View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2517_low_13 (Length: 227)

Name: NF2517_low_13
Description: NF2517
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2517_low_13
NF2517_low_13
[»] chr7 (53 HSPs)
chr7 (4-117)||(8941042-8941155)
chr7 (2-117)||(38897709-38897824)
chr7 (2-104)||(8469121-8469223)
chr7 (2-117)||(16214250-16214365)
chr7 (2-117)||(11972921-11973036)
chr7 (2-117)||(14269245-14269360)
chr7 (2-117)||(15081323-15081438)
chr7 (11-118)||(21189086-21189193)
chr7 (27-100)||(23461791-23461864)
chr7 (31-117)||(14269467-14269553)
chr7 (31-117)||(14269660-14269746)
chr7 (33-112)||(16108394-16108473)
chr7 (31-117)||(14948826-14948912)
chr7 (31-117)||(15376417-15376503)
chr7 (31-117)||(16232893-16232979)
chr7 (31-117)||(16410431-16410517)
chr7 (31-117)||(20384827-20384913)
chr7 (31-105)||(25926833-25926907)
chr7 (31-117)||(27217233-27217319)
chr7 (31-117)||(32125863-32125949)
chr7 (2-59)||(45846926-45846983)
chr7 (33-117)||(11303620-11303704)
chr7 (33-117)||(23664658-23664742)
chr7 (31-117)||(456694-456780)
chr7 (31-117)||(15081545-15081631)
chr7 (31-105)||(18431096-18431170)
chr7 (37-117)||(13869721-13869801)
chr7 (33-117)||(29796983-29797067)
chr7 (33-117)||(29800802-29800886)
chr7 (31-117)||(16214057-16214143)
chr7 (35-113)||(17985092-17985170)
chr7 (31-117)||(18640644-18640730)
chr7 (31-117)||(24702601-24702687)
chr7 (31-117)||(24705048-24705134)
chr7 (31-117)||(26355685-26355771)
chr7 (31-117)||(26358137-26358223)
chr7 (31-117)||(41523290-41523376)
chr7 (31-117)||(41525752-41525838)
chr7 (31-117)||(8940652-8940742)
chr7 (31-112)||(10501097-10501178)
chr7 (34-118)||(21189302-21189386)
chr7 (31-117)||(13918106-13918193)
chr7 (31-117)||(1856933-1857018)
chr7 (31-117)||(8940849-8940934)
chr7 (31-117)||(18627938-18628024)
chr7 (31-117)||(45847358-45847444)
chr7 (31-117)||(14156782-14156864)
chr7 (34-117)||(14156592-14156675)
chr7 (34-117)||(10500934-10501017)
chr7 (174-227)||(8946370-8946425)
chr7 (30-104)||(11310141-11310214)
chr7 (68-100)||(20110747-20110779)
chr7 (184-227)||(15739554-15739599)
[»] chr5 (30 HSPs)
chr5 (2-118)||(2154113-2154229)
chr5 (2-117)||(32028591-32028706)
chr5 (2-117)||(20917328-20917443)
chr5 (2-117)||(29330548-29330663)
chr5 (2-117)||(17516452-17516567)
chr5 (2-110)||(20901402-20901510)
chr5 (2-117)||(295756-295871)
chr5 (31-117)||(32028205-32028291)
chr5 (33-117)||(17516869-17516953)
chr5 (31-117)||(10732644-10732730)
chr5 (31-117)||(20909384-20909470)
chr5 (31-117)||(20917550-20917636)
chr5 (31-117)||(29330355-29330441)
chr5 (31-117)||(29346352-29346438)
chr5 (31-117)||(29348825-29348911)
chr5 (31-117)||(29351298-29351384)
chr5 (31-112)||(32027823-32027904)
chr5 (34-117)||(37804609-37804692)
chr5 (31-105)||(2154335-2154409)
chr5 (31-117)||(39245508-39245594)
chr5 (31-104)||(264472-264545)
chr5 (31-112)||(20901624-20901705)
chr5 (31-104)||(42245069-42245142)
chr5 (37-117)||(39363757-39363837)
chr5 (31-117)||(295978-296064)
chr5 (31-117)||(32028398-32028484)
chr5 (31-110)||(23064893-23064972)
chr5 (37-112)||(38619814-38619889)
chr5 (31-117)||(17516674-17516760)
chr5 (31-117)||(32028011-32028097)
[»] chr4 (42 HSPs)
chr4 (2-117)||(18214685-18214800)
chr4 (2-117)||(52872554-52872669)
chr4 (2-117)||(11929-12044)
chr4 (2-117)||(3515573-3515688)
chr4 (2-117)||(52313320-52313435)
chr4 (8-117)||(19617554-19617663)
chr4 (2-105)||(12778358-12778460)
chr4 (2-117)||(362939-363054)
chr4 (2-117)||(14970188-14970303)
chr4 (2-117)||(19858144-19858259)
chr4 (2-89)||(15489630-15489717)
chr4 (31-112)||(52313132-52313213)
chr4 (31-117)||(3515380-3515466)
chr4 (2-76)||(14745857-14745931)
chr4 (31-117)||(52312934-52313020)
chr4 (33-117)||(15534554-15534638)
chr4 (31-117)||(362746-362832)
chr4 (31-117)||(7640890-7640976)
chr4 (31-117)||(14746022-14746108)
chr4 (31-117)||(14970410-14970496)
chr4 (31-117)||(15118056-15118142)
chr4 (39-117)||(19857951-19858029)
chr4 (31-117)||(29267726-29267812)
chr4 (31-105)||(52872776-52872850)
chr4 (33-117)||(362553-362637)
chr4 (33-117)||(36038243-36038327)
chr4 (33-117)||(49547479-49547563)
chr4 (31-117)||(1837223-1837309)
chr4 (34-117)||(15495880-15495963)
chr4 (31-117)||(14746215-14746301)
chr4 (31-117)||(44772787-44772873)
chr4 (31-117)||(50222043-50222129)
chr4 (31-117)||(19243073-19243159)
chr4 (31-105)||(30147300-30147374)
chr4 (31-117)||(44615661-44615747)
chr4 (2-55)||(15354999-15355052)
chr4 (33-117)||(14048950-14049034)
chr4 (33-117)||(19617772-19617856)
chr4 (30-100)||(14185525-14185595)
chr4 (31-89)||(18214907-18214965)
chr4 (34-97)||(22725431-22725494)
chr4 (68-117)||(15495721-15495770)
[»] chr3 (62 HSPs)
chr3 (2-117)||(24514049-24514164)
chr3 (2-117)||(20629673-20629788)
chr3 (2-117)||(38961319-38961434)
chr3 (2-118)||(16282239-16282355)
chr3 (2-105)||(55318785-55318888)
chr3 (2-97)||(8899418-8899513)
chr3 (10-117)||(17444253-17444360)
chr3 (3-117)||(13937455-13937569)
chr3 (2-117)||(12119328-12119443)
chr3 (2-117)||(27165818-27165933)
chr3 (2-117)||(46822827-46822942)
chr3 (5-117)||(10379700-10379812)
chr3 (2-117)||(53300985-53301100)
chr3 (10-117)||(41124505-41124612)
chr3 (11-117)||(10557474-10557580)
chr3 (2-117)||(8500086-8500201)
chr3 (31-117)||(10247427-10247513)
chr3 (31-117)||(10557281-10557367)
chr3 (31-117)||(12567932-12568018)
chr3 (31-117)||(13544396-13544482)
chr3 (31-117)||(15465527-15465613)
chr3 (31-117)||(15977905-15977991)
chr3 (31-117)||(16453984-16454070)
chr3 (31-117)||(17444467-17444553)
chr3 (31-117)||(17463550-17463636)
chr3 (31-117)||(34159698-34159784)
chr3 (30-112)||(36528340-36528422)
chr3 (31-117)||(41124312-41124398)
chr3 (31-117)||(45606610-45606696)
chr3 (31-112)||(16282461-16282542)
chr3 (31-112)||(38961541-38961622)
chr3 (33-117)||(29544547-29544631)
chr3 (33-117)||(54521195-54521279)
chr3 (34-117)||(55319010-55319093)
chr3 (31-117)||(5223756-5223842)
chr3 (31-105)||(8499905-8499979)
chr3 (31-117)||(13153959-13154045)
chr3 (31-117)||(20629895-20629981)
chr3 (31-117)||(28848325-28848411)
chr3 (31-105)||(53301207-53301281)
chr3 (31-104)||(7781050-7781123)
chr3 (37-117)||(15412804-15412884)
chr3 (31-117)||(6468838-6468924)
chr3 (31-117)||(13151494-13151580)
chr3 (31-117)||(26054968-26055054)
chr3 (31-105)||(27165637-27165711)
chr3 (31-117)||(46822634-46822720)
chr3 (31-117)||(55476863-55476949)
chr3 (17-117)||(17393281-17393382)
chr3 (31-112)||(25229634-25229715)
chr3 (31-112)||(25237221-25237302)
chr3 (31-117)||(15007872-15007961)
chr3 (31-117)||(13436672-13436758)
chr3 (31-117)||(16358371-16358457)
chr3 (2-59)||(45220361-45220418)
chr3 (68-117)||(14567432-14567481)
chr3 (174-227)||(51857274-51857329)
chr3 (30-96)||(14567587-14567653)
chr3 (33-112)||(3264459-3264538)
chr3 (52-98)||(10555766-10555812)
chr3 (33-87)||(12305525-12305579)
chr3 (76-117)||(36528528-36528569)
[»] chr2 (53 HSPs)
chr2 (2-117)||(23706507-23706622)
chr2 (2-117)||(21154296-21154411)
chr2 (2-117)||(24368392-24368507)
chr2 (2-117)||(24529028-24529143)
chr2 (2-117)||(41523361-41523476)
chr2 (2-117)||(6726613-6726728)
chr2 (2-112)||(24682015-24682125)
chr2 (3-117)||(24918706-24918820)
chr2 (2-117)||(22106031-22106146)
chr2 (2-117)||(24671591-24671706)
chr2 (2-117)||(23932026-23932141)
chr2 (2-117)||(32214411-32214526)
chr2 (11-112)||(45027395-45027496)
chr2 (31-117)||(22105838-22105924)
chr2 (31-117)||(23135952-23136038)
chr2 (31-117)||(24368199-24368285)
chr2 (31-117)||(45027608-45027694)
chr2 (33-117)||(20261592-20261676)
chr2 (31-117)||(18809315-18809401)
chr2 (31-117)||(23711717-23711803)
chr2 (31-117)||(24897899-24897985)
chr2 (31-117)||(24900382-24900468)
chr2 (31-117)||(24902859-24902945)
chr2 (31-117)||(24905336-24905422)
chr2 (31-117)||(26508229-26508315)
chr2 (31-117)||(28577471-28577557)
chr2 (31-117)||(32214634-32214720)
chr2 (31-117)||(39682686-39682772)
chr2 (31-117)||(41523776-41523862)
chr2 (31-117)||(571770-571856)
chr2 (31-117)||(6726420-6726506)
chr2 (31-117)||(21154711-21154797)
chr2 (31-117)||(23706920-23707006)
chr2 (31-117)||(23931833-23931919)
chr2 (31-117)||(24907811-24907897)
chr2 (31-117)||(26505751-26505837)
chr2 (32-117)||(41523584-41523669)
chr2 (33-117)||(10684468-10684552)
chr2 (37-117)||(23131235-23131315)
chr2 (37-117)||(23133702-23133782)
chr2 (33-117)||(24681817-24681901)
chr2 (37-117)||(34402231-34402311)
chr2 (32-112)||(38967857-38967937)
chr2 (34-117)||(24529253-24529336)
chr2 (31-117)||(21154518-21154604)
chr2 (31-117)||(23709236-23709322)
chr2 (31-117)||(24671398-24671484)
chr2 (31-104)||(32039202-32039275)
chr2 (31-99)||(31345570-31345638)
chr2 (31-117)||(23706728-23706814)
chr2 (31-117)||(24642452-24642538)
chr2 (31-117)||(24918513-24918599)
chr2 (31-112)||(23709043-23709124)
[»] chr1 (31 HSPs)
chr1 (2-117)||(22050511-22050626)
chr1 (2-117)||(29298807-29298922)
chr1 (2-112)||(31613129-31613239)
chr1 (2-117)||(22122495-22122611)
chr1 (2-117)||(43543274-43543389)
chr1 (11-117)||(16274746-16274852)
chr1 (2-112)||(40129462-40129572)
chr1 (2-117)||(29777306-29777421)
chr1 (2-112)||(9044679-9044789)
chr1 (2-117)||(15859476-15859592)
chr1 (9-117)||(16401487-16401595)
chr1 (31-117)||(21841139-21841225)
chr1 (31-105)||(22122718-22122792)
chr1 (32-117)||(29298614-29298699)
chr1 (2-83)||(43630263-43630344)
chr1 (33-117)||(27161292-27161376)
chr1 (31-117)||(13989238-13989324)
chr1 (31-117)||(16274959-16275045)
chr1 (31-117)||(21922995-21923081)
chr1 (31-117)||(29777113-29777199)
chr1 (31-117)||(31612738-31612824)
chr1 (31-112)||(15859712-15859793)
chr1 (33-117)||(27161099-27161183)
chr1 (31-117)||(13227236-13227322)
chr1 (31-105)||(16362303-16362377)
chr1 (31-117)||(29535424-29535510)
chr1 (31-117)||(21474790-21474876)
chr1 (31-117)||(23593437-23593523)
chr1 (33-105)||(31612943-31613015)
chr1 (31-100)||(10812709-10812778)
chr1 (30-96)||(16401315-16401381)
[»] chr6 (46 HSPs)
chr6 (2-110)||(23992802-23992910)
chr6 (2-104)||(18914704-18914806)
chr6 (2-117)||(34963746-34963861)
chr6 (2-117)||(25535780-25535895)
chr6 (2-117)||(31630022-31630137)
chr6 (2-117)||(1598815-1598930)
chr6 (2-117)||(19005717-19005832)
chr6 (2-117)||(19847453-19847568)
chr6 (31-106)||(19847675-19847750)
chr6 (31-117)||(1598429-1598515)
chr6 (31-117)||(25689068-25689154)
chr6 (11-117)||(30676200-30676306)
chr6 (31-117)||(30676413-30676499)
chr6 (31-117)||(8055402-8055488)
chr6 (31-105)||(15892112-15892186)
chr6 (31-117)||(18334296-18334382)
chr6 (31-117)||(18914305-18914391)
chr6 (31-117)||(24422919-24423005)
chr6 (31-117)||(33862166-33862252)
chr6 (31-117)||(33864650-33864736)
chr6 (31-112)||(23415342-23415423)
chr6 (34-117)||(1871-1954)
chr6 (34-117)||(8830-8913)
chr6 (33-112)||(17883203-17883282)
chr6 (31-117)||(1598622-1598708)
chr6 (31-117)||(2290884-2290970)
chr6 (31-117)||(12742690-12742776)
chr6 (31-117)||(26924344-26924430)
chr6 (31-117)||(27557095-27557181)
chr6 (31-104)||(25737028-25737101)
chr6 (31-104)||(31630244-31630317)
chr6 (33-117)||(28289042-28289126)
chr6 (31-110)||(19858626-19858705)
chr6 (31-117)||(1540615-1540701)
chr6 (33-99)||(12942580-12942646)
chr6 (31-117)||(19005524-19005610)
chr6 (31-105)||(18914510-18914584)
chr6 (31-117)||(25688875-25688961)
chr6 (2-47)||(17028025-17028070)
chr6 (34-112)||(79-157)
chr6 (31-117)||(22782599-22782685)
chr6 (31-117)||(26924151-26924237)
chr6 (31-96)||(9020-9085)
chr6 (68-117)||(17377588-17377637)
chr6 (63-102)||(25689276-25689315)
chr6 (184-227)||(1576777-1576822)
[»] scaffold0001 (2 HSPs)
scaffold0001 (2-117)||(501630-501745)
scaffold0001 (32-101)||(501453-501522)
[»] chr8 (45 HSPs)
chr8 (2-117)||(32810269-32810384)
chr8 (2-112)||(19897085-19897195)
chr8 (2-117)||(15202467-15202582)
chr8 (2-117)||(24049176-24049291)
chr8 (2-117)||(27471898-27472013)
chr8 (2-117)||(38549294-38549409)
chr8 (2-117)||(32122294-32122409)
chr8 (2-117)||(1326606-1326721)
chr8 (2-117)||(16412797-16412912)
chr8 (2-105)||(19936390-19936492)
chr8 (2-117)||(20403845-20403960)
chr8 (2-117)||(11361082-11361198)
chr8 (2-117)||(15071126-15071241)
chr8 (31-117)||(16401243-16401328)
chr8 (31-117)||(19896887-19896973)
chr8 (31-112)||(19936611-19936692)
chr8 (32-117)||(45290252-45290337)
chr8 (31-117)||(1484774-1484860)
chr8 (31-117)||(4542077-4542163)
chr8 (31-117)||(5852996-5853082)
chr8 (31-117)||(14397444-14397530)
chr8 (31-117)||(14409148-14409234)
chr8 (31-117)||(14824147-14824233)
chr8 (31-117)||(15070933-15071019)
chr8 (31-117)||(15202689-15202775)
chr8 (31-117)||(24485747-24485833)
chr8 (31-112)||(16413019-16413100)
chr8 (31-117)||(15202882-15202968)
chr8 (31-105)||(16198279-16198353)
chr8 (31-117)||(18677768-18677854)
chr8 (31-117)||(20403652-20403738)
chr8 (31-117)||(24048983-24049069)
chr8 (31-104)||(20045899-20045972)
chr8 (31-112)||(27472120-27472201)
chr8 (31-112)||(38549708-38549789)
chr8 (33-117)||(16401437-16401521)
chr8 (31-117)||(19896694-19896780)
chr8 (31-117)||(22002125-22002211)
chr8 (31-104)||(16401628-16401701)
chr8 (37-117)||(4483653-4483733)
chr8 (31-118)||(38549515-38549602)
chr8 (31-117)||(32122101-32122187)
chr8 (2-56)||(37609883-37609936)
chr8 (71-117)||(45290385-45290431)
chr8 (68-117)||(25657893-25657942)
[»] scaffold1296 (2 HSPs)
scaffold1296 (3-117)||(1820-1934)
scaffold1296 (31-110)||(1634-1713)
[»] scaffold0747 (3 HSPs)
scaffold0747 (2-117)||(1274-1389)
scaffold0747 (31-117)||(962-1048)
scaffold0747 (49-117)||(1155-1223)
[»] scaffold0040 (3 HSPs)
scaffold0040 (3-117)||(43305-43419)
scaffold0040 (31-117)||(43112-43198)
scaffold0040 (80-112)||(13379-13411)
[»] scaffold0322 (1 HSPs)
scaffold0322 (2-117)||(18503-18618)
[»] scaffold0306 (4 HSPs)
scaffold0306 (2-105)||(15490-15592)
scaffold0306 (2-112)||(10821-10931)
scaffold0306 (31-112)||(11043-11124)
scaffold0306 (70-117)||(15295-15342)
[»] scaffold1792 (3 HSPs)
scaffold1792 (10-117)||(933-1040)
scaffold1792 (31-75)||(782-826)
scaffold1792 (34-117)||(580-663)
[»] scaffold0230 (5 HSPs)
scaffold0230 (10-117)||(22860-22967)
scaffold0230 (2-81)||(20685-20764)
scaffold0230 (31-117)||(14320-14406)
scaffold0230 (31-75)||(23074-23118)
scaffold0230 (34-117)||(23237-23320)
[»] scaffold0043 (3 HSPs)
scaffold0043 (2-117)||(10550-10665)
scaffold0043 (33-117)||(10164-10248)
scaffold0043 (33-112)||(10362-10441)
[»] scaffold0021 (1 HSPs)
scaffold0021 (2-111)||(398-507)
[»] scaffold0149 (2 HSPs)
scaffold0149 (10-117)||(30585-30692)
scaffold0149 (31-117)||(30392-30478)
[»] scaffold0716 (2 HSPs)
scaffold0716 (2-112)||(5265-5375)
scaffold0716 (31-117)||(5067-5153)
[»] scaffold0317 (2 HSPs)
scaffold0317 (2-112)||(6418-6527)
scaffold0317 (31-112)||(6639-6720)
[»] scaffold0574 (2 HSPs)
scaffold0574 (2-117)||(7017-7132)
scaffold0574 (31-117)||(6824-6910)
[»] scaffold0278 (3 HSPs)
scaffold0278 (2-117)||(8498-8613)
scaffold0278 (33-117)||(8112-8196)
scaffold0278 (31-117)||(8305-8391)
[»] scaffold0494 (1 HSPs)
scaffold0494 (11-117)||(207-313)
[»] scaffold0023 (3 HSPs)
scaffold0023 (2-117)||(16921-17036)
scaffold0023 (31-117)||(94783-94869)
scaffold0023 (31-104)||(17143-17216)
[»] scaffold0042 (2 HSPs)
scaffold0042 (31-112)||(75608-75689)
scaffold0042 (2-32)||(43329-43359)
[»] scaffold0695 (1 HSPs)
scaffold0695 (31-117)||(6319-6405)
[»] scaffold0134 (1 HSPs)
scaffold0134 (31-117)||(38194-38280)
[»] scaffold0064 (1 HSPs)
scaffold0064 (31-117)||(68334-68420)
[»] scaffold0051 (1 HSPs)
scaffold0051 (31-117)||(31576-31662)
[»] scaffold0363 (1 HSPs)
scaffold0363 (31-112)||(9619-9700)
[»] scaffold0200 (1 HSPs)
scaffold0200 (33-117)||(18026-18110)
[»] scaffold0029 (1 HSPs)
scaffold0029 (33-117)||(11662-11746)
[»] scaffold0138 (1 HSPs)
scaffold0138 (33-112)||(33549-33628)
[»] scaffold0074 (1 HSPs)
scaffold0074 (2-117)||(38330-38445)
[»] scaffold0741 (3 HSPs)
scaffold0741 (31-117)||(3620-3706)
scaffold0741 (31-117)||(3813-3899)
scaffold0741 (31-117)||(4006-4092)
[»] scaffold0444 (1 HSPs)
scaffold0444 (31-117)||(13765-13851)
[»] scaffold0293 (1 HSPs)
scaffold0293 (31-117)||(19792-19878)
[»] scaffold0117 (1 HSPs)
scaffold0117 (31-117)||(39705-39791)
[»] scaffold0044 (1 HSPs)
scaffold0044 (31-117)||(40772-40858)
[»] scaffold0028 (5 HSPs)
scaffold0028 (31-117)||(134583-134669)
scaffold0028 (31-117)||(137052-137138)
scaffold0028 (31-117)||(139521-139607)
scaffold0028 (31-117)||(141990-142076)
scaffold0028 (31-117)||(144459-144545)
[»] scaffold0711 (2 HSPs)
scaffold0711 (32-117)||(7395-7479)
scaffold0711 (31-104)||(7201-7274)
[»] scaffold0422 (1 HSPs)
scaffold0422 (33-117)||(3396-3480)
[»] scaffold0035 (1 HSPs)
scaffold0035 (2-50)||(107108-107156)
[»] scaffold0254 (1 HSPs)
scaffold0254 (31-117)||(21120-21207)
[»] scaffold0436 (1 HSPs)
scaffold0436 (31-117)||(8391-8477)
[»] scaffold0535 (1 HSPs)
scaffold0535 (4-47)||(7420-7463)
[»] scaffold0151 (2 HSPs)
scaffold0151 (71-117)||(36749-36795)
scaffold0151 (34-117)||(36905-36988)
[»] scaffold0053 (1 HSPs)
scaffold0053 (2-44)||(60575-60617)
[»] scaffold0022 (1 HSPs)
scaffold0022 (67-117)||(53611-53661)
[»] scaffold0014 (1 HSPs)
scaffold0014 (17-112)||(113394-113490)


