||(12139312-12139370)
chr1 (123-217)||(17985284-17985379)
chr1 (156-220)||(25779879-25779943)
chr1 (156-203)||(19897187-19897234)
chr1 (123-220)||(30563036-30563135)
chr1 (163-216)||(40290076-40290129)
chr1 (92-144)||(47193951-47194003)
[»] chr5 (38 HSPs)
chr5 (16-216)||(40833934-40834135)
chr5 (16-221)||(18485806-18486012)
chr5 (215-333)||(43579537-43579655)
chr5 (16-214)||(20769712-20769911)
chr5 (16-214)||(32936352-32936551)
chr5 (16-215)||(7145532-7145737)
chr5 (22-214)||(2094725-2094918)
chr5 (16-214)||(30370657-30370856)
chr5 (22-203)||(3539749-3539930)
chr5 (16-215)||(13600592-13600792)
chr5 (22-215)||(35363136-35363336)
chr5 (215-333)||(43590278-43590396)
chr5 (22-216)||(35362070-35362265)
chr5 (48-214)||(27843023-27843189)
chr5 (25-214)||(25363016-25363205)
chr5 (22-145)||(132201-132324)
chr5 (22-220)||(15178942-15179141)
chr5 (22-145)||(32994299-32994422)
chr5 (275-333)||(1060260-1060318)
chr5 (123-220)||(35362978-35363076)
chr5 (92-143)||(14274308-14274359)
chr5 (99-214)||(19558102-19558218)
chr5 (94-215)||(13600443-13600568)
chr5 (123-217)||(32936203-32936298)
chr5 (123-220)||(2094569-2094667)
chr5 (94-214)||(7145762-7145884)
chr5 (123-214)||(18485659-18485751)
chr5 (123-214)||(30370511-30370603)
chr5 (123-214)||(40834189-40834281)
chr5 (163-215)||(37093738-37093790)
chr5 (95-142)||(3294396-3294443)
chr5 (156-203)||(3539608-3539655)
chr5 (156-215)||(20339155-20339214)
chr5 (157-216)||(32458075-32458134)
chr5 (156-215)||(32994442-32994501)
chr5 (92-143)||(33568984-33569035)
chr5 (99-142)||(42858555-42858598)
chr5 (92-144)||(38981783-38981835)
[»] chr3 (38 HSPs)
chr3 (16-215)||(8851951-8852152)
chr3 (21-218)||(55009095-55009291)
chr3 (16-215)||(22316719-22316919)
chr3 (16-215)||(37513090-37513290)
chr3 (22-220)||(22975339-22975538)
chr3 (16-214)||(28829753-28829951)
chr3 (16-214)||(23043336-23043535)
chr3 (16-204)||(36229773-36229962)
chr3 (16-215)||(49620977-49621177)
chr3 (16-221)||(25847438-25847644)
chr3 (16-196)||(49984857-49985038)
chr3 (24-213)||(48433957-48434147)
chr3 (22-201)||(49711552-49711731)
chr3 (16-138)||(9296528-9296650)
chr3 (16-215)||(11121282-11121482)
chr3 (16-224)||(17574363-17574569)
chr3 (22-204)||(44506056-44506239)
chr3 (22-80)||(3612749-3612807)
chr3 (123-215)||(8851803-8851896)
chr3 (123-214)||(37513344-37513436)
chr3 (94-215)||(25847668-25847791)
chr3 (123-204)||(11121535-11121618)
chr3 (123-214)||(22316973-22317065)
chr3 (123-214)||(49621232-49621324)
chr3 (123-215)||(49711400-49711492)
chr3 (156-221)||(33491595-33491660)
chr3 (123-204)||(9296393-9296474)
chr3 (92-144)||(35850872-35850924)
chr3 (156-204)||(55009386-55009434)
chr3 (157-204)||(3612605-3612652)
chr3 (157-204)||(22975633-22975680)
chr3 (156-215)||(28830040-28830099)
chr3 (123-204)||(36230016-36230099)
chr3 (156-214)||(33491692-33491750)
chr3 (156-202)||(48433810-48433856)
chr3 (99-144)||(1341957-1342002)
chr3 (93-142)||(12012782-12012831)
chr3 (157-214)||(44506332-44506389)
[»] chr6 (15 HSPs)
chr6 (16-213)||(33595320-33595518)
chr6 (16-215)||(3218288-3218487)
chr6 (16-215)||(4242922-4243122)
chr6 (16-224)||(23068844-23069051)
chr6 (16-148)||(6754984-6755116)
chr6 (16-214)||(3922685-3922884)
chr6 (16-203)||(14763329-14763517)
chr6 (123-217)||(23068693-23068788)
chr6 (123-215)||(33595573-33595666)
chr6 (123-217)||(3922536-3922631)
chr6 (123-215)||(4243176-4243269)
chr6 (156-220)||(14763595-14763659)
chr6 (123-214)||(6755170-6755262)
chr6 (123-213)||(3218152-3218243)
chr6 (100-144)||(20491722-20491766)
[»] scaffold0029 (2 HSPs)
scaffold0029 (16-215)||(137062-137260)
scaffold0029 (123-215)||(136915-137008)
[»] scaffold0002 (2 HSPs)
scaffold0002 (16-215)||(330343-330541)
scaffold0002 (123-215)||(330196-330289)
[»] scaffold0311 (2 HSPs)
scaffold0311 (22-145)||(12667-12790)
scaffold0311 (123-215)||(12850-12943)
[»] scaffold0347 (2 HSPs)
scaffold0347 (158-217)||(12223-12282)
scaffold0347 (164-214)||(11940-11990)
[»] scaffold1577 (1 HSPs)
scaffold1577 (22-148)||(1025-1150)


