View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2517_high_7 (Length: 369)
Name: NF2517_high_7
Description: NF2517
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2517_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 55 - 351
Target Start/End: Complemental strand, 7292091 - 7291796
Alignment:
| Q |
55 |
ttttggattgtgggaaaagaatttatgcattattttcattcattcttctagttacttctatattagcctattagaccttcctaaagaagaaagactatat |
154 |
Q |
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| T |
7292091 |
ttttggagcgtgggaaaagaatttatgcattattttcattcattcttctagttacttctatattagcctattagaccttcctaaaaaa-aaagactatat |
7291993 |
T |
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| Q |
155 |
aagtctgtctattaagatttaagacgattagaattacaaacatcaaaatctgatgcacgacgaagctatgaaaccctaaaatcacagaagaagnnnnnnn |
254 |
Q |
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| T |
7291992 |
aagtctgtctattaagatttaagacgattagaattacaaacatcaaaatctgatgcacgacgaagctatgaaaccctaaaataacagaagaagaaaaaaa |
7291893 |
T |
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| Q |
255 |
ncaacaaggaaaagagaaacagtaaccatgccgtgatgacgcgtaatcgttgttgcatgatgggggaagcaactacagagtcgctgtgcacggttct |
351 |
Q |
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| T |
7291892 |
acaacaaggaaaagagaaacagtaaccatgccatgatgacgcgtaatcgttgttgcatgatggcggaagcaactacagagtcgctgtgcacggttct |
7291796 |
T |
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