Alignment Details
Target: chr7 (Bit Score: 102; Significance: 8e-51; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 8941155 - 8941042
Alignment:
Q  4 tttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggta 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8941155 tttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggta 8941056  T
Q  104 tgcatgttaacttt 117  Q
    || |||||| ||||    
T  8941055 tggatgttagcttt 8941042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 38897709 - 38897824
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  38897709 tttttctgatttttcttttcatctctgccccaaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaactcgaaagttgtagg 38897808  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  38897809 tatggatgttagcttt 38897824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 8469223 - 8469121
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  8469223 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccagaattggtcttagctgtaaacacgaaagttgtagg 8469124  T
Q  102 tat 104  Q
    |||    
T  8469123 tat 8469121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 16214365 - 16214250
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| || ||||||||    
T  16214365 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatttggtattgataggtccagaattggtcttaggtgtaaacacaaaggttgtagg 16214266  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  16214265 tatggatgttagcttt 16214250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 11973036 - 11972921
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  11973036 tttttctgatttttcttttcatctctgccccgaacttaaaatgaaatctggtattgataggtccagaatttgtcttaggtgtaaacacgaaagttgtagg 11972937  T
Q  102 tatgcatgttaacttt 117  Q
    |||  |||||| ||||    
T  11972936 tataaatgttagcttt 11972921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 14269245 - 14269360
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| || |||||||||||||||||||||| |||||||||||    
T  14269245 tttttctgatttttcttttcatctctgccctgaatttgaaatgaaatctggtattgattggtacagaattggtcttaggtgtaaacacaaaagttgtagg 14269344  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  14269345 tatggatgttagcttt 14269360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 15081323 - 15081438
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  15081323 tttttctgatttttcttttcatctatgccccgaatttgaaatgaaatatggtattgataggtccataattggtcttagaagtaaacacgaaagttgtagg 15081422  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  15081423 tatggatgttagcttt 15081438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 21189086 - 21189193
Alignment:
Q  11 tttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgt 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| || |    
T  21189086 tttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtcaacaattggtcttaggtgtaaacacgaaagttgtaggtatggatat 21189185  T
Q  111 taactttt 118  Q
    || |||||    
T  21189186 tagctttt 21189193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 23461791 - 23461864
Alignment:
Q  27 tgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtag 100  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23461791 tgccccgaatttgaaatgaagtctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtag 23461864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 14269467 - 14269553
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  14269467 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 14269553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 14269660 - 14269746
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  14269660 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 14269746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 16108394 - 16108473
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| ||||||    
T  16108394 gaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 16108473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 14948826 - 14948912
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  14948826 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 14948912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 15376417 - 15376503
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  15376417 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 15376503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 16232979 - 16232893
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  16232979 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 16232893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 16410517 - 16410431
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  16410517 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 16410431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 20384827 - 20384913
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  20384827 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 20384913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 25926833 - 25926907
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatg 105  Q
    ||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||    
T  25926833 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatg 25926907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 27217319 - 27217233
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  27217319 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 27217233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 32125949 - 32125863
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  32125949 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 32125863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 45846926 - 45846983
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgat 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45846926 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgat 45846983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 11303704 - 11303620
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||| ||||||||||||||||||||||||| |||||| ||||    
T  11303704 gaatttgaaatgaaaactggtattgattggtacataattggtcttagatgtaaacacgaaagttgtaggtatggatgttagcttt 11303620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 23664658 - 23664742
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||||  |||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  23664658 gaatttgaaatgaaaaatggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 23664742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 456780 - 456694
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| | ||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  456780 ccgaatttgaaatgaaaaccggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 15081545 - 15081631
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||| ||||||| ||| || |||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  15081545 ccgaatttgaaatgaaaactgatattgattggtacagaattggtcttaggtgtaaacacaaaagttgtaggtatgaatgttagcttt 15081631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 18431170 - 18431096
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatg 105  Q
    ||||||||||||||||| ||||||||||| ||| || || |||||||||||||||||||||||||||||||||||    
T  18431170 ccgaatttgaaatgaaaactggtattgattggtacagaactggtcttaggtgtaaacacgaaagttgtaggtatg 18431096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 13869801 - 13869721
Alignment:
Q  37 ttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||| ||||||||||| ||| || |||||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  13869801 ttgaaatgaaaactggtattgattggtacataattggtcttaggtataaacacgaaagttgtaggtatggatgttagcttt 13869721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 29797067 - 29796983
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| ||||||||||| | | || |||||||||||||||||| ||||||||||||||||||| |||||| ||||    
T  29797067 gaatttgaaatgaaaactggtattgattgatacagaattggtcttaggtgtaagcacgaaagttgtaggtatggatgttagcttt 29796983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 29800886 - 29800802
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| ||||||||||| | | || |||||||||||||||||| ||||||||||||||||||| |||||| ||||    
T  29800886 gaatttgaaatgaaaactggtattgattgatacagaattggtcttaggtgtaagcacgaaagttgtaggtatggatgttagcttt 29800802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 16214143 - 16214057
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| | | || ||||||||||| |||||||||| ||||||||||||||| |||||| ||||    
T  16214143 ccgaatttgaaatgaaaactggtattgattgatacagaattggtcttacgtgtaaacacaaaagttgtaggtatggatgttagcttt 16214057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 17985092 - 17985170
Alignment:
Q  35 atttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaa 113  Q
    |||| |||||||||||||||||||| ||| || ||||||||||||||||||||| |||||||||||||| | |||||||    
T  17985092 atttcaaatgaaatctggtattgatcggtacagaattggtcttaggtgtaaacatgaaagttgtaggtaaggatgttaa 17985170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 18640730 - 18640644
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||| ||||||| ||  || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  18640730 ccgaatttgaaatgaaaactgatattgattggcacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 18640644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 24702687 - 24702601
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||| | ||| || ||||||||||||||||||||||||| |||||||||||  |||||| ||||    
T  24702687 ccgaatttgaaatgaaaactggtattggttggtacagaattggtcttaggtgtaaacacgaaggttgtaggtataaatgttagcttt 24702601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 24705134 - 24705048
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||| | ||| || ||||||||||||||||||||||||| |||||||||||  |||||| ||||    
T  24705134 ccgaatttgaaatgaaaactggtattggttggtacagaattggtcttaggtgtaaacacgaaggttgtaggtataaatgttagcttt 24705048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 26355685 - 26355771
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||| ||| ||||||||||| ||| || ||||||||||| |||| ||||||||||||||||||||| |||||| ||||    
T  26355685 ccgaatttgaaataaaaactggtattgattggtacagaattggtcttatgtgttaacacgaaagttgtaggtatgaatgttagcttt 26355771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 26358137 - 26358223
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||| ||| ||||||||||| ||| || ||||||||||| |||| ||||||||||||||||||||| |||||| ||||    
T  26358137 ccgaatttgaaataaaaactggtattgattggtacagaattggtcttatgtgttaacacgaaagttgtaggtatgaatgttagcttt 26358223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 41523376 - 41523290
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||  ||||||||||||||  |||||| ||||    
T  41523376 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacataaaagttgtaggtataaatgttagcttt 41523290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 41525838 - 41525752
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||  ||||||||||||||  |||||| ||||    
T  41525838 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacataaaagttgtaggtataaatgttagcttt 41525752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 8940742 - 8940652
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaa----acacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||| ||||||| ||| |||||||||||||||||||||    |||||||||||||||||||| |||||| ||||    
T  8940742 ccgaatttgaaatgaaaactgctattgattggtacaaaattggtcttaggtgtaaacacacacgaaagttgtaggtatgaatgttagcttt 8940652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 10501097 - 10501178
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    ||||||||||||||||| ||||||||||| | | || | |||||||||||||||||||| ||||||||||||||| ||||||    
T  10501097 ccgaatttgaaatgaaaactggtattgattgatacagagttggtcttaggtgtaaacacaaaagttgtaggtatggatgtta 10501178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 21189302 - 21189386
Alignment:
Q  34 aatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaactttt 118  Q
    |||||||||||||| |||||||| || ||| || | ||||||||||||||||||| |||||||||||||||| |||||| |||||    
T  21189302 aatttgaaatgaaaactggtatttattggtacagagttggtcttaggtgtaaacaagaaagttgtaggtatgaatgttagctttt 21189386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 13918106 - 13918193
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtc-ttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||| ||||||||||||||||||  |||||||||| |||||| ||||    
T  13918106 ccgaatttgaaatgaaaactggtattgattggtacagaattggtctttaggtgtaaacacgaaaactgtaggtatgaatgttagcttt 13918193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 1856933 - 1857018
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||| ||| ||||||||||| ||| |  ||||||||||||||||||||||| |||||||||||||| |||||| ||||    
T  1856933 ccgaatttgaaataaaaactggtattgattggtaccgaattggtcttaggtgtaaacacg-aagttgtaggtatgaatgttagcttt 1857018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 8940934 - 8940849
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| | | || |||||||||||||||||||||  ||||||||||||||| |||||| ||||    
T  8940934 ccgaatttgaaatgaaaactggtattgattgatacataattggtcttaggtgtaaaca-aaaagttgtaggtatggatgttagcttt 8940849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 18628024 - 18627938
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||| |||||||| ||| ||||||| ||  || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  18628024 ccgaatttaaaatgaaaactgatattgattggcacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 18627938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 45847358 - 45847444
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||||||  |  ||||||| ||| ||||||||||||||||| ||||||| ||||||||||||||| |||||| ||||    
T  45847358 ccgaatttgaaatgaaaaataatattgattggtacaaaattggtcttaggtataaacacaaaagttgtaggtatggatgttagcttt 45847444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 14156782 - 14156864
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| |||||||||||||||||    |||| ||||||||||||||| |||||| ||||    
T  14156782 ccgaatttgaaatgaaaactggtattgattggtacaaaattggtcttaggt----acactaaagttgtaggtatgaatgttagcttt 14156864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 14156592 - 14156675
Alignment:
Q  34 aatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||  ||| ||||||||||| ||| || |||||||||||||||  ||||||||||||||||||||| |||||| ||||    
T  14156592 aatttgaaacaaaaactggtattgatcggtacagaattggtcttaggtgataacacgaaagttgtaggtatggatgttagcttt 14156675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 10500934 - 10501017
Alignment:
Q  34 aatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||  ||| ||||||||||| ||| || |||||||||||||||  |||| |||||||||||||||| |||||| ||||    
T  10500934 aatttgaaacaaaaactggtattgatcggtacagaattggtcttaggtgataacatgaaagttgtaggtatggatgttagcttt 10501017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 8946425 - 8946370
Alignment:
Q  174 agagaaaatctcaccactttgacaaatggctcgaacattt--ccccatataatttt 227  Q
    |||||| ||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  8946425 agagaagatctcaccactttgacaaatggctccaacatttccccccatataatttt 8946370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 11310214 - 11310141
Alignment:
Q  30 cccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtat 104  Q
    |||||||||||||||||| ||| |||||||| || || ||||||||||||||||   ||| ||||||||||||||    
T  11310214 cccgaatttgaaatgaaaactg-tattgataagtacataattggtcttaggtgttttcacaaaagttgtaggtat 11310141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 20110779 - 20110747
Alignment:
Q  68 aattggtcttaggtgtaaacacgaaagttgtag 100  Q
    |||||||||||||||||||||||||||||||||    
T  20110779 aattggtcttaggtgtaaacacgaaagttgtag 20110747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 15739554 - 15739599
Alignment:
Q  184 tcaccactttgacaaatggctcgaacattt--ccccatataatttt 227  Q
    |||||||||||||||||||||| |||||||  ||||||||||||||    
T  15739554 tcaccactttgacaaatggctccaacatttacccccatataatttt 15739599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 3e-50; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 2154113 - 2154229
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2154113 tttttctgatttttcttttcatctctgccccaaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtagg 2154212  T
Q  102 tatgcatgttaactttt 118  Q
    |||| |||||| |||||    
T  2154213 tatggatgttagctttt 2154229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 32028706 - 32028591
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32028706 tttttctgatttttcttttcatctctgccctgaatttgaaatgaaatctggtattgataggtcaaaaattggtcttaggtgtaaacacgaaagttgtagg 32028607  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  32028606 tatggatgttagcttt 32028591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 20917328 - 20917443
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  20917328 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatcaggtattgataggtccataattgatcttaggtgtaaacacgaaagttgtagg 20917427  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  20917428 tatgaatgttagcttt 20917443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 29330663 - 29330548
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||    
T  29330663 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtcaagaattggtcttaggtgtaaacacaaaagttgtagg 29330564  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  29330563 tatggatgttagcttt 29330548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 17516452 - 17516567
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  17516452 ttttcctgatttttcttttcatctctgccccgaatttgaaatgaaaaccggtattgattggtacaaaattggtcttaggtgtaaacacgaaagttgtagg 17516551  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  17516552 tatggatgttagcttt 17516567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 20901402 - 20901510
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||||||| ||||||||    
T  20901402 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaacgttgtagg 20901501  T
Q  102 tatgcatgt 110  Q
    |||| ||||    
T  20901502 tatggatgt 20901510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 295756 - 295871
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||  ||| |||||||||||||| || ||||||||||||    
T  295756 tttttctgatttttcttttcatctctgtcccgaatttgaaatgaaatctggtattgataagtccggaataggtcttaggtgtaaccatgaaagttgtagg 295855  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  295856 tatgaatgttagcttt 295871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 32028291 - 32028205
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  32028291 ccgaatttgaaatgaaatctggtattgataggtcaagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 32028205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 17516869 - 17516953
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  17516869 gaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 17516953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 10732644 - 10732730
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  10732644 ccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 10732730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 20909470 - 20909384
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  20909470 ccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 20909384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 20917550 - 20917636
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||| ||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  20917550 ccgaattcgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 20917636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 29330441 - 29330355
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||| ||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  29330441 ccgaatttgaaataaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 29330355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 29346438 - 29346352
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  29346438 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 29346352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 29348911 - 29348825
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  29348911 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 29348825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 29351384 - 29351298
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  29351384 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 29351298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 32027904 - 32027823
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    ||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||| |||||||||||||||| ||||||    
T  32027904 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacaagaaagttgtaggtatgaatgtta 32027823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 37804609 - 37804692
Alignment:
Q  34 aatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||| |||| |||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  37804609 aatttgaaatgaaaactggcattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 37804692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 2154335 - 2154409
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatg 105  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||| |||||||||||||||    
T  2154335 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacactaaagttgtaggtatg 2154409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 39245594 - 39245508
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || ||||||||||| |||||||||||||||||||||||||  |||||| ||||    
T  39245594 ccgaatttgaaatgaaaactggtattgattggtacataattggtcttatgtgtaaacacgaaagttgtaggtataaatgttagcttt 39245508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 264472 - 264545
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtat 104  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||    
T  264472 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacaaaagttgtaggtat 264545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 20901624 - 20901705
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    |||| |||||||||||| ||||||||||| ||| || ||||||||||||||||||||| |||||||||||||||| ||||||    
T  20901624 ccgattttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacatgaaagttgtaggtatggatgtta 20901705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 42245069 - 42245142
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtat 104  Q
    ||||||||||||||||| ||||||||||| | | || |||||||||||||||||||||||||||||||||||||    
T  42245069 ccgaatttgaaatgaaaactggtattgattgatacagaattggtcttaggtgtaaacacgaaagttgtaggtat 42245142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 39363837 - 39363757
Alignment:
Q  37 ttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||| ||||||||||| ||| || |||||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  39363837 ttgaaatgaaaactggtattgattggtacataattggtcttaggtataaacacgaaagttgtaggtatggatgttagcttt 39363757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 295978 - 296064
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||| ||||||| ||| || ||||||||||||||||| |||| ||||||||||||||| |||||| ||||    
T  295978 ccgaatttgaaatgaaaactgatattgattggtacagaattggtcttaggtgtatacacaaaagttgtaggtatggatgttagcttt 296064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 32028484 - 32028398
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || ||||||| ||||||| |||||||||||||||||||||  |||||| ||||    
T  32028484 ccgaatttgaaatgaaaactggtattgattggtacagaattggttttaggtgaaaacacgaaagttgtaggtatatatgttagcttt 32028398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 23064972 - 23064893
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgt 110  Q
    ||||||||||||| ||| ||||||||||| ||| || |||||||||||| | ||||||||||||||||||||||| ||||    
T  23064972 ccgaatttgaaattaaaactggtattgattggtacagaattggtcttagatataaacacgaaagttgtaggtatggatgt 23064893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 112
Target Start/End: Complemental strand, 38619889 - 38619814
Alignment:
Q  37 ttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    ||||||| ||| ||||||||||| ||| || |||||||||||||| ||||||||||||||||||||||| ||||||    
T  38619889 ttgaaataaaaactggtattgattggtacataattggtcttaggtataaacacgaaagttgtaggtatggatgtta 38619814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 17516674 - 17516760
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||| ||| ||||||||  |||||||||| ||  || |||||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  17516674 ccgatttttaaatgaaaaatggtattgattggcacagaattggtcctaggtgtaaacacgaaagttgtaggtatggatgttagcttt 17516760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 32028097 - 32028011
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||||||  || ||||||| ||| || |||||||||||||||||||||| ||| |||||  |||| |||||| ||||    
T  32028097 ccgaatttgaaatgaaaattgttattgattggtacagaattggtcttaggtgtaaacacaaaaattgtatttatggatgttagcttt 32028011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 1e-49; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 18214685 - 18214800
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18214685 tttttctgatttttcttttcatctctgccccaaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtagg 18214784  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  18214785 tatggatgttagcttt 18214800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 52872554 - 52872669
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  52872554 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaaactggtattgattggtacaaaattggtcttaggtgtaaacacgaaagttgtagg 52872653  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  52872654 tatggatgttagcttt 52872669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 11929 - 12044
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  11929 tttttctgatttttctttttatctctgccccgaatttgaaatgaaatctggtattgataggtacagaattggtcttaggtgtaaacacgaaagttgtagg 12028  T
Q  102 tatgcatgttaacttt 117  Q
    |||  |||||| ||||    
T  12029 tatcaatgttagcttt 12044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 3515688 - 3515573
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  3515688 tttttctgatttttcttttcatctctaccctgaatttgaaatgaaatctggtattgataggtccagaattggtcttaggcgtaaacacgaaagttgtagg 3515589  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  3515588 tatggatgttagcttt 3515573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 52313435 - 52313320
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||| ||||    
T  52313435 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtcaagaattgatcttaggtgtaaacacgaaagttatagg 52313336  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  52313335 tatggatgttagcttt 52313320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 19617554 - 19617663
Alignment:
Q  8 tgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgca 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||| |||||||||||||||||||| |    
T  19617554 tgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgattggtacataattggtcttaggtgtagacacgaaagttgtaggtatgga 19617653  T
Q  108 tgttaacttt 117  Q
    ||||| ||||    
T  19617654 tgttagcttt 19617663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 12778358 - 12778460
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||    
T  12778358 tttttctgatttt-cttttcatctctgccccgaatttgaaatgaaatctggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtagg 12778456  T
Q  102 tatg 105  Q
    ||||    
T  12778457 tatg 12778460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 363054 - 362939
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||  | |||||||||||||||||||| |||||||||||||    
T  363054 tttttatgatttttcttttcatctctgccccgaatttgaaatgaaatgtggtattgatttgtatagaattggtcttaggtgtaaacccgaaagttgtagg 362955  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  362954 tatggatgttagcttt 362939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 14970188 - 14970303
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  || || |||||||||||||||  ||||| |||||||||||    
T  14970188 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaaactggtattgatttgtacacaattggtcttaggtgataacacaaaagttgtagg 14970287  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  14970288 tatggatgttagcttt 14970303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 19858259 - 19858144
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||  |||||||||| ||| || ||||||||||||||| |||||| |||||||||||    
T  19858259 tttttctaatttttcttttcatctctaccccgaatttgaaatgaaaaatggtattgattggtacagaattggtcttaggtgcaaacacaaaagttgtagg 19858160  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  19858159 tatggatgttagcttt 19858144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 15489630 - 15489717
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacac 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | | || ||||||||||||||||||||||    
T  15489630 tttttctgatttttcttttcatctctgccccgaatttgaaatgaagtctggtattgattgatacagaattggtcttaggtgtaaacac 15489717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 52313213 - 52313132
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| ||||||    
T  52313213 ccgaatttgaaatgaaatctggtattgataggtccagaattgatcttaggtgtaaacacaaaagttgtaggtatggatgtta 52313132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 3515466 - 3515380
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  3515466 ccgaatttgaaatgaaaactggtattgatcggtacaaaattggtcttaggtgtaaacacaaaagttgtaggtatggatgttagcttt 3515380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 14745857 - 14745931
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtct 76  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  14745857 tttttctaatttttcttttcatctctgccccgaatttgaaatgaaatttggtattgataggtccagaattggtct 14745931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 52313020 - 52312934
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  52313020 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 52312934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 15534638 - 15534554
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  15534638 gaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 15534554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 362832 - 362746
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  362832 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacactaaagttgtaggtatggatgttagcttt 362746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 7640890 - 7640976
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  7640890 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 7640976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 14746022 - 14746108
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||| |||||||||||||||| |||||| ||||    
T  14746022 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacaagaaagttgtaggtatggatgttatcttt 14746108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 14970410 - 14970496
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| |||  | |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  14970410 ccgaatttgaaatgaaaactggtattgattggtatagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 14970496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 15118056 - 15118142
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  15118056 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 15118142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 19858029 - 19857951
Alignment:
Q  39 gaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  19858029 gaaatgaaaactggtattgattggtacaaaattggtcttaggtgtaaacacgaaagttgtaggtatgtatgttagcttt 19857951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 29267812 - 29267726
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  29267812 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 29267726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 52872776 - 52872850
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatg 105  Q
    ||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||    
T  52872776 ccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatg 52872850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 362637 - 362553
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| ||||||||||| | | ||||||| ||||||||||||||||||||||||||||||||| |||||| ||||    
T  362637 gaatttgaaatgaaaactggtattgattgatacaaaattagtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 362553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 36038327 - 36038243
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| ||||||||||| ||| || |||||| ||||||||||||||||||||||||||||||| |||||| ||||    
T  36038327 gaatttgaaatgaaaactggtattgattggtacagaattggccttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 36038243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 49547479 - 49547563
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  49547479 gaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaatttgtaggtatggatgttagcttt 49547563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 1837223 - 1837309
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||| |||||||||||||||  |||||| ||||    
T  1837223 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacatgaaagttgtaggtataaatgttagcttt 1837309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 15495880 - 15495963
Alignment:
Q  34 aatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||| ||||||| ||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  15495880 aatttggaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgttagcttt 15495963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 14746215 - 14746301
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||| |||||||  |||||||||||||||||| |||||| ||||    
T  14746215 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttcggtgtaaggacgaaagttgtaggtatgaatgttagcttt 14746301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 44772787 - 44772873
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||| |||||||| |||||||| || |||  | |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  44772787 ccgaattttaaatgaaaactggtatttattggtagagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 44772873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 50222043 - 50222129
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||| |||| |||||||||  |||||| ||||    
T  50222043 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacaaaagatgtaggtataaatgttagcttt 50222129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 19243159 - 19243073
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||| |||| ||||||||||| ||| || |||| ||||||||| |||||| |||||||||||||||| |||||| ||||    
T  19243159 ccgaatttgaaacgaaaactggtattgattggtacagaattagtcttaggtataaacaagaaagttgtaggtatgtatgttagcttt 19243073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 30147374 - 30147300
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatg 105  Q
    |||||||||||||||||  ||| |||||| ||| ||||||||||||||||||||||||| ||||||||| |||||    
T  30147374 ccgaatttgaaatgaaaaatggaattgattggtacaaaattggtcttaggtgtaaacacaaaagttgtaagtatg 30147300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 44615747 - 44615661
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| |||||||||||  || || ||||||||||| |||||||||||||| ||||||||||  |||||| ||||    
T  44615747 ccgaatttgaaatgaaaactggtattgattagtacataattggtcttaagtgtaaacacgaaatttgtaggtataaatgttagcttt 44615661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 15354999 - 15355052
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtat 55  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  15354999 tttttctgatttttctttccatctctgccccgaatttgaaatgaaaactggtat 15355052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 14049034 - 14048950
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| || |||||||| ||| || ||||||| ||||||||||||| ||||||||| |||||| |||||| ||||    
T  14049034 gaatttgaaatgaaaactagtattgattggtacataattggttttaggtgtaaacatgaaagttgtgggtatgaatgttagcttt 14048950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 19617772 - 19617856
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| ||||||||||| ||| || | |||||||||||||| ||||| |||||| |||||||| |||||| ||||    
T  19617772 gaatttgaaatgaaaactggtattgattggtacagagttggtcttaggtgttaacacaaaagttataggtatggatgttagcttt 19617856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 14185595 - 14185525
Alignment:
Q  30 cccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtag 100  Q
    |||||||||||||| ||| ||||||||||| ||| || |||||||||||||||| |||| |||||||||||    
T  14185595 cccgaatttgaaataaaaactggtattgattggtacagaattggtcttaggtgttaacatgaaagttgtag 14185525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 18214907 - 18214965
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacac 89  Q
    ||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||||    
T  18214907 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacac 18214965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 22725431 - 22725494
Alignment:
Q  34 aatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttg 97  Q
    |||||||||||||| ||| ||||||||||| || |||||||||| |||||||||| ||||||||    
T  22725431 aatttgaaatgaaaactgatattgataggtacagaattggtctttggtgtaaacatgaaagttg 22725494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 15495721 - 15495770
Alignment:
Q  68 aattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  15495721 aattggtcttaggtgtaaacacaaaagttgtaggtatggatgttagcttt 15495770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 1e-49; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 24514164 - 24514049
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  24514164 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgatagctccagaattggtcttaggtgtaaacacgaaagttgtagg 24514065  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  24514064 tatggatgttagcttt 24514049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 20629673 - 20629788
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||    
T  20629673 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacacaaaagttatagg 20629772  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  20629773 tatggatgttagcttt 20629788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 38961319 - 38961434
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  38961319 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatatggtattgataggtcaagaattggtcttaggtgtaaacacgaaagttgtagg 38961418  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  38961419 tatggatgttagcttt 38961434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 16282239 - 16282355
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  16282239 tttttctgatttttcttttcatctctgccccgaatttaaaatgaaatctggtattgataggtcaagaattggtcttaggtgtaaacacgaaagttgtagg 16282338  T
Q  102 tatgcatgttaactttt 118  Q
    |||  |||||| |||||    
T  16282339 tatagatgttatctttt 16282355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 55318785 - 55318888
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  55318785 tttttctgatttttcttttcatctctgccccaaatttgaaatgaaatctggtattgataggtccagaactggtcttaggtgtaaacacgaaagttgtagg 55318884  T
Q  102 tatg 105  Q
    ||||    
T  55318885 tatg 55318888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 8899513 - 8899418
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttg 97  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8899513 tttttctaatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttg 8899418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 17444253 - 17444360
Alignment:
Q  10 atttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||| |||    
T  17444253 atttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacaggaaagttgtaagtatggatg 17444352  T
Q  110 ttaacttt 117  Q
    ||| ||||    
T  17444353 ttatcttt 17444360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 13937455 - 13937569
Alignment:
Q  3 ttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggt 102  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||    
T  13937455 ttttctgatttttcttttcatctttgccctgaatttgaaatgaaatctggtattgataggacaagaattggtcttaggtgtaaacacgaaagttgtaggt 13937554  T
Q  103 atgcatgttaacttt 117  Q
    ||| |||||| ||||    
T  13937555 atggatgttagcttt 13937569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 12119328 - 12119443
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||  || || ||||||||||||||||||||||||||||||||||    
T  12119328 tttttctgatttttcttttcatctctgccccgaatttgaaataaaaactggtattgatcagtacagaattggtcttaggtgtaaacacgaaagttgtagg 12119427  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  12119428 tatggatgttagcttt 12119443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 27165933 - 27165818
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| || |||||||| ||| || ||||||||||||||||||||||||||||||||||    
T  27165933 tttttctaatttttcttttcatctctgccccgaatttgaaataaaaactagtattgatcggtacagaattggtcttaggtgtaaacacgaaagttgtagg 27165834  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  27165833 tatgtatgttagcttt 27165818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 46822942 - 46822827
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| | | || ||||||||||||||||||||||| ||||||||||    
T  46822942 tttttctgatttttcttttcatctgtgccccgaatttgaaatgaaaactggtattgattgctacataattggtcttaggtgtaaacacggaagttgtagg 46822843  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  46822842 tatggatgttagcttt 46822827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 10379812 - 10379700
Alignment:
Q  5 ttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtat 104  Q
    |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| | | || |||||||||||||||||||||||||||||||||||||    
T  10379812 ttctgatttttcttttcatctctgccccgaatatgaaataaaaactggtattgattgatacagaattggtcttaggtgtaaacacgaaagttgtaggtat 10379713  T