Alignment Details
Target: chr4 (Bit Score: 114; Significance: 9e-58; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 16 - 211
Target Start/End: Complemental strand, 5260392 - 5260197
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||        ||||||||||||||||||||||||    
T  5260392 aaaaaatcatcaaactcataggcagacgtaaatcttcatcatacaagcatagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 5260293  T
Q  116 gtctttctataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctatttt 211  Q
    ||| || ||||||||||||||||||||||||||       |||||| |||||||||||||| |||||||||||||| |||||||||||||||||||    
T  5260292 gtcattttataacataaaggactaaatcgtgacaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgctatttt 5260197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 16 - 217
Target Start/End: Original strand, 48419363 - 48419565
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||        ||||||||||||||||||||||||    
T  48419363 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttttttgaaaaaaatctcataaaaaatgataagatatt 48419462  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| |||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  48419463 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgttattttgcc 48419562  T
Q  215 ttt 217  Q
    |||    
T  48419563 ttt 48419565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 13294802 - 13294602
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| |||||||||| |||||||||| ||||||||||||||| ||||| |||||||||||||||||||        ||||||||||||||||||||||||    
T  13294802 aaaaaatcatcaaacacataggcaaatgtaaatcttcatcatacaagcatagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 13294703  T
Q  116 gtctttctataacataaaggactaaatcgtgac--nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgc 213  Q
    ||| || ||||||||||||||||||||||||||         |||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  13294702 gtcattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacataaaataaagttaagggactaattgtgctattttgc 13294603  T
Q  214 c 214  Q
    |    
T  13294602 c 13294602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 9525955 - 9526155
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||        ||||||||||||||||||||||||    
T  9525955 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaagcttataaaatcaaatttcttttaaaaaaatctcataaaaaatgataagatatt 9526054  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| || |||| |||||| |||||||||||||| |||||||||||| |||||||||    
T  9526055 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtgttattttgcc 9526154  T
Q  215 t 215  Q
    |    
T  9526155 t 9526155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 21 - 214
Target Start/End: Complemental strand, 33692456 - 33692262
Alignment:
Q  21 atcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtctt 120  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||||| |    
T  33692456 atcatcaaactcataggcaaatgcaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcat 33692357  T
Q  121 tctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    | ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  33692356 tttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 33692262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 49621638 - 49621437
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| || || || ||||||||||||||||        ||||||||||||||||||||||||    
T  49621638 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacacgcatataaaatcaaatttctttgaaaaacatctcataaaaaatgataagatatt 49621539  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  49621538 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 49621439  T
Q  215 tt 216  Q
    ||    
T  49621438 tt 49621437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 23163426 - 23163626
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| |||||||||||||||||||||||||||||||||| || ||||| || ||||||||||||||||        ||||||||||||||||||||||||    
T  23163426 aaaaaatcatcaaactcataggcaaacgtaaatcttcattatacaagcatataaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 23163525  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  23163526 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 23163625  T
Q  215 t 215  Q
    |    
T  23163626 t 23163626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 28458668 - 28458867
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  28458668 aaaaaatcatcaaactcataggcaaacgcaaatcttcaacatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 28458767  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| | |||| |||||||||||||| ||||||||||||  ||||||||    
T  28458768 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtattacctaaaataaagttaagggactaattgtgtaattttgcc 28458867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 22 - 201
Target Start/End: Complemental strand, 3546682 - 3546501
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtcttt 121  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||||| ||    
T  3546682 tcatcaaactcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaagaatctcataaaaaatgataagatattgtcatt 3546583  T
Q  122 ctataacataaaggactaaatcgtgac--nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaatt 201  Q
     ||||||||||||||||||||||||||         |||||| ||| ||| |||||| |||||||||||||| |||||||||    
T  3546582 ttataacataaaggactaaatcgtgaccaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaagggactaatt 3546501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 22 - 221
Target Start/End: Original strand, 21053448 - 21053648
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtcttt 121  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||||| ||    
T  21053448 tcatcaaactcgtaggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcatt 21053547  T
Q  122 ctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctttatt 220  Q
     ||||| ||||||||||||||||| ||        |||||| || |||| |||||| |||||||||||||| ||||||||||||  |||||||||| |||    
T  21053548 ttataatataaaggactaaatcgtaacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgccttaatt 21053647  T
Q  221 a 221  Q
    |    
T  21053648 a 21053648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 27 - 204
Target Start/End: Original strand, 50161274 - 50161452
Alignment:
Q  27 aaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtctttctata 126  Q
    ||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||        ||||||||||||||||||||||||||| || ||||    
T  50161274 aaactcataggcaaacgtaaatcttcatcatacaagcatataaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttata 50161373  T
Q  127 acataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    ||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||    
T  50161374 acataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtg 50161452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 55140395 - 55140198
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  55140395 aaaaaatcatcaaactcataggcaaacgcaaatcttcattatacaagcctagaaaatcaaatttcttt-gaaaaaatctcataaaaaatgataagatatt 55140297  T
Q  116 gtctttctataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||| ||||||||||||||||||||       |||||| ||||||| |||||| |||||||||||||| ||| |||| |||  ||||||||    
T  55140296 gtcattttataaaataaaggactaaatcgtgacaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggattaatcgtgtaattttgcc 55140198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 33369711 - 33369508
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcat-aaaaaatgataagatat 114  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        |||||| |||||||||||||||||    
T  33369711 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaaatgataagatat 33369612  T
Q  115 tgtctttctataacataaaggactaaatcgtgac---nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctatttt 211  Q
    |||| || ||||||||||| ||||||||||||||          || ||| ||||||| |||||| |||||||||||||| ||||||||||||  |||||    
T  33369611 tgtcattttataacataaatgactaaatcgtgacaaaaaaaaaagaaaaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 33369512  T
Q  212 gcct 215  Q
    ||||    
T  33369511 gcct 33369508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 16 - 217
Target Start/End: Original strand, 20931123 - 20931326
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||        | ||||||||||||||||||||||    
T  20931123 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaagcttagaaaatcaaatttctttgaaaaaaatatcataaaaaatgataagatatt 20931222  T
Q  116 gtctttctataacataaaggactaaatcgtgac--nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgc 213  Q
    ||| || ||||||||||||||||||||||||||         |||||| ||||||| |||||  |||||||||||||| | |||||| |||  |||||||    
T  20931223 gtcattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttatctaaaataaagttaaggaactaatcgtgtaattttgc 20931322  T
Q  214 cttt 217  Q
    ||||    
T  20931323 cttt 20931326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 214
Target Start/End: Complemental strand, 26202714 - 26202522
Alignment:
Q  23 catcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtctttc 122  Q
    ||||||||||||||| ||||| ||||||||||||| |||||| ||||||| ||||||||||        ||||||||||||||||||||||||||| ||     
T  26202714 catcaaactcataggtaaacgcaaatcttcatcatacaagccaagaaaattaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattt 26202615  T
Q  123 tataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  26202614 tataacataaaggactaaatcgtgacaagaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 26202522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 21707749 - 21707948
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        |||| |||||||||||||||||||    
T  21707749 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcttaaaaaatgataagatatt 21707848  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| ||  |||||||||||||||||||||||||        ||||||  |||||| | |||| ||||||||||||||  |||||||||||  ||||||||    
T  21707849 gtcatttaataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtattacctaaaataaagttaagagactaattgtgtaattttgcc 21707948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 42856948 - 42857147
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||        ||||||||||||||||||||||||    
T  42856948 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaagcttagaaaatcaaatttttttgaaaaaaatctcataaaaaatgataagatatt 42857047  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    |   || ||||||||||||||||||||||||||        |||||| ||||||| |||||| ||||||||| |||| ||||||||||||  ||||||||    
T  42857048 gcaattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagggactaattgtgtaattttgcc 42857147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 41689591 - 41689389
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttcttt-cnnnnnnntctcataaaaaatgataagatat 114  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||           |||||||||||||||||||||    
T  41689591 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaaaattcataaaaaatgataagatat 41689492  T
Q  115 tgtctttctataacataaaggactaaatcgtg---acnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctatttt 211  Q
    |||| || ||||||||||||||||||||||||   |        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  |||||    
T  41689491 tgtcattttataacataaaggactaaatcgtgaaaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 41689392  T
Q  212 gcc 214  Q
    |||    
T  41689391 gcc 41689389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 52690243 - 52690443
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| |||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  52690243 aaaaaatcatcaaactcataggcaa-cgcaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 52690341  T
Q  116 gtctttctataacataaaggactaaatcgtgac---nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttg 212  Q
    ||| || ||||||||||| ||||||||||| ||          |||||| ||||||| |||||| ||||||||||||||  |||||||||||  ||||||    
T  52690342 gtcattttataacataaacgactaaatcgtaaccaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagagactaattgtgtaattttg 52690441  T
Q  213 cc 214  Q
    ||    
T  52690442 cc 52690443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 22 - 214
Target Start/End: Complemental strand, 37872956 - 37872767
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtcttt 121  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||              ||||||||||||||||||||||||||| ||    
T  37872956 tcatcaaactcgtaggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatg------aaaaaaatctcataaaaaatgataagatattgtcatt 37872863  T
Q  122 ctataacataaaggactaaatcgtgac---nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
     ||||||||||||||||||||||||||          |||||| |||||||||||||| |||||||||||||| ||||||||||||  ||||||||    
T  37872862 ttataacataaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcc 37872767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 46143418 - 46143617
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||        |||||||||||||||||| |||||    
T  46143418 aaaaaatcatcaaattcataggcaaacgtaaatcttcatca-taaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataaaatatt 46143516  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
     || || ||||| ||||||||||||||||||||         ||||| ||||||| |||||| |||||||||||||| | ||||||||||  ||||||||    
T  46143517 atcattttataatataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaaggcactaattgtgtaattttgcc 46143616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 23549644 - 23549776
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||| ||||||||||||| ||||||||||||| |||||||||||||| |||||| |||        |||||||||||||||| |||||||    
T  23549644 aaaaaatcatcaaattcataggcaaacgcaaatcttcatcatacaagcctagaaaattaaatttttttgaaaaaaatctcataaaaaatgatgagatatt 23549743  T
Q  116 gtctttctataacataaaggactaaatcgtgac 148  Q
    ||| || ||||||||||||||||||| ||||||    
T  23549744 gtcattttataacataaaggactaaaccgtgac 23549776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 55742807 - 55742740
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttcttt 83  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  55742807 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttcttt 55742740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 2686178 - 2685985
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| |||||||||||||||| |||||| ||||| ||||||| | |||||||||||||||||||| ||        |||||| ||||||||||| |||      
T  2686178 aaaaaatcatcaaactcatagacaaacgcaaatcgtcatcatactagcctagaaaatcaaatttcatt-gaaaaaatctcat-aaaaatgataaaatagc 2686081  T
Q  116 gtctttctataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||| ||        | ||| ||||||| |||||| |||||| ||||||| ||||||||||||  ||||||||    
T  2686080 gtcattttataacataaaggactaaatcgttacaaaaa---aaaaaagacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 2685985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 30799513 - 30799391
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcata-aaaaatgataagatattgtctt 120  Q
    ||||||||||||||| |||||| |||| |||||||| | |||||||||||||||||||| ||        ||||||| ||||||||||| ||| |||| |    
T  30799513 tcatcaaactcatagacaaacgcaaatattcatcatactagcctagaaaatcaaatttcatt--gaaaaatctcatacaaaaatgataaaatagtgtcat 30799416  T
Q  121 tctataacataaaggactaaatcgt 145  Q
    | |||||||||||||||||||||||    
T  30799415 tttataacataaaggactaaatcgt 30799391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 216
Target Start/End: Complemental strand, 25297875 - 25297678
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcata-aaaaatgataagatattgtctt 120  Q
    ||||||||||||||| |||||| |||||||| |||| | |||||||||||||| ||||| ||        ||||||| ||||||||||| ||  |||| |    
T  25297875 tcatcaaactcatagacaaacgcaaatcttcgtcatactagcctagaaaatcagatttcatt-gaaaaaatctcatacaaaaatgataaaattgtgtcat 25297777  T
Q  121 tctataacataaaggactaaatcgtgac---nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctt 216  Q
    | ||||||||||||||||||||||| ||          |||||| ||||||| |||||| |||||| ||||||| ||||||||||||  ||||||||||    
T  25297776 tttataacataaaggactaaatcgttacaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcctt 25297678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 217
Target Start/End: Original strand, 33692516 - 33692610
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgccttt 217  Q
    ||||||||| ||||||||||||||||       |||||||||||||| |||||| ||||||||| |||| ||||||||||||  |||||||||||    
T  33692516 tataacatagaggactaaatcgtgacaaaaaaagataaatgacgaaagtgttacctaaaataaaattaagggactaattgtgtaattttgccttt 33692610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 220
Target Start/End: Original strand, 49621691 - 49621789
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctttatt 220  Q
    ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||||||||    
T  49621691 tataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctttatt 49621789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 13294856 - 13294949
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  |||||||||    
T  13294856 tataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 13294949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 214
Target Start/End: Complemental strand, 23163373 - 23163281
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  23163373 tataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 23163281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 30055403 - 30055280
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcata-aaaaatgataagatattgtctt 120  Q
    |||||||||||||||||||||| ||||||| ||||| | || | |||||||||||||| | |        ||||||| ||||||||||| ||| |||| |    
T  30055403 tcatcaaactcataggcaaacgcaaatctttatcatactagtcaagaaaatcaaattt-tattgaaaaaatctcatacaaaaatgataaaatagtgtcat 30055305  T
Q  121 tctataacataaaggactaaatcgt 145  Q
    | |||||||||||||||||||||||    
T  30055304 tttataacataaaggactaaatcgt 30055280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 52690187 - 52690095
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||||||||| ||||||||||||||||       |||||| ||||||||| |||| ||||||||||||||  |||||||||||  |||||||||    
T  52690187 tataacatagaggactaaatcgtgacaaaaaaagataaaggacgaaaatattacctaaaataaagttaagcgactaattgtgtaattttgcct 52690095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 50977604 - 50977723
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtcttt 121  Q
    ||||||||||||||  |||||  ||||||||||||| ||| |||| ||||||| ||| | ||        ||||||||||||||||| ||||||||| ||    
T  50977604 tcatcaaactcataaacaaactcaaatcttcatcatacaaacctaaaaaatcatattccattgaaaaaaatctcataaaaaatgatacgatattgtcatt 50977703  T
Q  122 ctataacataaaggactaaa 141  Q
     ||||| |||||||||||||    
T  50977704 ttataatataaaggactaaa 50977723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 20931033 - 20930972
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgccttt 217  Q
    |||||| ||||||| |||||| |||||||||||||| ||||||||||||  |||||||||||    
T  20931033 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgccttt 20930972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 215
Target Start/End: Complemental strand, 42856925 - 42856803
Alignment:
Q  94 tcataaaaaatgataag-atattgtctttctataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaa 192  Q
    ||||||||||||||||  || ||||  || ||||||||||| ||||||||||||||        ||||| ||||||| |||||| ||||||||| ||||     
T  42856925 tcataaaaaatgataactatgttgttattttataacataaaagactaaatcgtgaccaaaaaaaataaaggacgaaagtgttacctaaaataaaattaag 42856826  T
Q  193 ggactaattgtgctattttgcct 215  Q
    ||||||||||||  |||||||||    
T  42856825 ggactaattgtgtaattttgcct 42856803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 55742896 - 55742956
Alignment:
Q  157 ataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgccttt 217  Q
    ||||| ||||||| |||||  |||||||||||||||||||||||||||  |||||||||||    
T  55742896 ataaaggacgaaagtgttatctaaaataaagttaaaggactaattgtgtaattttgccttt 55742956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 55742672 - 55742621
Alignment:
Q  163 gacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    |||||||||||||| |||||||||||||| ||||||||||||  ||||||||    
T  55742672 gacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcc 55742621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 5260480 - 5260538
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    |||||| |||||||||||||| ||||||||||||||| |||||||| ||  ||||||||    
T  5260480 gataaaggacgaaaatgttacctaaaataaagttaaaagactaattatgtaattttgcc 5260538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 46143364 - 46143273
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgc 213  Q
    |||||||||||||||||||| |||||        |||||| |||||||||||||| ||||||||| |||| ||||||||||||  |||||||    
T  46143364 tataacataaaggactaaattgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaaattaagggactaattgtgtaattttgc 46143273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 30799611 - 30799668
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgc 213  Q
    |||||| |||||||||||||| |||||| ||||||| ||||||||||||  |||||||    
T  30799611 gataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgc 30799668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 50161209 - 50161125
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn---gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    ||||||||||||||||||||||||||          |||||| ||||||| |||||| |||||||||||||| ||||||||||||    
T  50161209 tataacataaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtg 50161125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 30055498 - 30055550
Alignment:
Q  163 gacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    |||||||||||||| |||||| ||||||| ||||||||||||  |||||||||    
T  30055498 gacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcct 30055550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 3546778 - 3546837
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    |||||||||||||| |||||| ||||||||||||||   ||||||||||  |||||||||    
T  3546778 gataaatgacgaaagtgttacctaaaataaagttaagaaactaattgtgtaattttgcct 3546837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 9525856 - 9525805
Alignment:
Q  163 gacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  9525856 gacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 9525805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 22335555 - 22335505
Alignment:
Q  94 tcataaaaaatgataagatattgtctttctataacataaaggactaaatcg 144  Q
    ||||||||||||| ||||||||||| || |||||| ||||||| |||||||    
T  22335555 tcataaaaaatgagaagatattgtcattttataacgtaaaggaataaatcg 22335505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 217
Target Start/End: Original strand, 37873016 - 37873111
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgccttt 217  Q
    ||||||||||| ||||||||||||||        |||||| ||||||| |||| |||||||||||||||| ||||||||| |   |||||||||||    
T  37873016 tataacataaatgactaaatcgtgacaaaaaaaagataaaggacgaaagtgttgcataaaataaagttaagggactaattatataattttgccttt 37873111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 21707694 - 21707616
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaatt 201  Q
    ||||||||||| ||||||||||||||       ||||||  |||||||| |||| ||||||||||||||  ||||||||    
T  21707694 tataacataaatgactaaatcgtgacaaaaaaagataaaaaacgaaaatattacttaaaataaagttaagagactaatt 21707616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 30799350 - 30799302
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    |||||| ||||||| |||||| |||||| ||||||| ||||||||||||    
T  30799350 gataaaggacgaaagtgttacctaaaattaagttaagggactaattgtg 30799302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 41689679 - 41689727
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    |||||| ||||||||| |||| |||||||||||||| || |||||||||    
T  41689679 gataaaggacgaaaatattacttaaaataaagttaaggggctaattgtg 41689727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 53232328 - 53232372
Alignment:
Q  99 aaaaatgataagatattgtctttctataacataaaggactaaatc 143  Q
    |||||| ||||||||||||| || ||||| |||||||||||||||    
T  53232328 aaaaataataagatattgtcattttataatataaaggactaaatc 53232372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 55140485 - 55140541
Alignment:
Q  157 ataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgc 213  Q
    ||||| ||||||| | |||| |||||||||||||||||| ||||||||  |||||||    
T  55140485 ataaaggacgaaagtattacttaaaataaagttaaaggattaattgtgtaattttgc 55140541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 4e-57; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 16 - 225
Target Start/End: Complemental strand, 32178054 - 32177844
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||        ||||||||||||||||||||||||    
T  32178054 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaaacctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 32177955  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| |||||||||||||| |||||||||||||||||||||||||||  ||||||||    
T  32177954 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaaaggactaattgtgtaattttgcc 32177855  T
Q  215 tttattaaata 225  Q
    || | ||||||    
T  32177854 ttaaataaata 32177844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 19305890 - 19306090
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| |||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||        ||||||||||||||||||||||||    
T  19305890 aaaaaatcatcaaactcataggcaaacataaatcttcatcatacaagcatagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 19305989  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| |||||  |||||||||||||| ||||||||||||||||||||||    
T  19305990 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttaactaaaataaagttaagggactaattgtgctattttgcc 19306089  T
Q  215 t 215  Q
    |    