Q  105 gcatgttaacttt 117  Q
    | |||||| ||||    
T  10379712 ggatgttagcttt 10379700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 53300985 - 53301100
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| |  |||||||| ||| || ||||||||||||||||||||||||||||||||||    
T  53300985 tttttctgatttttcttttcatctttgccccgaatttgaaataaaaacaagtattgatcggtacataattggtcttaggtgtaaacacgaaagttgtagg 53301084  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  53301085 tatgtatgttagcttt 53301100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 41124612 - 41124505
Alignment:
Q  10 atttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatg 109  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||| |||  | |||||||||||||||||||||| ||||||||||||||| |||    
T  41124612 atttttctttttatctctgccccgaatttgaaatgaaaactggtattgattggtaaagaattggtcttaggtgtaaacacaaaagttgtaggtatgaatg 41124513  T
Q  110 ttaacttt 117  Q
    ||| ||||    
T  41124512 ttagcttt 41124505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 10557580 - 10557474
Alignment:
Q  11 tttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgt 110  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||| ||| || |||||||||||| ||||||||| ||||||||||||||| ||||    
T  10557580 tttttcttttcatctctgccccgaatttgaaacgaaatatggtattgattggtacagaattggtcttagttgtaaacacaaaagttgtaggtatggatgt 10557481  T
Q  111 taacttt 117  Q
    || ||||    
T  10557480 tagcttt 10557474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 8500201 - 8500086
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| | |  | |||||||||||||||||||||| |||||||||||    
T  8500201 tttttctgatttttcttttcatctcttccccgaatttgaaataaaaactggtattgatcgatatagaattggtcttaggtgtaaacacaaaagttgtagg 8500102  T
Q  102 tatgcatgttaacttt 117  Q
    |||  |||||| ||||    
T  8500101 tatagatgttagcttt 8500086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 10247427 - 10247513
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  10247427 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 10247513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 10557367 - 10557281
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| |||  | |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  10557367 ccgaatttgaaatgaaaactggtattgattggtaaataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 10557281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 12568018 - 12567932
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| || |||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  12568018 ccgaatttgaaatgaaaactagtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 12567932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 13544482 - 13544396
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| || |||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  13544482 ccgaatttgaaatgaaaactagtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 13544396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 15465613 - 15465527
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||||||  |||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  15465613 ccgaatttgaaatgaaaattggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 15465527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 15977991 - 15977905
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  15977991 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 15977905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 16453984 - 16454070
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  16453984 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 16454070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 17444467 - 17444553
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || ||||||||||| |||||||||||||||||||||||||| |||||| ||||    
T  17444467 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaagtgtaaacacgaaagttgtaggtatgaatgttagcttt 17444553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 17463636 - 17463550
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  17463636 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 17463550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 34159784 - 34159698
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  34159784 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 34159698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 112
Target Start/End: Complemental strand, 36528422 - 36528340
Alignment:
Q  30 cccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    |||||||||||||||||| |||||||||||| || || |||||||||||| ||||||||||||||||||||||||| ||||||    
T  36528422 cccgaatttgaaatgaaaactggtattgataagtacagaattggtcttagatgtaaacacgaaagttgtaggtatggatgtta 36528340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 41124398 - 41124312
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||| |||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  41124398 ccgaatgtgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 41124312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 45606610 - 45606696
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  45606610 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 45606696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 16282461 - 16282542
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    ||||||||||||||||| || |||||||| ||| || |||||||||||||||||||||||||||||||||||||| ||||||    
T  16282461 ccgaatttgaaatgaaaactagtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 16282542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 38961541 - 38961622
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    ||||||||||||||||| ||||||||||| | | || |||||||||||||||||||||||||||||||||||||| ||||||    
T  38961541 ccgaatttgaaatgaaaactggtattgattgatacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 38961622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 29544547 - 29544631
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| ||| ||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  29544547 gaatttgaaatgaaaactgttattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 29544631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 54521279 - 54521195
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||||||||||||| |||||| |||||| ||||    
T  54521279 gaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtgggtatggatgttagcttt 54521195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 55319010 - 55319093
Alignment:
Q  34 aatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||  |||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  55319010 aatttgaaatgaaaattggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 55319093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 5223842 - 5223756
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||| |||||||||||||||||||||||| |||||||| |||||| ||||    
T  5223842 ccgaatttgaaatgaaaactggtattgattggtacagaattcgtcttaggtgtaaacacgaaagttataggtatggatgttagcttt 5223756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 8499979 - 8499905
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatg 105  Q
    ||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||||||||||||||| ||||    
T  8499979 ccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtagatatg 8499905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 13153959 - 13154045
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||| |||||||||||||||||||| |||||||| |||||| ||||    
T  13153959 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcataggtgtaaacacgaaagttttaggtatgaatgttagcttt 13154045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 20629895 - 20629981
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| || |||||||| ||| || |||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  20629895 ccgaatttgaaatgaaaacttgtattgattggtacagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgttagcttt 20629981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 28848325 - 28848411
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| |  |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  28848325 ccgaatttgaaatgaaaactggtattgattggtactgaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 28848411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 53301207 - 53301281
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatg 105  Q
    ||||||||||||| ||| ||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||    
T  53301207 ccgaatttgaaataaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatg 53301281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 7781050 - 7781123
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtat 104  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||    
T  7781050 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacaaaagttgtaggtat 7781123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 15412884 - 15412804
Alignment:
Q  37 ttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||| ||||||||||| ||| || |||||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  15412884 ttgaaatgaaaactggtattgattggtacataattggtcttaggtataaacacgaaagttgtaggtatggatgttagcttt 15412804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 6468838 - 6468924
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||| ||||||||||||||||| ||||||  |||||| ||||    
T  6468838 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttagctgtaaacacgaaagttggaggtataaatgttagcttt 6468924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 13151494 - 13151580
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||  || |||||||| |||||||||||||||||||| |||||||| |||||| ||||    
T  13151494 ccgaatttgaaatgaaaactggtattgattggaacagaattggtcataggtgtaaacacgaaagttttaggtatgaatgttagcttt 13151580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 26054968 - 26055054
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||| ||||  |||||||||| ||| || ||||||||||||||||||||| |||||||||||||||| |||||| ||||    
T  26054968 ccgaatttgaaaggaaaattggtattgattggtacataattggtcttaggtgtaaacatgaaagttgtaggtatggatgttagcttt 26055054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 27165711 - 27165637
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatg 105  Q
    |||| |||||||||||| ||||||||||| ||| || ||||||||||||| ||||||||||||||||||||||||    
T  27165711 ccgattttgaaatgaaaactggtattgattggtacagaattggtcttaggggtaaacacgaaagttgtaggtatg 27165637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 46822720 - 46822634
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||| ||||||||||||  |||||||||| |||  | |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  46822720 ccgattttgaaatgaaaagtggtattgattggtaaacaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 46822634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 55476949 - 55476863
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||| ||| ||||||||||  ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  55476949 ccgaatttgaaattaaaactggtattgactggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 55476863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 17393382 - 17393281
Alignment:
Q  17 ttttcatctctgcccc-gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaact 115  Q
    |||||||||||||||| |||||| ||||||| |||  ||||||| ||| || |||||||||||| ||||||||| ||||||||||||||| |||||| ||    
T  17393382 ttttcatctctgcccccgaatttcaaatgaactcttctattgatcggtacagaattggtcttagatgtaaacacaaaagttgtaggtatggatgttacct 17393283  T
Q  116 tt 117  Q
    ||    
T  17393282 tt 17393281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 25229715 - 25229634
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    |||||||||||||||||  |||||||||| | | || ||||||||||||||||||||||||||||||| |||||| ||||||    
T  25229715 ccgaatttgaaatgaaaattggtattgattgatacagaattggtcttaggtgtaaacacgaaagttgttggtatgaatgtta 25229634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 25237302 - 25237221
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    |||||||||||||||||  |||||||||| | | || ||||||||||||||||||||||||||||||| |||||| ||||||    
T  25237302 ccgaatttgaaatgaaaattggtattgattgatacagaattggtcttaggtgtaaacacgaaagttgttggtatgaatgtta 25237221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 15007961 - 15007872
Alignment:
Q  31 ccgaatttgaaatgaaat---ctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||||||    ||||||||||| ||| |||||||||| ||||||||||||||||||||| |||||||| |||||| ||||    
T  15007961 ccgaatttgaaatgaaaagtactggtattgattggtacaaaattggttttaggtgtaaacacgaaagttataggtatggatgttagcttt 15007872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 13436758 - 13436672
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||| |||||||||||| || |||||||| ||| || |||||||||||||| |||| |||||||||||||||||| |||||| ||||    
T  13436758 ccgagtttgaaatgaaaacttgtattgattggtacataattggtcttaggtataaatacgaaagttgtaggtatggatgttagcttt 13436672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 16358371 - 16358457
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||| ||||||| ||| |||  |||||| ||||    
T  16358371 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacatgaaagttttagatatagatgttagcttt 16358457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 45220361 - 45220418
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgat 59  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  45220361 tttttcttatttttcttttcatctctgcccagaatttgaaatgaaatatggtattgat 45220418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 14567432 - 14567481
Alignment:
Q  68 aattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  14567432 aattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 14567481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 51857329 - 51857274
Alignment:
Q  174 agagaaaatctcaccactttgacaaatggctcgaacattt--ccccatataatttt 227  Q
    |||||||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  51857329 agagaaaatctcaccactttgacaaatggctccaacattttcccccatataatttt 51857274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 14567587 - 14567653
Alignment:
Q  30 cccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagtt 96  Q
    |||||||||||||||||| ||||||||| ||||| || |||||| ||| |||||||||| |||||||    
T  14567587 cccgaatttgaaatgaaaactggtattggtaggtacagaattggcctttggtgtaaacatgaaagtt 14567653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 3264459 - 3264538
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    |||||||||||||||  ||||||||||| ||  | ||||| ||||||||||   ||||||||||||||||||| ||||||    
T  3264459 gaatttgaaatgaaaattggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 3264538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 10555812 - 10555766
Alignment:
Q  52 gtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgt 98  Q
    |||||||| ||| || |||||||||||||||||||||||||||||||    
T  10555812 gtattgattggtacataattggtcttaggtgtaaacacgaaagttgt 10555766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 12305579 - 12305525
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaac 87  Q
    ||||||||||||||| ||| ||||||| ||| || ||||||||||||||||||||    
T  12305579 gaatttgaaatgaaaactgatattgattggtacagaattggtcttaggtgtaaac 12305525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 36528569 - 36528528
Alignment:
Q  76 ttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||||||||||||||||||| |||||| ||||    
T  36528569 ttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 36528528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 1e-49; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 23706507 - 23706622
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23706507 tttttctgatttttcttttcatctctggcccgaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtagg 23706606  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  23706607 tatggatgttagcttt 23706622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 21154296 - 21154411
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  21154296 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctagtattgataggtctagaattggtcttaggtgtaaacacgaaagttgtagg 21154395  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  21154396 tatggatgttagcttt 21154411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 24368507 - 24368392
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||    
T  24368507 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtcaatagttggtcttaggtgtaaacacgaaagttgtagg 24368408  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  24368407 tatggatgttagcttt 24368392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 24529028 - 24529143
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  24529028 tttttctgatttttcttttcatctttgccccgaatttgaaatgaaatctggtattgataggtccttaattggtcttaggtgtaaacacgaaagttgtagg 24529127  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  24529128 tatggatgttagcttt 24529143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 41523361 - 41523476
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  41523361 tttttctgattttttttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccataattggtcttacgtgtaaacacgaaagttgtagg 41523460  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  41523461 tatggatgttagcttt 41523476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 6726728 - 6726613
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| | ||||||||||||||||||||||||||||||||||    
T  6726728 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctcatattgataggtcaagaattggtcttaggtgtaaacacgaaagttgtagg 6726629  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  6726628 tatggatgttagcttt 6726613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 24682125 - 24682015
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  24682125 tttttctgatttttcttttcatctctcccccgaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacacaaaagttgtagg 24682026  T
Q  102 tatgcatgtta 112  Q
    | || ||||||    
T  24682025 tgtggatgtta 24682015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 24918820 - 24918706
Alignment:
Q  3 ttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggt 102  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  24918820 ttttcggatttttcttttcatctctgccctgaatttgaaatgaaatctggtattgataggtcaagaattggtcttaggtgtaaacacgaaagttgtaggt 24918721  T
Q  103 atgcatgttaacttt 117  Q
    ||| |||||| ||||    
T  24918720 atggatgttatcttt 24918706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 22106146 - 22106031
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||| |||||||||||    
T  22106146 tttttctgatttttattttcatctctgccccgaatttgaaatgaaaactggtattgattggtacaaaattggtcttaggtgtaaacacaaaagttgtagg 22106047  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  22106046 tatggatgttagcttt 22106031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 24671706 - 24671591
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||    
T  24671706 tttttctgatttttcttttcatctctgccccgaatttggaatgaaatctggtattgatatgtccagaattggtcttaggtgtaaacacaaaagttgtagg 24671607  T
Q  102 tatgcatgttaacttt 117  Q
    | || |||||| ||||    
T  24671606 tgtggatgttagcttt 24671591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 23932141 - 23932026
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||  | ||||||||||||||||||||||||||||||||||    
T  23932141 tttttctgatttttcttttcatctctgccctgaatttgaaatgaaagctggtattgattggtatagaattggtcttaggtgtaaacacgaaagttgtagg 23932042  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  23932041 tatggatgttagcttt 23932026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 32214411 - 32214526
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||| ||||||||||||||||||  |||||||||||||||||    
T  32214411 tttttctgatttttcttttcatctctgccccgaatttaaaatgaaaactggtattgattggtacaaaattggtcttaggtgataacacgaaagttgtagg 32214510  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  32214511 tatggatgttagcttt 32214526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 45027395 - 45027496
Alignment:
Q  11 tttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgt 110  Q
    |||||||||||||||||||||| ||||||||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  45027395 tttttcttttcatctctgccccaaatttgaaatggaatctggtgttgataggtccagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgt 45027494  T
Q  111 ta 112  Q
    ||    
T  45027495 ta 45027496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 22105924 - 22105838
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  22105924 ccgaatttgaaatgaaaactggtattgattggtgcagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 22105838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 23136038 - 23135952
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  23136038 ccgaatttgaaatgaaaactggtattgattggtacaaaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 23135952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 24368285 - 24368199
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  24368285 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 24368199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 45027608 - 45027694
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  45027608 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 45027694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 20261676 - 20261592
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  20261676 gaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 20261592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 18809401 - 18809315
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  18809401 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 18809315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 23711717 - 23711803
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  23711717 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 23711803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 24897899 - 24897985
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  24897899 ccgaatttgaaatgaaaactggtattgattggtacataattggtcataggtgtaaacacgaaagttgtaggtatgaatgttagcttt 24897985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 24900382 - 24900468
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  24900382 ccgaatttgaaatgaaaactggtattgattggtacataattggtcataggtgtaaacacgaaagttgtaggtatgaatgttagcttt 24900468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 24902859 - 24902945
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  24902859 ccgaatttgaaatgaaaactggtattgattggtacataattggtcataggtgtaaacacgaaagttgtaggtatgaatgttagcttt 24902945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 24905336 - 24905422
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  24905336 ccgaatttgaaatgaaaactggtattgattggtacataattggtcataggtgtaaacacgaaagttgtaggtatgaatgttagcttt 24905422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 26508315 - 26508229
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  26508315 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 26508229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 28577557 - 28577471
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||| ||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  28577557 ccgaatttgaaatgaaaactgatattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 28577471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 32214634 - 32214720
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| |||||||| |||||||||||||||| ||||||||||||||| |||||| ||||    
T  32214634 ccgaatttgaaatgaaaactggtattgattggtacaaaattgttcttaggtgtaaacacaaaagttgtaggtatggatgttagcttt 32214720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 39682772 - 39682686
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  39682772 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 39682686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 41523776 - 41523862
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||| ||||||||||||||||||||||||||||||||| |||||| ||||    
T  41523776 ccgaatttgaaatgaaaactggtattgattggtacagaattagtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 41523862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 571856 - 571770
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||| ||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  571856 ccgaatttgaaataaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 571770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 6726506 - 6726420
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| | | || || ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  6726506 ccgaatttgaaatgaaaactggtattgattgatacataagtggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 6726420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 21154711 - 21154797
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||| |||||||| |||||||||||||||||||||||| |||||| ||||    
T  21154711 ccgaatttgaaatgaaaactggtattgattggtacagaatttgtcttaggggtaaacacgaaagttgtaggtatgaatgttagcttt 21154797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 23706920 - 23707006
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||| ||||||| ||| || |||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  23706920 ccgaatttgaaatgaaaactgatattgattggtacagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgttagcttt 23707006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 23931919 - 23931833
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||  |||||| ||||    
T  23931919 ccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacactaaagttgtaggtattgatgttagcttt 23931833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 24907811 - 24907897
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||| |||||||||||| |||||||||||||||| |||||| ||||    
T  24907811 ccgaatttgaaatgaaaactggtattgattggtacataattggtcataggtgtaaacatgaaagttgtaggtatgaatgttagcttt 24907897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 26505837 - 26505751
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || ||||| |||||||||||||||||||||||||||||||  |||||| ||||    
T  26505837 ccgaatttgaaatgaaaactggtattgattggtacagaattgatcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 26505751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 41523584 - 41523669
Alignment:
Q  32 cgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||| ||| ||||||||||| ||| || ||||||||||||||||||||||||| |||||||||||| |||||| ||||    
T  41523584 cgaatttgaaataaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaggttgtaggtatggatgttatcttt 41523669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 10684468 - 10684552
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| ||||||||||| | | || |||||||||||||||||| ||||||||||||||||||| |||||| ||||    
T  10684468 gaatttgaaatgaaaactggtattgattgatacagaattggtcttaggtgtaagcacgaaagttgtaggtatggatgttagcttt 10684552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 23131315 - 23131235
Alignment:
Q  37 ttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||| ||||||||||| ||| || |||||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  23131315 ttgaaatgaaaactggtattgattggtacataattggtcttaggtataaacacgaaagttgtaggtatggatgttagcttt 23131235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 23133782 - 23133702
Alignment:
Q  37 ttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||| ||||||||||| ||| || |||||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  23133782 ttgaaatgaaaactggtattgattggtacataattggtcttaggtataaacacgaaagttgtaggtatggatgttagcttt 23133702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 24681901 - 24681817
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| ||||||||| | ||| || |||||||||||| ||||||||||||||||||||||||| |||||| ||||    
T  24681901 gaatttgaaatgaaaactggtattggttggtacagaattggtcttagctgtaaacacgaaagttgtaggtatggatgttagcttt 24681817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 34402231 - 34402311
Alignment:
Q  37 ttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||| ||||||||||| ||| || |||||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  34402231 ttgaaatgaaaactggtattgattggtacataattggtcttaggtataaacacgaaagttgtaggtatggatgttagcttt 34402311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 38967937 - 38967857
Alignment:
Q  32 cgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    |||||||||||||||| ||||||||||| ||| || ||||||||||||||||||| ||||||||||||| |||| ||||||    
T  38967937 cgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaatacgaaagttgtagatatggatgtta 38967857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 24529253 - 24529336
Alignment:
Q  34 aatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||| |||||||| || |||||||| ||| ||||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  24529253 aatttaaaatgaaaacttgtattgattggtacaaaattggtcttaggtgtaaacacaaaagttgtaggtatggatgttaccttt 24529336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 21154518 - 21154604
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| | |  | |||||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  21154518 ccgaatttgaaatgaaaactggtattgattgttatagaattggtcctaggtgtaaacacgaaagttgtaggtatggatgttagcttt 21154604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 23709236 - 23709322
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||| ||  ||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  23709236 ccgaatttgaaataaatactggtattgattggtacataattggtcttaggtgtaaacacaaaagttgtaggtatgaatgttagcttt 23709322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 24671484 - 24671398
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||| || |||||||| || ||| || ||||||||||||||||||| |||||||||||||||||| |||||| ||||    
T  24671484 ccgaatttgaaatgcaaactggtatttattggtacagaattggtcttaggtgtaaaaacgaaagttgtaggtatggatgttagcttt 24671398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 32039202 - 32039275
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtat 104  Q
    ||||||||||||||||| ||||||||||| |||  |  ||||||||||||||||||||||||||||||||||||    
T  32039202 ccgaatttgaaatgaaaactggtattgattggtaaaggattggtcttaggtgtaaacacgaaagttgtaggtat 32039275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 31345638 - 31345570
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgta 99  Q
    ||||||||||||||||| ||||||||||| ||| || ||||| ||||||||||||||||||||||||||    
T  31345638 ccgaatttgaaatgaaaactggtattgattggtacagaattgatcttaggtgtaaacacgaaagttgta 31345570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 23706728 - 23706814
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| | | ||||||| ||| || ||||||||||||||||||||||||||||| ||| |||| |||||| ||||    
T  23706728 ccgaatttgaaatgaaaacggctattgattggtacagaattggtcttaggtgtaaacacgaaagttatagttatggatgttaccttt 23706814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 24642452 - 24642538
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||| |||| ||||||||||| ||| || ||||| |||||||||||||| | ||||||||||||||| |||||| ||||    
T  24642452 ccgaatttgaaaagaaaactggtattgattggtacagaattgctcttaggtgtaaacccaaaagttgtaggtatggatgttagcttt 24642538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 24918599 - 24918513
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||| ||||||| |||  | ||||||||||| ||||||||| |||||||||||||||| |||||| ||||    
T  24918599 ccgaatttgaaatgaaaactgatattgattggtagagaattggtcttaagtgtaaacatgaaagttgtaggtatggatgttagcttt 24918513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 23709043 - 23709124
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    |||| |||||||||||| ||||||||||| ||  || |||| ||| |||||||||||||| |||||||||||||| ||||||    
T  23709043 ccgattttgaaatgaaaactggtattgattggcacagaattcgtcctaggtgtaaacacgtaagttgtaggtatggatgtta 23709124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 1e-49; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 22050511 - 22050626
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22050511 tttttctgatttttcttttcatctctgccccaaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtagg 22050610  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  22050611 tatggatgttagcttt 22050626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 29298922 - 29298807
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29298922 tttttatgatttttcttttcatctctgcaccgaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtagg 29298823  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  29298822 tatggatgttagcttt 29298807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 31613239 - 31613129
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  31613239 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatatggtattgataggttcataattggtcttaggtgtaaacacgaaagttgtagg 31613140  T
Q  102 tatgcatgtta 112  Q
    |||| ||||||    
T  31613139 tatggatgtta 31613129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 22122495 - 22122611
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacac-gaaagttgtag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||    
T  22122495 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacactaaaagttgtag 22122594  T
Q  101 gtatgcatgttaacttt 117  Q
    ||||| |||||| ||||    
T  22122595 gtatggatgttagcttt 22122611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 43543389 - 43543274
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||||||||||||||||    
T  43543389 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtagg 43543290  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  43543289 tatggatgttagcttt 43543274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 16274746 - 16274852
Alignment:
Q  11 tttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgt 110  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  16274746 tttttcttttcatctctgccccgaatttgaaatggaatctggtgttgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgt 16274845  T
Q  111 taacttt 117  Q
    || ||||    
T  16274846 tagcttt 16274852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 40129572 - 40129462
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| |||||||||||    
T  40129572 tttttatgatttttcttttcatctctgccccgaatttgaaatgaaatatggtattgataggtccagaattgatcttaggtgtaaacactaaagttgtagg 40129473  T
Q  102 tatgcatgtta 112  Q
    |||| ||||||    
T  40129472 tatgaatgtta 40129462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 29777421 - 29777306
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| ||| || |||| ||||||||||||||||| |||||||||||    
T  29777421 tttttctgatttttcttttcatctctgccctgaatttgaaataaaaactggtattgatcggtacagaattagtcttaggtgtaaacacaaaagttgtagg 29777322  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  29777321 tatgtatgttagcttt 29777306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 9044679 - 9044789
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||| |||||||||||||||||||||| |||||||||| ||| ||||||||||| ||| || |||| |||||||||||||||||||||||||||||    
T  9044679 tttttctgttttttcttttcatctctgccccaaatttgaaataaaaactggtattgatcggtacagaattagtcttaggtgtaaacacgaaagttgtagg 9044778  T
Q  102 tatgcatgtta 112  Q
    |||| ||||||    
T  9044779 tatgtatgtta 9044789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 15859476 - 15859592
Alignment:
Q  2 tttttctgatttt-tcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtag 100  Q
    ||||||||||||| |||||||||||||  |||||||||||||| ||| ||||||||||| ||| || ||||||||||||||||| |||||||||||||||    
T  15859476 tttttctgattttttcttttcatctctatcccgaatttgaaataaaaactggtattgattggtacagaattggtcttaggtgtatacacgaaagttgtag 15859575  T
Q  101 gtatgcatgttaacttt 117  Q
    ||||| |||||| ||||    
T  15859576 gtatgaatgttagcttt 15859592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 16401595 - 16401487
Alignment:
Q  9 gatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcat 108  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||||||||||| ||| || ||||||||||||||||| |||| ||||||||||||||| ||    
T  16401595 gatttttcttttcatctctgctccgaatttgaaataaaaactggtattgatcggtacagaattggtcttaggtgtagacacaaaagttgtaggtatggat 16401496  T
Q  109 gttaacttt 117  Q
    |||| ||||    
T  16401495 gttagcttt 16401487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 21841225 - 21841139
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  21841225 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 21841139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 22122718 - 22122792
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatg 105  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  22122718 ccgaatttgaaatgaaaactggtattgataggtccagaattggtcttaggtgtaaacatgaaagttgtaggtatg 22122792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 29298699 - 29298614
Alignment:
Q  32 cgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  29298699 cgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 29298614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 43630263 - 43630344
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgt 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| || ||||||||| ||||||    
T  43630263 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatatggtattgattggtacagaattggtctcaggtgt 43630344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 27161292 - 27161376
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| | ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  27161292 gaatttgaaatgaaaacaggtattgattggtacaaaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 27161376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 13989324 - 13989238
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  13989324 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 13989238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 16274959 - 16275045
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||| ||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  16274959 ccgaattggaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 16275045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 21922995 - 21923081
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  21922995 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 21923081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 29777199 - 29777113
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||| |||||| ||||    
T  29777199 ccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaatcacgaaagttgtaggtatggatgttagcttt 29777113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 31612824 - 31612738
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| |  |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  31612824 ccgaatttgaaatgaaaactggtattgattggtaccgaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 31612738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 15859712 - 15859793
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||| ||||||    
T  15859712 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaagcacgaaagttgtaggtatggatgtta 15859793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 27161099 - 27161183
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||| ||| | ||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||| ||||    
T  27161099 gaatttgaaatggaatatagtattgataggtccagaattggtcttaggtgtaaacaggaaagttgtaggtatggatgttagcttt 27161183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 13227322 - 13227236
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||||||||||| || ||||| |||||| ||||    
T  13227322 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttttatgtatggatgttagcttt 13227236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 16362377 - 16362303
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatg 105  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||| |||||||||||||||||||||||||||    
T  16362377 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttgggtgtaaacacgaaagttgtaggtatg 16362303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 29535510 - 29535424
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||| ||||||||||||||||| ||||| |||||| ||||    
T  29535510 ccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtataaacacgaaagttgtatgtatggatgttagcttt 29535424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 21474790 - 21474876
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||| |||||||||| | ||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  21474790 ccgaatatgaaatgaaaaccggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 21474876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 23593437 - 23593523
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||| |||||||||||| ||||||||||| ||| || |||| |||||||||||||||| |||||||||||||||| |||||| ||||    
T  23593437 ccgagtttgaaatgaaaactggtattgattggtgcataattagtcttaggtgtaaacaagaaagttgtaggtatgtatgttagcttt 23593523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 31613015 - 31612943
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatg 105  Q
    ||||||||| ||||| ||||||||||| |||  | |||||||||||||||||||||| |||||| ||||||||    
T  31613015 gaatttgaactgaaaactggtattgattggtatagaattggtcttaggtgtaaacactaaagttataggtatg 31612943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 10812709 - 10812778
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtag 100  Q
    ||||||||||||| ||| ||||||||||| ||| |  ||||| ||||||||||||||| |||||| ||||    
T  10812709 ccgaatttgaaattaaaactggtattgatcggtactgaattgatcttaggtgtaaacatgaaagtcgtag 10812778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 16401381 - 16401315
Alignment:
Q  30 cccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagtt 96  Q
    |||||||||||||||||| ||||||||| | ||| |||||||||  ||  ||||||||| |||||||    
T  16401381 cccgaatttgaaatgaaaactggtattggtcggtacaaaattggcatttagtgtaaacatgaaagtt 16401315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 8e-48; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 23992910 - 23992802