T  19306090 t 19306090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 32523395 - 32523212
Alignment:
Q  21 atcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtctt 120  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||||| |    
T  32523395 atcatcaaactcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcat 32523296  T
Q  121 tctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgt 203  Q
    | ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| |||||||||||    
T  32523295 tttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgt 32523212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 16 - 217
Target Start/End: Original strand, 8437451 - 8437654
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||        ||||||||||||||||||||||||    
T  8437451 aaaatatcatcaaactcataggcaaacgtaaatcttcatcatacaagcctagaaaattaaatttctttgaaaaaaatctcataaaaaatgataagatatt 8437550  T
Q  116 gtctttctataacataaaggactaaatcgtgac--nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgc 213  Q
    | | || ||||||||||||||||||||||||||         |||||| ||||||| |||||| |||||||||||||| ||||||||| ||  |||||||    
T  8437551 ggcattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattatgtaattttgc 8437650  T
Q  214 cttt 217  Q
    ||||    
T  8437651 cttt 8437654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 16 - 224
Target Start/End: Complemental strand, 49114060 - 49113852
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| |||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||        ||||||||||||||||||||||||    
T  49114060 aaaaaatcatcaaactcataggcaa-cgtaaatcttcatcatacaagcctggaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 49113962  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||| ||        |||||| ||||||| |||||| |||||||||||||||||||||||||||  ||||||||    
T  49113961 gtcattttataacataaaggactaaatcgtaacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaaggactaattgtgtaattttgcc 49113862  T
Q  215 tttattaaat 224  Q
    | | ||||||    
T  49113861 tattttaaat 49113852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 7417711 - 7417511
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||        ||||||| ||||||||||||||||    
T  7417711 aaaaaatcatcaaactcataggcaaacgcaaatcttcatcatacaagtctagaaaatcaaatttctttaaaaaaaatctcatacaaaatgataagatatt 7417612  T
Q  116 gtctttctataacataaaggactaaatcgtgac--nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgc 213  Q
    ||| || ||||||||||||||||||||||||||         |||||| |||||||||||||| |||||||||||||| ||| ||||||||  |||||||    
T  7417611 gtcattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggattaattgtgtaattttgc 7417512  T
Q  214 c 214  Q
    |    
T  7417511 c 7417511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 16 - 204
Target Start/End: Complemental strand, 28408441 - 28408252
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| || || || ||||||||||||||||        ||||||||||||||||||||||||    
T  28408441 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacacgcatataaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 28408342  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    ||| || ||||||||||||||||||||| ||||        |||||| ||||||| |||||| |||||||||||||| || |||||||||    
T  28408341 gtcattttataacataaaggactaaatcatgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaggggctaattgtg 28408252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 204
Target Start/End: Original strand, 37453213 - 37453402
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| |||||||||||||   ||||||||||||||||||||| |||||||||||||||||||||||||        | ||||||||||||||||||||||    
T  37453213 aaaaaatcatcaaactcaatagcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatttcataaaaaatgataagatatt 37453312  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    ||| || ||||||||||||||||||| ||||||        |||||| ||||||| |||||| |||||||||||||| ||||| ||||||    
T  37453313 gtcattttataacataaaggactaaaccgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactgattgtg 37453402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 45746870 - 45747002
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttcttt-cnnnnnnntctcataaaaaatgataagatat 114  Q
    |||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||         |||||||||||||||||||||||    
T  45746870 aaaaaatcatcaaactcataggcaaacgcaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaaatctcataaaaaatgataagatat 45746969  T
Q  115 tgtctttctataacataaaggactaaatcgtgac 148  Q
    |||| || ||||||||||| ||||||||||||||    
T  45746970 tgtcattttataacataaa-gactaaatcgtgac 45747002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 215
Target Start/End: Original strand, 2933444 - 2933615
Alignment:
Q  45 aaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtctttctataacataaaggactaaatcg 144  Q
    |||| |||||||| ||||| |||||||||||||||||||        |||||||||||||||||||||||| || || ||||||||||||||||||||||    
T  2933444 aaattttcatcatacaagcatagaaaatcaaatttctttgaaaagaatctcataaaaaatgataagatattttcattttataacataaaggactaaatcg 2933543  T
Q  145 tgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||||         ||||| ||||||| |||||| |||||||||||||| | |||||||||||||||||||||    
T  2933544 tgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaaggaactaattgtgctattttgcct 2933615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 32832434 - 32832234
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnn-tctcataaaaaatgataagatat 114  Q
    |||| ||||||||||||| ||| |||||||||| |||||||| ||||| |||||||||||||||||||         |||||||||||||||||||||||    
T  32832434 aaaaaatcatcaaactcacaggtaaacgtaaattttcatcatacaagcatagaaaatcaaatttctttgaaaaaaaatctcataaaaaatgataagatat 32832335  T
Q  115 tgtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgc 213  Q
    |||| || |||||||||||||||||||| |||||        |||||| ||  ||| |||||| ||||||||| |||| |||||||||||  ||||||||    
T  32832334 tgtcattttataacataaaggactaaattgtgacaaaaaaaagataaaagataaaagtgttacctaaaataaaattaagggactaattgtattattttgc 32832235  T
Q  214 c 214  Q
    |    
T  32832234 c 32832234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 215
Target Start/End: Original strand, 1511339 - 1511533
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaa--aatgataagatattgtct 119  Q
    ||||||||||||||| |||||||||||||||||||| | | |||||||||||||||||| ||        ||||||||||  |||||||| ||| ||||     
T  1511339 tcatcaaactcatagacaaacgtaaatcttcatcatactaacctagaaaatcaaatttcatt-gaaaaaatctcataaaaaaaatgataaaatagtgtca 1511437  T
Q  120 ttctataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    || ||||||||||||||||||||||| ||       |||||| ||||||| |||||| |||| | ||||||| ||||||||||||  |||||||||    
T  1511438 ttttataacataaaggactaaatcgttacaaaaaaagataaaggacgaaagtgttacctaaatttaagttaagggactaattgtgtaattttgcct 1511533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 44307810 - 44307688
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtcttt 121  Q
    ||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||| ||        |||||||||||||||||| ||| |||| ||    
T  44307810 tcatcaaactcatagacaaacgtaaatcttcatcatactagcctagaaaatcaaatttcatt-gaaaaaatctcataaaaaatgataaaatagtgtcatt 44307712  T
Q  122 ctataacataaaggactaaatcgt 145  Q
     ||||| |||||||||||||||||    
T  44307711 ttataatataaaggactaaatcgt 44307688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 10878825 - 10878624
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcat-aaaaaatgataagatat 114  Q
    |||| |||||||||||||||| |||||| ||||| ||||||| | ||||||| |||||||||||| ||        |||||| |||||||||||| |||     
T  10878825 aaaaaatcatcaaactcatagacaaacgcaaatcgtcatcatactagcctag-aaatcaaatttcatt-gaaaaaatctcataaaaaaatgataaaatag 10878728  T
Q  115 tgtctttctataacataaaggactaaatcgtgac---nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctatttt 211  Q
    |||| || ||||||||||||||||||||||| ||          |||||| ||||||| |||||| |||||| ||||||| ||||||||||||  |||||    
T  10878727 tgtcattttataacataaaggactaaatcgttacaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaatttt 10878628  T
Q  212 gcct 215  Q
    ||||    
T  10878627 gcct 10878624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 28408495 - 28408587
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||||||||||||||||||||||||||       |||||| ||||||| |||||| |||||||||||||| ||||||||||||  |||||||||    
T  28408495 tataacataaaggactaaatcgtgacaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 28408587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 7417766 - 7417859
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctt 216  Q
    ||||||| ||||||||||||||||||       |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||||    
T  7417766 tataacaaaaaggactaaatcgtgacaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctt 7417859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 29226457 - 29226337
Alignment:
Q  27 aaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtctttctata 126  Q
    |||||||||| |||||| |||||||||| || |||   |||||||||||||||| ||         ||||||||||||||||||||||| || || ||||    
T  29226457 aaactcatagacaaacgcaaatcttcattatacaattttagaaaatcaaatttcattgaaaaaaa-ctcataaaaaatgataagatattatcattttata 29226359  T
Q  127 acataaaggactaaatcgtgac 148  Q
    ||||||||||||||||||||||    
T  29226358 acataaaggactaaatcgtgac 29226337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 31894448 - 31894255
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcat-aaaaaatgataagatattgtctt 120  Q
    ||||||||||||||| |||||| ||||||||||||| | || | | ||||| ||||||| ||        |||||| |||||||||||| ||| |||| |    
T  31894448 tcatcaaactcatagacaaacgcaaatcttcatcatactagtcaataaaattaaatttcatt--gaaaaatctcattaaaaaatgataaaatagtgtcat 31894351  T
Q  121 tctataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgccttt 217  Q
    | ||||||||||||||||||||||| ||        ||||| ||||||| |||||| |||||| ||||||| |||||| |||||  |||||||||||    
T  31894350 tttataacataaaggactaaatcgttacaaaaaaa-ataaaggacgaaagtgttacctaaaattaagttaagggactatttgtgtaattttgccttt 31894255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 8437397 - 8437304
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||||||||||||||||||||| ||||        |||||| ||||||| ||||||||||||||||||||| ||||||||||||  |||||||||    
T  8437397 tataacataaaggactaaatcatgacagaaaaaagataaaggacgaaagtgttacataaaataaagttaagggactaattgtgtaattttgcct 8437304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 329
Target Start/End: Complemental strand, 25971315 - 25971263
Alignment:
Q  277 aatacataccctcatttctcaatctctcacaccatttcatctttccttcttac 329  Q
    |||| |||||||||||||| | |||||||||||||||||||||||||||||||    
T  25971315 aatatataccctcatttcttagtctctcacaccatttcatctttccttcttac 25971263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 123 - 225
Target Start/End: Original strand, 32178108 - 32178211
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctttatta 221  Q
    ||||||||||||||||||||||||||        |||||| ||| ||| |||||| |||||||||||||| ||||||||||||  ||||| ||||||||     
T  32178108 tataacataaaggactaaatcgtgacaaaagaaagataaaggacaaaagtgttacctaaaataaagttaagggactaattgtgtaattttacctttattt 32178207  T
Q  222 aata 225  Q
    ||||    
T  32178208 aata 32178211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 49114150 - 49114212
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgccttta 218  Q
    |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||||||    
T  49114150 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgccttta 49114212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 32523456 - 32523538
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||    
T  32523456 tataacataaaggactaaatcgtgacaaataaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtg 32523538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 19305798 - 19305739
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    |||||| ||||||| |||||| |||||||||||||| ||||||||||||  |||||||||    
T  19305798 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 19305739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 31894509 - 31894601
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||||||||||||||||||||||| ||        ||||| |||||||||||||  |||||| ||||||| ||||||||||||  |||||||||    
T  31894509 tataacataaaggactaaatcgttacaaaaaaaaataaaggacgaaaatgttatctaaaattaagttaagggactaattgtgtaattttgcct 31894601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 214
Target Start/End: Complemental strand, 1511281 - 1511190
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||||||||||||||||||||||| ||        ||||| ||||||||| |||| |||||| ||||||| ||||||||||||  ||||||||    
T  1511281 tataacataaaggactaaatcgttacaaaaaaaaataaaggacgaaaatattacctaaaattaagttaagggactaattgtgtaattttgcc 1511190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 219
Target Start/End: Complemental strand, 24986810 - 24986715
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnnga-taaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctttat 219  Q
    ||||||||||||||||||||||||||        | |||| ||||||| |||||| ||||||||| ||||||||||||||||   |||||||||||||    
T  24986810 tataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaaattaaaggactaattgt--aattttgcctttat 24986715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 27612277 - 27612329
Alignment:
Q  92 tctcataaaaaatgataagatattgtctttctataacataaaggactaaatcg 144  Q
    |||||| |||||||||||||||||||| || ||||||||| | ||||||||||    
T  27612277 tctcattaaaaatgataagatattgtcattttataacatataagactaaatcg 27612329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 142
Target Start/End: Original strand, 30060555 - 30060675
Alignment:
Q  21 atcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtctt 120  Q
    ||||||||||||||| ||||||  ||||||||||||| ||| |  ||||||||  ||||| ||        |||| ||||||||||||| |||||||| |    
T  30060555 atcatcaaactcataagcaaacccaaatcttcatcatacaaacaaagaaaatccgatttcatt-gaaaaaatctcttaaaaaatgataaaatattgtcat 30060653  T
Q  121 tctataacataaaggactaaat 142  Q
    |  |||||||||||||||||||    
T  30060654 ttcataacataaaggactaaat 30060675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 44307668 - 44307609
Alignment:
Q  157 ataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctt 216  Q
    ||||| ||||||| |||||| |||||| ||||||| ||||||||||||  ||||||||||    
T  44307668 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcctt 44307609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 2933378 - 2933296
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    |||||||||||||||||||||||||         |||||| || |||| |||||| |||||||||||||| ||||||||||||    
T  2933378 tataacataaaggactaaatcgtgataaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtg 2933296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 32832487 - 32832569
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    |||||||||||||||||||||||||         |||||| ||||||| |||||| ||||||||| |||| ||||||||||||    
T  32832487 tataacataaaggactaaatcgtgataaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagggactaattgtg 32832569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 4e-57; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 2318691 - 2318493
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||        ||||||||||||||||||||||||    
T  2318691 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaagcatagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 2318592  T
Q  116 gtctttctataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        ||||| ||||||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  2318591 gtcattttataacataaaggactaaatcgtgacaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgctattttgcc 2318493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 16 - 220
Target Start/End: Complemental strand, 17846207 - 17846002
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| |||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||        ||||||||||||||||||||||||    
T  17846207 aaaaaatcatcaaactcttaggcaaacgtaaatcttcatcatacaagtctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 17846108  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| |||||||||||||| |||||||||||||| ||||||||||||  ||||||||    
T  17846107 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcc 17846008  T
Q  215 tttatt 220  Q
    ||||||    
T  17846007 tttatt 17846002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 20364117 - 20364316
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  20364117 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 20364216  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||         ||||| ||||||| |||||| |||||||||||||||||||||||||||  ||||||||    
T  20364217 gtcattttataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaaaggactaattgtgtaattttgcc 20364316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 16 - 217
Target Start/End: Original strand, 9319949 - 9320151
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| |||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||        ||||||||||||||||||||||||    
T  9319949 aaaaaatcatcaaacgcataggcaaacgtaaatcttcatcatacaagtctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 9320048  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  9320049 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 9320148  T
Q  215 ttt 217  Q
    |||    
T  9320149 ttt 9320151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 16 - 224
Target Start/End: Complemental strand, 18916824 - 18916615
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| || || || ||||||||||||||||        ||||||||||||||||||||||||    
T  18916824 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacacgcatataaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 18916725  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  18916724 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 18916625  T
Q  215 tttattaaat 224  Q
    | | ||||||    
T  18916624 tattttaaat 18916615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 10109013 - 10108813
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||        ||||||||||||||||||||||||    
T  10109013 aaaaaatcatcaaactcataggcaaacgcaaatcttcatcatacaagcctagaaaattaaatttctttgaaaaaaatctcataaaaaatgataagatatt 10108914  T
Q  116 gtctttctataacataaaggactaaatcgtgac--nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgc 213  Q
    ||| || ||||||||||| ||||||||||||||         |||||| ||||||| |||||| |||||||||||||| ||||||||||||  |||||||    
T  10108913 gtcattttataacataaatgactaaatcgtgacaaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgc 10108814  T
Q  214 c 214  Q
    |    
T  10108813 c 10108813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 10044944 - 10044745
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  10044944 aaaaaatcatcaaattcataggcaaacgcaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 10044845  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||| |||||||| |||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  10044844 gtcattttataacataaatgactaaattgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 10044745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 27360320 - 27360118
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        |||| |||||||||||||||||||    
T  27360320 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcttaaaaaatgataagatatt 27360221  T
Q  116 gtctttctataacataaaggactaaatcgtgac---nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttg 212  Q
    ||| ||  ||||||||||||||||||| |||||           ||||| ||||||||| |||| |||||||||||||| ||||||||||||  ||||||    
T  27360220 gtcatttaataacataaaggactaaattgtgacaaaaaaaaaatataaaggacgaaaatattacctaaaataaagttaagggactaattgtgtaattttg 27360121  T
Q  213 cct 215  Q
    |||    
T  27360120 cct 27360118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 22 - 204
Target Start/End: Original strand, 44536336 - 44536520
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttcttt-cnnnnnnntctcataaaaaatgataagatattgtctt 120  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||         ||||||||||||||||||||||||||| |    
T  44536336 tcatcaaactcataggcaaatgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaaatctcataaaaaatgataagatattgtcat 44536435  T
Q  121 tctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    | ||||||||||||||||||||||||||        |||||| || |||| |||||| |||||||||||||| ||||||||||||    
T  44536436 tttataacataaaggactaaatcgtgacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtg 44536520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 21 - 204
Target Start/End: Complemental strand, 4261346 - 4261163
Alignment:
Q  21 atcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtctt 120  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||||||||| |||||||||        ||||||||||||||||||||||||||| |    
T  4261346 atcatcaaactcataggcaa-cgcaaatcttcatcatacaagcctagaaaatctaatttctttgaaaaaaatctcataaaaaatgataagatattgtcat 4261248  T
Q  121 tctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    | ||||||||||||||||||||||| ||        |||||| ||||||| |||||| ||||||||| |||| ||||||||||||    
T  4261247 tttataacataaaggactaaatcgtaacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagggactaattgtg 4261163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 601528 - 601327
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||| |||||||||||||||  |||  || ||||||||||||||||        ||||||||||||||||||||||||    
T  601528 aaaaaatcatcaaactcataggcaaatgtaaatcttcatcataaaagtatataaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 601429  T
Q  116 gtctttctataacataaaggactaaatcgtgac--nnnnnnngataaatgacgaaaatgttacataaaataaagttaaag-gactaattgtgctattttg 212  Q
    ||| || ||||  ||||| ||||||||||||||         |||||| ||||||| |||||| |||||||||||||||| || ||||||||  ||||||    
T  601428 gtcattttatattataaaagactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaagagattaattgtgtaattttg 601329  T
Q  213 cc 214  Q
    ||    
T  601328 cc 601327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 214
Target Start/End: Complemental strand, 30337617 - 30337424
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcata-aaaaatgataagatattgtctt 120  Q
    ||||||||||||||| |||||| ||||||||||||| | |  | ||||||||||||||| ||        ||||||| ||||||||||| ||| |||| |    
T  30337617 tcatcaaactcatagacaaacgcaaatcttcatcatactattcaagaaaatcaaatttcatt-gaaaaattctcatacaaaaatgataaaatagtgtcat 30337519  T
Q  121 tctataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    | ||||||||||||||||||||||| ||        |||||| |||||||||||||| |||||| ||||||| ||||||||||||  ||||||||    
T  30337518 tttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaatggactaattgtgtaattttgcc 30337424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 96 - 215
Target Start/End: Original strand, 8322411 - 8322529
Alignment:
Q  96 ataaaaaatgataagatattgtctttctataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaagga 195  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||        |||||| |||||||||||||| |||||| ||||||| |||    
T  8322411 ataaaaaatgataagatattgtcattttataacataaaggactaaatcgtga-aaaaaaagataaaggacgaaaatgttacctaaaattaagttaaggga 8322509  T
Q  196 ctaattgtgctattttgcct 215  Q
    | |||| ||  |||||||||    
T  8322510 cgaattctgtaattttgcct 8322529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 2318744 - 2318837
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctt 216  Q
    ||||||||||| ||||||||||||||       |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||||    
T  2318744 tataacataaaagactaaatcgtgacaaaagaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctt 2318837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 27360375 - 27360468
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||||||||||||||||||||||||||        |||||| |||||||||||||| |||||||||||||| ||||||||||||  |||||||||    
T  27360375 tataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcct 27360468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 204
Target Start/End: Complemental strand, 13862615 - 13862503
Alignment:
Q  92 tctcataaaaaatgataagatattgtctttctataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaa 191  Q
    |||||| |||||||| || |||||||| || |||||||||||||||||| ||| |||       |||||| ||||||| | |||| |||||| |||||||    
T  13862615 tctcattaaaaatgaaaaaatattgtcattttataacataaaggactaattcgagacaaaaaaagataaaggacgaaagtattacttaaaattaagttaa 13862516  T
Q  192 aggactaattgtg 204  Q
    ||||| |||||||    
T  13862515 aggacgaattgtg 13862503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 214
Target Start/End: Complemental strand, 20364062 - 20363970
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||||||||||||||||||||||||||        |||||| |||||||||||||| ||||||||| |||| ||||||||||||  ||||||||    
T  20364062 tataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaaattaagggactaattgtgtaattttgcc 20363970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 9319894 - 9319812
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||    
T  9319894 tataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtg 9319812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 4261443 - 4261507
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctttatt 220  Q
    |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||| ||||    
T  4261443 gataaaggacgaaagtgttacctaaaataaagttaacggactaattgtgtaattttgcctatatt 4261507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 218
Target Start/End: Original strand, 18916878 - 18916974
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgccttta 218  Q
    ||||||||||||||||||||||||||        ||||||  |||||| |||||| |||||||||||||| ||||||||| ||  ||||||||||||    
T  18916878 tataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtgttacctaaaataaagttaagggactaattatgtaattttgccttta 18916974  T