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23992910 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatccggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtagg 23992811  T
Q  102 tatgcatgt 110  Q
    |||| ||||    
T  23992810 tatggatgt 23992802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 18914806 - 18914704
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  18914806 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataagtccagaattggtcttaggtgtaaacacgaaagttgtagg 18914707  T
Q  102 tat 104  Q
    |||    
T  18914706 tat 18914704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 34963861 - 34963746
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||| ||||||||||||    
T  34963861 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacatgaaagttgtagg 34963762  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  34963761 tatggatgttagcttt 34963746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 25535895 - 25535780
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||  | ||||||||||||||||||||||||||||||||||    
T  25535895 tttttctgatttttcttttcatctttgccccgaatttgaaatgaaaactggtattgattggtagagaattggtcttaggtgtaaacacgaaagttgtagg 25535796  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  25535795 tatggatgttagcttt 25535780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 31630022 - 31630137
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || || | |||||||||||||||||||||||||||||||     
T  31630022 tttttctgatttttcttttcatctctgccccgaatttaaaatgaaatctggtattgataagtacatagttggtcttaggtgtaaacacgaaagttgtagt 31630121  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  31630122 tatggatgttagcttt 31630137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 1598930 - 1598815
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||| || |||||||||  |||||||||||    
T  1598930 tttttctgatttttcttttcatctctaccccgaatttgaaatgaaaactggtattgataggtccagaattggtcataagtgtaaacattaaagttgtagg 1598831  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  1598830 tatggatgttagcttt 1598815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 19005832 - 19005717
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||  || || |||||||||||||||||||||| |||||||||||    
T  19005832 tttttatgatttttcttttcatctctgccccgaatttgaaatgaaatttggtattgattagtacagaattggtcttaggtgtaaacacaaaagttgtagg 19005733  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  19005732 tatggatgttagcttt 19005717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 19847453 - 19847568
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| || |||||||| ||||| |||||||||||||||||||    
T  19847453 tttttctgatttttcttttcatctctgccccaaatttgaaatgaaaactggtattgattggtacataattggtcctaggtataaacacgaaagttgtagg 19847552  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  19847553 tatggatgttagcttt 19847568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 19847675 - 19847750
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgc 106  Q
    ||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  19847675 ccgaatttgaaatgaaaactggtattgattggtacaaaattggtcttaggtgtaaacacgaaagttgtaggtatgc 19847750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 1598515 - 1598429
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  1598515 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 1598429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 25689154 - 25689068
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  25689154 ccgaatttgaaatgaaaactggtattgattggtacaaaattggtcttaggtgtaaacacaaaagttgtaggtatggatgttagcttt 25689068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 30676200 - 30676306
Alignment:
Q  11 tttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgt 110  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||  ||| || |||||||||||||||  || || ||||||||||||||| ||||    
T  30676200 tttttcttttcatctctgccccgaatttgaaatgaaaactggtattgaatggtacataattggtcttaggtgataagactaaagttgtaggtatggatgt 30676299  T
Q  111 taacttt 117  Q
    || ||||    
T  30676300 tagcttt 30676306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 30676413 - 30676499
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  30676413 ccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 30676499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 8055488 - 8055402
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  8055488 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 8055402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 15892112 - 15892186
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatg 105  Q
    ||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||    
T  15892112 ccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatg 15892186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 18334296 - 18334382
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  18334296 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 18334382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 18914391 - 18914305
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| |||||||| || ||| || ||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  18914391 ccgaatttgaaatgaaaactggtatttattggtacataattggtcttaggggtaaacacgaaagttgtaggtatggatgttaacttt 18914305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 24423005 - 24422919
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  24423005 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 24422919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 33862252 - 33862166
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  33862252 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 33862166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 33864736 - 33864650
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  33864736 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 33864650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 23415423 - 23415342
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    ||||||||||||||||| ||||||||||| ||| || |||| ||||||||||||||||||||||||||||||||| ||||||    
T  23415423 ccgaatttgaaatgaaaactggtattgattggtacagaatttgtcttaggtgtaaacacgaaagttgtaggtatggatgtta 23415342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 1871 - 1954
Alignment:
Q  34 aatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||| ||||||||||| ||| || ||||||||||||||||| |||||||||||||||||||| |||||| ||||    
T  1871 aatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtacacacgaaagttgtaggtatggatgttagcttt 1954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 8830 - 8913
Alignment:
Q  34 aatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||| ||||||||||| ||| || ||||||||||||||||| |||||||||||||||||||| |||||| ||||    
T  8830 aatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtacacacgaaagttgtaggtatggatgttagcttt 8913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 17883203 - 17883282
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||| ||||||||||||||||||||||||||| ||||||    
T  17883203 gaatttgaaatgaaaactggtattgattggtacagaattggtctttggtgtaaacacgaaagttgtaggtatggatgtta 17883282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 1598708 - 1598622
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || || ||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  1598708 ccgaatttgaaatgaaaactggtattgattggtacataaatggtcttaggtataaacacgaaagttgtaggtatggatgttagcttt 1598622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 2290884 - 2290970
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||||||||||||||| |||  |||||| ||||    
T  2290884 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtagatataaatgttagcttt 2290970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 12742776 - 12742690
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| |||  | |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  12742776 ccgaatttgaaatgaaaactggtattgattggtatagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 12742690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 26924344 - 26924430
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| || |||||||| ||| || ||||| |||||||||||||||||||||||||||||||| |||||| ||||    
T  26924344 ccgaatttgaaatgaaaactagtattgattggtacagaattgttcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 26924430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 27557181 - 27557095
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||| ||||||| ||| || ||||||||||||||||||||| |||||||||||||||| |||||| ||||    
T  27557181 ccgaatttgaaatgaaaactgctattgattggtacataattggtcttaggtgtaaacatgaaagttgtaggtatggatgttagcttt 27557095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 25737101 - 25737028
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtat 104  Q
    ||||||||||||||||| ||||||||||| ||| || |||| ||||||||||||||||||||||||||||||||    
T  25737101 ccgaatttgaaatgaaaactggtattgattggtacagaattcgtcttaggtgtaaacacgaaagttgtaggtat 25737028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 31630244 - 31630317
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtat 104  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||| ||||||||||    
T  31630244 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaatttgtaggtat 31630317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 28289042 - 28289126
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| ||||||||||| ||| || ||||||||| |||||||||||| ||||||||||||||| |||||| ||||    
T  28289042 gaatttgaaatgaaaactggtattgattggtacataattggtctcaggtgtaaacacaaaagttgtaggtatggatgttagcttt 28289126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 19858626 - 19858705
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgt 110  Q
    ||||||||||||||||| ||||||||||| ||| || ||||| |||||||||||||||| ||||||||||||||| ||||    
T  19858626 ccgaatttgaaatgaaaactggtattgattggtacataattgatcttaggtgtaaacacaaaagttgtaggtatgaatgt 19858705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 1540615 - 1540701
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||| || ||||||||||| |||  | |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  1540615 ccgaatttgaaatgcaaactggtattgattggtatagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 1540701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 12942646 - 12942580
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgta 99  Q
    ||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||||||||||||||    
T  12942646 gaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgta 12942580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 19005610 - 19005524
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||| ||||||||||||||||| ||| ||||||||||| |||||| ||||    
T  19005610 ccgaatttgaaatgaaaactggtattgattggtacataattagtcttaggtgtaaacacaaaaattgtaggtatggatgttagcttt 19005524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 18914584 - 18914510
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatg 105  Q
    |||||||| |||| ||  ||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||    
T  18914584 ccgaattttaaattaatactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatg 18914510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 25688961 - 25688875
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||| ||| |||||||| || ||| |  |||||||||||| ||||||||||||||||||||||||| |||||| ||||    
T  25688961 ccgaatttgaaatcaaaactggtatttattggtaccgaattggtcttagctgtaaacacgaaagttgtaggtatggatgttagcttt 25688875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 17028025 - 17028070
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaa 47  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  17028025 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaa 17028070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 79 - 157
Alignment:
Q  34 aatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    ||||| |||||||| ||||||||||   || |||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  79 aatttaaaatgaaaactggtattgagttgtacaaaattggtcttaggtgtatacacgaaagttgaaggtatggatgtta 157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 22782685 - 22782599
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||||||  ||||||| || ||| || ||||||||||||||||||  | |||||||||||||||| |||||| ||||    
T  22782685 ccgaatttgaaatgaaaaatggtattaattggtacagaattggtcttaggtgtaagtaggaaagttgtaggtatgaatgttagcttt 22782599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 26924151 - 26924237
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||| | ||| |||||||||| |||||||||||||||  |||||| ||||    
T  26924151 ccgaatttgaaatgaaaactggtattgattggtacagaattagcctttggtgtaaacatgaaagttgtaggtataaatgttagcttt 26924237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 9020 - 9085
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagtt 96  Q
    |||||||| |||||||| |||||| |||| ||| || |||||||||||||||||||||||||||||    
T  9020 ccgaattttaaatgaaaactggtaatgattggtacagaattggtcttaggtgtaaacacgaaagtt 9085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 17377588 - 17377637
Alignment:
Q  68 aattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  17377588 aattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 17377637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 102
Target Start/End: Complemental strand, 25689315 - 25689276
Alignment:
Q  63 tccaaaattggtcttaggtgtaaacacgaaagttgtaggt 102  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  25689315 tccagaattggtcttaggtgtaaacacgaaagttgtaggt 25689276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 1576822 - 1576777
Alignment:
Q  184 tcaccactttgacaaatggctcgaacattt--ccccatataatttt 227  Q
    |||||||||||||||||||||| |||||||  ||||||||||||||    
T  1576822 tcaccactttgacaaatggctccaacatttacccccatataatttt 1576777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 501745 - 501630
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||    
T  501745 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtcaagaactggtcttaggtgtaaacacgaaagttgtagg 501646  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  501645 tatggatgttagcttt 501630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 501522 - 501453
Alignment:
Q  32 cgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||  || ||||||| | | || ||||||||||| ||||||||||||||||||||||    
T  501522 cgaatttgaaatgaaaagtgatattgattgttacagaattggtcttatgtgtaaacacgaaagttgtagg 501453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 3e-47; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 32810384 - 32810269
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32810384 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctaatattgataggtccagaattggtcttaggtgtaaacacgaaagttgtagg 32810285  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  32810284 tatggatgttagcttt 32810269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 19897195 - 19897085
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  19897195 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttagctgtaaatacaaaagttgtagg 19897096  T
Q  102 tatgcatgtta 112  Q
    |||| ||||||    
T  19897095 tatgaatgtta 19897085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 15202467 - 15202582
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  15202467 tttttctgatttttcttttcatctctaccccgaatttgaaatgaaatctggtattgatagatccagaattggtcttaggtgtaaacacaaaagttgtagg 15202566  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  15202567 tatggatgttagcttt 15202582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 24049291 - 24049176
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  24049291 tttttatgatttttcttttcatctctgccccgaatttgaaatgaaatatggtattgataggtccagaattggtcttaggtgtaaacacgaaagttatagg 24049192  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  24049191 tatggatgttagcttt 24049176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 27471898 - 27472013
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  27471898 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaaactgatattgattggtacaaaattggtcttaggtgtaaacacgaaagttgtagg 27471997  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  27471998 tatggatgttagcttt 27472013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 38549294 - 38549409
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |    
T  38549294 tttttctgatttttcttttcatctctcccccgaatttgaaatgaaatctggtattgataggtacagaattggtcttaggtgtaaacacgaaagttgtatg 38549393  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  38549394 tatggatgttagcttt 38549409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 32122409 - 32122294
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||  | ||||||||||||||||||||||||||||||||||    
T  32122409 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaaactggtattgattggtatagaattggtcttaggtgtaaacacgaaagttgtagg 32122310  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  32122309 tatggatgttagcttt 32122294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 1326606 - 1326721
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| || ||||||||||| ||||||| ||||||||||||||    
T  1326606 tttttctgatttttcttttcatctttgccccgaatttgaaatgaaatctggtattgattggtacagaattggtcttaagtgtaaaaacgaaagttgtagg 1326705  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  1326706 tatgaatgttatcttt 1326721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 16412797 - 16412912
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||| ||| || || |||||||||||||||||||||||||||||||    
T  16412797 tttttctgatttttcttttcatctctgccgcgaatttgaaatgaaaattggtattgattggtacagaactggtcttaggtgtaaacacgaaagttgtagg 16412896  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  16412897 tatggatgttagcttt 16412912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 19936390 - 19936492
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||     
T  19936390 tttttctgatttttcttttta-ctctgccccgaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacatgaaagttgtagc 19936488  T
Q  102 tatg 105  Q
    ||||    
T  19936489 tatg 19936492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 20403960 - 20403845
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| | | || |||||||||||||||||||||| |||||||||||    
T  20403960 tttttcttatttttcttttcatctctgccccgaatttgaaatgaaaactggtattgattgctacataattggtcttaggtgtaaacacaaaagttgtagg 20403861  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  20403860 tatgaatgttagcttt 20403845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 11361198 - 11361082
Alignment:
Q  2 tttttctgatttttcttttc-atctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtag 100  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||| ||| ||||||    
T  11361198 tttttctgattttttttttccatctctgccccgaatttgaaatgaaatctagtattgataggtgcataattggtcttaggtgtaaacacaaaacttgtag 11361099  T
Q  101 gtatgcatgttaacttt 117  Q
    ||||| |||||| ||||    
T  11361098 gtatggatgttagcttt 11361082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 15071241 - 15071126
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||  | ||||| ||||||| ||||||||||||||||||||    
T  15071241 tttttctgatttttcttttcatctctgccccgaatttgaaataaaaactggtattgatcggtaaagaattgatcttaggggtaaacacgaaagttgtagg 15071142  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  15071141 tatggatgttagcttt 15071126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 16401243 - 16401328
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||| ||||    
T  16401243 ccgaatttgaaatgaaatctggtattgataggtccagaattggt-ttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 16401328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 19896973 - 19896887
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||| |||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  19896973 ccgaattttaaatgaaaactggtattgattggtacaaaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 19896887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 19936611 - 19936692
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| ||||||    
T  19936611 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 19936692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 45290252 - 45290337
Alignment:
Q  32 cgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  45290252 cgaatttgaaatgaaaactggtattgattggtacaaaattggtcttaggtgtaaacacaaaagttgtaggtatggatgttagcttt 45290337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 1484860 - 1484774
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  1484860 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 1484774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 4542077 - 4542163
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  4542077 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 4542163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 5852996 - 5853082
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  5852996 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 5853082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 14397444 - 14397530