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Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 44536237 - 44536178
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    |||||| |||| || |||||| |||||||||||||||||||||||||||| || ||||||    
T  44536237 gataaaggacggaagtgttacctaaaataaagttaaaggactaattgtgcaatattgcct 44536178  T

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Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 37084734 - 37084688
Alignment:
Q  98 aaaaaatgataagatattgtctttctataacataaaggactaaatcg 144  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||    
T  37084734 aaaaaatgataagatattgtcattttataacataaatgactaaatcg 37084688  T

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Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 17846261 - 17846342
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgt 203  Q
    ||||||||| ||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| |||||||||||    
T  17846261 tataacatataggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgt 17846342  T

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Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 601620 - 601679
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    |||||| ||| ||| |||||| |||||||||||||| ||||||||||||  |||||||||    
T  601620 gataaaggacaaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 601679  T

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Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 5547232 - 5547347
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcat-aaaaaatgataagatattgtctt 120  Q
    |||||||| |||||| |||||  ||||||||||||| | |||||||||||| ||||||| ||        |||||| |||||||||||| ||| |||| |    
T  5547232 tcatcaaattcatagacaaacacaaatcttcatcatactagcctagaaaattaaatttcatt-gaaaaaatctcataaaaaaatgataaaataatgtcat 5547330  T
Q  121 tctataacataaaggac 137  Q
    | |||||||||||||||    
T  5547331 tttataacataaaggac 5547347  T

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Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 142
Target Start/End: Complemental strand, 9991971 - 9991921
Alignment:
Q  92 tctcataaaaaatgataagatattgtctttctataacataaaggactaaat 142  Q
    |||||||||||||||||| |||||||| || || || ||||||||||||||    
T  9991971 tctcataaaaaatgataaaatattgtcattttagaatataaaggactaaat 9991921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 8322302 - 8322237
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctttatta 221  Q
    |||||| ||||||| ||||||||||||| |||||||| ||| || ||||  ||||||||| |||||    
T  8322302 gataaaagacgaaagtgttacataaaattaagttaaatgacgaaatgtgtaattttgcctatatta 8322237  T

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Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 142
Target Start/End: Complemental strand, 10520907 - 10520866
Alignment:
Q  101 aaatgataagatattgtctttctataacataaaggactaaat 142  Q
    |||||||||||||||||| || ||||| ||||||||||||||    
T  10520907 aaatgataagatattgtcattttataatataaaggactaaat 10520866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 18178377 - 18178434
Alignment:
Q  157 ataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||||| ||||||| | |||| ||| |||||||||||||||||||||||  ||||||||    
T  18178377 ataaaggacgaaagtattacctaatataaagttaaaggactaattgtgtaattttgcc 18178434  T

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Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 43520394 - 43520439
Alignment:
Q  92 tctcataaaaaatgataagatattgtctttctataacataaaggac 137  Q
    |||||| |||| ||||||||||||||| || |||||||||||||||    
T  43520394 tctcattaaaattgataagatattgtcattttataacataaaggac 43520439  T

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Target: chr8 (Bit Score: 112; Significance: 1e-56; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 21 - 214
Target Start/End: Original strand, 30904512 - 30904705
Alignment:
Q  21 atcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtctt 120  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||||| |    
T  30904512 atcatcaaactcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcat 30904611  T
Q  121 tctataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    | ||||||||||||||||||||||||||       |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  30904612 tttataacataaaggactaaatcgtgacaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 30904705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 2968070 - 2967869
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaa-tgataagatat 114  Q
    |||| |||||||||||||||||||||| ||||||||||||||  |||| |||||||||||||||||||        |||||||||||| |||||||||||    
T  2968070 aaaaaatcatcaaactcataggcaaacataaatcttcatcatagaagcatagaaaatcaaatttctttgaaaaaaatctcataaaaaaatgataagatat 2967971  T
Q  115 tgtctttctataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgc 213  Q
    |||| || ||||||||||||||||||||||||||        |||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  2967970 tgtcattttataacataaaggactaaatcgtgacaaaaataagataaatgacgaaagtgttacctaaaataaagttaagggactaattgtgctattttgc 2967871  T
Q  214 ct 215  Q
    ||    
T  2967870 ct 2967869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 27912295 - 27912094
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||| ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||        ||||||||||||||||||||||||    
T  27912295 aaaaaatcatcatactcataggcaaacgtaaatcttcatcaaacaagcatagaaaatcaaatttctttaaaaaaaatctcataaaaaatgataagatatt 27912196  T
Q  116 gtctttctataacataaaggactaaatcgtgac--nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgc 213  Q
    ||  || ||||||||||||||||||||||||||         |||||| ||||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  27912195 gtaattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgctattttgc 27912096  T
Q  214 ct 215  Q
    ||    
T  27912095 ct 27912094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 27958714 - 27958513
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||| ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||        ||||||||||||||||||||||||    
T  27958714 aaaaaatcatcatactcataggcaaacgtaaatcttcatcaaacaagcatagaaaatcaaatttctttaaaaaaaatctcataaaaaatgataagatatt 27958615  T
Q  116 gtctttctataacataaaggactaaatcgtgac--nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgc 213  Q
    ||  || ||||||||||||||||||||||||||         |||||| ||||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  27958614 gtaattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgctattttgc 27958515  T
Q  214 ct 215  Q
    ||    
T  27958514 ct 27958513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 16 - 220
Target Start/End: Complemental strand, 35482901 - 35482696
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| || || || |||||| |||||||||        ||||||||||||||||||||||||    
T  35482901 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacacgcatataaaatcgaatttctttgaaaaacatctcataaaaaatgataagatatt 35482802  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  35482801 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 35482702  T
Q  215 tttatt 220  Q
    | ||||    
T  35482701 tatatt 35482696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 204
Target Start/End: Original strand, 10682206 - 10682396
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||| ||||||||||||||||||    
T  10682206 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcacaaaaaatgataagatatt 10682305  T
Q  116 gtctttctataacataaaggactaaatcgtgac--nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    ||| || ||||||||||||||||||||||||||          ||||| ||||||| |||| | |||||||||||||| ||||||||||||    
T  10682306 gtcattttataacataaaggactaaatcgtgacaaaaaaaaaaataaaggacgaaagtgtttcctaaaataaagttaagggactaattgtg 10682396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 16 - 204
Target Start/End: Complemental strand, 17875967 - 17875778
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||| | ||||||||||||| |||| ||||||||| ||||||||||        ||||||||||||||||||||||||    
T  17875967 aaaaaatcatcaaactcataggcaaatgcaaatcttcatcatacaagtctagaaaattaaatttctttgaaaaaaatctcataaaaaatgataagatatt 17875868  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||    
T  17875867 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtg 17875778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 216
Target Start/End: Original strand, 23792733 - 23792927
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcata-aaaaatgataagatattgtctt 120  Q
    ||||||||||| ||| |||||| ||||||||||||| | |||| ||||||||||||||| ||        ||||||| ||||||||||| ||| |||| |    
T  23792733 tcatcaaactcgtagacaaacgcaaatcttcatcatactagccaagaaaatcaaatttcatt-gaaaaaatctcatacaaaaatgataaaataatgtcat 23792831  T
Q  121 tctataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctt 216  Q
    | ||||||||||||||||||||||| ||       |||||| ||| ||| |||||| |||||| ||||||| |||||||||||| |||||||||||    
T  23792832 tttataacataaaggactaaatcgttacaaaaaaagataaaggacaaaagtgttacctaaaattaagttaagggactaattgtgttattttgcctt 23792927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 20223298 - 20223176
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtcttt 121  Q
    ||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||| ||        |||||||||||||||||| ||| |||| ||    
T  20223298 tcatcaaactcatagacaaacgtaaatcttcatcatactagcctagaaaatcaaatttcatt-gaaaaaatctcataaaaaatgataaaatagtgtcatt 20223200  T
Q  122 ctataacataaaggactaaatcgt 145  Q
     ||||| |||||||||||||||||    
T  20223199 ttataatataaaggactaaatcgt 20223176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 22 - 214
Target Start/End: Complemental strand, 44379715 - 44379522
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcata-aaaaatgataagatattgtctt 120  Q
    ||||||||||||||| |||||| ||||||||||||| | |||||||||||||||||||| ||        ||||||| ||||||||||| ||| |||| |    
T  44379715 tcatcaaactcatagacaaacgcaaatcttcatcatactagcctagaaaatcaaatttcatt-gaaaaaatctcatacaaaaatgataaaatagtgtcat 44379617  T
Q  121 tctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    | ||||||||||||||||||||||| ||        |||||| ||||||| |||||| |||||| ||||||| ||| ||||||||  ||||||||    
T  44379616 tttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggattaattgtgtaattttgcc 44379522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 3691782 - 3691581
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcata-aaaaatgataagatat 114  Q
    |||| |||||||||||||||| |||||  ||||||||||||| | |||||||||||| ||||||| ||        ||||||| ||||||||||| |||     
T  3691782 aaaaaatcatcaaactcatagacaaacacaaatcttcatcatactagcctagaaaattaaatttcatt-gaaaaaatctcatacaaaaatgataaaatag 3691684  T
Q  115 tgtctttctataacataaaggactaaatcgtgac--nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttg 212  Q
    |||| || ||||||||||||||||||||||| ||         |||||| ||||||| |||||| |||||| | ||||| ||||||||||||  ||||||    
T  3691683 tgtcattttataacataaaggactaaatcgttacaaaaaaaaagataaaggacgaaagtgttacctaaaattatgttaagggactaattgtgtaattttg 3691584  T
Q  213 cct 215  Q
    |||    
T  3691583 cct 3691581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 42123848 - 42123977
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcata-aaaaatgataagatat 114  Q
    |||| |||||||||||||||| |||||| ||| ||||||||| | |||||||||||||||||||| ||        ||||||| ||||||||||| |||     
T  42123848 aaaaaatcatcaaactcatagacaaacgcaaaccttcatcatactagcctagaaaatcaaatttcatt-gaaaaaatctcatacaaaaatgataaaatag 42123946  T
Q  115 tgtctttctataacataaaggactaaatcgt 145  Q
    |||| || |||||||||||||||||||||||    
T  42123947 tgtcattttataacataaaggactaaatcgt 42123977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 204
Target Start/End: Original strand, 17844040 - 17844216
Alignment:
Q  27 aaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtctttctata 126  Q
    |||| ||||| |||||| ||||||||||||| |||||||| ||||||||||||| ||        |||||||| ||||||||| |||||||| || ||||    
T  17844040 aaacacatagacaaacgcaaatcttcatcatacaagcctataaaatcaaatttcatt-gaaaaaatctcataagaaatgataaaatattgtcattttata 17844138  T
Q  127 acataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    ||||||| ||||||||||||||         ||||| ||||||| |||||| |||||| ||||||| ||||||||||||    
T  17844139 acataaa-gactaaatcgtgacaaaaaataaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtg 17844216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 214
Target Start/End: Original strand, 30928466 - 30928658
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtcttt 121  Q
    ||||||||||||||| |||||| ||||||||||||| | |||||||||||||||||||| ||        ||||||   ||||||||| ||| |||| ||    
T  30928466 tcatcaaactcatagacaaacgcaaatcttcatcataccagcctagaaaatcaaatttcatt-gaaaaaatctcat---aaatgataaaatagtgtcatt 30928561  T
Q  122 ctataacataaaggactaaatcgtgac----nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
     ||||||||||||||||||||||| ||           |||||| ||||||| |||||| |||||| ||||||| ||||||||||||  ||||||||    
T  30928562 ttataacataaaggactaaatcgttacaaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 30928658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 203
Target Start/End: Complemental strand, 4128934 - 4128752
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcat-aaaaaatgataagatattgtctt 120  Q
    ||||||||||||||| |||||| ||||||||||||| | || ||||||||||||||||| ||        |||||| |||||||||||| ||| | || |    
T  4128934 tcatcaaactcatagacaaacgcaaatcttcatcatactagtctagaaaatcaaatttcatt-gaaaaaatctcataaaaaaatgataaaatagtttcat 4128836  T
Q  121 tctataacataaaggactaaatcg-tgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgt 203  Q
    | |||||||||||||||||||||| | |        |||||| ||||||| |||||| |||||| || ||||||||||||||||    
T  4128835 tttataacataaaggactaaatcgttaaaaaaagaagataaaggacgaaagtgttacctaaaattaaattaaaggactaattgt 4128752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 7899959 - 7899830
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcat-aaaaaatgataagatat 114  Q
    |||| |||||||||||||||| |||||| ||||| ||||||| | ||||||||||||||||||| | |        |||||| |||||||||||| |||     
T  7899959 aaaaaatcatcaaactcatagacaaacgcaaatcgtcatcatactagcctagaaaatcaaattt-tattgaaaaaatctcataaaaaaatgataaaatag 7899861  T
Q  115 tgtctttctataacataaaggactaaatcgt 145  Q
    |||| || |||||||||||||||||||||||    
T  7899860 tgtcattttataacataaaggactaaatcgt 7899830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 220
Target Start/End: Original strand, 13327418 - 13327616
Alignment:
Q  25 tcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtctttcta 124  Q
    |||| ||||||| |||| | ||||||||||||| ||||||||| |||||||||||  ||        |||||||||||||||||| ||||| || || ||    
T  13327418 tcaatctcatagacaaatgcaaatcttcatcatacaagcctagcaaatcaaattttattgaaaaaaatctcataaaaaatgataaaatattatcatttta 13327517  T
Q  125 taacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaa--gttaaaggactaattgtgctattttgcctttatt 220  Q
    || ||||||||| |||||||||||        |||||| ||||||| |||||| |||||| ||  ||||| |||||||||| |  ||||||||||||||    
T  13327518 tatcataaaggattaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaattaattgttaagggactaattgcgtaattttgcctttatt 13327616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 144
Target Start/End: Original strand, 27523108 - 27523229
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtcttt 121  Q
    ||||||||||||||| |||||  |||| |||||||| |||| ||||||||||||||||| ||        ||||  ||||| ||||||||||||||| ||    
T  27523108 tcatcaaactcatagacaaacacaaattttcatcatacaagtctagaaaatcaaatttcatt-gaaaaactctcggaaaaattgataagatattgtcatt 27523206  T
Q  122 ctataacataaaggactaaatcg 144  Q
     ||||||||||||||||||||||    
T  27523207 ttataacataaaggactaaatcg 27523229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 38464763 - 38464711
Alignment:
Q  92 tctcataaaaaatgataagatattgtctttctataacataaaggactaaatcg 144  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  38464763 tctcataaaaaatgataagatattgtcattttataacataaaggactaaatcg 38464711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 2968123 - 2968217
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctt 216  Q
    ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||||    
T  2968123 tataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctt 2968217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 10682152 - 10682060
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||||||||||||||||||||||||||       ||||||  |||||| |||||| |||||||||||||| ||| ||||||||  |||||||||    
T  10682152 tataacataaaggactaaatcgtgactaaaaaagataaagaacgaaagtgttacctaaaataaagttaagggattaattgtgtaattttgcct 10682060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 14577064 - 14577010
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaa 70  Q
    |||| |||||||| |||||||||||||| ||||||||||||| ||||||||||||    
T  14577064 aaaaaatcatcaagctcataggcaaacgcaaatcttcatcatacaagcctagaaa 14577010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 220
Target Start/End: Original strand, 17876023 - 17876121
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctttatt 220  Q
    ||||||||| ||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||| ||||    
T  17876023 tataacatagaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctatatt 17876121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 27912351 - 27912444
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||||||||||| ||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  |||||||||    
T  27912351 tataacataaatgactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 27912444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 27958770 - 27958863
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||||||||||| ||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  |||||||||    
T  27958770 tataacataaatgactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 27958863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 35482955 - 35483048
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    |||||||||||||||||||| |||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  |||||||||    
T  35482955 tataacataaaggactaaattgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 35483048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 14577153 - 14577212
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    |||||| ||||||| |||||| |||||||||||||| ||||||||||||  |||||||||    
T  14577153 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 14577212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 216
Target Start/End: Complemental strand, 30904453 - 30904359
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctt 216  Q
    ||||||||||||||||||||| ||||        |||||| ||||||| |||||| |||||||||||||| ||| ||||||||  ||||||||||    
T  30904453 tataacataaaggactaaatcctgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggattaattgtgtaattttgcctt 30904359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 17866335 - 17866383
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    ||||||||||||||||||||||||| || ||||||| |||| |||||||    
T  17866335 gataaatgacgaaaatgttacataatattaagttaagggacgaattgtg 17866383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 196
Target Start/End: Complemental strand, 16509698 - 16509659
Alignment:
Q  157 ataaatgacgaaaatgttacataaaataaagttaaaggac 196  Q
    ||||||||||||||||||||||||||| ||||||| ||||    
T  16509698 ataaatgacgaaaatgttacataaaattaagttaagggac 16509659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 20178428 - 20178369
Alignment:
Q  157 ataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctt 216  Q
    ||||| ||||||| |||||| |||||| ||||||| ||||||||||||  ||||||||||    
T  20178428 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcctt 20178369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 20223156 - 20223097
Alignment:
Q  157 ataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctt 216  Q
    ||||| ||||||| |||||| |||||| ||||||| ||||||||||||  ||||||||||    
T  20223156 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcctt 20223097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 31231317 - 31231360
Alignment:
Q  99 aaaaatgataagatattgtctttctataacataaaggactaaat 142  Q
    |||||||||||||||||||  || ||||||||||||||||||||    
T  31231317 aaaaatgataagatattgttattttataacataaaggactaaat 31231360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 13795572 - 13795524
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    ||||||||||||||||||||  |||||| ||||||| |||| |||||||    
T  13795572 gataaatgacgaaaatgttagctaaaattaagttaagggacgaattgtg 13795524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 6e-56; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 24 - 212
Target Start/End: Original strand, 30002364 - 30002552
Alignment:
Q  24 atcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtctttct 123  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||        ||||||||||||||||||||||||||| || |    
T  30002364 atcaaactcataggcaaacgtaaatcttcatcatacaaacctagaaaatcaaatttctttaaaaaaaatctcataaaaaatgataagatattgtcatttt 30002463  T
Q  124 ataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttg 212  Q
    |||||||||||||||||||||||||       |||||| |||||||||||||| |||||||||||||| |||||||||||| |||||||    
T  30002464 ataacataaaggactaaatcgtgacaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgttattttg 30002552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 30562982 - 30562783
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  30562982 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 30562883  T
Q  116 gtctttctataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||| || |||||||||||| || ||||||||||       |||||| ||||||| |||||| |||||||||||||| |||||||||||| ||||||||||    
T  30562882 gtcattttataacataaagaaccaaatcgtgacaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgttattttgcct 30562783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 1549526 - 1549326
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  1549526 aaaaaatcatcaaattcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttaaaaaaaatctcataaaaaatgataagatatt 1549427  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| |||||||||||| |||||||||    
T  1549426 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgttattttgcc 1549327  T
Q  215 t 215  Q
    |    
T  1549326 t 1549326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 2026920 - 2026719
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  2026920 aaaaaatcatcaaactcataggcaaacgtaaatcttcttcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 2026821  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  2026820 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 2026721  T
Q  215 tt 216  Q
    ||    
T  2026720 tt 2026719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 220
Target Start/End: Original strand, 40902474 - 40902679
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||        ||||||||||||||||||||||||    
T  40902474 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaagcatagaaaatcaaatttctttgaaaataatctcataaaaaatgataagatatt 40902573  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| |  ||||||||||||||||||||||||||        |||||| ||| ||| |||||| |||||||||||||| ||||||||||||||||||| ||    
T  40902574 gtcatcttataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaagggactaattgtgctattttacc 40902673  T
Q  215 tttatt 220  Q
    | ||||    
T  40902674 tatatt 40902679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 17611571 - 17611771
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||        ||||||||||||||||||||||||    
T  17611571 aaaatatcatcaaactcataggcaaacgtaaatcttcatcatacaagcctagaaaattaaatttctttgaaaaaaatctcataaaaaatgataagatatt 17611670  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    | | || ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||| ||  ||||||||    
T  17611671 gacattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattatgtaattttgcc 17611770  T
Q  215 t 215  Q
    |    
T  17611771 t 17611771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 17985435 - 17985634
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| |||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||        ||||||||||||||||||||||||    
T  17985435 aaaaaatcatcaaactcataggcaatcgtaaatcttcatcatacaagcatagaaaatcaaatttcttt-gaaaaaatctcataaaaaatgataagatatt 17985533  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||| |||||||| |||||||||||        |||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  17985534 gtcattttataatataaaggattaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgctattttgcc 17985633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 7114010 - 7114208
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||        ||||||||||||||||||||||||    
T  7114010 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaagcctaaaaaatcaaatttatttgaaaaaaatctcataaaaaatgataagatatt 7114109  T
Q  116 gtctttctataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || |||||||||||||||||||| |||||        ||||| ||||||| |||||  |||||||||||||| ||||||||||||  ||||||||    
T  7114110 gtcattttataacataaaggactaaattgtgacaaaaaaaaataaaggacgaaagtgttatctaaaataaagttaatggactaattgtgtaattttgcc 7114208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 23 - 204
Target Start/End: Original strand, 25780043 - 25780224
Alignment:
Q  23 catcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtctttc 122  Q
    ||||||| ||||| ||||||||||||||||||||| ||||| |||||||||||||||||||        ||||||||||||||||||||||||||| ||     
T  25780043 catcaaattcatatgcaaacgtaaatcttcatcatacaagcttagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattt 25780142  T
Q  123 tataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    ||||||||||| ||||||||| ||||        ||||| ||||||| |||||| |||||||||||||| ||||||||||||    
T  25780143 tataacataaatgactaaatcatgacaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtg 25780224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 12139223 - 12139091
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||||| ||||||||||        ||||||||||||||||||||||||    
T  12139223 aaaaaatcatcaaactcatatgcaaacgcaaatcttcatcatacaagcctagaaaattaaatttctttgaaaaaaatctcataaaaaatgataagatatt 12139124  T
Q  116 gtctttctataacataaaggactaaatcgtgac 148  Q
    ||| || ||||||||||||||||||||||||||    
T  12139123 gtcattttataacataaaggactaaatcgtgac 12139091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 17611517 - 17611424
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||||||||||||||||||||||||||        |||||| ||||||| ||||||||||||||||||||| ||||||||||||  |||||||||    
T  17611517 tataacataaaggactaaatcgtgacagaaaaaagataaaggacgaaagtgttacataaaataaagttaagggactaattgtgtaattttgcct 17611424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 12115146 - 12115024
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtcttt 121  Q
    ||||||| ||||||| |||| | ||||||||||||| | |||||||||||||||||||| ||        |||||||||||||||||| ||| | || ||    
T  12115146 tcatcaagctcatagacaaatgcaaatcttcatcatactagcctagaaaatcaaatttcatt-gaaaaaatctcataaaaaatgataaaatagtatcatt 12115048  T
Q  122 ctataacataaaggactaaatcgt 145  Q
     |||||||||||||| ||||||||    