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||||||||| |||||||||| |||||| ||||    
T  14397444 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagctgtaggtatgaatgttagcttt 14397530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 14409148 - 14409234
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  14409148 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 14409234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 14824233 - 14824147
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| |||  | |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  14824233 ccgaatttgaaatgaaaactggtattgattggtatagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 14824147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 15071019 - 15070933
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  15071019 ccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtataaacacgaaagttgtaggtatggatgttagcttt 15070933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 15202689 - 15202775
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||| ||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  15202689 ccgaatttgaaatgaaaactgatattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 15202775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 24485747 - 24485833
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  24485747 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttgggtgtaaacacgaaagttgtaggtatgaatgttagcttt 24485833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 16413019 - 16413100
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||| ||||||||||||| ||||||    
T  16413019 ccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgacagttgtaggtatggatgtta 16413100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 15202882 - 15202968
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||| |||| ||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  15202882 ccgaatttgaaacgaaaactggtattgattggtacagaattggtcttaggtgtaaacacaaaagttgtaggtatgaatgttagcttt 15202968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 16198353 - 16198279
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatg 105  Q
    ||||||||||||| ||| ||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||    
T  16198353 ccgaatttgaaataaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatg 16198279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 18677768 - 18677854
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||| |||||||| ||||||||||| ||| || |||||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  18677768 ccgaattttaaatgaaaactggtattgattggtacataattggtcttaggtataaacacgaaagttgtaggtatggatgttagcttt 18677854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 20403738 - 20403652
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| | | || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  20403738 ccgaatttgaaatgaaaactggtattgattgatacagaattggtcttaggtgtaaacacgaaagttgtaggtattaatgttagcttt 20403652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 24049069 - 24048983
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||| ||| ||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  24049069 ccgaatttgaaataaaaactggtattgattggtacataattggtcttaggtgtaaacacaaaagttgtaggtatggatgttagcttt 24048983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 20045899 - 20045972
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtat 104  Q
    ||||||||||||| ||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||    
T  20045899 ccgaatttgaaataaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 20045972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 27472120 - 27472201
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    |||| |||||||||||| ||||||||||| ||| || |||||||||||| ||||||||||||||||||||||||| ||||||    
T  27472120 ccgagtttgaaatgaaaactggtattgattggtacataattggtcttagctgtaaacacgaaagttgtaggtatggatgtta 27472201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 38549708 - 38549789
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    ||||||||||||||||||||||||||||| |||  | |||||||||||||| ||||||| ||||||||||||||| ||||||    
T  38549708 ccgaatttgaaatgaaatctggtattgattggtaaagaattggtcttaggtataaacacaaaagttgtaggtatggatgtta 38549789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 16401437 - 16401521
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||| || ||||||||||| ||| |  |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  16401437 gaatttgaaatgcaaactggtattgattggtacgtaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 16401521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 19896780 - 19896694
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||| |||||||| ||||||||||| |||  | |||||||||||||||||||||||||| ||||||||||| || ||||||||    
T  19896780 ccgaattttaaatgaaaactggtattgattggtagagaattggtcttaggtgtaaacacgaaaattgtaggtatgaattttaacttt 19896694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 22002211 - 22002125
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||| ||||||| ||| || ||||||||||||||||||||| |||||||||||||||  |||||| ||||    
T  22002211 ccgaatttgaaatgaaaactgatattgattggtacagaattggtcttaggtgtaaacatgaaagttgtaggtataaatgttagcttt 22002125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 16401628 - 16401701
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtat 104  Q
    ||||||||||||||||| ||| ||||||| | | || |||||||||||||||||||||||||||||||||||||    
T  16401628 ccgaatttgaaatgaaaactgatattgattgatacataattggtcttaggtgtaaacacgaaagttgtaggtat 16401701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 4483733 - 4483653
Alignment:
Q  37 ttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||| |||||||| || ||| || |||||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  4483733 ttgaaatgaaaactggtatttattggtacataattggtcttaggtataaacacgaaagttgtaggtatggatgttagcttt 4483653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 118
Target Start/End: Original strand, 38549515 - 38549602
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaactttt 118  Q
    |||||||| |||||||| ||||||||||| ||| || ||||| |||||||| |||||||| |||||||||||||| |||||| |||||    
T  38549515 ccgaatttaaaatgaaaactggtattgattggtacagaattgatcttaggtataaacacggaagttgtaggtatggatgttagctttt 38549602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 32122187 - 32122101
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||| || ||| ||||||| ||| || ||||| ||||||||||||||||||| |||||||||||| |||||| ||||    
T  32122187 ccgaatttgaaatgtaaactgatattgattggtacagaattgttcttaggtgtaaacacgaatgttgtaggtatggatgttagcttt 32122101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 37609883 - 37609936
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtatt 56  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  37609883 tttttcttatttttcttttcatctctgccc-gaatttgaaatgaaatctggtatt 37609936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 45290385 - 45290431
Alignment:
Q  71 tggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  45290385 tggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 45290431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 25657893 - 25657942
Alignment:
Q  68 aattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||| |||||||||| |||||||||||||||| |||||| ||||    
T  25657893 aattggtctttggtgtaaacatgaaagttgtaggtatggatgttagcttt 25657942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 1934 - 1820
Alignment:
Q  3 ttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggt 102  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  1934 ttttctgatttttcttttcatctctgccctgaatttgaaatgaaatctggtattgataggtccagaattggtcttaggtgtaaacaagaaagttgtaggt 1835  T
Q  103 atgcatgttaacttt 117  Q
    ||| |||||| ||||    
T  1834 atggatgttagcttt 1820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 1713 - 1634
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgt 110  Q
    |||||||||||||||||  |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  1713 ccgaatttgaaatgaaaattggtattgattggtacaaaattggtcttaggtgtaaacacgaaagttgtaggtatggatgt 1634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 92; Significance: 8e-45; HSPs: 3)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 1389 - 1274
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1389 tttttctgatttttcatttcatctctgccccgaatttgaaatgaaatctcatattgataggtccagaattggtcttaggtgtaaacacgaaagttgtagg 1290  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  1289 tatggatgttagcttt 1274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 1048 - 962
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||| ||| ||||||||||| ||| ||  ||| |||||||| |||||||||||||||||||||||| |||||| ||||    
T  1048 ccgaatttgaaataaaaactggtattgattggtacagcattcgtcttaggagtaaacacgaaagttgtaggtatggatgttagcttt 962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 1223 - 1155
Alignment:
Q  49 ctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  1223 ctggtattgattggtacataattggtcttaggtgtaaacacaaaagttgtaggtatggatgttagcttt 1155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 91; Significance: 3e-44; HSPs: 3)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 43419 - 43305
Alignment:
Q  3 ttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggt 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||    
T  43419 ttttttgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtcaagaattggtcttaggtgtaaacacaaaagttgtaggt 43320  T
Q  103 atgcatgttaacttt 117  Q
    ||| |||||| ||||    
T  43319 atgaatgttagcttt 43305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 43198 - 43112
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| ||   |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  43198 ccgaatttgaaatgaaaactggtattgattggtacatttttggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 43112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 13379 - 13411
Alignment:
Q  80 gtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    |||||||||||||||||||||||||| ||||||    
T  13379 gtgtaaacacgaaagttgtaggtatggatgtta 13411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 18618 - 18503
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||| |||||||||||    
T  18618 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacaaaagttgtagg 18519  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  18518 tatggatgttagcttt 18503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 88; Significance: 2e-42; HSPs: 4)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 15592 - 15490
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||    
T  15592 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattaataggtccagaattggtctta-gtgtaaacacgaaagttgtagg 15494  T
Q  102 tatg 105  Q
    ||||    
T  15493 tatg 15490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 10821 - 10931
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccg-aatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtag 100  Q
    ||||||||| |||| |||||||||| |||||| ||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  10821 tttttctgaatttt-ttttcatctccgccccggaatttgaaatgaaatgtggtattgataggtccagaattggtcttagctgtaaacacgaaagttgtag 10919  T
Q  101 gtatgcatgtta 112  Q
    ||||| ||||||    
T  10920 gtatggatgtta 10931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 11043 - 11124
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    |||||||||||||||||  |||||||||| ||| || |||||||||||||||||||||||||||||||||||||| ||||||    
T  11043 ccgaatttgaaatgaaaattggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 11124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 15342 - 15295
Alignment:
Q  70 ttggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||||| ||||||||||||||||||| |||||| ||||    
T  15342 ttggtcttaggtgtaaccacgaaagttgtaggtatggatgttagcttt 15295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 84; Significance: 5e-40; HSPs: 3)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 1040 - 933
Alignment:
Q  10 atttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatg 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||| |||| |||    
T  1040 atttttcttttcatctctgccccgaatttgaaatgaaatctggtattgattggtacaaaattggtcttaggtgtaaacacaaaagttgtagatatggatg 941  T
Q  110 ttaacttt 117  Q
    ||| ||||    
T  940 ttagcttt 933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 826 - 782
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtc 75  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||    
T  826 ccgaatttgaaatgaaatctggtattgattggtacaaaattggtc 782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 663 - 580
Alignment:
Q  34 aatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||| |||||||| || | |  | |||| |||| |||||||||||| ||||||||||||||  |||||| ||||    
T  663 aatttgaaatgaaaactggtatttattgatatagaattagtctaaggtgtaaacacaaaagttgtaggtatagatgttagcttt 580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 84; Significance: 5e-40; HSPs: 5)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 22860 - 22967
Alignment:
Q  10 atttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatg 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||| |||| |||    
T  22860 atttttcttttcatctctgccccgaatttgaaatgaaatctggtattgattggtacaaaattggtcttaggtgtaaacacaaaagttgtagatatggatg 22959  T
Q  110 ttaacttt 117  Q
    ||| ||||    
T  22960 ttagcttt 22967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 20685 - 20764
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggt 81  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||| || ||||||||||||||    
T  20685 tttttctgatttttcttttcatctctgccccgaattggaaatgaaatctgatattgattggtacagaattggtcttaggt 20764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 14406 - 14320
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||||||| |||||||||||  |||||| ||||    
T  14406 ccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaacgttgtaggtataaatgttagcttt 14320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 23074 - 23118
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtc 75  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||    
T  23074 ccgaatttgaaatgaaatctggtattgattggtacaaaattggtc 23118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 23237 - 23320
Alignment:
Q  34 aatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||| |||||||| || | |  | |||| |||| |||||||||||| ||||||||||||||  |||||| ||||    
T  23237 aatttgaaatgaaaactggtatttattgatatagaattagtctaaggtgtaaacacaaaagttgtaggtatagatgttagcttt 23320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 84; Significance: 5e-40; HSPs: 3)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 10665 - 10550
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||| |||||||||||||| | |||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10665 tttttcttatttttcttttcatgtttgccccaaatttgaactgaaatctggtattgataggtccataattggtcttaggtgtaaacacgaaagttgtagg 10566  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  10565 tatggatgttagcttt 10550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 10248 - 10164
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| || |||||||| ||| ||   |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  10248 gaatttgaaatgaaaactagtattgattggtacagtgttggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 10164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 10441 - 10362
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    |||||| |||||||| ||||||||||| ||| || ||||||||||| |||| ||||||||||||||||||||| ||||||    
T  10441 gaatttaaaatgaaaactggtattgattggtacataattggtcttatgtgtcaacacgaaagttgtaggtatggatgtta 10362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 507 - 398
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |    
T  507 tttttctcatttttcttttcatctatgccccgaatttgaaataaaatctggtattgataggtccagaattggtcttaggtgtaaacacgaaagtcgtacg 408  T
Q  102 tatgcatgtt 111  Q
    |||| |||||    
T  407 tatggatgtt 398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 30692 - 30585
Alignment:
Q  10 atttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatg 109  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||    
T  30692 atttttcttttcatctctgctccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatg 30593  T
Q  110 ttaacttt 117  Q
    ||| ||||    
T  30592 ttagcttt 30585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 30478 - 30392
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||| |||||||||||| ||||||||||| ||| || |||||||||| ||||||||||  ||||||||||||||| |||||| ||||    
T  30478 ccgattttgaaatgaaaactggtattgattggtacagaattggtcttcggtgtaaacattaaagttgtaggtatggatgttagcttt 30392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 79; Significance: 4e-37; HSPs: 2)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 5375 - 5265
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||| ||| || ||||||||||||||||||||| ||||||||||||    
T  5375 tttttctgatttttctattcatctctgccccgaatttgaaatgaaaactgatattgattggtacataattggtcttaggtgtaaacatgaaagttgtagg 5276  T
Q  102 tatgcatgtta 112  Q
    |||| ||||||    
T  5275 tatggatgtta 5265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 5153 - 5067
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  5153 ccgaatttgaaatgaaaactggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 5067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 79; Significance: 4e-37; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 6418 - 6527
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  6418 tttttctgaatttt-ttttcatctccgccccgaatttgaaatgaaatgtggtattgataggtccagaattggtcttagctgtaaacacgaaagttgtagg 6516  T
Q  102 tatgcatgtta 112  Q
    |||| ||||||    
T  6517 tatggatgtta 6527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 6639 - 6720
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    |||||||||||||||||  |||||||||| ||| || |||||||||||||||||||||||||||||||||||||| ||||||    
T  6639 ccgaatttgaaatgaaaattggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 6720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 7132 - 7017
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||  || ||||||| ||| || ||||||||||||||||||||||||||||||||||    
T  7132 tttttctgatttttcttttcatctctgtcccgaatatgaaatgaaaattgctattgattggtacagaattggtcttaggtgtaaacacgaaagttgtagg 7033  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  7032 tatggatgttagcttt 7017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 6910 - 6824
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  6910 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 6824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 72; Significance: 7e-33; HSPs: 3)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 8613 - 8498
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| ||| || ||||||||||| |||||||||| ||||||||||     
T  8613 tttttctaatttttcttttcatctctgccccgaatttgaaatggaaactggtattgattggtacataattggtcttacgtgtaaacacaaaagttgtaga 8514  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  8513 tatggatgttagcttt 8498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 8196 - 8112
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| |||||||||||  || || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  8196 gaatttgaaatgaaaactggtattgattagtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttagcttt 8112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 8391 - 8305
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||| |||||||||| ||||||||||| ||| || || ||||||||||||||||||| |||||||||| |||| |||||| ||||    
T  8391 ccgaatgtgaaatgaaaactggtattgattggtacataactggtcttaggtgtaaacacaaaagttgtagatatggatgttagcttt 8305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 207 - 313
Alignment:
Q  11 tttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgt 110  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||| || || |||||||||||||||||| ||||||| |||||||| ||||    
T  207 tttttcttttcatctctgccccgaatttgaaatgaaaactggtattgattggtacataaatggtcttaggtgtaaacaagaaagttataggtatggatgt 306  T
Q  111 taacttt 117  Q
    || ||||    
T  307 tagcttt 313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 16921 - 17036
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| || |||| || ||||| |  |||||||||||||||||    
T  16921 tttttctgatttttcttttcatctctgccccaaatttgaaatgaaaactggtattgattggtacagaatttgtgttaggggataacacgaaagttgtagg 17020  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  17021 tatggatgttagcttt 17036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 94869 - 94783
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  94869 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 94783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 17143 - 17216
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtat 104  Q
    ||||||||||||||||| || |||||||| |||  | |||||||||||||||||||||||||||||||||||||    
T  17143 ccgaatttgaaatgaaaacttgtattgattggtatagaattggtcttaggtgtaaacacgaaagttgtaggtat 17216  T