T  12115047 ttataacataaaggattaaatcgt 12115024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 19897330 - 19897452
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtcttt 121  Q
    ||||||| ||||||| |||| | |||||| |||||| | |||||||||||||||||||| ||        |||||||||||||||||| ||| |||| ||    
T  19897330 tcatcaagctcatagacaaatgcaaatctacatcatactagcctagaaaatcaaatttcatt-aaaaaaatctcataaaaaatgataaaatagtgtcatt 19897428  T
Q  122 ctataacataaaggactaaatcgt 145  Q
     |||||||||||||| ||||||||    
T  19897429 ttataacataaaggattaaatcgt 19897452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 214
Target Start/End: Original strand, 2026973 - 2027065
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    |||||||||||||||||||| |||||        |||||| ||||||| ||||||||||||||||||||| ||||||||||||  ||||||||    
T  2026973 tataacataaaggactaaattgtgacaaagaaaagataaaggacgaaagtgttacataaaataaagttaagggactaattgtgtaattttgcc 2027065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 198
Target Start/End: Complemental strand, 4969555 - 4969380
Alignment:
Q  25 tcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcata-aaaaatgataagatattgtctttct 123  Q
    |||||||||||| |||||| ||||||||||||| | || | ||||||||||||||| ||        ||||||| ||||||||||| ||| |||| ||      
T  4969555 tcaaactcatagacaaacgcaaatcttcatcatactagtcaagaaaatcaaatttcatt-gaaaaaatctcatacaaaaatgataaaatagtgtcattta 4969457  T
Q  124 ataacataaaggactaaatcgtgac--nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggacta 198  Q
    |||||||||||||||||||||| ||         |||||| ||||||| |||||| |||||| ||||||||||||||    
T  4969456 ataacataaaggactaaatcgttacaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaaaggacta 4969380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 214
Target Start/End: Complemental strand, 40902419 - 40902327
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  40902419 tataacataaaggactaaatcgtgacaacaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 40902327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 30002303 - 30002221
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    ||||||||||||||||||||||||||        |||||| ||| ||| ||||||||||||||||||||| ||||||||||||    
T  30002303 tataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacataaaataaagttaagggactaattgtg 30002221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 12115205 - 12115298
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||||||||||||||||||||||| ||        |||||| |||||||||||||| |||||| ||||||| ||||||||||||  |||||||||    
T  12115205 tataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcct 12115298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 7113922 - 7113864
Alignment:
Q  157 ataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||||| ||||||| |||||| |||||||||||||| ||||||||||||  |||||||||    
T  7113922 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 7113864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 12139312 - 12139370
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  12139312 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 12139370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 217
Target Start/End: Complemental strand, 17985379 - 17985284
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgccttt 217  Q
    ||||||||||||||||||||||||||        |||||| ||||||| |||||| ||||||||||||||  |||||||||||  ||||| |||||    
T  17985379 tataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagagactaattgtgtaattttaccttt 17985284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 25779943 - 25779879
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctttatt 220  Q
    |||||| ||||||| |||||  |||||||||||||| ||||||||||||  |||||| |||||||    
T  25779943 gataaaggacgaaagtgttatctaaaataaagttaagggactaattgtgtaattttgtctttatt 25779879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 19897234 - 19897187
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgt 203  Q
    |||||| |||||||||||||| |||||| ||||||| |||||||||||    
T  19897234 gataaaggacgaaaatgttacctaaaattaagttaagggactaattgt 19897187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 123 - 220
Target Start/End: Original strand, 30563036 - 30563135
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn--gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctttatt 220  Q
    ||||||||||||||||||||||||||         ||||||  |||||| |||||| |||||||||||||| |||||||| |||  ||||||||| ||||    
T  30563036 tataacataaaggactaaatcgtgacaaaaaaaaagataaagaacgaaagtgttacctaaaataaagttaagggactaatcgtgtaattttgcctatatt 30563135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 40290076 - 40290129
Alignment:
Q  163 gacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctt 216  Q
    |||||||||||||| |||||| ||||||| ||||||||| ||  ||||||||||    
T  40290076 gacgaaaatgttacctaaaattaagttaagggactaattatgtaattttgcctt 40290129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 47193951 - 47194003
Alignment:
Q  92 tctcataaaaaatgataagatattgtctttctataacataaaggactaaatcg 144  Q
    |||||| ||||| |||||||||||||| ||  |||||||||| ||||||||||    
T  47193951 tctcattaaaaaagataagatattgtcatttaataacataaaagactaaatcg 47194003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 3e-54; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 40834135 - 40833934
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  40834135 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 40834036  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  40834035 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 40833936  T
Q  215 tt 216  Q
    ||    
T  40833935 tt 40833934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 18485806 - 18486012
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||        ||||||||||||||||||||||||    
T  18485806 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaagcatagaaaattaaatttctttgaaaaaaatctcataaaaaatgataagatatt 18485905  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||| ||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  18485906 gtcattttataagataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgctattttgcc 18486005  T
Q  215 tttatta 221  Q
    | |||||    
T  18486006 tatatta 18486012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 215 - 333
Target Start/End: Complemental strand, 43579655 - 43579537
Alignment:
Q  215 tttattaaatagacgtgttaaaaattagagttaactaaaatattannnnnnnatacggtttaaatacataccctcatttctcaatctctcacaccatttc 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43579655 tttattaaatagacgtgttaaaaattagagttaactaaaatattatttttttatacggtttaaatacataccctcatttctcaatctctcacaccatttc 43579556  T
Q  315 atctttccttcttacattt 333  Q
    |||||||||||||||||||    
T  43579555 atctttccttcttacattt 43579537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 20769911 - 20769712
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  20769911 aaaaaatcatcaaactcataggcaaacgcaaatcttcaacatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 20769812  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| | |||| |||||||||||||| ||||||||||||  ||||||||    
T  20769811 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtattacctaaaataaagttaagggactaattgtgtaattttgcc 20769712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 32936352 - 32936551
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| || || || ||||||||||||||||        ||||||||||||||||||||||||    
T  32936352 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacacgcatataaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 32936451  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  32936452 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 32936551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 7145737 - 7145532
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||        ||||||||||||||||||||||||    
T  7145737 aaaaaatcatcaaactcatatgcaaacgtaaatcttcatcatacaagcatagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 7145638  T
Q  116 gtctttctataacataaaggactaaatcgtgac------nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctatt 209  Q
    ||| || ||||||||||||||||||||||||||             |||||| ||||||| |||||| |||||||||||||| |||||||||||| ||||    
T  7145637 gtcattttataacataaaggactaaatcgtgacaaaaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgttatt 7145538  T
Q  210 ttgcct 215  Q
    ||||||    
T  7145537 ttgcct 7145532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 22 - 214
Target Start/End: Original strand, 2094725 - 2094918
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtcttt 121  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||||| ||    
T  2094725 tcatcaaactcgtaggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcatt 2094824  T
Q  122 ctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
     ||||| ||||||||||||||||||||        |||||| || |||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  2094825 ttataatataaaggactaaatcgtgacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 2094918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 30370657 - 30370856
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnn-tctcataaaaaatgataagatat 114  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||         | |||||||||||||||||||||    
T  30370657 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaagcatataaaatcaaatttctttgaaaaaaaatttcataaaaaatgataagatat 30370756  T
Q  115 tgtctttctataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    |||| || ||||||||||||||||||||||||||       |||||| ||||||| |||| | |||||||||||||| ||||||||||||  ||||||||    
T  30370757 tgtcattttataacataaaggactaaatcgtgacaaaaaaagataaaggacgaaagtgttgcctaaaataaagttaagggactaattgtgtaattttgcc 30370856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 22 - 203
Target Start/End: Original strand, 3539749 - 3539930
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtcttt 121  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||||| ||    
T  3539749 tcatcaaactcataggcaaacataaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcatt 3539848  T
Q  122 ctataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgt 203  Q
     ||||||||||||||||||||||||||        ||||| ||||||| |||||| ||||||||| |||   ||||||||||    
T  3539849 ttataacataaaggactaaatcgtgacaaaaaaaaataaaggacgaaagtgttacctaaaataaaattatgagactaattgt 3539930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 13600592 - 13600792
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  13600592 aaaaaatcatcaaactcataggcaaacgcaaatctttatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 13600691  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
     || || ||||||||||||||||||||||||||        |||||| ||||||| |||||| || |||||||||||  |||||||||||  ||||||||    
T  13600692 atcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctacaataaagttaagagactaattgtgtaattttgcc 13600791  T
Q  215 t 215  Q
    |    
T  13600792 t 13600792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 22 - 215
Target Start/End: Original strand, 35363136 - 35363336
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcata-----aaaaatgataagatattg 116  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||        |||||||     |||| |||||||||||||    
T  35363136 tcatcaaactcataggcaaacgtaaatcttcatcatacaagcctagaaagtcaaatttctttgaaaaaaatctcataaaattaaaactgataagatattg 35363235  T
Q  117 tctttctataacataaaggactaaatcgtgac--nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    || || ||||||||||||||||||||||||||         |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  35363236 tcattttataacataaaggactaaatcgtgacaaaaaagaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 35363335  T
Q  215 t 215  Q
    |    
T  35363336 t 35363336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 215 - 333
Target Start/End: Original strand, 43590278 - 43590396
Alignment:
Q  215 tttattaaatagacgtgttaaaaattagagttaactaaaatattannnnnnnatacggtttaaatacataccctcatttctcaatctctcacaccatttc 314  Q
    ||||||||||||| |  ||||||||||||||||| ||||||||||       ||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  43590278 tttattaaatagatgcattaaaaattagagttaattaaaatattatttttttatacggtttaaatacataccctcatttctcaatttctcacaccgtttc 43590377  T
Q  315 atctttccttcttacattt 333  Q
    |||||||||||||||||||    
T  43590378 atctttccttcttacattt 43590396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 216
Target Start/End: Original strand, 35362070 - 35362265
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcata-aaaaatgataagatattgtctt 120  Q
    ||||||||||||||| |||||  ||||||||||||| | |||||||||||||||||||| ||        ||||||| ||||||||||| ||| |||| |    
T  35362070 tcatcaaactcatagacaaacacaaatcttcatcatactagcctagaaaatcaaatttcatt-gaaaaaatctcatacaaaaatgataaaatagtgtcat 35362168  T
Q  121 tctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctt 216  Q
    | ||||||||||||||||||||||| ||        |||||| |||||||  ||||| |||||| ||||||| ||||||||||||  ||||||||||    
T  35362169 tttataacataaaggactaaatcgttacagaaaaaagataaaggacgaaagcgttacctaaaattaagttaagggactaattgtgtaattttgcctt 35362265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 27843189 - 27843023
Alignment:
Q  48 tcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtctttctataacataaaggactaaatcgtga 147  Q
    |||||||||| ||| |||||||||||||||||| ||        |||||||||||||||||| |||||||| || ||||||||||| ||||||||||| |    
T  27843189 tcttcatcatacaaacctagaaaatcaaatttcatt-ggaaaaatctcataaaaaatgataaaatattgtcattttataacataaaagactaaatcgtta 27843091  T
Q  148 c-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    |        |||||| |||||||||||||| |||||| ||||||| ||||||||| ||  ||||||||    
T  27843090 caaaaaaaagataaaggacgaaaatgttacctaaaattaagttaagggactaattatgtaattttgcc 27843023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 214
Target Start/End: Complemental strand, 25363205 - 25363016
Alignment:
Q  25 tcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcata-aaaaatgataagatattgtctttct 123  Q
    |||||||||||| |||||| ||||||||||||| | || | ||||||||||||||| ||        ||||| | ||||||||||| ||| |||| || |    
T  25363205 tcaaactcatagacaaacgcaaatcttcatcatactagtcaagaaaatcaaatttcatt-gaataaatctcaaacaaaaatgataaaatagtgtcatttt 25363107  T
Q  124 ataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    |||||||||||||||||||||| ||       |||||||||||||| |||||| |||||| ||||||| |||||  |||||  ||||||||    
T  25363106 ataacataaaggactaaatcgttacaaaaaaagataaatgacgaaagtgttacctaaaattaagttaagggactgtttgtgtaattttgcc 25363016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 132201 - 132324
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcata-aaaaatgataagatattgtctt 120  Q
    ||||||||||||||| |||||  ||||||||||||| | |||||||||||||||||||| ||        ||||||| ||||||||||| ||| |||| |    
T  132201 tcatcaaactcatagacaaacacaaatcttcatcatactagcctagaaaatcaaatttcatt-gaaaaaatctcatacaaaaatgataaaatagtgtcat 132299  T
Q  121 tctataacataaaggactaaatcgt 145  Q
    | |||||||||||||||||||||||    
T  132300 tttataacataaaggactaaatcgt 132324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 220
Target Start/End: Original strand, 15178942 - 15179141
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcata-aaaaatgataagatattgtctt 120  Q
    ||||||||||||||| |||||  ||||||||||||| | || | ||||||||||||||| ||        ||||||| ||||||||||| ||| |||| |    
T  15178942 tcatcaaactcatagacaaactcaaatcttcatcatactagtcaagaaaatcaaatttcatt-gaaaaaatctcatacaaaaatgataaaatagtgtcat 15179040  T
Q  121 tctataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctttat 219  Q
    | ||||||||||||||||||||||| |         |||||| ||||||| |||||| |||||| ||||||| ||||||||||||  ||||||||| |||    
T  15179041 tttataacataaaggactaaatcgttaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcctatat 15179140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 32994299 - 32994422
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcata-aaaaatgataagatattgtctt 120  Q
    ||||||||||||||| |||||| ||||||||||||| | || | ||||||||||||||| ||        ||||||| ||||||||||| ||| |||| |    
T  32994299 tcatcaaactcatagacaaacgcaaatcttcatcatactagtcaagaaaatcaaatttcatt-gaaaaaatctcatacaaaaatgataaaatagtgtcat 32994397  T
Q  121 tctataacataaaggactaaatcgt 145  Q
    | |||||||||||||||||||||||    
T  32994398 tttataacataaaggactaaatcgt 32994422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 333
Target Start/End: Complemental strand, 1060318 - 1060260
Alignment:
Q  275 taaatacataccctcatttctcaatctctcacaccatttcatctttccttcttacattt 333  Q
    ||||||||||||||||||||| ||||||||||| ||||| || ||||||||||||||||    
T  1060318 taaatacataccctcatttcttaatctctcacatcattttatgtttccttcttacattt 1060260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 123 - 220
Target Start/End: Complemental strand, 35363076 - 35362978
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnng-ataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctttatt 220  Q
    ||||||||||||||||||||||||||       | ||||| ||||||| |||||| |||||||||||||| ||||||||||||  |||||||| |||||    
T  35363076 tataacataaaggactaaatcgtgacaaaaaaaggataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgccattatt 35362978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 14274359 - 14274308
Alignment:
Q  92 tctcataaaaaatgataagatattgtctttctataacataaaggactaaatc 143  Q
    ||||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  14274359 tctcataaaaaataataagatattgtcattttataacataaaggactaaatc 14274308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 19558102 - 19558218
Alignment:
Q  99 aaaaatgataagatattgtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggact 197  Q
    ||||||||||| ||| |||| || ||||||||||||||||||||||| ||        |||||| ||||||| |||||| |||||| ||||||| |||||    
T  19558102 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacagaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggact 19558201  T
Q  198 aattgtgctattttgcc 214  Q
    |||||||  ||||||||    
T  19558202 aattgtgtaattttgcc 19558218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 215
Target Start/End: Complemental strand, 13600568 - 13600443
Alignment:
Q  94 tcataaaaaatgataag-atattgtctttctataacataaaggactaaatcgtgacnnnnnnn---gataaatgacgaaaatgttacataaaataaagtt 189  Q
    ||||||||||||||||  || ||||  || ||||||||||||||||||||||||||          |||||| ||||||| |||||| |||||||||| |    
T  13600568 tcataaaaaatgataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaaggt 13600469  T
Q  190 aaaggactaattgtgctattttgcct 215  Q
    |||||||||||||||  |||||||||    
T  13600468 aaaggactaattgtgtaattttgcct 13600443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 123 - 217
Target Start/End: Complemental strand, 32936298 - 32936203
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgccttt 217  Q
    ||||||||||||||||||||||||||        |||||| ||||||| |||||| ||||||||||||||  |||||||||||  |||||||||||    
T  32936298 tataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagtgactaattgtgtaattttgccttt 32936203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 220
Target Start/End: Complemental strand, 2094667 - 2094569
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctttatt 220  Q
    ||||||||||||||||||||||||||        |||||| ||| ||| |||||| |||||||||||||| ||| ||||||||  ||||||||||||||    
T  2094667 tataacataaaggactaaatcgtgacaaaaaaaagataaaggaccaaagtgttacctaaaataaagttaagggattaattgtgtaattttgcctttatt 2094569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 214
Target Start/End: Original strand, 7145762 - 7145884
Alignment:
Q  94 tcataaaaaatgataag-atattgtctttctataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaa 191  Q
    ||||||||||||||||  || ||||  || ||||||||||||||||||||||||||        |||||| |||||||||||||| ||||||||||||||    
T  7145762 tcataaaaaatgataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaa 7145861  T
Q  192 aggactaattgtgctattttgcc 214  Q
     ||| ||||| ||  ||||||||    
T  7145862 gggattaattatgtaattttgcc 7145884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 214
Target Start/End: Complemental strand, 18485751 - 18485659
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    |||||||||||||||||||| |||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  18485751 tataacataaaggactaaattgtgacaacaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 18485659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 214
Target Start/End: Complemental strand, 30370603 - 30370511
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||||||||||| ||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  30370603 tataacataaatgactaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 30370511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 214
Target Start/End: Original strand, 40834189 - 40834281
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    |||||||||||||||||||| |||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  40834189 tataacataaaggactaaattgtgacaaagaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 40834281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 37093738 - 37093790
Alignment:
Q  163 gacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||||||| |||||| |||||||||||||| ||||||||||||  |||||||||    
T  37093738 gacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 37093790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 3294443 - 3294396
Alignment:
Q  95 cataaaaaatgataagatattgtctttctataacataaaggactaaat 142  Q
    |||||||||| |||||||||| || || ||||||||||||||||||||    
T  3294443 cataaaaaataataagatattatcattttataacataaaggactaaat 3294396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 3539655 - 3539608
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgt 203  Q
    |||||| |||||||||||||| |||||||||||||| ||| |||||||    
T  3539655 gataaaggacgaaaatgttacctaaaataaagttaagggattaattgt 3539608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 20339214 - 20339155
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    |||||| ||||||| |||||| |||||||||||||| ||| ||||||||  |||||||||    
T  20339214 gataaaggacgaaagtgttacctaaaataaagttaagggattaattgtgtaattttgcct 20339155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 32458075 - 32458134
Alignment:
Q  157 ataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctt 216  Q
    ||||| || ||||||||||| |||||| ||||||| ||||||||||||  ||||||||||    
T  32458075 ataaaggatgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcctt 32458134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 32994442 - 32994501
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    |||||| ||||||| |||||| |||||| ||||||| ||||||||||||  |||||||||    
T  32994442 gataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 32994501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 33569035 - 33568984
Alignment:
Q  92 tctcataaaaaatgataagatattgtctttctataacataaaggactaaatc 143  Q
    |||||| |||||||||||||||||||| || ||||||||||| || ||||||    
T  33569035 tctcattaaaaatgataagatattgtcattttataacataaatgattaaatc 33568984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 42858555 - 42858598
Alignment:
Q  99 aaaaatgataagatattgtctttctataacataaaggactaaat 142  Q
    |||||||||||||||||| | || ||||||||||||||||||||    
T  42858555 aaaaatgataagatattgacattttataacataaaggactaaat 42858598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 38981783 - 38981835
Alignment:
Q  92 tctcataaaaaatgataagatattgtctttctataacataaaggactaaatcg 144  Q
    ||||||||||| ||||||| | ||||| || |||||||||| |||||||||||    
T  38981783 tctcataaaaattgataaggtgttgtcattttataacataagggactaaatcg 38981835  T

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Target: chr3 (Bit Score: 105; Significance: 2e-52; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 8851951 - 8852152
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||        ||||||||||||||||||||||||    
T  8851951 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcaaacaagcatagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 8852050  T
Q  116 gtctttctataacataaaggactaaatcgtgac--nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgc 213  Q
    ||| || ||||||||||||||||||||||||||         |||||| ||||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  8852051 gtcattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgctattttgc 8852150  T
Q  214 ct 215  Q
    ||    
T  8852151 ct 8852152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 21 - 218
Target Start/End: Complemental strand, 55009291 - 55009095
Alignment:
Q  21 atcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtctt 120  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||        |||||||||||||||| |||||||||  |    
T  55009291 atcatcaaactcataggtaaacgtaaatcttcatcatacaagcatagaaaatcaaatttctttgaaaaaaatctcataaaaaatgattagatattgttat 55009192  T
Q  121 tctataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgccttta 218  Q
    | ||||||||||||||||||||||||||       |||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||    
T  55009191 tttataacataaaggactaaatcgtgacaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaa-gactaattgtgctattttgccttta 55009095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 22316919 - 22316719
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  22316919 aaaaaatcatcaaactcgtaggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 22316820  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  22316819 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 22316720  T
Q  215 t 215  Q
    |    
T  22316719 t 22316719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 37513290 - 37513090
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  37513290 aaaaaatcatcaaactcataggcaaatgtaaatcttcatcatacaagcctagaaaatcaaatttctttaaaaaaaatctcataaaaaatgataagatatt 37513191  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||| ||| |||||| |||||||||||||| |||||||||||| |||||||||    
T  37513190 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaagggactaattgtgttattttgcc 37513091  T
Q  215 t 215  Q
    |    
T  37513090 t 37513090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 22 - 220
Target Start/End: Complemental strand, 22975538 - 22975339
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtcttt 121  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||| ||||||||||||| ||    
T  22975538 tcatcaaactcgtaggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaataataagatattgtcatt 22975439  T
Q  122 ctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctttatt 220  Q
     ||||||||||||||||||||||||||        |||||||||| |||||||||| |||||||||||||| ||||||||||||  ||||||||| ||||    
T  22975438 ttataacataaaggactaaatcgtgacaaaaaaaagataaatgacaaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcctatatt 22975339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 28829951 - 28829753
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||| ||||| ||||||||||||| ||||| |||||||| ||||||||||        ||||||||||||||||||||||||    
T  28829951 aaaaaatcatcaaactcataggtaaacgcaaatcttcatcatacaagcttagaaaattaaatttctttgaaaaaaatctcataaaaaatgataagatatt 28829852  T
Q  116 gtctttctataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||       |||||| ||||||| |||||| |||||||||||||||| ||||||||||  ||||||||    
T  28829851 gtcattttataacataaaggactaaatcgtgacaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaagaactaattgtgtaattttgcc 28829753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 23043336 - 23043535
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  23043336 aaaaaatcatcaaactcataggcaaacgcaaaccttcatcatacaagcctagaaaatcaaatttcttt-gaaaaaatctcataaaaaatgataagatatt 23043434  T
Q  116 gtctttctataacataaaggactaaatcgtgac--nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgc 213  Q
    ||| || ||||||||||||||||||||||||||          ||||| |||||||||||||| |||||||||||||||||||||||||||  |||||||    
T  23043435 gtcattttataacataaaggactaaatcgtgacaaaaaaataaataaaggacgaaaatgttacctaaaataaagttaaaggactaattgtgtaattttgc 23043534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 16 - 204
Target Start/End: Complemental strand, 36229962 - 36229773
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||| ||||||||||||||||||||| || || || ||||||||||||||||        ||||||||||||||||||||||||    
T  36229962 aaaaaatcatcaaactcataagcaaacgtaaatcttcatcatacacgcatataaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 36229863  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||    
T  36229862 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtg 36229773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 49621177 - 49620977
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||        |||||||||||||||| |||||||    
T  49621177 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaagcatataaaatcaaatttctttgaaaaaaatctcataaaaaatgatgagatatt 49621078  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| |||||| ||||||||||||| |||| |||| |||  ||||||||    
T  49621077 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttagaggattaatcgtgtaattttgcc 49620978  T
Q  215 t 215  Q
    |    
T  49620977 t 49620977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 16 - 221
Target Start/End: Complemental strand, 25847644 - 25847438
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| || || || | ||||||||||||||        ||||||||||||||||||||||||    
T  25847644 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacacgcatatagaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 25847545  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        ||||||  |||||| |||||| ||||||||| |||| |||||||||||   ||||||||    
T  25847544 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtgttacctaaaataaaattaagggactaattgtataattttgcc 25847445  T
Q  215 tttatta 221  Q
    || ||||    
T  25847444 ttgatta 25847438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 49984857 - 49985038
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||| |||||||||||||| |||||||| ||| | |||||||||||||||||||        ||||||||||||||||||||||||    
T  49984857 aaaaaatcatcaaactcacaggcaaacgtaaatattcatcatacaaacttagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 49984956  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggac 196  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||    
T  49984957 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaagggac 49985038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 24 - 213
Target Start/End: Original strand, 48433957 - 48434147
Alignment:
Q  24 atcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtctttct 123  Q
    |||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||        ||||||||||||||||||| ||||||| || |    
T  48433957 atcaaactcataggcaaacgcaaatcttcatcatacaaacctagaaaatcaaatttcttt-gaaaaaatctcataaaaaatgataagctattgtcatttt 48434055  T
Q  124 ataacataaaggactaaatcgtgac--nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgc 213  Q
    |||||||||||||||||||||||||          ||||| ||||||| |||||| |||||||||||||| ||||||||||||  |||||||    
T  48434056 ataacataaaggactaaatcgtgacaaaaaaatatataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgc 48434147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 201
Target Start/End: Original strand, 49711552 - 49711731
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttcttt-cnnnnnnntctcataaaaaatgataagatattgtctt 120  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||         ||||||||||||||||||||||||||| |    
T  49711552 tcatcaaactcataggcaaacgtaaatcttcatcatacaagcctaaaaaatcaaatttctttaaaaaaaaatctcataaaaaatgataagatattgtcat 49711651  T
Q  121 tctataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaatt 201  Q
    | ||||||| |||||||||||| |||||        ||||  ||||||| |||||| |||||||||||||| |||||||||    
T  49711652 t-tataacaaaaaggactaaattgtgacaaaaaaaaataacggacgaaagtgttacctaaaataaagttaagggactaatt 49711731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 16 - 138
Target Start/End: Original strand, 9296528 - 9296650
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||        ||||||||||||||||||||||||    
T  9296528 aaaaaatcatcaaactcacaggcaaacgtaaatcttcatcatacatgcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 9296627  T
Q  116 gtctttctataacataaaggact 138  Q
    ||| || ||||||||||||||||    
T  9296628 gtcattttataacataaaggact 9296650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 11121482 - 11121282
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||| ||||||||||  ||||||||||||||||||| ||||| ||||||||||||||||||||       ||||||||||| ||||||||||||    
T  11121482 aaaaaatcataaaactcatagttaaacgtaaatcttcatcatacaagcatagaaaatcaaatttctttc--aaaaatctcataaaaattgataagatatt 11121385  T
Q  116 gtctttctataacataaaggactaaatcgtgac---nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttg 212  Q
    ||| || ||||||||  ||||||||| ||||||           ||||| ||||||| |||| | |||||||||||||| ||||||||||||||||||||    
T  11121384 gtcattttataacatttaggactaaaccgtgacaaaaaaaaaatataaaggacgaaagtgttgcctaaaataaagttaagggactaattgtgctattttg 11121285  T
Q  213 cct 215  Q
    |||    
T  11121284 cct 11121282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 224
Target Start/End: Complemental strand, 17574569 - 17574363
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| |||||||||||||||| |||||| |||| ||||||||  ||||||| ||||||||||| | ||        |||||||||||||||||| |||||    
T  17574569 aaaaaatcatcaaactcatagacaaacgcaaattttcatcataaaagcctaaaaaatcaaattgcatt--gaaaaatctcataaaaaatgataaaatatt 17574472  T
Q  116 gtctttctataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||  || ||||||||||||||||||||||| ||        ||||| ||||||| |||||| |||||| ||||||| |||| |||||||  |||||||||    
T  17574471 gtaattttataacataaaggactaaatcgtaacaaaaaaaaataaaggacgaaagtgttacctaaaattaagttaatggacgaattgtgtaattttgcct 17574372  T
Q  216 ttattaaat 224  Q
    ||| |||||    
T  17574371 ttaataaat 17574363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 204
Target Start/End: Complemental strand, 44506239 - 44506056
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcata-aaaaatgataagatattgtctt 120  Q
    ||||||||||||||| |||||  ||||||||||||| | |||||||||||||||||||| ||        ||||||| ||||||||||| ||| |||| |    
T  44506239 tcatcaaactcatagacaaacacaaatcttcatcatactagcctagaaaatcaaatttcatt-gaaaaaatctcatacaaaaatgataaaatagtgtcat 44506141  T
Q  121 tctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    | ||||||||||||||||||||||| ||        |||||| ||||||| |||||| |||||| ||||||| ||| ||||||||    
T  44506140 tttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggattaattgtg 44506056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 3612749 - 3612807
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttc 80  Q
    ||||||||||||||| |||||| ||||||||||||| | ||||||||||||||||||||    
T  3612749 tcatcaaactcatagacaaacgcaaatcttcatcatactagcctagaaaatcaaatttc 3612807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 8851896 - 8851803
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  |||||||||    
T  8851896 tataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 8851803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 214
Target Start/End: Original strand, 37513344 - 37513436
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  37513344 tataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 37513436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 215
Target Start/End: Original strand, 25847668 - 25847791
Alignment:
Q  94 tcataaaaaatgataag-atattgtctttctataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaa 191  Q
    ||||||||||||||||  || ||||  || ||||||||||||||||||||||||||        |||||| ||||||| |||||| ||||||||| ||||    
T  25847668 tcataaaaaatgataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaa 25847767  T
Q  192 aggactaattgtgctattttgcct 215  Q
     ||||||||||||  |||||||||    
T  25847768 gggactaattgtgtaattttgcct 25847791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 11121535 - 11121618
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn--gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    ||||||||||||||||||||||||||         |||||| ||||||| |||||| |||||||||||||| ||||||||||||    
T  11121535 tataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtg 11121618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 214
Target Start/End: Original strand, 22316973 - 22317065
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| |||||||| |||  ||||||||    
T  22316973 tataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaatcgtgtaattttgcc 22317065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 214
Target Start/End: Original strand, 49621232 - 49621324
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||||| ||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  49621232 tataatataaaggactaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 49621324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 49711492 - 49711400
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||||||||||| |||||||||||||        |||||| |||| || |||||| |||||||||||||| ||||||||||||  |||||||||    
T  49711492 tataacataaatgactaaatcgtgataaaaaaagataaaggacgtaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 49711400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 33491660 - 33491595
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctttatta 221  Q
    |||||| ||||||| |||||| |||||||||||||| | ||||||||||  |||||||||| ||||    
T  33491660 gataaaggacgaaactgttacctaaaataaagttaaggaactaattgtgtcattttgccttaatta 33491595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 9296474 - 9296393
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    ||||||||| | ||||||||||||||        ||||| ||||||| |||||| |||||||||||||| ||||||||||||    
T  9296474 tataacatagatgactaaatcgtgacaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtg 9296393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 35850872 - 35850924
Alignment:
Q  92 tctcataaaaaatgataagatattgtctttctataacataaaggactaaatcg 144  Q
    ||||||||||| ||||||| ||||||| || ||||||||||| ||||||||||    
T  35850872 tctcataaaaagtgataaggtattgtcattttataacataaaagactaaatcg 35850924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 55009386 - 55009434
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    |||||| ||||||| |||||| |||||||||||||| ||||||||||||    
T  55009386 gataaaggacgaaagtgttacttaaaataaagttaagggactaattgtg 55009434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 204
Target Start/End: Complemental strand, 3612652 - 3612605
Alignment:
Q  157 ataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    ||||| |||||||||||||| |||||| ||||||| ||||||||||||    
T  3612652 ataaaggacgaaaatgttacctaaaattaagttaagggactaattgtg 3612605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 22975633 - 22975680
Alignment:
Q  157 ataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    ||||| ||||||| |||||| |||||||||||||| ||||||||||||    
T  22975633 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtg 22975680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 28830040 - 28830099
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    |||||| ||||||| |||||  |||||||||||||| ||||||||||||  |||||||||    
T  28830040 gataaaggacgaaagtgttagctaaaataaagttaagggactaattgtgtaattttgcct 28830099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 36230016 - 36230099
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn--gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtg 204  Q
    ||||||||||||||||||||||||||         |||||| ||||||| |||||| |||||||||||||| ||| ||||||||    
T  36230016 tataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggattaattgtg 36230099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 33491692 - 33491750
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    |||||| ||||||| |||||| ||||||||||||||  |||||||||||  ||||||||    
T  33491692 gataaaggacgaaagtgttacctaaaataaagttaagagactaattgtgtaattttgcc 33491750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 48433856 - 48433810
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattg 202  Q
    |||||| ||||||| |||||| |||||||||||||| ||||||||||    
T  48433856 gataaaggacgaaagtgttacctaaaataaagttaagggactaattg 48433810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 1342002 - 1341957
Alignment:
Q  99 aaaaatgataagatattgtctttctataacataaaggactaaatcg 144  Q
    |||||||||||||||||||| || || ||||||||||| |||||||    
T  1342002 aaaaatgataagatattgtcattttaaaacataaaggaataaatcg 1341957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 12012831 - 12012782
Alignment:
Q  93 ctcataaaaaatgataagatattgtctttctataacataaaggactaaat 142  Q
    ||||||||||||||||| |||||| | || ||||||||||| ||||||||    
T  12012831 ctcataaaaaatgataaaatattgacattttataacataaaagactaaat 12012782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 44506332 - 44506389
Alignment:
Q  157 ataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||||| |||||||||||||| |||||| ||||||| ||| ||||||||  ||||||||    
T  44506332 ataaaggacgaaaatgttacctaaaattaagttaagggattaattgtgtaattttgcc 44506389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 5e-50; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 33595518 - 33595320
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  33595518 aaaaaatcatcaaactcataggcaaacataaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 33595419  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgc 213  Q
    ||| || ||||||||||||||||||||||||||        ||||||  ||||||||||||| |||||||||||||| ||||||||||||  |||||||    
T  33595418 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgc 33595320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 3218288 - 3218487
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        |||||| |||||||||||||||||    
T  3218288 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcat-aaaaatgataagatatt 3218386  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  3218387 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 3218486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 4243122 - 4242922
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||        ||||||||||||||||||||||||    
T  4243122 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaaatctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 4243023  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| |||||| ||||||||| |||||||||||||||||  ||||||||    
T  4243022 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaaaggactaattgtgtaattttgcc 4242923  T
Q  215 t 215  Q
    |    
T  4242922 t 4242922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 224
Target Start/End: Original strand, 23068844 - 23069051
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||| ||||||||||||||||||| || || || ||||||||||||||||        ||||||||||||||||||||||||    
T  23068844 aaaaaatcatcaaactcataggaaaacgtaaatcttcatcatacacgcatataaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 23068943  T
Q  116 gtctttctataacataaaggactaaatcgtgacnnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||| || |||||||||||| |||||||||||||       |||||||||||||| |||||| ||||||||||||||  |||||||||||  |||||||||    
T  23068944 gtcattttataacataaag-actaaatcgtgacaaaaaaagataaatgacgaaagtgttacctaaaataaagttaagagactaattgtgtaattttgcct 23069042  T
Q  216 ttattaaat 224  Q
    |||| ||||    
T  23069043 ttataaaat 23069051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 6755116 - 6754984
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  6755116 aaaaaatcatcaaactcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 6755017  T
Q  116 gtctttctataacataaaggactaaatcgtgac 148  Q
    ||| || ||||||||||||||||||||||||||    
T  6755016 gtcattttataacataaaggactaaatcgtgac 6754984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 3922685 - 3922884
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| |||||||||||||||||||||||||||| |||||||| || || || ||||||||||||||||        ||||||||||||||||||||||||    
T  3922685 aaaaaatcatcaaactcataggcaaacgtaaattttcatcatacacgcatataaaatcaaatttctttgaaaaacatctcataaaaaatgataagatatt 3922784  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  3922785 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 3922884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 16 - 203
Target Start/End: Complemental strand, 14763517 - 14763329
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| |||||||||||||   ||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  14763517 aaaaaatcatcaaactcaatagcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatatt 14763418  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgt 203  Q
    ||| || ||||||||||||||||||| ||||||        ||||||  |||||| |||||| |||||||||||||| ||||| |||||    
T  14763417 gtcattttataacataaaggactaaaccgtgacaaaaaaaagataaagtacgaaagtgttacctaaaataaagttaagggactgattgt 14763329  T