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Target: scaffold0042 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 75608 - 75689
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    ||||||||||||||||| || |||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  75608 ccgaatttgaaatgaaaactagtattgattggtacaaaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 75689  T

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Target: scaffold0042; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 43329 - 43359
Alignment:
Q  2 tttttctgatttttcttttcatctctgcccc 32  Q
    |||||||||||||||||||||||||||||||    
T  43329 tttttctgatttttcttttcatctctgcccc 43359  T

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Target: scaffold0695 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 6405 - 6319
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| |||||||| || ||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  6405 ccgaatttgaaatgaaaactggtattcattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgttagcttt 6319  T

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Target: scaffold0134 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 38280 - 38194
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  38280 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtataaatgttagcttt 38194  T

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Target: scaffold0064 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 68420 - 68334
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| |||||||||||||| |||||||||||||||||||| ||||| |||||| ||||    
T  68420 ccgaatttgaaatgaaaactggtattgattggtacaaaattggtcttatgtgtaaacacgaaagttgtatgtatggatgttagcttt 68334  T

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Target: scaffold0051 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 31662 - 31576
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  31662 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtattaatgttagcttt 31576  T

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Target: scaffold0363 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 9700 - 9619
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    ||||||||||||||||| |||||||| || ||| || |||||||||||||||||||||||||||||||||||||| ||||||    
T  9700 ccgaatttgaaatgaaaactggtatttattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 9619  T

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Target: scaffold0200 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 18110 - 18026
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  18110 gaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgttagcttt 18026  T

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Target: scaffold0029 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 11746 - 11662
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||| | ||||||||||| |||||| ||||    
T  11746 gaatttgaaatgaaaactggtattgattggtacaaaattggtcttaggtgtaaacacgatacttgtaggtatggatgttagcttt 11662  T

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Target: scaffold0138 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 33628 - 33549
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||| ||||||    
T  33628 gaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgtta 33549  T

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Target: scaffold0074 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 38330 - 38445
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtagg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||  | ||||||||  ||  | ||||| |||||||  |||||||||||||||||||    
T  38330 tttttctgatttctcttttcatctctgccccgaatttgaaataaaaattagtattgatccgtaaagaattgatcttagggctaaacacgaaagttgtagg 38429  T
Q  102 tatgcatgttaacttt 117  Q
    |||| |||||| ||||    
T  38430 tatggatgttagcttt 38445  T

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Target: scaffold0741 (Bit Score: 55; Significance: 9e-23; HSPs: 3)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 3620 - 3706
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||| |||||||| |||||||||||||||| |||||| ||||    
T  3620 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttagctgtaaacatgaaagttgtaggtatggatgttagcttt 3706  T

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Target: scaffold0741; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 3813 - 3899
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || ||||||||||||||| |||||||||||||||||||||  |||||| ||||    
T  3813 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtggaaacacgaaagttgtaggtattgatgttagcttt 3899  T

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Target: scaffold0741; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 4006 - 4092
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||| |||||||||||| ||||| |||||||||| |||||| ||||    
T  4006 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcataggtgtaaacatgaaaggtgtaggtatggatgttagcttt 4092  T

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Target: scaffold0444 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 13851 - 13765
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||  |||||| ||||    
T  13851 ccgaatttgaaatgaaaactggtattgattggtacagaattggtcttaggtgtaaacacaaaagttgtaggtataaatgttatcttt 13765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 19792 - 19878
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||||||||||| |||  | |||||||||||||||||||| | ||||||||||||||| |||||| ||||    
T  19792 ccgaatttgaaatgaaaactggtattgattggtatagaattggtcttaggtgtaaacgcaaaagttgtaggtatggatgttagcttt 19878  T

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Target: scaffold0117 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 39791 - 39705
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||| ||||||| ||| || |||||||||||||||||||||| |||||||||| |||| |||||| ||||    
T  39791 ccgaatttgaaatgaaaactgatattgattggtacagaattggtcttaggtgtaaacacaaaagttgtagttatggatgttagcttt 39705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 40858 - 40772
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||| ||| ||||||||||| ||| || ||||||||||||||||||||||||||||||||| |||  |||||| ||||    
T  40858 ccgaatttgaaattaaaactggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtagatataaatgttagcttt 40772  T

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Target: scaffold0028 (Bit Score: 51; Significance: 2e-20; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 134669 - 134583
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| |||||||||||  || || ||||||||||| |||||||||||||||||||||||||  |||||| ||||    
T  134669 ccgaatttgaaatgaaaactggtattgattagtacataattggtcttaagtgtaaacacgaaagttgtaggtataaatgttagcttt 134583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 137138 - 137052
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| |||||||||||  || || ||||||||||| |||||||||||||||||||||||||  |||||| ||||    
T  137138 ccgaatttgaaatgaaaactggtattgattagtacataattggtcttaagtgtaaacacgaaagttgtaggtataaatgttagcttt 137052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 139607 - 139521
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| |||||||||||  || || ||||||||||| |||||||||||||||||||||||||  |||||| ||||    
T  139607 ccgaatttgaaatgaaaactggtattgattagtacataattggtcttaagtgtaaacacgaaagttgtaggtataaatgttagcttt 139521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 142076 - 141990
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| |||||||||||  || || ||||||||||| |||||||||||||||||||||||||  |||||| ||||    
T  142076 ccgaatttgaaatgaaaactggtattgattagtacataattggtcttaagtgtaaacacgaaagttgtaggtataaatgttagcttt 141990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 144545 - 144459
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| |||||||||||  || || ||||||||||| |||||||||||||||||||||||||  |||||| ||||    
T  144545 ccgaatttgaaatgaaaactggtattgattagtacataattggtcttaagtgtaaacacgaaagttgtaggtataaatgttagcttt 144459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 7395 - 7479
Alignment:
Q  32 cgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||||| ||||||||||| ||| || |||||||||| ||||||||||| ||||||||||||||| |||||| ||||    
T  7395 cgaatttgaaatgaaa-ctggtattgattggtacagaattggtcttgggtgtaaacacaaaagttgtaggtatggatgttagcttt 7479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 7201 - 7274
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtat 104  Q
    |||||||||||||| |||||||||||||| |||  | |||  ||||||||||||||||||||||||||||||||    
T  7201 ccgaatttgaaatgcaatctggtattgattggtaaagaatatgtcttaggtgtaaacacgaaagttgtaggtat 7274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 3480 - 3396
Alignment:
Q  33 gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||| ||||||||||| | | || ||||| |||||| ||||||||||||||||||||||||| |||||| ||||    
T  3480 gaatttgaaatgaaaactggtattgattgttacataattgttcttagttgtaaacacgaaagttgtaggtatggatgttagcttt 3396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 107156 - 107108
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatct 50  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  107156 tttttctgatttttcttttcatctctgccccgaatttgaaatgaaatct 107108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 21207 - 21120
Alignment:
Q  31 ccgaatttgaaat-gaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||| |||| ||||||||||| ||| || ||||||||||||||||||||| |||||||||||||||  |||||| ||||    
T  21207 ccgaatttgaaatagaaaactggtattgattggtacagaattggtcttaggtgtaaacaagaaagttgtaggtataaatgttagcttt 21120  T

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Target: scaffold0436 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 8477 - 8391
Alignment:
Q  31 ccgaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||| ||| ||||||| |||  | ||||| ||||||||||||||| |||||||||||||||| |||||| ||||    
T  8477 ccgaatttgaaatgaaaactgatattgattggtatagaattgctcttaggtgtaaacatgaaagttgtaggtatggatgttagcttt 8391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 7463 - 7420
Alignment:
Q  4 tttctgatttttcttttcatctctgccccgaatttgaaatgaaa 47  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  7463 tttctgatttttcttttcatctctgccccgaatttgaaatgaaa 7420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 36749 - 36795
Alignment:
Q  71 tggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  36749 tggtcttaggtgtaaacacgaaagttgtaggtatggatgttaacttt 36795  T

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Target: scaffold0151; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 36905 - 36988
Alignment:
Q  34 aatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    |||||||||||||| ||  ||||||| ||   |||||| ||| ||| ||||||||||||||||||||||||| |||||| ||||    
T  36905 aatttgaaatgaaaactaatattgattggaaaaaaattagtcatagatgtaaacacgaaagttgtaggtatggatgttagcttt 36988  T

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Target: scaffold0053 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 60617 - 60575
Alignment:
Q  2 tttttctgatttttcttttcatctctgccccgaatttgaaatg 44  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  60617 tttttctgatttttcttttcatctctgccccgaatttgaaatg 60575  T

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Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 53611 - 53661
Alignment:
Q  67 aaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgttaacttt 117  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||| ||||    
T  53611 aaattggtcttagctgtaaacacgaaagttgtaggtatggatgttagcttt 53661  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 113490 - 113394
Alignment:
Q  17 ttttcatctctgcccc-gaatttgaaatgaaatctggtattgataggtccaaaattggtcttaggtgtaaacacgaaagttgtaggtatgcatgtta 112  Q
    ||||||||||| |||| ||||||||||| ||| ||||||||||| ||| |  | |||| ||| | |||||||| | |||||||||||||| ||||||    
T  113490 ttttcatctctacccccgaatttgaaataaaaactggtattgatcggtgcggatttggcctttgatgtaaacatggaagttgtaggtatggatgtta 113394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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