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Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 217
Target Start/End: Complemental strand, 23068788 - 23068693
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgccttt 217  Q
    ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  |||||||||||    
T  23068788 tataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgccttt 23068693  T

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Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 33595573 - 33595666
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||||||||||||||||||||||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  |||||||||    
T  33595573 tataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 33595666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 123 - 217
Target Start/End: Complemental strand, 3922631 - 3922536
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgccttt 217  Q
    |||||||||||||||||| |||||||        |||||| ||||||| |||||| |||||||||||||| ||||||||||||  |||||||||||    
T  3922631 tataacataaaggactaattcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgccttt 3922536  T

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Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 4243176 - 4243269
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||||||||||||||||||||||||||        |||||| ||| ||| |||||| |||||||||||||| ||||||||||||  |||||||||    
T  4243176 tataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 4243269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 14763595 - 14763659
Alignment:
Q  156 gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcctttatt 220  Q
    |||||| ||||||| | |||| |||||||||||||| ||||||||||||  ||||||||||||||    
T  14763595 gataaaggacgaaagtcttacctaaaataaagttaagggactaattgtgtaattttgcctttatt 14763659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 214
Target Start/End: Original strand, 6755170 - 6755262
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||||||||||||||||||||||||||        ||||||  |||||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  6755170 tataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 6755262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 3218243 - 3218152
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnnga-taaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgc 213  Q
    ||||||||||||||||||||||||||        | |||| ||||||| |||||| |||||||||||||| ||||||||||||  |||||||    
T  3218243 tataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgc 3218152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 20491722 - 20491766
Alignment:
Q  100 aaaatgataagatattgtctttctataacataaaggactaaatcg 144  Q
    ||||||||||||||||||| || ||||||||||| || |||||||    
T  20491722 aaaatgataagatattgtcattttataacataaatgattaaatcg 20491766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 137062 - 137260
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||| ||||||||||||||||||||||||| ||||| || ||||||||||||||||        ||||  ||||||||||||||||||    
T  137062 aaaaaatcatcaaacttataggcaaacgtaaatcttcatcatacaagcatataaaatcaaatttctttgaaaaaaatctc--aaaaaatgataagatatt 137159  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| |||||| ||||||||||| || ||||||||| ||  ||||||||    
T  137160 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagtaaatggactaattatgtaattttgcc 137259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 137008 - 136915
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||||||||||||||||||||||||||        |||||| |||||||||||||| |||||||||||||| ||||||||||||  |||||||||    
T  137008 tataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcct 136915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 330343 - 330541
Alignment:
Q  16 aaaatatcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatatt 115  Q
    |||| ||||||||||| ||||||||||||||||||||||||| ||||| || ||||||||||||||||        ||||  ||||||||||||||||||    
T  330343 aaaaaatcatcaaacttataggcaaacgtaaatcttcatcatacaagcatataaaatcaaatttctttgaaaaaaatctc--aaaaaatgataagatatt 330440  T
Q  116 gtctttctataacataaaggactaaatcgtgac-nnnnnnngataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||| || ||||||||||||||||||||||||||        |||||| ||||||| |||||| ||||||||||| || ||||||||| ||  ||||||||    
T  330441 gtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagtaaatggactaattatgtaattttgcc 330540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 330289 - 330196
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||||||||||||||||||||||||||        |||||| |||||||||||||| |||||||||||||| ||||||||||||  |||||||||    
T  330289 tataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcct 330196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 12790 - 12667
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcata-aaaaatgataagatattgtctt 120  Q
    ||||||||||||||| |||||| ||||||||||||| | || | ||||||||||||||| ||        ||||||| ||||||||||| ||| |||| |    
T  12790 tcatcaaactcatagacaaacgcaaatcttcatcatactagtcaagaaaatcaaatttcatt-gaaaaaatctcatacaaaaatgataaaatagtgtcat 12692  T
Q  121 tctataacataaaggactaaatcgt 145  Q
    | |||||||||||||||||||||||    
T  12691 tttataacataaaggactaaatcgt 12667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 12850 - 12943
Alignment:
Q  123 tataacataaaggactaaatcgtgacnnnnnnn-gataaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcct 215  Q
    ||||||||||||||||||||||| ||        |||||| |||||||||||||  |||||| ||||||| ||||||||||||  |||||||||    
T  12850 tataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttatctaaaattaagttaagggactaattgtgtaattttgcct 12943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 12223 - 12282
Alignment:
Q  158 taaatgacgaaaatgttacataaaataaagttaaaggactaattgtgctattttgccttt 217  Q
    |||| ||||||| |||||| |||||| ||||||| ||||||||||||  |||||||||||    
T  12223 taaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccttt 12282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 11990 - 11940
Alignment:
Q  164 acgaaaatgttacataaaataaagttaaaggactaattgtgctattttgcc 214  Q
    ||||||||||||| |||||| ||||||| ||||||||||||  ||||||||    
T  11990 acgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcc 11940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1577 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1577
Description:

Target: scaffold1577; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 1025 - 1150
Alignment:
Q  22 tcatcaaactcataggcaaacgtaaatcttcatcattcaagcctagaaaatcaaatttctttcnnnnnnntctcataaaaaatgataagatattgtcttt 121  Q
    |||||||  |||||| |||||| ||||||| ||| | ||| |||||||||||| ||||| ||        ||||||||||||| |||| |||| ||| ||    
T  1025 tcatcaatttcatagacaaacgcaaatctttatcgtacaaccctagaaaatcacatttcatt-gaaaaaatctcataaaaaataataaaatatagtcatt 1123  T
Q  122 ctataacataaaggactaaatcgtgac 148  Q
     |||| |||||| ||||||||||||||    
T  1124 ttatatcataaaagactaaatcgtgac 1150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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